Cldn14 (claudin 14) - Rat Genome Database

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Gene: Cldn14 (claudin 14) Rattus norvegicus
Analyze
Symbol: Cldn14
Name: claudin 14
RGD ID: 1309165
Description: Predicted to enable structural molecule activity. Predicted to be involved in bicellular tight junction assembly and cell adhesion. Predicted to be located in anchoring junction and lateral plasma membrane. Predicted to be active in bicellular tight junction and plasma membrane. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 29. Orthologous to human CLDN14 (claudin 14); PARTICIPATES IN hepatitis C pathway; INTERACTS WITH 17beta-estradiol; 6-propyl-2-thiouracil; acetamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: claudin-14; LOC304073; MGC109472
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81146,701,940 - 46,799,049 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1146,701,940 - 46,799,096 (-)EnsemblGRCr8
mRatBN7.21133,232,281 - 33,329,440 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1133,232,220 - 33,329,171 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1141,886,839 - 41,896,662 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01134,558,195 - 34,568,023 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01133,708,164 - 33,718,037 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01134,132,581 - 34,142,813 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1134,132,581 - 34,142,753 (-)Ensemblrn6Rnor6.0
Rnor_5.01137,721,801 - 37,732,031 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41134,142,138 - 34,151,928 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1135,202,958 - 35,212,543 (+)NCBICelera
RGSC_v3.11134,198,380 - 34,208,171 (-)NCBI
Cytogenetic Map11q11NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Chronic metabolic acidosis upregulated claudin mRNA expression in the duodenal enterocytes of female rats. Charoenphandhu N, etal., Life Sci. 2007 Mar 2;.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
6. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
7. GOA pipeline RGD automated data pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Comprehensive gene review and curation RGD comprehensive gene curation
11. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
12. Mutations in the gene encoding tight junction claudin-14 cause autosomal recessive deafness DFNB29. Wilcox ER, etal., Cell. 2001 Jan 12;104(1):165-72.
Additional References at PubMed
PMID:16780588   PMID:17130295   PMID:18036336   PMID:33283646   PMID:33903003  


Genomics

Comparative Map Data
Cldn14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81146,701,940 - 46,799,049 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1146,701,940 - 46,799,096 (-)EnsemblGRCr8
mRatBN7.21133,232,281 - 33,329,440 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1133,232,220 - 33,329,171 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1141,886,839 - 41,896,662 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01134,558,195 - 34,568,023 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01133,708,164 - 33,718,037 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01134,132,581 - 34,142,813 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1134,132,581 - 34,142,753 (-)Ensemblrn6Rnor6.0
Rnor_5.01137,721,801 - 37,732,031 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41134,142,138 - 34,151,928 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1135,202,958 - 35,212,543 (+)NCBICelera
RGSC_v3.11134,198,380 - 34,208,171 (-)NCBI
Cytogenetic Map11q11NCBI
CLDN14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382136,460,621 - 36,576,569 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2136,460,616 - 36,576,569 (-)Ensemblhg38GRCh38
GRCh372137,832,919 - 37,948,867 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362136,754,789 - 36,774,258 (-)NCBIBuild 36Build 36hg18NCBI36
Build 342136,754,788 - 36,774,258NCBI
Celera2123,031,290 - 23,147,246 (-)NCBICelera
Cytogenetic Map21q22.13NCBI
HuRef2123,308,758 - 23,424,553 (-)NCBIHuRef
CHM1_12137,394,668 - 37,510,188 (-)NCBICHM1_1
T2T-CHM13v2.02134,843,222 - 34,958,721 (-)NCBIT2T-CHM13v2.0
Cldn14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391693,715,919 - 93,809,733 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1693,715,919 - 93,809,696 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381693,919,031 - 94,008,837 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1693,919,031 - 94,008,837 (-)Ensemblmm10GRCm38
MGSCv371693,919,276 - 94,009,082 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361693,807,573 - 93,897,377 (-)NCBIMGSCv36mm8
Celera1695,007,775 - 95,094,719 (-)NCBICelera
Cytogenetic Map16C4NCBI
cM Map1654.99NCBI
Cldn14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540735,641,560 - 35,728,105 (-)Ensembl
ChiLan1.0NW_00495540735,641,560 - 35,728,105 (-)NCBIChiLan1.0ChiLan1.0
CLDN14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22232,581,439 - 32,601,102 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12127,441,315 - 27,460,976 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02122,830,770 - 22,946,594 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12136,186,950 - 36,206,412 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2136,187,306 - 36,188,025 (-)EnsemblpanPan2panpan1.1
CLDN14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13131,677,410 - 31,725,794 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3131,677,733 - 31,678,446 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3130,738,456 - 30,787,847 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03130,979,723 - 31,029,111 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3130,980,486 - 30,981,199 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13130,847,849 - 30,897,442 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03130,860,674 - 30,910,421 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03131,350,742 - 31,400,174 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Cldn14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440497131,240,241 - 31,336,678 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365006,226,618 - 6,227,337 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365006,207,856 - 6,227,582 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CLDN14
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13200,128,477 - 200,145,525 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.113200,121,796 - 200,201,712 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213210,156,559 - 210,157,513 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CLDN14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1280,457,907 - 80,535,855 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl280,458,270 - 80,458,989 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660548,299,812 - 8,377,996 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cldn14
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474527,058,911 - 27,074,282 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474527,058,441 - 27,074,288 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Cldn14
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1450,723,492 - 50,733,743 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Cldn14
523 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:178
Count of miRNA genes:136
Interacting mature miRNAs:163
Transcripts:ENSRNOT00000002297
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)112252474682951192Rat
1598841Memor7Memory QTL 7exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)113330600878306008Rat
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)114644316891443168Rat
1598842Glom10Glomerulus QTL 103.4kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)11381815448818154Rat
1598811Bp291Blood pressure QTL 2911.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)113330600878306008Rat
634339Niddm50Non-insulin dependent diabetes mellitus QTL 503.32blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)111080612555806125Rat
634341Bw121Body weight QTL 1213.56abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)113532319955805892Rat
8694376Bw156Body weight QTL 1562.250.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)113674945981749459Rat
10755497Bp388Blood pressure QTL 3882.76arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)113294306789836615Rat
724517Uae18Urinary albumin excretion QTL 183.7urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)112995899657754989Rat
2290451Scl58Serum cholesterol level QTL 583.48blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)112631803155806125Rat
1300130Rf20Renal function QTL 204.44kidney glomerulus integrity trait (VT:0010546)kidney glomerulus diameter (CMO:0001166)113191546976915469Rat
10058952Gmadr6Adrenal mass QTL 62.290.0072adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)113642841681428416Rat
1600394Edcs1Endometrial carcinoma susceptibility QTL12.90.04uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)111282315257823152Rat
1558659Tescar1Testicular tumor resistance QTL 13.9testis integrity trait (VT:0010572)percentage of study population developing testis tumors during a period of time (CMO:0001261)113461876079618760Rat
724563Uae10Urinary albumin excretion QTL 106urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)112019354996351019Rat
9589032Epfw10Epididymal fat weight QTL 109.290.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)113674945981749459Rat
9590313Scort20Serum corticosterone level QTL 206.510.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)113674945981749459Rat
8694424Bw162Body weight QTL 1623.80.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)113674945981749459Rat
631510Spl2Serum phospholipid level QTL 24.1blood phospholipid amount (VT:0006084)serum phospholipid level (CMO:0001171)112755668572556685Rat

Markers in Region
D11Got27  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21133,231,846 - 33,232,121 (+)MAPPERmRatBN7.2
Rnor_6.01134,132,151 - 34,132,421NCBIRnor6.0
Rnor_5.01137,721,371 - 37,721,641UniSTSRnor5.0
RGSC_v3.41134,141,707 - 34,141,978RGDRGSC3.4
RGSC_v3.41134,141,708 - 34,141,978UniSTSRGSC3.4
Celera1135,212,703 - 35,212,962UniSTS
RGSC_v3.11134,197,950 - 34,198,221RGD
RH 2.0 Map11400.8RGD
Cytogenetic Map11q11UniSTS
Cldn14  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21133,232,945 - 33,233,190 (+)MAPPERmRatBN7.2
Rnor_6.01134,133,246 - 34,133,490NCBIRnor6.0
Rnor_5.01137,722,466 - 37,722,710UniSTSRnor5.0
RGSC_v3.41134,142,803 - 34,143,047UniSTSRGSC3.4
Celera1135,211,634 - 35,211,878UniSTS
Cytogenetic Map11q11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
6 1 18 61 71 69 55 7 55 5 154 45 7 50 47 40 14 1 1

Sequence


Ensembl Acc Id: ENSRNOT00000002297   ⟹   ENSRNOP00000002297
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1146,701,940 - 46,711,738 (-)Ensembl
mRatBN7.2 Ensembl1133,232,220 - 33,242,135 (-)Ensembl
Rnor_6.0 Ensembl1134,132,581 - 34,142,753 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000102693   ⟹   ENSRNOP00000095342
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1146,701,950 - 46,799,096 (-)Ensembl
mRatBN7.2 Ensembl1133,232,309 - 33,329,171 (-)Ensembl
RefSeq Acc Id: NM_001013429   ⟹   NP_001013447
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81146,701,940 - 46,711,738 (-)NCBI
mRatBN7.21133,232,281 - 33,242,079 (-)NCBI
Rnor_6.01134,132,581 - 34,142,753 (-)NCBI
Rnor_5.01137,721,801 - 37,732,031 (-)NCBI
RGSC_v3.41134,142,138 - 34,151,928 (-)RGD
Celera1135,202,958 - 35,212,543 (+)RGD
Sequence:
RefSeq Acc Id: XM_006248058   ⟹   XP_006248120
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81146,701,940 - 46,711,687 (-)NCBI
mRatBN7.21133,232,283 - 33,242,028 (-)NCBI
Rnor_6.01134,132,583 - 34,142,703 (-)NCBI
Rnor_5.01137,721,801 - 37,732,031 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006248059   ⟹   XP_006248121
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81146,701,940 - 46,711,899 (-)NCBI
mRatBN7.21133,232,283 - 33,242,240 (-)NCBI
Rnor_6.01134,132,583 - 34,142,813 (-)NCBI
Rnor_5.01137,721,801 - 37,732,031 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039088410   ⟹   XP_038944338
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81146,701,940 - 46,799,049 (-)NCBI
mRatBN7.21133,232,283 - 33,329,440 (-)NCBI
RefSeq Acc Id: NP_001013447   ⟸   NM_001013429
- UniProtKB: Q5BJQ1 (UniProtKB/TrEMBL),   A6KPY6 (UniProtKB/TrEMBL),   A6KPY4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006248121   ⟸   XM_006248059
- Peptide Label: isoform X1
- UniProtKB: Q5BJQ1 (UniProtKB/TrEMBL),   A6KPY6 (UniProtKB/TrEMBL),   A6KPY4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006248120   ⟸   XM_006248058
- Peptide Label: isoform X1
- UniProtKB: Q5BJQ1 (UniProtKB/TrEMBL),   A6KPY6 (UniProtKB/TrEMBL),   A6KPY4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000002297   ⟸   ENSRNOT00000002297
RefSeq Acc Id: XP_038944338   ⟸   XM_039088410
- Peptide Label: isoform X1
- UniProtKB: Q5BJQ1 (UniProtKB/TrEMBL),   A6KPY6 (UniProtKB/TrEMBL),   A6KPY4 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000095342   ⟸   ENSRNOT00000102693

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5BJQ1-F1-model_v2 AlphaFold Q5BJQ1 1-239 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698076
Promoter ID:EPDNEW_R8601
Type:single initiation site
Name:Cldn14_2
Description:claudin 14
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R8602  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01134,142,508 - 34,142,568EPDNEW
RGD ID:13698077
Promoter ID:EPDNEW_R8602
Type:initiation region
Name:Cldn14_1
Description:claudin 14
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R8601  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01134,142,804 - 34,142,864EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309165 AgrOrtholog
BioCyc Gene G2FUF-21783 BioCyc
Ensembl Genes ENSRNOG00000001691 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000002297 ENTREZGENE
  ENSRNOT00000002297.5 UniProtKB/TrEMBL
  ENSRNOT00000102693 ENTREZGENE
  ENSRNOT00000102693.2 UniProtKB/TrEMBL
Gene3D-CATH 1.20.140.150 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7321417 IMAGE-MGC_LOAD
InterPro Claudin UniProtKB/TrEMBL
  Claudin_CS UniProtKB/TrEMBL
  PMP22/EMP/MP20/Claudin UniProtKB/TrEMBL
KEGG Report rno:304073 UniProtKB/TrEMBL
MGC_CLONE MGC:109472 IMAGE-MGC_LOAD
NCBI Gene 304073 ENTREZGENE
PANTHER Claudin UniProtKB/TrEMBL
Pfam PMP22_Claudin UniProtKB/TrEMBL
PhenoGen Cldn14 PhenoGen
PRINTS CLAUDIN UniProtKB/TrEMBL
  CLAUDIN14 UniProtKB/TrEMBL
PROSITE CLAUDIN UniProtKB/TrEMBL
RatGTEx ENSRNOG00000001691 RatGTEx
UniProt A6KPY4 ENTREZGENE, UniProtKB/TrEMBL
  A6KPY6 ENTREZGENE
  Q5BJQ1 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A6KPY6 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-12-06 Cldn14  claudin 14  Cldn14_predicted  claudin 14 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Cldn14_predicted  claudin 14 (predicted)      Symbol and Name status set to approved 70820 APPROVED