Zfp622 (zinc finger protein 622) - Rat Genome Database

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Pathways
Gene: Zfp622 (zinc finger protein 622) Rattus norvegicus
Analyze
Symbol: Zfp622 (Ensembl: Zfp622l1)
Name: zinc finger protein 622 (Ensembl:zinc finger protein 622 like 1)
RGD ID: 1309146
Description: Predicted to enable preribosome binding activity. Predicted to be involved in several processes, including intrinsic apoptotic signaling pathway in response to oxidative stress; positive regulation of JNK cascade; and ribosomal large subunit biogenesis. Predicted to be located in cytoplasm and nucleus. Predicted to be part of preribosome, large subunit precursor. Orthologous to human ZNF622 (zinc finger protein 622); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: cytoplasmic 60S subunit biogenesis factor ZNF622; liver regeneration-related protein LRRG121; LOC103690028; LOC294846; MGC108936; Znf622
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8278,205,655 - 78,224,888 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl278,066,031 - 78,225,356 (+)EnsemblGRCr8
mRatBN7.2276,479,605 - 76,494,405 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl276,335,609 - 76,493,898 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx283,600,813 - 83,614,642 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0281,722,535 - 81,736,364 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0276,727,805 - 76,741,608 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0278,407,312 - 78,421,152 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl278,407,414 - 78,421,024 (+)Ensemblrn6Rnor6.0
Rnor_6.0 Ensembl278,103,387 - 78,276,927 (+)Ensemblrn6Rnor6.0
Rnor_5.0297,978,551 - 97,992,642 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4277,571,866 - 77,585,706 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera272,188,230 - 72,202,089 (+)NCBICelera
RGSC_v3.1277,500,100 - 77,513,940 (+)NCBI
Cytogenetic Map2q22NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Enhancement of B-MYB transcriptional activity by ZPR9, a novel zinc finger protein. Seong HA, etal., J Biol Chem 2003 Mar 14;278(11):9655-62.
Additional References at PubMed
PMID:12477932   PMID:21771788   PMID:22658674  


Genomics

Comparative Map Data
Zfp622
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8278,205,655 - 78,224,888 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl278,066,031 - 78,225,356 (+)EnsemblGRCr8
mRatBN7.2276,479,605 - 76,494,405 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl276,335,609 - 76,493,898 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx283,600,813 - 83,614,642 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0281,722,535 - 81,736,364 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0276,727,805 - 76,741,608 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0278,407,312 - 78,421,152 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl278,407,414 - 78,421,024 (+)Ensemblrn6Rnor6.0
Rnor_6.0 Ensembl278,103,387 - 78,276,927 (+)Ensemblrn6Rnor6.0
Rnor_5.0297,978,551 - 97,992,642 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4277,571,866 - 77,585,706 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera272,188,230 - 72,202,089 (+)NCBICelera
RGSC_v3.1277,500,100 - 77,513,940 (+)NCBI
Cytogenetic Map2q22NCBI
ZNF622
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38516,451,519 - 16,465,800 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl516,451,518 - 16,465,811 (-)Ensemblhg38GRCh38
GRCh37516,451,628 - 16,465,909 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36516,504,628 - 16,518,894 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34516,504,628 - 16,518,894NCBI
Celera516,475,243 - 16,489,513 (-)NCBICelera
Cytogenetic Map5p15.1NCBI
HuRef516,423,532 - 16,437,805 (-)NCBIHuRef
CHM1_1516,451,589 - 16,465,842 (-)NCBICHM1_1
T2T-CHM13v2.0516,390,866 - 16,405,145 (-)NCBIT2T-CHM13v2.0
Zfp622
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391525,984,452 - 25,998,568 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1525,984,452 - 25,998,567 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381525,984,366 - 25,998,482 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1525,984,366 - 25,998,481 (+)Ensemblmm10GRCm38
MGSCv371525,914,121 - 25,928,237 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361525,929,091 - 25,943,207 (+)NCBIMGSCv36mm8
Celera1526,755,941 - 26,770,057 (+)NCBICelera
Cytogenetic Map15B1NCBI
cM Map159.71NCBI
Znf622
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554265,553,610 - 5,568,646 (-)Ensembl
ChiLan1.0NW_0049554265,554,655 - 5,569,067 (-)NCBIChiLan1.0ChiLan1.0
ZNF622
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2416,683,369 - 16,700,985 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1514,836,979 - 14,854,595 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0516,753,135 - 16,767,378 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1516,591,135 - 16,605,842 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl516,591,135 - 16,605,842 (-)EnsemblpanPan2panpan1.1
ZNF622
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1486,929,947 - 86,943,711 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl486,826,892 - 86,951,542 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha486,447,527 - 86,461,291 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0487,567,057 - 87,580,819 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl487,442,238 - 87,587,920 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1487,089,290 - 87,103,023 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0487,326,254 - 87,340,001 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0488,183,313 - 88,197,085 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Znf622
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213210,156,464 - 210,171,924 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648019,091,502 - 19,108,990 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493648019,092,959 - 19,108,418 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF622
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl165,699,744 - 5,714,516 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1165,699,740 - 5,714,824 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2166,144,037 - 6,159,117 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF622
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1416,131,215 - 16,145,763 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl416,127,777 - 16,145,777 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366606412,333,090 - 12,348,421 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf622
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475113,358,276 - 13,374,239 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462475113,361,474 - 13,374,398 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Znf622
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v13154,817,443 - 154,828,973 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Zfp622
169 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:25
Count of miRNA genes:25
Interacting mature miRNAs:25
Transcripts:ENSRNOT00000066879
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1578777Stresp15Stress response QTL 1520.05blood aldosterone amount (VT:0005346)plasma aldosterone level (CMO:0000551)261556902106556902Rat
631500Bp99Blood pressure QTL 992.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)261051883104684275Rat
10755436Coatc8Coat color QTL 80.02431coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23675034481750344Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)244537979205135428Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)267845370229470703Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)220695736231474293Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)227148328206613235Rat
5684996Bmd85Bone mineral density QTL 854.70.024tibia mineral mass (VT:1000283)bone mineral density (CMO:0001226)261051541105724065Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)227148328206613235Rat
152025242Bw191Body weight QTL 1913.62body mass (VT:0001259)240306867124537199Rat
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)227148328145807373Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)241801363104744824Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)227148328159440891Rat
631208Bw1Body weight QTL15.09mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)24490435585286097Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)24265106205135428Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227148328159440891Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)227148557159440760Rat
1300155Bp174Blood pressure QTL 1744.09arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)244537979112567334Rat
2293835Kiddil5Kidney dilation QTL 53.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)244537979159440891Rat
5684990Bmd82Bone mineral density QTL 822.8tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)261051541105724065Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227148328159440891Rat
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)27605533104774005Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227148328159440891Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)247856345205135428Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)227148328159440891Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)22865266683465677Rat
1359034Bp274Blood pressure QTL 274arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)25126685996266859Rat
1558648Smcn1Smooth muscle cell number QTL 10.039blood vessel smooth muscle cell quantity (VT:0010525)aorta smooth muscle cell count per unit vessel length (CMO:0001646)260861391105861391Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)244537979184731399Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)227148557159440760Rat
1298080Bp163Blood pressure QTL 1630.02arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)267845182205135428Rat
2306903Bp336Blood pressure QTL 3360.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)238426449111295694Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)244537979205135428Rat
2290453Scl55Serum cholesterol level QTL 552.83blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)228652666139067443Rat
152025206Hrtrt23Heart rate QTL 235.98heart pumping trait (VT:2000009)230219200171802126Rat
1354605Rf48Renal function QTL 482.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)276328396209350714Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227148328159440891Rat
152025204Hrtrt22Heart rate QTL 225.6heart pumping trait (VT:2000009)230219200171802126Rat
61371Edpm1Estrogen-dependent pituitary mass QTL 140.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)23686864381868643Rat
1354601Slep1Serum leptin concentration QTL 15.39blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)24490435589904355Rat
1582246Cm60Cardiac mass QTL 605.8heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)23326999678269996Rat
61438Cia7Collagen induced arthritis QTL 74.60.0001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)261051541143746880Rat

Markers in Region
RH134526  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.0938,639,969 - 38,640,187UniSTSRnor5.0
Rnor_5.0297,991,384 - 97,992,496UniSTSRnor5.0
RGSC_v3.4931,985,216 - 31,985,434UniSTSRGSC3.4
RGSC_v3.4277,584,448 - 77,585,560UniSTSRGSC3.4
Celera933,273,459 - 33,273,677UniSTS
Celera272,200,831 - 72,201,943UniSTS
RH 3.4 Map9355.89UniSTS
Cytogenetic Map2q22UniSTS
Cytogenetic Map9q21UniSTS
AU016070  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.0298,108,193 - 98,108,286NCBIRnor5.0
Rnor_5.0938,640,166 - 38,640,259NCBIRnor5.0
RGSC_v3.4931,985,144 - 31,985,236UniSTSRGSC3.4
RGSC_v3.4277,585,540 - 77,585,632UniSTSRGSC3.4
Celera933,273,387 - 33,273,479UniSTS
Celera272,201,923 - 72,202,015UniSTS
Cytogenetic Map9q21UniSTS
Cytogenetic Map2q22UniSTS
REN91033  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.0938,639,945 - 38,640,201UniSTSRnor5.0
Rnor_5.0297,991,360 - 97,992,510UniSTSRnor5.0
RGSC_v3.4931,985,202 - 31,985,458UniSTSRGSC3.4
RGSC_v3.4277,584,424 - 77,585,574UniSTSRGSC3.4
Celera933,273,445 - 33,273,701UniSTS
Celera272,200,807 - 72,201,957UniSTS
Cytogenetic Map9q21UniSTS
Cytogenetic Map2q22UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000063951   ⟹   ENSRNOP00000062258
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl276,335,609 - 76,474,796 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000079455   ⟹   ENSRNOP00000069183
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl276,441,501 - 76,474,802 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000084541   ⟹   ENSRNOP00000075424
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl278,210,994 - 78,223,739 (+)Ensembl
mRatBN7.2 Ensembl276,463,167 - 76,493,898 (+)Ensembl
Rnor_6.0 Ensembl278,407,414 - 78,415,604 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000087109   ⟹   ENSRNOP00000068737
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl278,407,414 - 78,421,024 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000089551   ⟹   ENSRNOP00000073087
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl278,210,871 - 78,224,892 (+)Ensembl
mRatBN7.2 Ensembl276,468,405 - 76,488,847 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000089805   ⟹   ENSRNOP00000075409
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl276,443,711 - 76,474,802 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000120625   ⟹   ENSRNOP00000098260
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl278,066,031 - 78,205,315 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000131844   ⟹   ENSRNOP00000099776
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl278,198,907 - 78,219,343 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000139704   ⟹   ENSRNOP00000112169
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl278,174,210 - 78,205,315 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000147022   ⟹   ENSRNOP00000102093
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl278,198,907 - 78,225,356 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000156171   ⟹   ENSRNOP00000111903
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl278,198,907 - 78,225,356 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000164321   ⟹   ENSRNOP00000100789
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl278,172,134 - 78,205,297 (+)Ensembl
RefSeq Acc Id: NM_001009652   ⟹   NP_001009652
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8278,211,048 - 78,224,888 (+)NCBI
mRatBN7.2276,480,551 - 76,494,393 (+)NCBI
Rnor_6.0278,407,312 - 78,421,152 (+)NCBI
Rnor_5.0297,978,551 - 97,992,642 (+)NCBI
RGSC_v3.4277,571,866 - 77,585,706 (+)RGD
Celera272,188,230 - 72,202,089 (+)RGD
Sequence:
RefSeq Acc Id: XM_063281527   ⟹   XP_063137597
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8278,205,655 - 78,223,739 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001009652 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137597 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH88214 (Get FASTA)   NCBI Sequence Viewer  
  EDL82619 (Get FASTA)   NCBI Sequence Viewer  
  EDL82620 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000073087
  ENSRNOP00000075424
GenBank Protein Q7TM96 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001009652   ⟸   NM_001009652
- UniProtKB: Q5M855 (UniProtKB/TrEMBL),   F1LQ57 (UniProtKB/TrEMBL),   A0A8L2URM4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000075424   ⟸   ENSRNOT00000084541
Ensembl Acc Id: ENSRNOP00000068737   ⟸   ENSRNOT00000087109
Ensembl Acc Id: ENSRNOP00000069183   ⟸   ENSRNOT00000079455
Ensembl Acc Id: ENSRNOP00000073087   ⟸   ENSRNOT00000089551
Ensembl Acc Id: ENSRNOP00000075409   ⟸   ENSRNOT00000089805
Ensembl Acc Id: ENSRNOP00000062258   ⟸   ENSRNOT00000063951
RefSeq Acc Id: XP_063137597   ⟸   XM_063281527
- Peptide Label: isoform X1
- UniProtKB: A6JMX0 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000111903   ⟸   ENSRNOT00000156171
Ensembl Acc Id: ENSRNOP00000100789   ⟸   ENSRNOT00000164321
Ensembl Acc Id: ENSRNOP00000099776   ⟸   ENSRNOT00000131844
Ensembl Acc Id: ENSRNOP00000112169   ⟸   ENSRNOT00000139704
Ensembl Acc Id: ENSRNOP00000098260   ⟸   ENSRNOT00000120625
Ensembl Acc Id: ENSRNOP00000102093   ⟸   ENSRNOT00000147022
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q7TM96-F1-model_v2 AlphaFold Q7TM96 1-386 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309146 AgrOrtholog
BioCyc Gene G2FUF-53937 BioCyc
Ensembl Genes ENSRNOG00000010589 Ensembl, ENTREZGENE
  ENSRNOG00000059443 Ensembl
Ensembl Transcript ENSRNOT00000084541 ENTREZGENE
  ENSRNOT00000089551 ENTREZGENE
Gene3D-CATH Classic Zinc Finger UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7383802 IMAGE-MGC_LOAD
InterPro Matrin/U1-like-C_Znf_C2H2 UniProtKB/Swiss-Prot
  ZN622/Rei1/Reh1_Znf-C2H2 UniProtKB/Swiss-Prot
  Znf622/Rei1/Reh1 UniProtKB/Swiss-Prot
  Znf_C2H2_jaz UniProtKB/Swiss-Prot
  Znf_C2H2_sf UniProtKB/Swiss-Prot
  Znf_C2H2_type UniProtKB/Swiss-Prot
MGC_CLONE MGC:108936 IMAGE-MGC_LOAD
NCBI Gene 294846 ENTREZGENE
PANTHER PTHR13182 UniProtKB/Swiss-Prot
  ZINC FINGER PROTEIN 622 UniProtKB/Swiss-Prot
Pfam zf-C2H2_2 UniProtKB/Swiss-Prot
  zf-C2H2_jaz UniProtKB/Swiss-Prot
PhenoGen Zfp622 PhenoGen
RatGTEx ENSRNOG00000010589 RatGTEx
  ENSRNOG00000059443 RatGTEx
SMART ZnF_C2H2 UniProtKB/Swiss-Prot
  ZnF_U1 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF57667 UniProtKB/Swiss-Prot
UniProt A0A8L2URM4 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0L902_RAT UniProtKB/TrEMBL
  A0ABK0LF75_RAT UniProtKB/TrEMBL
  A0ABK0LFX7_RAT UniProtKB/TrEMBL
  A0ABK0LLS1_RAT UniProtKB/TrEMBL
  A0ABK0M859_RAT UniProtKB/TrEMBL
  A6JMX0 ENTREZGENE, UniProtKB/TrEMBL
  A6JMX1_RAT UniProtKB/TrEMBL
  F1LQ57 ENTREZGENE
  Q5M855 ENTREZGENE, UniProtKB/TrEMBL
  Q7TM96 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Zfp622  zinc finger protein 622  LOC103690028  zinc finger protein 622  Data merged from RGD:9452233 737654 PROVISIONAL
2014-08-25 LOC103690028  zinc finger protein 622      Symbol and Name status set to provisional 70820 PROVISIONAL
2011-07-19 Zfp622  zinc finger protein 622  Znf622  zinc finger protein 622  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-09-25 Znf622  zinc finger protein 622  Zfp622  zinc finger protein 622  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Zfp622  zinc finger protein 622  Znf622_predicted  zinc finger protein 622 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Znf622_predicted  zinc finger protein 622 (predicted)      Symbol and Name status set to approved 70820 APPROVED