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Gene: Fam168a (family with sequence similarity 168, member A) Rattus norvegicus

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Symbol:

Fam168a

Name:

family with sequence similarity 168, member A

RGD ID:

1308929

Description:

Predicted to be involved in positive regulation of base-excision repair. Orthologous to human FAM168A (family with sequence similarity 168 member A); INTERACTS WITH 17beta-estradiol; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

hypothetical protein LOC361614; LOC361614; RGD1308929

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	164,469,447 - 164,615,542 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	164,469,471 - 164,615,506 (+)	Ensembl				GRCr8
mRatBN7.2	1	155,057,352 - 155,203,439 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	155,057,352 - 155,201,220 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	163,049,242 - 163,186,548 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	170,229,346 - 170,366,652 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	163,107,150 - 163,250,781 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	165,723,278 - 165,880,612 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	165,724,451 - 165,878,652 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	171,925,433 - 172,078,008 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	158,140,473 - 158,287,606 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	153,139,826 - 153,283,021 (+)	NCBI		Celera
RGSC_v3.1	1	158,307,862 - 158,363,937 (+)	NCBI
Cytogenetic Map	1	q32	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Disease Progression (ISO)

Stomach Neoplasms (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP,ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4,4'-sulfonyldiphenol (ISO)

acetamide (EXP)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bortezomib (ISO)

C60 fullerene (EXP)

caffeine (ISO)

cisplatin (ISO)

cyproconazole (ISO)

decabromodiphenyl ether (EXP)

Dibutyl phosphate (ISO)

dibutyl phthalate (EXP,ISO)

dicrotophos (ISO)

dorsomorphin (ISO)

epoxiconazole (ISO)

ethanol (ISO)

ethyl methanesulfonate (ISO)

fenvalerate (EXP)

folic acid (ISO)

furan (EXP)

genistein (ISO)

gentamycin (EXP)

inulin (ISO)

lead(0) (ISO)

LY294002 (ISO)

methapyrilene (EXP)

methidathion (ISO)

methyl methanesulfonate (ISO)

panobinostat (ISO)

paracetamol (EXP)

perfluorohexanesulfonic acid (ISO)

perfluorononanoic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (ISO)

phenobarbital (ISO)

phenylmercury acetate (ISO)

propiconazole (ISO)

resveratrol (ISO)

SB 431542 (ISO)

sodium arsenate (ISO)

sunitinib (ISO)

titanium dioxide (ISO)

trichostatin A (ISO)

triphenyl phosphate (EXP)

triptonide (ISO)

triticonazole (EXP)

troglitazone (ISO)

tungsten (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

positive regulation of base-excision repair (IBA,IEA,ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:25260657

Genomics

Comparative Map Data

Fam168a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	164,469,447 - 164,615,542 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	164,469,471 - 164,615,506 (+)	Ensembl				GRCr8
mRatBN7.2	1	155,057,352 - 155,203,439 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	155,057,352 - 155,201,220 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	163,049,242 - 163,186,548 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	170,229,346 - 170,366,652 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	163,107,150 - 163,250,781 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	165,723,278 - 165,880,612 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	165,724,451 - 165,878,652 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	171,925,433 - 172,078,008 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	158,140,473 - 158,287,606 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	153,139,826 - 153,283,021 (+)	NCBI		Celera
RGSC_v3.1	1	158,307,862 - 158,363,937 (+)	NCBI
Cytogenetic Map	1	q32	NCBI

FAM168A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	73,400,487 - 73,598,112 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	73,400,487 - 73,598,189 (-)	Ensembl			hg38	GRCh38
GRCh37	11	73,111,532 - 73,309,157 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	72,794,676 - 72,986,876 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	11	70,422,420 - 70,614,641 (-)	NCBI		Celera
Cytogenetic Map	11	q13.4	NCBI
HuRef	11	69,412,304 - 69,604,569 (-)	NCBI		HuRef
CHM1_1	11	73,000,621 - 73,192,991 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	73,329,624 - 73,527,246 (-)	NCBI		T2T-CHM13v2.0

Fam168a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	100,355,594 - 100,490,853 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	100,355,842 - 100,490,863 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	7	100,706,628 - 100,841,646 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	100,706,635 - 100,841,656 (+)	Ensembl			mm10	GRCm38
MGSCv37	7	107,855,216 - 107,990,160 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	7	100,580,789 - 100,715,733 (+)	NCBI		MGSCv36	mm8
Celera	7	101,047,855 - 101,192,073 (+)	NCBI		Celera
Cytogenetic Map	7	E2	NCBI
cM Map	7	54.39	NCBI

Fam168a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955414	17,876,904 - 18,071,966 (+)	Ensembl
ChiLan1.0	NW_004955414	17,877,179 - 18,071,977 (+)	NCBI	ChiLan1.0	ChiLan1.0

FAM168A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	74,346,160 - 74,543,163 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	75,390,230 - 75,587,214 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	68,477,579 - 68,674,428 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	71,698,894 - 71,895,781 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	71,698,901 - 71,766,921 (-)	Ensembl			panPan2	panpan1.1

FAM168A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	21	24,644,700 - 24,832,307 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	21	24,768,108 - 24,827,784 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	21	24,410,814 - 24,596,800 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	21	24,851,936 - 25,038,906 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	21	24,852,007 - 25,038,892 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	21	24,645,783 - 24,832,605 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	21	24,846,571 - 25,033,614 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	21	24,761,999 - 24,948,829 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Fam168a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	61,003,368 - 61,184,851 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936498	2,605,788 - 2,670,164 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936498	2,601,341 - 2,784,446 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FAM168A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	7,852,357 - 8,071,812 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	9	7,852,347 - 8,072,011 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	8,516,936 - 8,534,947 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FAM168A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	64,650,781 - 64,844,078 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	64,647,177 - 64,844,097 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666043	61,042,747 - 61,240,522 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fam168a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624817	3,474,230 - 3,550,714 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624817	3,367,402 - 3,553,275 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Fam168a
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	2	99,006,566 - 99,148,664 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Fam168a
745 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	866
Count of miRNA genes:	324
Interacting mature miRNAs:	438
Transcripts:	ENSRNOT00000025827
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61442	Strs1	Sensitivity to stroke QTL 1	7.4		cerebrum integrity trait (VT:0010549)	post-insult time to onset of cerebrovascular lesion (CMO:0002343)	1	131179947	176179947	Rat
1578778	Pur4	Proteinuria QTL 4	3.3	0.003	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	1	160111531	262090437	Rat
1354646	Kidm18	Kidney mass QTL 18	5.7		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	160573753	266453731	Rat
1578780	Cm52	Cardiac mass QTL 52	3.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	1	137611478	182611478	Rat
1578654	Bss10	Bone structure and strength QTL 10	4		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	1	51940904	168768703	Rat
2302378	Insul11	Insulin level QTL 11	3.25		blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	1	153679879	198679879	Rat
1598866	Bp287	Blood pressure QTL 287	5.1		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	130419227	175419227	Rat
1578770	Stresp23	Stress response QTL 23			kidney sympathetic nerve activity (VT:0004050)	stimulated renal sympathetic nerve activity to basal renal sympathetic nerve activity ratio (CMO:0001786)	1	132760429	191848948	Rat
631684	Bp117	Blood pressure QTL 117	8.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	120082258	165082258	Rat
70160	Bw18	Body weight QTL 18	5.7		body mass (VT:0001259)	body weight (CMO:0000012)	1	153679879	205813246	Rat
8694166	Bw147	Body weight QTL 147	6.83	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	1	153788989	198788989	Rat
631199	Cm23	Cardiac mass QTL 23	4.6	0.0004	heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	1	142582336	182383862	Rat
1354636	Lmblg1	Limb length QTL 1	6.4		tibia length (VT:0004357)	tibia length (CMO:0000450)	1	160573753	210707719	Rat
1598850	Bp297	Blood pressure QTL 297	2.1		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	130419227	175419227	Rat
1549837	Hcar15	Hepatocarcinoma resistance QTL 15		0.05	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	162548015	270518180	Rat
152025235	Bw194	Body weight QTL 194	4.86		body mass (VT:0001259)		1	132966869	252856240	Rat
1598853	Memor3	Memory QTL 3	4.5		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	1	152919152	268496042	Rat
61341	Bp26	Blood pressure QTL 26			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	139442053	223964440	Rat
1354634	Kidm12	Kidney mass QTL 12	3.9		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	1	160573753	210707719	Rat
1578759	Uae30	Urinary albumin excretion QTL 30	3.3	0.003	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	160111531	262090437	Rat
61343	Bp28	Blood pressure QTL 28			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	161077990	206077990	Rat
152025232	Bw192	Body weight QTL 192	3.93		body mass (VT:0001259)		1	127329268	206393015	Rat
724521	Uae1	Urinary albumin excretion QTL 1	3.8	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	99645382	182701046	Rat
1358902	Bw47	Body weight QTL 47	1.67		body mass (VT:0001259)	body weight (CMO:0000012)	1	99645382	221502378	Rat
61348	Bp30	Blood pressure QTL 30	2.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	159894717	207261263	Rat
2303622	Vencon6	Ventilatory control QTL 6		0.001	respiration trait (VT:0001943)	respiration rate (CMO:0000289)	1	163992710	208992710	Rat
8655649	Arrd1	Age-related retinal degeneration QTL 1	4.89		retinal layer morphology trait (VT:0003727)	percentage of study population developing retinopathy during a period of time (CMO:0002453)	1	109493780	193400781	Rat
7771612	Cm80	Cardiac mass QTL 80	8.4		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	1	146080545	243492863	Rat
631202	Gluco13	Glucose level QTL 13		0.0001	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	141173126	169168317	Rat
731168	Bp154	Blood pressure QTL 154	3.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	103779152	223964440	Rat
631205	Bp196	Blood pressure QTL 196	4	0.0001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	98879955	208479939	Rat
1300158	Bp173	Blood pressure QTL 173	3.48		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	1	155359438	194575574	Rat
631206	Niddm40	Non-insulin dependent diabetes mellitus QTL 40			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	1	140833106	185833106	Rat
737828	Hcas3	Hepatocarcinoma susceptibility QTL 3	4.9		liver integrity trait (VT:0010547)	liver tumorous lesion volume to total liver volume ratio (CMO:0001082)	1	153679879	232414077	Rat
1354661	Bw33	Body weight QTL 33	5.2		body mass (VT:0001259)	body weight (CMO:0000012)	1	160573753	266453731	Rat
1358886	Bp260	Blood pressure QTL 260	3.67		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	160574007	235238518	Rat
1331751	Bp199	Blood pressure QTL 199	3.60022		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	1	116099376	191260518	Rat
2293140	Bp313	Blood pressure QTL 313			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	131243790	176243790	Rat
724531	Uae5	Urinary albumin excretion QTL 5	4		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	1	160111426	262090599	Rat
737974	Bp161	Blood pressure QTL 161		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	129182274	174182274	Rat
1641895	Bp298	Blood pressure QTL 298			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	132760429	191848948	Rat
70209	Niddm23	Non-insulin dependent diabetes mellitus QTL 23	2.82		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	162753891	207753891	Rat
1354580	Scort1	Serum corticosterone level QTL 1	3.4		blood corticosterone amount (VT:0005345)	blood corticosterone level (CMO:0001172)	1	154961463	266453731	Rat
631496	Bp97	Blood pressure QTL 97	3.08		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	115183611	176289080	Rat
634315	Niddm45	Non-insulin dependent diabetes mellitus QTL 45	7.16		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	1	153680016	182383862	Rat
634314	Niddm44	Non-insulin dependent diabetes mellitus QTL 44			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	51941022	208479811	Rat
61379	Bp44	Blood pressure QTL 44	19.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	153680016	183564652	Rat
1331793	Bp200	Blood pressure QTL 200	3.71601		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	102780511	182384005	Rat
6893347	Bw98	Body weight QTL 98	0.2	0.53	body mass (VT:0001259)	body weight (CMO:0000012)	1	143092939	188092939	Rat
1354591	Cm36	Cardiac mass QTL 36	4.1		heart left ventricle mass (VT:0007031)	calculated heart weight (CMO:0000073)	1	111949780	210707719	Rat
7421630	Bp362	Blood pressure QTL 362		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	128019551	173019551	Rat
70225	Bp58	Blood pressure QTL 58	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34184556	172281316	Rat
10059597	Bp377	Blood pressure QTL 377	3.42	0.025	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34565911	208798288	Rat
631519	Pia11	Pristane induced arthritis QTL 11	5.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	1	93903998	191260518	Rat
6893361	Bw104	Body weight QTL 104	0.59	0.27	body mass (VT:0001259)	body weight (CMO:0000012)	1	143092939	188092939	Rat
724562	Rends1	Renal damage susceptibility QTL 1		0.05	kidney glomerulus integrity trait (VT:0010546)	index of glomerular damage (CMO:0001135)	1	139442053	223964440	Rat
738006	Anxrr14	Anxiety related response QTL 14	4	0.00035	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	1	140048073	185048073	Rat
1558645	Bw55	Body weight QTL 55	3.2	0.004	body mass (VT:0001259)	body weight (CMO:0000012)	1	143092939	188092939	Rat
1354615	Cm32	Cardiac mass QTL 32	5.2		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	1	111949780	210707719	Rat
634348	Bp138	Blood pressure QTL 138			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	135021436	178317588	Rat
1354610	Bw34	Body weight QTL 34	4.1		body mass (VT:0001259)	body weight (CMO:0000012)	1	160573753	266453731	Rat
738028	Anxrr12	Anxiety related response QTL 12	4.9	0.00001	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	1	140048073	185048073	Rat
1354620	Kidm19	Kidney mass QTL 19	4		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	160573753	210707719	Rat
8693608	Alc24	Alcohol consumption QTL 24	2.3	0.74	drinking behavior trait (VT:0001422)	calculated ethanol drink intake rate (CMO:0001615)	1	159863716	177663210	Rat
1576310	Schws2	Schwannoma susceptibility QTL 2		0.029	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	1	153788989	198788989	Rat
631654	Bp107	Blood pressure QTL 107			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	135021436	180021436	Rat
631544	Bp84	Blood pressure QTL 84	5.6		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	132760429	191190115	Rat
152025212	Bw190	Body weight QTL 190	5.7		body mass (VT:0001259)		1	132966869	206393015	Rat
631548	Bp88	Blood pressure QTL 88	5	0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	140915717	185915717	Rat
1358189	Cstrr1	Cold stress response QTL 1		0.0001	catecholamine amount (VT:0010543)	urine norepinephrine level (CMO:0001629)	1	132760429	191848948	Rat
1354606	Bp246	Blood pressure QTL 246	3.6		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	1	111949780	228180370	Rat
1354602	Bw35	Body weight QTL 35	12.2		body mass (VT:0001259)	body weight (CMO:0000012)	1	160573753	210707719	Rat
7411599	Foco11	Food consumption QTL 11	18.5	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	1	153788989	198788989	Rat

Markers in Region

BE098392

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	155,200,624 - 155,200,785 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	165,878,057 - 165,878,217	NCBI	Rnor6.0
Rnor_5.0	1	172,075,554 - 172,075,714	UniSTS	Rnor5.0
RGSC_v3.4	1	158,287,011 - 158,287,171	UniSTS	RGSC3.4
Celera	1	153,282,426 - 153,282,586	UniSTS
RH 3.4 Map	1	1262.3	UniSTS
Cytogenetic Map	1	q32	UniSTS

BE116881

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	155,199,636 - 155,199,843 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	165,877,069 - 165,877,275	NCBI	Rnor6.0
Rnor_5.0	1	172,074,566 - 172,074,772	UniSTS	Rnor5.0
RGSC_v3.4	1	158,286,023 - 158,286,229	UniSTS	RGSC3.4
Celera	1	153,281,438 - 153,281,644	UniSTS
RH 3.4 Map	1	1264.5	UniSTS
Cytogenetic Map	1	q32	UniSTS

BF418822

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	1	164,468,640 - 164,468,852 (+)	Marker Load Pipeline
mRatBN7.2	1	155,056,545 - 155,056,757 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	165,723,645 - 165,723,856	NCBI	Rnor6.0
Rnor_5.0	1	171,924,690 - 171,924,901	UniSTS	Rnor5.0
RGSC_v3.4	1	158,139,667 - 158,139,878	UniSTS	RGSC3.4
Celera	1	153,139,020 - 153,139,231	UniSTS
RH 3.4 Map	1	1262.6	UniSTS
Cytogenetic Map	1	q32	UniSTS

RH134583

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	155,093,553 - 155,093,738 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	165,771,065 - 165,771,249	NCBI	Rnor6.0
Rnor_5.0	1	171,968,922 - 171,969,106	UniSTS	Rnor5.0
RGSC_v3.4	1	158,179,168 - 158,179,352	UniSTS	RGSC3.4
Celera	1	153,175,883 - 153,176,067	UniSTS
RH 3.4 Map	1	1259.7	UniSTS
Cytogenetic Map	1	q32	UniSTS

BI281787

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	155,198,813 - 155,198,963 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	165,876,246 - 165,876,395	NCBI	Rnor6.0
Rnor_5.0	1	172,073,743 - 172,073,892	UniSTS	Rnor5.0
RGSC_v3.4	1	158,285,200 - 158,285,349	UniSTS	RGSC3.4
Celera	1	153,280,615 - 153,280,764	UniSTS
RH 3.4 Map	1	1262.0	UniSTS
Cytogenetic Map	1	q32	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	164	91	90	59	92	59	6	356	192	11	143	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108494	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229773	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589376	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589377	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039082504	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039082510	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039082512	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473956	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000025827 ⟹ ENSRNOP00000025827

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	164,469,543 - 164,615,506 (+)	Ensembl
mRatBN7.2 Ensembl	1	155,057,352 - 155,201,220 (+)	Ensembl
Rnor_6.0 Ensembl	1	165,724,451 - 165,878,652 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000095174 ⟹ ENSRNOP00000086917

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	164,469,471 - 164,609,310 (+)	Ensembl
mRatBN7.2 Ensembl	1	155,057,352 - 155,197,226 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000097710 ⟹ ENSRNOP00000081214

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	164,469,471 - 164,615,506 (+)	Ensembl
mRatBN7.2 Ensembl	1	155,057,352 - 155,201,220 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000106607 ⟹ ENSRNOP00000087972

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	164,469,480 - 164,615,258 (+)	Ensembl
mRatBN7.2 Ensembl	1	155,057,352 - 155,201,220 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000164813 ⟹ ENSRNOP00000109680

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	164,469,613 - 164,615,506 (+)	Ensembl

RefSeq Acc Id:

NM_001108494 ⟹ NP_001101964

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	164,469,447 - 164,613,304 (+)	NCBI
mRatBN7.2	1	155,057,352 - 155,201,220 (+)	NCBI
Rnor_6.0	1	165,724,451 - 165,878,652 (+)	NCBI
Rnor_5.0	1	171,925,433 - 172,078,008 (+)	NCBI
RGSC_v3.4	1	158,140,473 - 158,287,606 (+)	RGD
Celera	1	153,139,826 - 153,283,021 (+)	RGD

Sequence:

show sequence

CCACTGTCGGGTTTCTCCGCGGCTACTGCAGAGGATTCAGATCCGAGTAGCTGAAGAGAAGGAG
GAGGAGGCTCCGGTCCCTGCGCGCCATCCACCACCCTACTGGACACGGACGAGGGAACGAGAGC
GTCGCCGCTGTAGCCTTCAGAGAAGACAAGGGCATCGCCGCTTCTGCTGCCGCCGCCGCGGTTT
TCGTCTGCAGCAGCTCGCCGGATCCTCAGTCTTCCACAATGAACCCCGTTTACAGCCCCGTGCA
ACCTGGGGCTCCTTACGGCAACCCCAAGAACATGGCCTACACTGGTTACCCCACAGCCTACCCG
GCAGCTGCTCCTGCCTACAATCCCAGCCTGTACCCGACCAGCAGCCCCAGTTATGCTCCAGAAT
TTCAGTTCCTGCATTCAGCTTATGCCACTCTGCTGATGAAACAAGCCTGGCCACAGAACTCCTC
TTCCTGTGGCACTGAAGGCACCTTCCACCTCCCAGTGGACACCGGGACGGAGAACCGAACTTAC
CAAGCATCCTCTGCGGCTTTCAGATATACTGCAGGGACACCATACAAGGTCCCACCGACCCAGA
GTAATACTGCTCCACCCCCCTACTCCCCATCACCCAACCCCTATCAGACGGCCATGTATCCAAT
CAGAAGTGCCTATCCCCAGCAGAATCTGTATGCCCAGGGAGCCTACTACACACAGCCTGTGTAT
GCTGCCCAGCCTCATGTCATCCACCACACCACGGTTGTCCAGCCCAACAGCATTCCCTCTGCCA
TCTACCCAGCTCCTGTTGCTGCCCCCAGGACCAATGGTGTGGCCATGGGCATGGTGGCAGGCAC
CACCATGGCAATGTCAGCAGGTACCCTGCTGACCACACCCCAGCACACTGCAATTGGGGCGCAC
CCTGTCTCCATGCCCACTTACAGGGCCCAAGGAACCCCTGCGTATAGCTACGTGCCCCCGCACT
GGTAAAGCCTGCAGCCCATCCACATCTGGAGTCACATTGTATGCAACTACTCGAGTCTTACCTA
CCGGTGCTGAGCGGTCCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAA
GGGTCACTTTATGCATCTTTAATGGTTTTGATTTTTATTTTTGGTTTTTGTAAAAGCTGCTTTT
TCTAATCTCCTAGGAGCCTCCCCTTGTGCCTCCCTCTTAGCCACTGCCCTCCTGGCTCTAGCCC
TTCTTCCTACCTAACCAGGCCCAGTCCTCTCTGCACTTCTTCCCTTCCCTAAGCATCCTGTCCC
TGGGATCCCAGTCTAGTAGCTAGCAGAGAGTGTGGTTTGTTGTGATGGCTCATCAGAGGCTAGA
TTCCTGGGAGAGCAGAACAGAGAGGCCCTCCATGTGGAGTAGGAACTTGGAGCTGTTGAGAAGG
CCTCATCTCTGTCAGACTGTCATTTTCTGAAGCAAGATTAGTTCAGATACAAAGAAATACTTCT
AAGAACCATCACAACAGACCAAGAACAAACCCACCTGGTTATGTAGGAGTGTTAGCAGCTTCAT
GTCCCCAGGCTCAGACCCTGGGAAGACAGAGTTCGGGGAAGGGTGGAGGGAGGGAAGACACTGG
GGAAGTAGTGTGAAGAAGGGCAGGAGGGTGCTCACTCTGGTTTGAAAGGTCTTTGGCTACACCG
CTGGGCCTGGACCTTCTGATTTGCACAGTGATGTTAACTGACCTGGCACTTCCTTCAGAGATGC
TTTGACCTCAGACCTGCCAAATGGCTGCATGGCGGTGGGATCCCAGCATCCGGAGGCTTTTGGA
GGCCAGGGGTATGCATAACCGCACACCAGCCTGAGCCTCGGGGCCCTCCTCTAAGGAGCTTCCT
CCTGAGGAGAGTGGGAACTGGCAGCATTTCTCTCCCTTCCTTTCTGCCCTTCCCAGTGCCGGGT
GCACACGTCTGCCTGTGGGGCTGGCAGGCAGGCCAAGCTCTTGGTTACCTTGTGCCATGTCACG
GCCAAAGTGAAGGAACCACATTCCAGGTGGGAGCTGGCGGTTCTGAAGGTCAGGATAGTGAAAG
AAAACAATAGCAATAATCATTTCATACTCATGGAACTGAAGGGACCTTAGCATTCATCATCTCA
TCATTCCCTGTCTGACAAAGGAGGAAACTGAGGCCCAGAGAAGCAGAAAGGACTTCTCTGAACC
TCACTGTAAATTAGCATTAAATGCAGCCTTCCTACTACTGGCATTTTACCTACAAAAATTTTGC
TAGGGATGGATTGGCTTGACTTTGTAAAAATTAAGTCAGCAGTGCCCACATCTGGTGAGCTCTG
GAATGACCTCTGGGTGTGTGTCTGCTATTTTCCCTCATGGACTCCAAAGGTGGGGGCTGAAGAC
ATAGGCAGAGGCCACATAGGGCAGATGGCAGAAATCAAAATTACACTTGGAAAACCTTTGAAGA
CATCTGGAATGTTCATCCTGAACCTGACTCCACTCCAGGACAAGGAGTAGGTGGGCTGGCTGGA
AGGAGAGGCTATGCACTTAGGACAGTAGCTCTTTATCCCAAGAAGAGAGGACGAATGGGAGCCA
CCAAGAGAGGGGGACACGGATGAGGCCAAGCAGATACAGTCACATCTGGGAGAAGAGGAGGCAC
CCCGGGACAAGGAAGTTCTTCCTAGTCTCAGACAGGAAATGGATTGGCCACCCTCCAGCTCAGC
AAGCAGAGCTGATGCCCTCATTGGGTGGACAGGAATATCCTACTGTATAAATTGGATCACTGGT
AATATTTCAGACTTGAATTATCTTCATTTTGAATTCATTTTAAACTTGGACATCACCTTCCTAT
TTCCCAAGTTCCCCTAAAGGAAAACAAAGGAAACCCTTGAGCTGGAATGACCTCAGAAATAGTC
TGACTGTCCCCAGGTCAGAGTTCTTCAGCATCTGTGGCAGAAAGCCAGAAGTTTAGGCTCCTCC
TTCCTGGTCTGCCAGGAACTTCAGGACCAAGAAAACTCAGCTGTTCTGGGGTGCTGACAAGGTT
TCATTTTAAAACAAAGTTTTCCAGTGTTAATCTGATTTTTATAACACCTCTCCCTGTCCTCTGT
GGTCTTGTAGGTTGATGGAGGTTGCTAGAGATCTTGTCTAACATGTAAAAAGAATGCCAAACTG
ATAATGGTGGTGATAACTGTAGGGTACCTTTGTCGGGTGCTTCAGAGGTTTCAAAGCACTTACG
ACCTTTCATAAGCTGACCCCGAGAGCAAGCGACAGGTCAGTTATGCCACCCACTTGATAAATGA
GGCAATAGAGTCTAAGGAGAAATGAAATGGCCCAAAGCAAGCTAGATGCCGGAGTCCTGGCAGG
CTTCCTAGACTCTCCAAGCTCCAGGTGACCTGGTAGCGGAGAAGAAAGTAGACCCAGGAATGGC
CTTTTAGTGTTTGTTTTTTCCATACCAGTAAATAAAAGCTGTTTGCGCCCTCACTATTCATGTA
GGTTAGCCCTGAGAGACAAGGCATGGTGCCTGCTATTTAATTCATAGAGAATCCAAGGCTCAGA
AAAGTACAGGGACTTTCTGGTAAGGAATCCCCTGCTGGCTCTCTTGTCTCCAAGCCTGATCCAA
ACATAGGCTCATGTTCTGAAGCATCTATTCTCTACCCCACCTTAGACCTAGCCTGTGATTCAAG
ATCAGAAAAGCCCCAAGGTGAAAACCAGGTATTGACAAGAACCAGACCCACTAACTCTGTTTTA
GTAAGAGCACAAGAGCCCCTGTTCAGCTGGCCTCACCCTGTTGTTTGACAGAGACCCATGAGTT
TGGCCAAGCTTGGGGAGTCATGGCAAAGGTACTGAGCCCTAGTGCACAGGGCGGTGTGTGCCTC
GGATTAGGTGAACACAGCTTCTGGCAAGGTGACAGGTAGCTGGCAGGAATACTGTAGGTTATCA
TCTAAACATTCTGAATGGCTCAGTGGTCAAGACAGATGAGACCAGAGCTGGAAGGGATGACCAT
GGGATGAGGGGTGTGCACATGACACTGCGAGCTGCCACACTGGCATCACCATACACAGACACCT
TGTCCACCCCCTTGTCCCCAGTGTAGAGCTAAGGGAGGGGTGCCTCTGTTCACCAGCCTCCCTT
ATCACCATTTGATCATCTTCATCCACCCTGGGCCAGGAAGTCTGGAAACTGAGTGAAAGCCTGA
GAGTCTCTTGTCATGCTTAAAACAAAACAAAACAAACAAAAACCCTATTTTTCTTCCTATAAAA
CACCTCTTCCTTCTTGTTATCCCAGCAATGCCCTGAGATACATACCCTCTTCCCTGAATATTCA
TCAGGGACAAACACACCTATCTGTCCAGACCTCTTTTTTGTATGTAAAGTACTTTGACTTTGAT
TGCCAAAACCTCTACTTTAAAGATGGAGGCAGGGTACGC

hide sequence

RefSeq Acc Id:

XM_006229773 ⟹ XP_006229835

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	164,469,524 - 164,615,542 (+)	NCBI
mRatBN7.2	1	155,057,438 - 155,203,439 (+)	NCBI
Rnor_6.0	1	165,723,278 - 165,880,612 (+)	NCBI
Rnor_5.0	1	171,925,433 - 172,078,008 (+)	NCBI

Sequence:

show sequence

TTTTAAAAAAATGGTGTGTGCTCCTTAAACAATTCAGGCAATATAAAGATAAGGGAAACTTGAA
ACCTAACTATCCTCTCTCAAAGATAGTCGCTGGTTACATTTTGGAGAATCTCTTTCCTGAAATC
CTTATGCTTTTATATTCTCGAACTTCAAATAAATTGAAGCTGTCTAATCATGCTGTTTTTGCAA
TCAGTTTGCCCCTCTGACAAGATGACAAGAAATTGTGAAAAACCTTTCATGTCTAAAGATATTT
ACCATCATTTTAAATGGCTGCTTAGCATTACGTTGAATGTATGCATCACTATTTATTAAATCAG
CCCCCTATCGATGAATGTCTACATTCTCCTCAACTCATATTCAACAACCTCCTATAATAACCGT
GGGCATTGTTTTCTAAAAATTTCGATCATCTTTGCAAATTAAATACTTATTAAGTAATGTAAAT
GTAAACAAATGTCCTTTTTACAGGAAGATTCAATTTGGAGAATCGTCCTCTGATTTTCAGGGAT
GCCAGTGAAGCAGCTGCTGCATTAGTTCTAGCGAGACAGTGACAAACGGAGATCGCGAGAAGAG
TACAGAATTACAGGTGAGGTAGCCAATCTAGGCCCAAGCTCAGTGGGTTGGAATAGTCCTTCCC
CCTTTTCTCCCTTTCACTTCTTTTTTCTTAACATGGAGGAAGGACTGAGAACTGCATGTCCCAG
CATTTCGCAAGGATCACACTCCTGGGAACTGTAGTACCGTGTCTGAGAGGGGTCCGGAAGGAGG
GAATGGGAAGCTGTGTGCGGCATGCTGGGAGGTGTAGTCCCTCGGGCGGAAGGGGTTGCAAGTG
TAGGTTGGAGACGTAGAGAGTTTTACTTCATGGAGATGAGGCTGCAGAAATATCCGACTTCTCT
CTTAAGAGGTCTTTGAGTTTACAAAATCCCGTGGGAGTCGGCTTCATTCCCTTGTCTGTGACCC
AAGAGGGTGCGGTCCAGGACCGGCGCAGGGTTGGGAGATCCAGGCCGCGCAGGGCCGCAGCAGA
GCACACCGGGAGTTGTAGTCCAAGAGCTCTGAGGCTGTGGGACGTGTCGGGACAGCGCGCCGAC
TCCTCCTCCCCCGCCCTTCTCAGCGGTCCCCCGCCCCCTCCCTCCGCCTCCTCCTCTCTTGCCT
GCAACCGAGCGTCCCCTTCCCCCACTGTCGGGTTTCTCCGCGGCTACTGCAGAGGATTCAGATC
CGAGTAGCTGAAGAGAAGGAGGAGGAGGCTCCGGTCCCTGCGCGCCATCCACCACCCTACTGGA
CACGGACGAGGGAACGAGAGCGTCGCCGCTGTAGCCTTCAGAGAAGACAAGGGCATCGCCGCTT
CTGCTGCCGCCGCCGCGGTTTTCGTCTGCAGCAGCTCGCCGGATCCTCAGTCTTCCACAATGAA
CCCCGTTTACAGCCCCGTGCAACCTGGGGCTCCTTACGGCAACCCCAAGAACATGGCCTACACT
GGTTACCCCACAGCCTACCCGGCAGCTGCTCCTGCCTACAATCCCAGCCTGTACCCGACCAGCA
GCCCCAGTTATGCTCCAGCCACTCTGCTGATGAAACAAGCCTGGCCACAGAACTCCTCTTCCTG
TGGCACTGAAGGCACCTTCCACCTCCCAGTGGACACCGGGACGGAGAACCGAACTTACCAAGCA
TCCTCTGCGGCTTTCAGATATACTGCAGGGACACCATACAAGGTCCCACCGACCCAGAGTAATA
CTGCTCCACCCCCCTACTCCCCATCACCCAACCCCTATCAGACGGCCATGTATCCAATCAGAAG
TGCCTATCCCCAGCAGAATCTGTATGCCCAGGGAGCCTACTACACACAGCCTGTGTATGCTGCC
CAGCCTCATGTCATCCACCACACCACGGTTGTCCAGCCCAACAGCATTCCCTCTGCCATCTACC
CAGCTCCTGTTGCTGCCCCCAGGACCAATGGTGTGGCCATGGGCATGGTGGCAGGCACCACCAT
GGCAATGTCAGCAGGTACCCTGCTGACCACACCCCAGCACACTGCAATTGGGGCGCACCCTGTC
TCCATGCCCACTTACAGGGCCCAAGGAACCCCTGCGTATAGCTACGTGCCCCCGCACTGGTAAA
GCCTGCAGCCCATCCACATCTGGAGTCACATTGTATGCAACTACTCGAGTCTTACCTACCGGTG
CTGAGCGGTCCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCA
CTTTATGCATCTTTAATGGTTTTGATTTTTATTTTTGGTTTTTGTAAAAGCTGCTTTTTCTAAT
CTCCTAGGAGCCTCCCCTTGTGCCTCCCTCTTAGCCACTGCCCTCCTGGCTCTAGCCCTTCTTC
CTACCTAACCAGGCCCAGTCCTCTCTGCACTTCTTCCCTTCCCTAAGCATCCTGTCCCTGGGAT
CCCAGTCTAGTAGCTAGCAGAGAGTGTGGTTTGTTGTGATGGCTCATCAGAGGCTAGATTCCTG
GGAGAGCAGAACAGAGAGGCCCTCCATGTGGAGTAGGAACTTGGAGCTGTTGAGAAGGCCTCAT
CTCTGTCAGACTGTCATTTTCTGAAGCAAGATTAGTTCAGATACAAAGAAATACTTCTAAGAAC
CATCACAACAGACCAAGAACAAACCCACCTGGTTATGTAGGAGTGTTAGCAGCTTCATGTCCCC
AGGCTCAGACCCTGGGAAGACAGAGTTCGGGGAAGGGTGGAGGGAGGGAAGACACTGGGGAAGT
AGTGTGAAGAAGGGCAGGAGGGTGCTCACTCTGGTTTGAAAGGTCTTTGGCTACACCGCTGGGC
CTGGACCTTCTGATTTGCACAGTGATGTTAACTGACCTGGCACTTCCTTCAGAGATGCTTTGAC
CTCAGACCTGCCAAATGGCTGCATGGCGGTGGGATCCCAGCATCCGGAGGCTTTTGGAGGCCAG
GGGTATGCATAACCGCACACCAGCCTGAGCCTCGGGGCCCTCCTCTAAGGAGCTTCCTCCTGAG
GAGAGTGGGAACTGGCAGCATTTCTCTCCCTTCCTTTCTGCCCTTCCCAGTGCCGGGTGCACAC
GTCTGCCTGTGGGGCTGGCAGGCAGGCCAAGCTCTTGGTTACCTTGTGCCATGTCACGGCCAAA
GTGAAGGAACCACATTCCAGGTGGGAGCTGGCGGTTCTGAAGGTCAGGATAGTGAAAGAAAACA
ATAGCAATAATCATTTCATACTCATGGAACTGAAGGGACCTTAGCATTCATCATCTCATCATTC
CCTGTCTGACAAAGGAGGAAACTGAGGCCCAGAGAAGCAGAAAGGACTTCTCTGAACCTCACTG
TAAATTAGCATTAAATGCAGCCTTCCTACTACTGGCATTTTACCTACAAAAATTTTGCTAGGGA
TGGATTGGCTTGACTTTGTAAAAATTAAGTCAGCAGTGCCCACATCTGGTGAGCTCTGGAATGA
CCTCTGGGTGTGTGTCTGCTATTTTCCCTCATGGACTCCAAAGGTGGGGGCTGAAGACATAGGC
AGAGGCCACATAGGGCAGATGGCAGAAATCAAAATTACACTTGGAAAACCTTTGAAGACATCTG
GAATGTTCATCCTGAACCTGACTCCACTCCAGGACAAGGAGTAGGTGGGCTGGCTGGAAGGAGA
GGCTATGCACTTAGGACAGTAGCTCTTTATCCCAAGAAGAGAGGACGAATGGGAGCCACCAAGA
GAGGGGGACACGGATGAGGCCAAGCAGATACAGTCACATCTGGGAGAAGAGGAGGCACCCCGGG
ACAAGGAAGTTCTTCCTAGTCTCAGACAGGAAATGGATTGGCCACCCTCCAGCTCAGCAAGCAG
AGCTGATGCCCTCATTGGGTGGACAGGAATATCCTACTGTATAAATTGGATCACTGGTAATATT
TCAGACTTGAATTATCTTCATTTTGAATTCATTTTAAACTTGGACATCACCTTCCTATTTCCCA
AGTTCCCCTAAAGGAAAACAAAGGAAACCCTTGAGCTGGAATGACCTCAGAAATAGTCTGACTG
TCCCCAGGTCAGAGTTCTTCAGCATCTGTGGCAGAAAGCCAGAAGTTTAGGCTCCTCCTTCCTG
GTCTGCCAGGAACTTCAGGACCAAGAAAACTCAGCTGTTCTGGGGTGCTGACAAGGTTTCATTT
TAAAACAAAGTTTTCCAGTGTTAATCTGATTTTTATAACACCTCTCCCTGTCCTCTGTGGTCTT
GTAGGTTGATGGAGGTTGCTAGAGATCTTGTCTAACATGTAAAAAGAATGCCAAACTGATAATG
GTGGTGATAACTGTAGGGTACCTTTGTCGGGTGCTTCAGAGGTTTCAAAGCACTTACGACCTTT
CATAAGCTGACCCCGAGAGCAAGCGACAGGTCAGTTATGCCACCCACTTGATAAATGAGGCAAT
AGAGTCTAAGGAGAAATGAAATGGCCCAAAGCAAGCTAGATGCCGGAGTCCTGGCAGGCTTCCT
AGACTCTCCAAGCTCCAGGTGACCTGGTAGCGGAGAAGAAAGTAGACCCAGGAATGGCCTTTTA
GTGTTTGTTTTTTCCATACCAGTAAATAAAAGCTGTTTGCGCCCTCACTATTCATGTAGGTTAG
CCCTGAGAGACAAGGCATGGTGCCTGCTATTTAATTCATAGAGAATCCAAGGCTCAGAAAAGTA
CAGGGACTTTCTGGTAAGGAATCCCCTGCTGGCTCTCTTGTCTCCAAGCCTGATCCAAACATAG
GCTCATGTTCTGAAGCATCTATTCTCTACCCCACCTTAGACCTAGCCTGTGATTCAAGATCAGA
AAAGCCCCAAGGTGAAAACCAGGTATTGACAAGAACCAGACCCACTAACTCTGTTTTAGTAAGA
GCACAAGAGCCCCTGTTCAGCTGGCCTCACCCTGTTGTTTGACAGAGACCCATGAGTTTGGCCA
AGCTTGGGGAGTCATGGCAAAGGTACTGAGCCCTAGTGCACAGGGCGGTGTGTGCCTCGGATTA
GGTGAACACAGCTTCTGGCAAGGTGACAGGTAGCTGGCAGGAATACTGTAGGTTATCATCTAAA
CATTCTGAATGGCTCAGTGGTCAAGACAGATGAGACCAGAGCTGGAAGGGATGACCATGGGATG
AGGGGTGTGCACATGACACTGCGAGCTGCCACACTGGCATCACCATACACAGACACCTTGTCCA
CCCCCTTGTCCCCAGTGTAGAGCTAAGGGAGGGGTGCCTCTGTTCACCAGCCTCCCTTATCACC
ATTTGATCATCTTCATCCACCCTGGGCCAGGAAGTCTGGAAACTGAGTGAAAGCCTGAGAGTCT
CTTGTCATGCTTAAAACAAAACAAAACAAACAAAAACCCTATTTTTCTTCCTATAAAACACCTC
TTCCTTCTTGTTATCCCAGCAATGCCCTGAGATACATACCCTCTTCCCTGAATATTCATCAGGG
ACAAACACACCTATCTGTCCAGACCTCTTTTTTGTATGTAAAGTACTTTGACTTTGATTGCCAA
AACCTCTACTTTAAAGATGGAGGCAGGGTACGCATCATGATGCTATGAAGGGGTCATAGATTTG
CCAAAGGACACACAGCTCATGAGTGAAAGAGCCAAGATTTGAACTCTTCTGATCCTCTGCTCTT
GTTGCTGCCTCCTACTGGATCTCTTGTAAGCTTGTTTGAAGAAGGAAGGGGTTACTTGCTACCC
CACACAGAAACATTTATGGAGACTTGGGGAGCTCTGGTCTATCAGCTGAGCAGATTTTTAAGGA
TTTTTGCTTTGGGCCGAGACCTAAATGGGCCCCAGAGACGCAGAGGTAGATCCAGGTGGTAGCA
CAAATAGAAATTTGCCACAAAAGACCGAACTCAGAACACTGAAGGTGACAGCTGCCCAGTACTG
AAGATAATTGAGGACAGTATCGTCTGTCTTTCAACAAAGAGTCCTGGTTCTGGGAAGCCTGCAC
ACTCTGGCCATCTGACCCCTGTCCAGATCCAACGAGGTACTTTAATGGGACACAGAATAAGCCT
GAACTACTGAAAGCAGGTCTGGACTGGAGTACCAGGCTTACTTGAGAACCAGAGACTAACTTGT
GTTCGTGTATCCCAGTGCTTTCTGGCCATCTAGATGGTTCTAAGTTTGAGACCTAGTGATGTTT
CTTTGGAAGGCTCGATGCTCTGTTCTAAATAGCCTTCAGAAATGAGTCATGGGGAGCACACAAG
TAGCACAAGTCCTTTGGTCACCAAGTTCTGGCATCCTTATTGTGTAGACATGACACATCAAATA
AGGCATTGGCTGAAGCAGCTTAGTTCCCTACATATCAGATATCTTGCCCCTGCTATGGGCTCTG
GCCTTCAGAGCATTCTGGCTGAATCAGTCATCATCCCATGTGTGACTCATGTTCAGCAAGCTCC
ACCTTTCCATCTTGTGTTAACTATATCACTGCTGAGTGTGTGGCACCAAGAATCTTGTCAAGCT
TGGGAGACTAGAGAAGGCCACGCCTGGGTTGGAGTGGACAAGGGGAGCAAATCAATGGAAGAAA
CCTAGCTAGGTTCACTGGTCAGACAACACCTGAGCCTCTAGACAGAGTTCTGTGGTTATGCCAG
GCGGGCAGCAAGGTTTGTCCTTTTCCTACCCCTGTTCGCTCCTAGAAAAAACATTTGTGAGATT
TGGCATTATGTGGTTCCAGGACTCAGCTTTCAAAATTCCCAGTAGGCCAGCTCCAACATTCCAT
GGCCAAACTTGCTTGACCTAGACTTGGGTCCCACTCCCTCAGTTTCTCCTGTGGGGATTTCCTA
ATTTATCTATTAATGCCAGCCAGAAAGCCATCTAAGAACATAGGAGTTGAAACTGGTTGCCACA
GAGCCACAGAGGGCATAGAAGACAGAGAAGCACTTGCTTGCTGTGGCTGCTACTTTGAGTAGTC
CTTAGGTAGCCCTGCTGTGGCAGTGTGTCCTTTACCATTCCAGCCTGAGGAATCTCTTCCCCAA
GAGAACAGATTTAAAACGGCTTTACAGATAGCAGCAGCCCACAGGAATCTGCTTTGGGCTTGAC
CCTAGCTAGTAGCATCCTCTGTCCTTGACCCCACCTCAGCCATCCTCCTCATGCATGAAAGTCA
GACTAAATGAAGAATAGGACTGGCCCAGAGACCTCAGGTCAGCCAGATCGACTGGATCTGTCTT
GTGAACCAAGCTCCTCACAAGGTGAAGCTAGGCTAGGCCTCTTGCACCTTGGAGTTGTCTTTTA
TCTTTGAAGGCCCAGGGCCTGTCCCCTTCCTGTCTTCAAGGCATCTACACCCCTTTCATATCAC
ATGACAGAGAAGCTTGTTCTCATGGCATGTACCATCCCTGTGAAGAGAGCGTTGTGTATGATTT
TGTATTTTTTAATTCATTTTAACCTACAGGTTGGAATCTAATTTTTAAATTTTATTGGAACTCA
CATTTTAAAACAAATAAAAACATTTAAAAATAATAATAATTATAATAATAAACCTTTGACCAGT
GTCTTCCAA

hide sequence

RefSeq Acc Id:

XM_017589376 ⟹ XP_017444865

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	164,498,161 - 164,615,542 (+)	NCBI
mRatBN7.2	1	155,086,068 - 155,203,439 (+)	NCBI
Rnor_6.0	1	165,761,926 - 165,880,612 (+)	NCBI

Sequence:

show sequence

GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAGGGGCAGGCATGCCATGTTATGCCTT
GGAGGGCAGAGGACAATTTTACAGAGTCAGTTCTTTATTCTCATCTTTACCTGGGTTCTGAAGG
CTCTCACTCAGTTCACCAGGCTTGTTCAGTAAGCACTTTTACCCCCTGAGCCATCTTACTAGCC
CCCTTTGCAGGTGTTTTAAGCATTGATGATATGTAGTTAAGAGTTCAGATTAACTGCTGAAACA
GAGACCCAGACAATTAGTGGCTAAGAAAGTGTAGAACGTCATCTTTTATGTAACACTCAGAAGT
AAGGTGGTTATTGCCAAGTAGTCAGAGGTTCTGCTCCTTGAAGTCATCCAGGGAACCTCCATCT
TTCTTTCCCATTACTTTTCTTTGCATTGTCACAGGCAGCTTATGAACACATTCACCTTCTAGTT
TCCGGGAAGGGAAAAGAAAGAGAAGGGTGTATATAGTTCTCTAAGGAAGGAGTGGAGAACTGAT
AGTGTAGCTCATTGGTAGAATATGTGGTTAACATCCATTAGGATCTGGGTCAATTTCTACAACC
TCTTACTTCTAATGAGCCAGAGGGTGTATTCAGTTTTTCTGGCATTCCATTCATTATATTTAGA
ACTGTGACTTACCTAGTTGTAAATACTACTGGGGAAAGTAGTTTCTGGCAAAGTTGCTTGTGCC
CAGTTAAATCTTGGCAGAGAATGAGGATGGGGGAGGAAAAATGGATACTATTAGCAGTCTTCCT
GAGTCATTGCTAGCAGACAATGATTTTTATAACCCTCTTCCTTCCATTATTTTATTTAATTTTC
ACCAGGACCCTTGACGTAGATGTAAATGCCATTTTGTCAACTGAGAAACTGGATTTGAAGTATG
AAATGACTGGTTTAAAATCACAAGGATATCTTTAAACTAAACTAAACTACCAAGTTTATCTTTC
TAAAGGTTATAATCTAAACCTTCTCTTCCTGTTTCTTACCTCAGTGAGACACGGCTTTCTCACC
CAGGCCAAGAGTTTTGTTGTCTTCCTGTCCTCCATAACTAAGCTGGGCAGGTATCATCACCTCA
GCATGTTTCAGATCTGTTCCCTTCTCCATCCCCACAGCGGCTGCTTTAGCTCAGTCTTTAGCAT
CTCTGTCTGGACAGCAGCTTTCATTTCCCCCAGTGCTGCCAAGATCACGCCTCAGCCAAGCCTG
CCAAGTCATTTGTAGTCCCTGCTACTCAGTGTTTACTTTTCTATTGCTACATCTTTACTCGAGT
CTTTGTTTCTGTTCAAATGGCTCCTGTTCCTCTCTCCACTTGGCCTTACTTCCTCAGTAAAGCT
GTTGCTCTCTTTTCCAGGTAAGGTTTACTGTTTCTCTTCATGCTTCTGTGTCGCTGCTTGCCAT
TGGTAATGCTTGAGGCACTGTGTTGTTAATATGTCTCCCTTTAATCATCATCTCCCAGTCCTCT
GATAGAGTGGCTACTCAATAACCGCTTGACTGGAATGCCACGGACTGGTCCTTGAAGCCCAGTG
CTGGGTTTTTCTTATCATAATGACTCATTCTGTGTTAACTATGCATGCATTTCTCAAGAGTTTT
TCCAAAACCAAATTTGGGCGTCTGATCTTTCAGGAGCTCCTTTCCTTTGGCAGTCAAGGAGATG
CTTGAAGATGACTTTTGAACCAGATCCTCAGTCTTCCACAATGAACCCCGTTTACAGCCCCGTG
CAACCTGGGGCTCCTTACGGCAACCCCAAGAACATGGCCTACACTGGTTACCCCACAGCCTACC
CGGCAGCTGCTCCTGCCTACAATCCCAGCCTGTACCCGACCAGCAGCCCCAGTTATGCTCCAGA
ATTTCAGTTCCTGCATTCAGCTTATGCCACTCTGCTGATGAAACAAGCCTGGCCACAGAACTCC
TCTTCCTGTGGCACTGAAGGCACCTTCCACCTCCCAGTGGACACCGGGACGGAGAACCGAACTT
ACCAAGCATCCTCTGCGGCTTTCAGATATACTGCAGGGACACCATACAAGGTCCCACCGACCCA
GAGTAATACTGCTCCACCCCCCTACTCCCCATCACCCAACCCCTATCAGACGGCCATGTATCCA
ATCAGAAGTGCCTATCCCCAGCAGAATCTGTATGCCCAGGGAGCCTACTACACACAGCCTGTGT
ATGCTGCCCAGCCTCATGTCATCCACCACACCACGGTTGTCCAGCCCAACAGCATTCCCTCTGC
CATCTACCCAGCTCCTGTTGCTGCCCCCAGGACCAATGGTGTGGCCATGGGCATGGTGGCAGGC
ACCACCATGGCAATGTCAGCAGGTACCCTGCTGACCACACCCCAGCACACTGCAATTGGGGCGC
ACCCTGTCTCCATGCCCACTTACAGGGCCCAAGGAACCCCTGCGTATAGCTACGTGCCCCCGCA
CTGGTAAAGCCTGCAGCCCATCCACATCTGGAGTCACATTGTATGCAACTACTCGAGTCTTACC
TACCGGTGCTGAGCGGTCCCCTAGCAGCACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGC
AAGGGTCACTTTATGCATCTTTAATGGTTTTGATTTTTATTTTTGGTTTTTGTAAAAGCTGCTT
TTTCTAATCTCCTAGGAGCCTCCCCTTGTGCCTCCCTCTTAGCCACTGCCCTCCTGGCTCTAGC
CCTTCTTCCTACCTAACCAGGCCCAGTCCTCTCTGCACTTCTTCCCTTCCCTAAGCATCCTGTC
CCTGGGATCCCAGTCTAGTAGCTAGCAGAGAGTGTGGTTTGTTGTGATGGCTCATCAGAGGCTA
GATTCCTGGGAGAGCAGAACAGAGAGGCCCTCCATGTGGAGTAGGAACTTGGAGCTGTTGAGAA
GGCCTCATCTCTGTCAGACTGTCATTTTCTGAAGCAAGATTAGTTCAGATACAAAGAAATACTT
CTAAGAACCATCACAACAGACCAAGAACAAACCCACCTGGTTATGTAGGAGTGTTAGCAGCTTC
ATGTCCCCAGGCTCAGACCCTGGGAAGACAGAGTTCGGGGAAGGGTGGAGGGAGGGAAGACACT
GGGGAAGTAGTGTGAAGAAGGGCAGGAGGGTGCTCACTCTGGTTTGAAAGGTCTTTGGCTACAC
CGCTGGGCCTGGACCTTCTGATTTGCACAGTGATGTTAACTGACCTGGCACTTCCTTCAGAGAT
GCTTTGACCTCAGACCTGCCAAATGGCTGCATGGCGGTGGGATCCCAGCATCCGGAGGCTTTTG
GAGGCCAGGGGTATGCATAACCGCACACCAGCCTGAGCCTCGGGGCCCTCCTCTAAGGAGCTTC
CTCCTGAGGAGAGTGGGAACTGGCAGCATTTCTCTCCCTTCCTTTCTGCCCTTCCCAGTGCCGG
GTGCACACGTCTGCCTGTGGGGCTGGCAGGCAGGCCAAGCTCTTGGTTACCTTGTGCCATGTCA
CGGCCAAAGTGAAGGAACCACATTCCAGGTGGGAGCTGGCGGTTCTGAAGGTCAGGATAGTGAA
AGAAAACAATAGCAATAATCATTTCATACTCATGGAACTGAAGGGACCTTAGCATTCATCATCT
CATCATTCCCTGTCTGACAAAGGAGGAAACTGAGGCCCAGAGAAGCAGAAAGGACTTCTCTGAA
CCTCACTGTAAATTAGCATTAAATGCAGCCTTCCTACTACTGGCATTTTACCTACAAAAATTTT
GCTAGGGATGGATTGGCTTGACTTTGTAAAAATTAAGTCAGCAGTGCCCACATCTGGTGAGCTC
TGGAATGACCTCTGGGTGTGTGTCTGCTATTTTCCCTCATGGACTCCAAAGGTGGGGGCTGAAG
ACATAGGCAGAGGCCACATAGGGCAGATGGCAGAAATCAAAATTACACTTGGAAAACCTTTGAA
GACATCTGGAATGTTCATCCTGAACCTGACTCCACTCCAGGACAAGGAGTAGGTGGGCTGGCTG
GAAGGAGAGGCTATGCACTTAGGACAGTAGCTCTTTATCCCAAGAAGAGAGGACGAATGGGAGC
CACCAAGAGAGGGGGACACGGATGAGGCCAAGCAGATACAGTCACATCTGGGAGAAGAGGAGGC
ACCCCGGGACAAGGAAGTTCTTCCTAGTCTCAGACAGGAAATGGATTGGCCACCCTCCAGCTCA
GCAAGCAGAGCTGATGCCCTCATTGGGTGGACAGGAATATCCTACTGTATAAATTGGATCACTG
GTAATATTTCAGACTTGAATTATCTTCATTTTGAATTCATTTTAAACTTGGACATCACCTTCCT
ATTTCCCAAGTTCCCCTAAAGGAAAACAAAGGAAACCCTTGAGCTGGAATGACCTCAGAAATAG
TCTGACTGTCCCCAGGTCAGAGTTCTTCAGCATCTGTGGCAGAAAGCCAGAAGTTTAGGCTCCT
CCTTCCTGGTCTGCCAGGAACTTCAGGACCAAGAAAACTCAGCTGTTCTGGGGTGCTGACAAGG
TTTCATTTTAAAACAAAGTTTTCCAGTGTTAATCTGATTTTTATAACACCTCTCCCTGTCCTCT
GTGGTCTTGTAGGTTGATGGAGGTTGCTAGAGATCTTGTCTAACATGTAAAAAGAATGCCAAAC
TGATAATGGTGGTGATAACTGTAGGGTACCTTTGTCGGGTGCTTCAGAGGTTTCAAAGCACTTA
CGACCTTTCATAAGCTGACCCCGAGAGCAAGCGACAGGTCAGTTATGCCACCCACTTGATAAAT
GAGGCAATAGAGTCTAAGGAGAAATGAAATGGCCCAAAGCAAGCTAGATGCCGGAGTCCTGGCA
GGCTTCCTAGACTCTCCAAGCTCCAGGTGACCTGGTAGCGGAGAAGAAAGTAGACCCAGGAATG
GCCTTTTAGTGTTTGTTTTTTCCATACCAGTAAATAAAAGCTGTTTGCGCCCTCACTATTCATG
TAGGTTAGCCCTGAGAGACAAGGCATGGTGCCTGCTATTTAATTCATAGAGAATCCAAGGCTCA
GAAAAGTACAGGGACTTTCTGGTAAGGAATCCCCTGCTGGCTCTCTTGTCTCCAAGCCTGATCC
AAACATAGGCTCATGTTCTGAAGCATCTATTCTCTACCCCACCTTAGACCTAGCCTGTGATTCA
AGATCAGAAAAGCCCCAAGGTGAAAACCAGGTATTGACAAGAACCAGACCCACTAACTCTGTTT
TAGTAAGAGCACAAGAGCCCCTGTTCAGCTGGCCTCACCCTGTTGTTTGACAGAGACCCATGAG
TTTGGCCAAGCTTGGGGAGTCATGGCAAAGGTACTGAGCCCTAGTGCACAGGGCGGTGTGTGCC
TCGGATTAGGTGAACACAGCTTCTGGCAAGGTGACAGGTAGCTGGCAGGAATACTGTAGGTTAT
CATCTAAACATTCTGAATGGCTCAGTGGTCAAGACAGATGAGACCAGAGCTGGAAGGGATGACC
ATGGGATGAGGGGTGTGCACATGACACTGCGAGCTGCCACACTGGCATCACCATACACAGACAC
CTTGTCCACCCCCTTGTCCCCAGTGTAGAGCTAAGGGAGGGGTGCCTCTGTTCACCAGCCTCCC
TTATCACCATTTGATCATCTTCATCCACCCTGGGCCAGGAAGTCTGGAAACTGAGTGAAAGCCT
GAGAGTCTCTTGTCATGCTTAAAACAAAACAAAACAAACAAAAACCCTATTTTTCTTCCTATAA
AACACCTCTTCCTTCTTGTTATCCCAGCAATGCCCTGAGATACATACCCTCTTCCCTGAATATT
CATCAGGGACAAACACACCTATCTGTCCAGACCTCTTTTTTGTATGTAAAGTACTTTGACTTTG
ATTGCCAAAACCTCTACTTTAAAGATGGAGGCAGGGTACGCATCATGATGCTATGAAGGGGTCA
TAGATTTGCCAAAGGACACACAGCTCATGAGTGAAAGAGCCAAGATTTGAACTCTTCTGATCCT
CTGCTCTTGTTGCTGCCTCCTACTGGATCTCTTGTAAGCTTGTTTGAAGAAGGAAGGGGTTACT
TGCTACCCCACACAGAAACATTTATGGAGACTTGGGGAGCTCTGGTCTATCAGCTGAGCAGATT
TTTAAGGATTTTTGCTTTGGGCCGAGACCTAAATGGGCCCCAGAGACGCAGAGGTAGATCCAGG
TGGTAGCACAAATAGAAATTTGCCACAAAAGACCGAACTCAGAACACTGAAGGTGACAGCTGCC
CAGTACTGAAGATAATTGAGGACAGTATCGTCTGTCTTTCAACAAAGAGTCCTGGTTCTGGGAA
GCCTGCACACTCTGGCCATCTGACCCCTGTCCAGATCCAACGAGGTACTTTAATGGGACACAGA
ATAAGCCTGAACTACTGAAAGCAGGTCTGGACTGGAGTACCAGGCTTACTTGAGAACCAGAGAC
TAACTTGTGTTCGTGTATCCCAGTGCTTTCTGGCCATCTAGATGGTTCTAAGTTTGAGACCTAG
TGATGTTTCTTTGGAAGGCTCGATGCTCTGTTCTAAATAGCCTTCAGAAATGAGTCATGGGGAG
CACACAAGTAGCACAAGTCCTTTGGTCACCAAGTTCTGGCATCCTTATTGTGTAGACATGACAC
ATCAAATAAGGCATTGGCTGAAGCAGCTTAGTTCCCTACATATCAGATATCTTGCCCCTGCTAT
GGGCTCTGGCCTTCAGAGCATTCTGGCTGAATCAGTCATCATCCCATGTGTGACTCATGTTCAG
CAAGCTCCACCTTTCCATCTTGTGTTAACTATATCACTGCTGAGTGTGTGGCACCAAGAATCTT
GTCAAGCTTGGGAGACTAGAGAAGGCCACGCCTGGGTTGGAGTGGACAAGGGGAGCAAATCAAT
GGAAGAAACCTAGCTAGGTTCACTGGTCAGACAACACCTGAGCCTCTAGACAGAGTTCTGTGGT
TATGCCAGGCGGGCAGCAAGGTTTGTCCTTTTCCTACCCCTGTTCGCTCCTAGAAAAAACATTT
GTGAGATTTGGCATTATGTGGTTCCAGGACTCAGCTTTCAAAATTCCCAGTAGGCCAGCTCCAA
CATTCCATGGCCAAACTTGCTTGACCTAGACTTGGGTCCCACTCCCTCAGTTTCTCCTGTGGGG
ATTTCCTAATTTATCTATTAATGCCAGCCAGAAAGCCATCTAAGAACATAGGAGTTGAAACTGG
TTGCCACAGAGCCACAGAGGGCATAGAAGACAGAGAAGCACTTGCTTGCTGTGGCTGCTACTTT
GAGTAGTCCTTAGGTAGCCCTGCTGTGGCAGTGTGTCCTTTACCATTCCAGCCTGAGGAATCTC
TTCCCCAAGAGAACAGATTTAAAACGGCTTTACAGATAGCAGCAGCCCACAGGAATCTGCTTTG
GGCTTGACCCTAGCTAGTAGCATCCTCTGTCCTTGACCCCACCTCAGCCATCCTCCTCATGCAT
GAAAGTCAGACTAAATGAAGAATAGGACTGGCCCAGAGACCTCAGGTCAGCCAGATCGACTGGA
TCTGTCTTGTGAACCAAGCTCCTCACAAGGTGAAGCTAGGCTAGGCCTCTTGCACCTTGGAGTT
GTCTTTTATCTTTGAAGGCCCAGGGCCTGTCCCCTTCCTGTCTTCAAGGCATCTACACCCCTTT
CATATCACATGACAGAGAAGCTTGTTCTCATGGCATGTACCATCCCTGTGAAGAGAGCGTTGTG
TATGATTTTGTATTTTTTAATTCATTTTAACCTACAGGTTGGAATCTAATTTTTAAATTTTATT
GGAACTCACATTTTAAAACAAATAAAAACATTTAAAAATAATAATAATTATAATAATAAACCTT
TGACCAGTGTCTTCCAA

hide sequence

RefSeq Acc Id:

XM_017589377 ⟹ XP_017444866

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	164,498,162 - 164,615,542 (+)	NCBI
mRatBN7.2	1	155,086,068 - 155,203,439 (+)	NCBI
Rnor_6.0	1	165,761,926 - 165,880,612 (+)	NCBI

Sequence:

show sequence

GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAGGGGCAGGCATGCCATGTTATGCCTT
GGAGGGCAGAGGACAATTTTACAGAGTCAGTTCTTTATTCTCATCTTTACCTGGGTTCTGAAGG
CTCTCACTCAGTTCACCAGGCTTGTTCAGTAAGCACTTTTACCCCCTGAGCCATCTTACTAGCC
CCCTTTGCAGGTGTTTTAAGCATTGATGATATGTAGTTAAGAGTTCAGATTAACTGCTGAAACA
GAGACCCAGACAATTAGTGGCTAAGAAAGTGTAGAACGTCATCTTTTATGTAACACTCAGAAGT
AAGGTGGTTATTGCCAAGTAGTCAGAGGTTCTGCTCCTTGAAGTCATCCAGGGAACCTCCATCT
TTCTTTCCCATTACTTTTCTTTGCATTGTCACAGGCAGCTTATGAACACATTCACCTTCTAGTT
TCCGGGAAGGGAAAAGAAAGAGAAGGGTGTATATAGTTCTCTAAGGAAGGAGTGGAGAACTGAT
AGTGTAGCTCATTGGTAGAATATGTGGTTAACATCCATTAGGATCTGGGTCAATTTCTACAACC
TCTTACTTCTAATGAGCCAGAGGGTGTATTCAGTTTTTCTGGCATTCCATTCATTATATTTAGA
ACTGTGACTTACCTAGTTGTAAATACTACTGGGGAAAGTAGTTTCTGGCAAAGTTGCTTGTGCC
CAGTTAAATCTTGGCAGAGAATGAGGATGGGGGAGGAAAAATGGATACTATTAGCAGTCTTCCT
GAGTCATTGCTAGCAGACAATGATTTTTATAACCCTCTTCCTTCCATTATTTTATTTAATTTTC
ACCAGGACCCTTGACGTAGATGTAAATGCCATTTTGTCAACTGAGAAACTGGATTTGAAGTATG
AAATGACTGGTTTAAAATCACAAGGATATCTTTAAACTAAACTAAACTACCAAGTTTATCTTTC
TAAAGGTTATAATCTAAACCTTCTCTTCCTGTTTCTTACCTCAGTGAGACACGGCTTTCTCACC
CAGGCCAAGAGTTTTGTTGTCTTCCTGTCCTCCATAACTAAGCTGGGCAGGTATCATCACCTCA
GCATGTTTCAGATCTGTTCCCTTCTCCATCCCCACAGCGGCTGCTTTAGCTCAGTCTTTAGCAT
CTCTGTCTGGACAGCAGCTTTCATTTCCCCCAGTGCTGCCAAGATCACGCCTCAGCCAAGCCTG
CCAAGTCATTTGTAGTCCCTGCTACTCAGTGTTTACTTTTCTATTGCTACATCTTTACTCGAGT
CTTTGTTTCTGTTCAAATGGCTCCTGTTCCTCTCTCCACTTGGCCTTACTTCCTCAGTAAAGCT
GTTGCTCTCTTTTCCAGGTAAGGTTTACTGTTTCTCTTCATGCTTCTGTGTCGCTGCTTGCCAT
TGGTAATGCTTGAGGCACTGTGTTGTTAATATGTCTCCCTTTAATCATCATCTCCCAGTCCTCT
GATAGAGTGGCTACTCAATAACCGCTTGACTGGAATGCCACGGACTGGTCCTTGAAGCCCAGTG
CTGGGTTTTTCTTATCATAATGACTCATTCTGTGTTAACTATGCATGCATTTCTCAAGAGTTTT
TCCAAAACCAAATTTGGGCGTCTGATCTTTCAGGAGCTCCTTTCCTTTGGCAGTCAAGGAGATG
CTTGAAGATGACTTTTGAACCAGATCCTCAGTCTTCCACAATGAACCCCGTTTACAGCCCCGTG
CAACCTGGGGCTCCTTACGGCAACCCCAAGAACATGGCCTACACTGGTTACCCCACAGCCTACC
CGGCAGCTGCTCCTGCCTACAATCCCAGCCTGTACCCGACCAGCAGCCCCAGTTATGCTCCAGC
CACTCTGCTGATGAAACAAGCCTGGCCACAGAACTCCTCTTCCTGTGGCACTGAAGGCACCTTC
CACCTCCCAGTGGACACCGGGACGGAGAACCGAACTTACCAAGCATCCTCTGCGGCTTTCAGAT
ATACTGCAGGGACACCATACAAGGTCCCACCGACCCAGAGTAATACTGCTCCACCCCCCTACTC
CCCATCACCCAACCCCTATCAGACGGCCATGTATCCAATCAGAAGTGCCTATCCCCAGCAGAAT
CTGTATGCCCAGGGAGCCTACTACACACAGCCTGTGTATGCTGCCCAGCCTCATGTCATCCACC
ACACCACGGTTGTCCAGCCCAACAGCATTCCCTCTGCCATCTACCCAGCTCCTGTTGCTGCCCC
CAGGACCAATGGTGTGGCCATGGGCATGGTGGCAGGCACCACCATGGCAATGTCAGCAGGTACC
CTGCTGACCACACCCCAGCACACTGCAATTGGGGCGCACCCTGTCTCCATGCCCACTTACAGGG
CCCAAGGAACCCCTGCGTATAGCTACGTGCCCCCGCACTGGTAAAGCCTGCAGCCCATCCACAT
CTGGAGTCACATTGTATGCAACTACTCGAGTCTTACCTACCGGTGCTGAGCGGTCCCCTAGCAG
CACCACCTCTATTTGCAAGAAGAGACAACGGAAGTGCAAGGGTCACTTTATGCATCTTTAATGG
TTTTGATTTTTATTTTTGGTTTTTGTAAAAGCTGCTTTTTCTAATCTCCTAGGAGCCTCCCCTT
GTGCCTCCCTCTTAGCCACTGCCCTCCTGGCTCTAGCCCTTCTTCCTACCTAACCAGGCCCAGT
CCTCTCTGCACTTCTTCCCTTCCCTAAGCATCCTGTCCCTGGGATCCCAGTCTAGTAGCTAGCA
GAGAGTGTGGTTTGTTGTGATGGCTCATCAGAGGCTAGATTCCTGGGAGAGCAGAACAGAGAGG
CCCTCCATGTGGAGTAGGAACTTGGAGCTGTTGAGAAGGCCTCATCTCTGTCAGACTGTCATTT
TCTGAAGCAAGATTAGTTCAGATACAAAGAAATACTTCTAAGAACCATCACAACAGACCAAGAA
CAAACCCACCTGGTTATGTAGGAGTGTTAGCAGCTTCATGTCCCCAGGCTCAGACCCTGGGAAG
ACAGAGTTCGGGGAAGGGTGGAGGGAGGGAAGACACTGGGGAAGTAGTGTGAAGAAGGGCAGGA
GGGTGCTCACTCTGGTTTGAAAGGTCTTTGGCTACACCGCTGGGCCTGGACCTTCTGATTTGCA
CAGTGATGTTAACTGACCTGGCACTTCCTTCAGAGATGCTTTGACCTCAGACCTGCCAAATGGC
TGCATGGCGGTGGGATCCCAGCATCCGGAGGCTTTTGGAGGCCAGGGGTATGCATAACCGCACA
CCAGCCTGAGCCTCGGGGCCCTCCTCTAAGGAGCTTCCTCCTGAGGAGAGTGGGAACTGGCAGC
ATTTCTCTCCCTTCCTTTCTGCCCTTCCCAGTGCCGGGTGCACACGTCTGCCTGTGGGGCTGGC
AGGCAGGCCAAGCTCTTGGTTACCTTGTGCCATGTCACGGCCAAAGTGAAGGAACCACATTCCA
GGTGGGAGCTGGCGGTTCTGAAGGTCAGGATAGTGAAAGAAAACAATAGCAATAATCATTTCAT
ACTCATGGAACTGAAGGGACCTTAGCATTCATCATCTCATCATTCCCTGTCTGACAAAGGAGGA
AACTGAGGCCCAGAGAAGCAGAAAGGACTTCTCTGAACCTCACTGTAAATTAGCATTAAATGCA
GCCTTCCTACTACTGGCATTTTACCTACAAAAATTTTGCTAGGGATGGATTGGCTTGACTTTGT
AAAAATTAAGTCAGCAGTGCCCACATCTGGTGAGCTCTGGAATGACCTCTGGGTGTGTGTCTGC
TATTTTCCCTCATGGACTCCAAAGGTGGGGGCTGAAGACATAGGCAGAGGCCACATAGGGCAGA
TGGCAGAAATCAAAATTACACTTGGAAAACCTTTGAAGACATCTGGAATGTTCATCCTGAACCT
GACTCCACTCCAGGACAAGGAGTAGGTGGGCTGGCTGGAAGGAGAGGCTATGCACTTAGGACAG
TAGCTCTTTATCCCAAGAAGAGAGGACGAATGGGAGCCACCAAGAGAGGGGGACACGGATGAGG
CCAAGCAGATACAGTCACATCTGGGAGAAGAGGAGGCACCCCGGGACAAGGAAGTTCTTCCTAG
TCTCAGACAGGAAATGGATTGGCCACCCTCCAGCTCAGCAAGCAGAGCTGATGCCCTCATTGGG
TGGACAGGAATATCCTACTGTATAAATTGGATCACTGGTAATATTTCAGACTTGAATTATCTTC
ATTTTGAATTCATTTTAAACTTGGACATCACCTTCCTATTTCCCAAGTTCCCCTAAAGGAAAAC
AAAGGAAACCCTTGAGCTGGAATGACCTCAGAAATAGTCTGACTGTCCCCAGGTCAGAGTTCTT
CAGCATCTGTGGCAGAAAGCCAGAAGTTTAGGCTCCTCCTTCCTGGTCTGCCAGGAACTTCAGG
ACCAAGAAAACTCAGCTGTTCTGGGGTGCTGACAAGGTTTCATTTTAAAACAAAGTTTTCCAGT
GTTAATCTGATTTTTATAACACCTCTCCCTGTCCTCTGTGGTCTTGTAGGTTGATGGAGGTTGC
TAGAGATCTTGTCTAACATGTAAAAAGAATGCCAAACTGATAATGGTGGTGATAACTGTAGGGT
ACCTTTGTCGGGTGCTTCAGAGGTTTCAAAGCACTTACGACCTTTCATAAGCTGACCCCGAGAG
CAAGCGACAGGTCAGTTATGCCACCCACTTGATAAATGAGGCAATAGAGTCTAAGGAGAAATGA
AATGGCCCAAAGCAAGCTAGATGCCGGAGTCCTGGCAGGCTTCCTAGACTCTCCAAGCTCCAGG
TGACCTGGTAGCGGAGAAGAAAGTAGACCCAGGAATGGCCTTTTAGTGTTTGTTTTTTCCATAC
CAGTAAATAAAAGCTGTTTGCGCCCTCACTATTCATGTAGGTTAGCCCTGAGAGACAAGGCATG
GTGCCTGCTATTTAATTCATAGAGAATCCAAGGCTCAGAAAAGTACAGGGACTTTCTGGTAAGG
AATCCCCTGCTGGCTCTCTTGTCTCCAAGCCTGATCCAAACATAGGCTCATGTTCTGAAGCATC
TATTCTCTACCCCACCTTAGACCTAGCCTGTGATTCAAGATCAGAAAAGCCCCAAGGTGAAAAC
CAGGTATTGACAAGAACCAGACCCACTAACTCTGTTTTAGTAAGAGCACAAGAGCCCCTGTTCA
GCTGGCCTCACCCTGTTGTTTGACAGAGACCCATGAGTTTGGCCAAGCTTGGGGAGTCATGGCA
AAGGTACTGAGCCCTAGTGCACAGGGCGGTGTGTGCCTCGGATTAGGTGAACACAGCTTCTGGC
AAGGTGACAGGTAGCTGGCAGGAATACTGTAGGTTATCATCTAAACATTCTGAATGGCTCAGTG
GTCAAGACAGATGAGACCAGAGCTGGAAGGGATGACCATGGGATGAGGGGTGTGCACATGACAC
TGCGAGCTGCCACACTGGCATCACCATACACAGACACCTTGTCCACCCCCTTGTCCCCAGTGTA
GAGCTAAGGGAGGGGTGCCTCTGTTCACCAGCCTCCCTTATCACCATTTGATCATCTTCATCCA
CCCTGGGCCAGGAAGTCTGGAAACTGAGTGAAAGCCTGAGAGTCTCTTGTCATGCTTAAAACAA
AACAAAACAAACAAAAACCCTATTTTTCTTCCTATAAAACACCTCTTCCTTCTTGTTATCCCAG
CAATGCCCTGAGATACATACCCTCTTCCCTGAATATTCATCAGGGACAAACACACCTATCTGTC
CAGACCTCTTTTTTGTATGTAAAGTACTTTGACTTTGATTGCCAAAACCTCTACTTTAAAGATG
GAGGCAGGGTACGCATCATGATGCTATGAAGGGGTCATAGATTTGCCAAAGGACACACAGCTCA
TGAGTGAAAGAGCCAAGATTTGAACTCTTCTGATCCTCTGCTCTTGTTGCTGCCTCCTACTGGA
TCTCTTGTAAGCTTGTTTGAAGAAGGAAGGGGTTACTTGCTACCCCACACAGAAACATTTATGG
AGACTTGGGGAGCTCTGGTCTATCAGCTGAGCAGATTTTTAAGGATTTTTGCTTTGGGCCGAGA
CCTAAATGGGCCCCAGAGACGCAGAGGTAGATCCAGGTGGTAGCACAAATAGAAATTTGCCACA
AAAGACCGAACTCAGAACACTGAAGGTGACAGCTGCCCAGTACTGAAGATAATTGAGGACAGTA
TCGTCTGTCTTTCAACAAAGAGTCCTGGTTCTGGGAAGCCTGCACACTCTGGCCATCTGACCCC
TGTCCAGATCCAACGAGGTACTTTAATGGGACACAGAATAAGCCTGAACTACTGAAAGCAGGTC
TGGACTGGAGTACCAGGCTTACTTGAGAACCAGAGACTAACTTGTGTTCGTGTATCCCAGTGCT
TTCTGGCCATCTAGATGGTTCTAAGTTTGAGACCTAGTGATGTTTCTTTGGAAGGCTCGATGCT
CTGTTCTAAATAGCCTTCAGAAATGAGTCATGGGGAGCACACAAGTAGCACAAGTCCTTTGGTC
ACCAAGTTCTGGCATCCTTATTGTGTAGACATGACACATCAAATAAGGCATTGGCTGAAGCAGC
TTAGTTCCCTACATATCAGATATCTTGCCCCTGCTATGGGCTCTGGCCTTCAGAGCATTCTGGC
TGAATCAGTCATCATCCCATGTGTGACTCATGTTCAGCAAGCTCCACCTTTCCATCTTGTGTTA
ACTATATCACTGCTGAGTGTGTGGCACCAAGAATCTTGTCAAGCTTGGGAGACTAGAGAAGGCC
ACGCCTGGGTTGGAGTGGACAAGGGGAGCAAATCAATGGAAGAAACCTAGCTAGGTTCACTGGT
CAGACAACACCTGAGCCTCTAGACAGAGTTCTGTGGTTATGCCAGGCGGGCAGCAAGGTTTGTC
CTTTTCCTACCCCTGTTCGCTCCTAGAAAAAACATTTGTGAGATTTGGCATTATGTGGTTCCAG
GACTCAGCTTTCAAAATTCCCAGTAGGCCAGCTCCAACATTCCATGGCCAAACTTGCTTGACCT
AGACTTGGGTCCCACTCCCTCAGTTTCTCCTGTGGGGATTTCCTAATTTATCTATTAATGCCAG
CCAGAAAGCCATCTAAGAACATAGGAGTTGAAACTGGTTGCCACAGAGCCACAGAGGGCATAGA
AGACAGAGAAGCACTTGCTTGCTGTGGCTGCTACTTTGAGTAGTCCTTAGGTAGCCCTGCTGTG
GCAGTGTGTCCTTTACCATTCCAGCCTGAGGAATCTCTTCCCCAAGAGAACAGATTTAAAACGG
CTTTACAGATAGCAGCAGCCCACAGGAATCTGCTTTGGGCTTGACCCTAGCTAGTAGCATCCTC
TGTCCTTGACCCCACCTCAGCCATCCTCCTCATGCATGAAAGTCAGACTAAATGAAGAATAGGA
CTGGCCCAGAGACCTCAGGTCAGCCAGATCGACTGGATCTGTCTTGTGAACCAAGCTCCTCACA
AGGTGAAGCTAGGCTAGGCCTCTTGCACCTTGGAGTTGTCTTTTATCTTTGAAGGCCCAGGGCC
TGTCCCCTTCCTGTCTTCAAGGCATCTACACCCCTTTCATATCACATGACAGAGAAGCTTGTTC
TCATGGCATGTACCATCCCTGTGAAGAGAGCGTTGTGTATGATTTTGTATTTTTTAATTCATTT
TAACCTACAGGTTGGAATCTAATTTTTAAATTTTATTGGAACTCACATTTTAAAACAAATAAAA
ACATTTAAAAATAATAATAATTATAATAATAAACCTTTGACCAGTGTCTTCCAA

hide sequence

RefSeq Acc Id:

XM_039082504 ⟹ XP_038938432

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	164,469,526 - 164,615,542 (+)	NCBI
mRatBN7.2	1	155,057,436 - 155,203,439 (+)	NCBI

RefSeq Acc Id:

XM_039082510 ⟹ XP_038938438

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	164,469,526 - 164,615,542 (+)	NCBI
mRatBN7.2	1	155,057,436 - 155,203,439 (+)	NCBI

RefSeq Acc Id:

XM_039082512 ⟹ XP_038938440

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	164,498,161 - 164,615,542 (+)	NCBI
mRatBN7.2	1	155,086,067 - 155,203,439 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101964	(Get FASTA)	NCBI Sequence Viewer
	XP_006229835	(Get FASTA)	NCBI Sequence Viewer
	XP_017444865	(Get FASTA)	NCBI Sequence Viewer
	XP_017444866	(Get FASTA)	NCBI Sequence Viewer
	XP_038938432	(Get FASTA)	NCBI Sequence Viewer
	XP_038938438	(Get FASTA)	NCBI Sequence Viewer
	XP_038938440	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM18313	(Get FASTA)	NCBI Sequence Viewer
	EDM18314	(Get FASTA)	NCBI Sequence Viewer
	EDM18315	(Get FASTA)	NCBI Sequence Viewer
	EDM18316	(Get FASTA)	NCBI Sequence Viewer
	EDM18317	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000025827
	ENSRNOP00000025827.6
	ENSRNOP00000081214
	ENSRNOP00000081214.2
	ENSRNOP00000086917.1
	ENSRNOP00000087972
	ENSRNOP00000087972.1
	ENSRNOP00000109680
	ENSRNOP00000109680.1

RefSeq Acc Id:

NP_001101964 ⟸ NM_001108494

- UniProtKB:

D3ZHW1 (UniProtKB/TrEMBL), A6I6R4 (UniProtKB/TrEMBL), A0A8I5ZR57 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MNPVYSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTSSPSYAPEFQFLHSAYATLLM
KQAWPQNSSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPN
PYQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNSIPSAIYPAPVAAPRTNG
VAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMPTYRAQGTPAYSYVPPHW

hide sequence

RefSeq Acc Id:	XP_006229835 ⟸ XM_006229773
- Peptide Label:	isoform X4
- UniProtKB:	A6I6R5 (UniProtKB/TrEMBL), A0A8I5ZR57 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNPVYSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTSSPSYAPATLLMKQAWPQNSS SCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNPYQTAMYPI RSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNSIPSAIYPAPVAAPRTNGVAMGMVAGT TMAMSAGTLLTTPQHTAIGAHPVSMPTYRAQGTPAYSYVPPHW hide sequence

RefSeq Acc Id:	XP_017444865 ⟸ XM_017589376
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZR57 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTFEPDPQSSTMNPVYSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTSSPSYAPEFQ FLHSAYATLLMKQAWPQNSSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSN TAPPPYSPSPNPYQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNSIPSAIY PAPVAAPRTNGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMPTYRAQGTPAYSYVPPHW hide sequence

RefSeq Acc Id:	XP_017444866 ⟸ XM_017589377
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5ZR57 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTFEPDPQSSTMNPVYSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTSSPSYAPATL LMKQAWPQNSSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPPYSPS PNPYQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTTVVQPNSIPSAIYPAPVAAPRT NGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMPTYRAQGTPAYSYVPPHW hide sequence

Ensembl Acc Id:

ENSRNOP00000025827 ⟸ ENSRNOT00000025827

RefSeq Acc Id:	XP_038938432 ⟸ XM_039082504
- Peptide Label:	isoform X3
- UniProtKB:	D3ZHW1 (UniProtKB/TrEMBL), A6I6R4 (UniProtKB/TrEMBL), A0A8I5ZR57 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038938438 ⟸ XM_039082510
- Peptide Label:	isoform X4
- UniProtKB:	A6I6R5 (UniProtKB/TrEMBL), A0A8I5ZR57 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038938440 ⟸ XM_039082512
- Peptide Label:	isoform X5

Ensembl Acc Id:

ENSRNOP00000081214 ⟸ ENSRNOT00000097710

Ensembl Acc Id:

ENSRNOP00000087972 ⟸ ENSRNOT00000106607

Ensembl Acc Id:

ENSRNOP00000086917 ⟸ ENSRNOT00000095174

Ensembl Acc Id:

ENSRNOP00000109680 ⟸ ENSRNOT00000164813

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZHW1-F1-model_v2	AlphaFold	D3ZHW1	1-244	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13690250

Promoter ID:

EPDNEW_R774

Type:

initiation region

Name:

Fam168a_1

Description:

family with sequence similarity 168, member A

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	1	165,724,489 - 165,724,549	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308929	AgrOrtholog
BioCyc Gene	G2FUF-58315	BioCyc
Ensembl Genes	ENSRNOG00000018873	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000025827	ENTREZGENE
	ENSRNOT00000025827.7	UniProtKB/TrEMBL
	ENSRNOT00000095174.2	UniProtKB/TrEMBL
	ENSRNOT00000097710	ENTREZGENE
	ENSRNOT00000097710.2	UniProtKB/TrEMBL
	ENSRNOT00000106607	ENTREZGENE
	ENSRNOT00000106607.2	UniProtKB/TrEMBL
	ENSRNOT00000164813	ENTREZGENE
	ENSRNOT00000164813.1	UniProtKB/TrEMBL
InterPro	FAM168A/MANI	UniProtKB/TrEMBL
KEGG Report	rno:361614	UniProtKB/TrEMBL
NCBI Gene	361614	ENTREZGENE
PANTHER	PTHR31844	UniProtKB/TrEMBL
Pfam	TCRP1	UniProtKB/TrEMBL
PhenoGen	Fam168a	PhenoGen
RatGTEx	ENSRNOG00000018873	RatGTEx
UniProt	A0A8I5ZR57	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A572_RAT	UniProtKB/TrEMBL
	A0A8I6A7D9_RAT	UniProtKB/TrEMBL
	A0ABK0M3I0_RAT	UniProtKB/TrEMBL
	A6I6R4	ENTREZGENE, UniProtKB/TrEMBL
	A6I6R5	ENTREZGENE, UniProtKB/TrEMBL
	D3ZHW1	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-10-16	Fam168a	family with sequence similarity 168, member A	RGD1308929	LOC361614	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1308929	LOC361614	RGD1308929_predicted	LOC361614 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-20	RGD1308929_predicted	LOC361614 (predicted)	LOC361614_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC361614_predicted	LOC361614 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD