Naca (nascent polypeptide associated complex subunit alpha) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Naca (nascent polypeptide associated complex subunit alpha) Rattus norvegicus
Analyze
Symbol: Naca
Name: nascent polypeptide associated complex subunit alpha
RGD ID: 1308642
Description: Predicted to enable TBP-class protein binding activity; transcription coactivator activity; and unfolded protein binding activity. Predicted to be involved in negative regulation of protein localization to endoplasmic reticulum and protein targeting to membrane. Predicted to act upstream of or within myoblast migration. Predicted to be located in nucleus. Predicted to be part of nascent polypeptide-associated complex. Predicted to be active in cytoplasm. Orthologous to human NACA (nascent polypeptide associated complex subunit alpha); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC288770; nascent polypeptide-associated complex alpha subunit; nascent polypeptide-associated complex subunit alpha; nascent-polypeptide-associated complex alpha polypeptide
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr871,053,474 - 1,066,606 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl71,054,338 - 1,066,605 (+)EnsemblGRCr8
mRatBN7.27468,862 - 481,992 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7469,723 - 481,992 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx73,227,925 - 3,240,227 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.075,103,937 - 5,116,239 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.075,401,559 - 5,413,834 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.072,458,283 - 2,470,674 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl72,458,264 - 2,470,674 (+)Ensemblrn6Rnor6.0
Rnor_5.072,437,474 - 2,450,445 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.471,330,795 - 1,342,502 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera7349,093 - 361,347 (+)NCBICelera
RGSC_v3.171,330,206 - 1,342,498 (+)NCBI
Cytogenetic Map7q11NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-dimethoxyphenol  (ISO)
2-bromohexadecanoic acid  (ISO)
2-hydroxypropanoic acid  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
acrolein  (ISO)
alpha-pinene  (ISO)
aristolochic acid A  (ISO)
Aroclor 1254  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
artesunate  (ISO)
benzo[a]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
bisphenol F  (EXP)
Brodifacoum  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
chloropicrin  (ISO)
chromium(6+)  (ISO)
CU-O LINKAGE  (ISO)
cyclosporin A  (ISO)
decabromodiphenyl ether  (ISO)
diarsenic trioxide  (ISO)
dicrotophos  (ISO)
disodium selenite  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
fenthion  (ISO)
folic acid  (ISO)
folpet  (ISO)
formaldehyde  (ISO)
furfural  (ISO)
gentamycin  (EXP)
GSK-J4  (ISO)
ivermectin  (ISO)
lead(0)  (ISO)
methidathion  (ISO)
methoxychlor  (EXP)
methyl methanesulfonate  (ISO)
Monobutylphthalate  (ISO)
nickel atom  (ISO)
nickel subsulfide  (EXP)
ozone  (EXP,ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
quercetin  (ISO)
quinoline  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
rotenone  (EXP)
sarin  (ISO)
selenium atom  (ISO)
sodium arsenite  (ISO)
sodium chloride  (ISO)
sunitinib  (ISO)
thapsigargin  (ISO)
titanium dioxide  (ISO)
tributylstannane  (EXP)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
valproic acid  (ISO)
vincristine  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9488445   PMID:12477932   PMID:20458337   PMID:21071677   PMID:22206666   PMID:23376485   PMID:23662692   PMID:35352799  


Genomics

Comparative Map Data
Naca
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr871,053,474 - 1,066,606 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl71,054,338 - 1,066,605 (+)EnsemblGRCr8
mRatBN7.27468,862 - 481,992 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7469,723 - 481,992 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx73,227,925 - 3,240,227 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.075,103,937 - 5,116,239 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.075,401,559 - 5,413,834 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.072,458,283 - 2,470,674 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl72,458,264 - 2,470,674 (+)Ensemblrn6Rnor6.0
Rnor_5.072,437,474 - 2,450,445 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.471,330,795 - 1,342,502 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera7349,093 - 361,347 (+)NCBICelera
RGSC_v3.171,330,206 - 1,342,498 (+)NCBI
Cytogenetic Map7q11NCBI
NACA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381256,712,427 - 56,725,299 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1256,712,305 - 56,731,628 (-)Ensemblhg38GRCh38
GRCh371257,106,211 - 57,119,083 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361255,392,486 - 55,405,318 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341255,392,486 - 55,405,318NCBI
Celera1256,760,235 - 56,773,290 (-)NCBICelera
Cytogenetic Map12q13.3NCBI
HuRef1254,144,919 - 54,157,979 (-)NCBIHuRef
CHM1_11257,074,331 - 57,086,908 (-)NCBICHM1_1
T2T-CHM13v2.01256,680,428 - 56,693,231 (-)NCBIT2T-CHM13v2.0
Naca
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910127,869,144 - 127,884,506 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10127,871,444 - 127,884,506 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm3810128,035,346 - 128,048,637 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10128,035,575 - 128,048,637 (+)Ensemblmm10GRCm38
MGSCv3710127,472,402 - 127,485,693 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv3610127,438,522 - 127,451,582 (+)NCBIMGSCv36mm8
Celera10130,429,964 - 130,443,255 (+)NCBICelera
Cytogenetic Map10D3NCBI
cM Map1076.39NCBI
Naca
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554584,248,599 - 4,265,584 (-)Ensembl
ChiLan1.0NW_0049554584,251,679 - 4,265,430 (-)NCBIChiLan1.0ChiLan1.0
LOC100995452
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21037,596,670 - 37,610,536 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11237,594,153 - 37,607,305 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01232,180,823 - 32,195,645 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11232,434,366 - 32,447,510 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1232,434,366 - 32,447,510 (+)EnsemblpanPan2panpan1.1
NACA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.110938,682 - 949,103 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl10938,683 - 949,032 (-)EnsemblcanFam3CanFam3.1
CanFam3.1 Ensembl759,858,761 - 59,859,408 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha101,001,345 - 1,013,850 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.010947,647 - 960,206 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl10947,648 - 960,206 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.110924,757 - 937,259 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0101,166,677 - 1,179,175 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0101,291,318 - 1,303,824 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Naca
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494557,840,215 - 57,852,744 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366461,017,443 - 1,030,135 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049366461,017,491 - 1,030,130 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NACA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1522,044,569 - 22,058,096 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2523,718,960 - 23,751,979 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NACA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11152,655,199 - 52,670,143 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606317,172,014 - 17,172,754 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in Naca
79 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:131
Count of miRNA genes:101
Interacting mature miRNAs:107
Transcripts:ENSRNOT00000003550, ENSRNOT00000075681
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300176Hrtrt10Heart rate QTL 103.19heart pumping trait (VT:2000009)heart rate (CMO:0000002)7123748937Rat
2298550Neuinf6Neuroinflammation QTL 63.3nervous system integrity trait (VT:0010566)spinal cord RT1-B protein level (CMO:0002132)7129716167Rat
2290372Gluco33Glucose level QTL 332.71blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)7131777942Rat
1300149Cm6Cardiac mass QTL 64.09heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)71104117804Rat
724560Plsm3Polydactyly-luxate syndrome (PLS) morphotypes QTL 30.0003tibia length (VT:0004357)tibia length (CMO:0000450)7134650782Rat
9590142Scort5Serum corticosterone level QTL 524.40.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)7132612984Rat
1582260Bw72Body weight QTL 723.20.0043body mass (VT:0001259)body weight (CMO:0000012)7139960528Rat
1582261Bw69Body weight QTL 693.20.0048body mass (VT:0001259)body weight (CMO:0000012)7139960528Rat
1582262Bw75Body weight QTL 7530.0038body mass (VT:0001259)body weight (CMO:0000012)7139960528Rat
7411566Bw136Body weight QTL 13610.40.001body mass (VT:0001259)body weight gain (CMO:0000420)7132612984Rat

Markers in Region
RH138645  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27477,900 - 478,033 (+)MAPPERmRatBN7.2
Rnor_6.072,466,447 - 2,466,579NCBIRnor6.0
Rnor_5.072,446,218 - 2,446,350UniSTSRnor5.0
RGSC_v3.471,338,412 - 1,338,544UniSTSRGSC3.4
Celera7357,257 - 357,389UniSTS
Cytogenetic Map7q11UniSTS
UniSTS:236920  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27480,914 - 481,676 (+)MAPPERmRatBN7.2
Rnor_6.072,469,597 - 2,470,358NCBIRnor6.0
Rnor_5.072,449,368 - 2,450,129UniSTSRnor5.0
RGSC_v3.471,341,425 - 1,342,186UniSTSRGSC3.4
Celera7360,270 - 361,031UniSTS
Cytogenetic Map7q11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000003550   ⟹   ENSRNOP00000003550
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl71,054,364 - 1,066,603 (+)Ensembl
mRatBN7.2 Ensembl7469,723 - 481,985 (+)Ensembl
Rnor_6.0 Ensembl72,458,264 - 2,470,669 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000075681   ⟹   ENSRNOP00000066181
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl71,054,338 - 1,066,601 (+)Ensembl
mRatBN7.2 Ensembl7470,595 - 481,992 (+)Ensembl
Rnor_6.0 Ensembl72,459,141 - 2,470,674 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000085092   ⟹   ENSRNOP00000075523
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl71,054,357 - 1,066,605 (+)Ensembl
mRatBN7.2 Ensembl7469,747 - 481,992 (+)Ensembl
Rnor_6.0 Ensembl72,458,833 - 2,470,674 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000125870   ⟹   ENSRNOP00000099310
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl71,054,338 - 1,066,601 (+)Ensembl
RefSeq Acc Id: NM_001105939   ⟹   NP_001099409
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr871,054,902 - 1,066,606 (+)NCBI
mRatBN7.27470,287 - 481,992 (+)NCBI
Rnor_6.072,458,833 - 2,470,674 (+)NCBI
Rnor_5.072,437,474 - 2,450,445 (+)NCBI
RGSC_v3.471,330,795 - 1,342,502 (+)RGD
Celera7349,643 - 361,347 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001198562   ⟹   NP_001185491
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr871,054,319 - 1,066,606 (+)NCBI
mRatBN7.27469,704 - 481,992 (+)NCBI
Rnor_6.072,458,283 - 2,470,674 (+)NCBI
Rnor_5.072,437,474 - 2,450,445 (+)NCBI
Celera7349,093 - 361,347 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001198580   ⟹   NP_001185509
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr871,055,210 - 1,066,606 (+)NCBI
mRatBN7.27470,595 - 481,992 (+)NCBI
Rnor_6.072,459,141 - 2,470,674 (+)NCBI
Rnor_5.072,437,474 - 2,450,445 (+)NCBI
Celera7349,951 - 361,347 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039078540   ⟹   XP_038934468
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr871,053,474 - 1,066,602 (+)NCBI
mRatBN7.27468,862 - 481,988 (+)NCBI
RefSeq Acc Id: XM_039078541   ⟹   XP_038934469
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr871,054,511 - 1,066,602 (+)NCBI
mRatBN7.27469,901 - 481,988 (+)NCBI
RefSeq Acc Id: NP_001099409   ⟸   NM_001105939
- Peptide Label: isoform 1
- UniProtKB: B2RYX0 (UniProtKB/TrEMBL),   A0A0G2KAT8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001185491   ⟸   NM_001198562
- Peptide Label: isoform 1
- UniProtKB: B2RYX0 (UniProtKB/TrEMBL),   A0A0G2KAT8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001185509   ⟸   NM_001198580
- Peptide Label: isoform 2
- UniProtKB: M0R9L0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000075523   ⟸   ENSRNOT00000085092
Ensembl Acc Id: ENSRNOP00000066181   ⟸   ENSRNOT00000075681
Ensembl Acc Id: ENSRNOP00000003550   ⟸   ENSRNOT00000003550
RefSeq Acc Id: XP_038934468   ⟸   XM_039078540
- Peptide Label: isoform X1
- UniProtKB: M0R9L0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038934469   ⟸   XM_039078541
- Peptide Label: isoform X1
- UniProtKB: M0R9L0 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000099310   ⟸   ENSRNOT00000125870
Protein Domains
NAC-A/B

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-M0R9L0-F1-model_v2 AlphaFold M0R9L0 1-2163 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13694920
Promoter ID:EPDNEW_R5445
Type:initiation region
Name:Naca_1
Description:nascent polypeptide-associated complex alpha subunit
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.072,458,310 - 2,458,370EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1308642 AgrOrtholog
BioCyc Gene G2FUF-35401 BioCyc
Ensembl Genes ENSRNOG00000002632 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000003550 ENTREZGENE
  ENSRNOT00000003550.9 UniProtKB/TrEMBL
  ENSRNOT00000075681 ENTREZGENE
  ENSRNOT00000075681.5 UniProtKB/TrEMBL
  ENSRNOT00000085092 ENTREZGENE
  ENSRNOT00000085092.3 UniProtKB/TrEMBL
  ENSRNOT00000125870 ENTREZGENE
  ENSRNOT00000125870.1 UniProtKB/TrEMBL
Gene3D-CATH 2.20.70.30 UniProtKB/TrEMBL
  DNA helicase RuvA subunit, C-terminal domain UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:6922001 IMAGE-MGC_LOAD
InterPro EGD2/NACA UniProtKB/TrEMBL
  NAC-like_UBA UniProtKB/TrEMBL
  NAC_A/B_dom_sf UniProtKB/TrEMBL
  Nas_poly-pep-assoc_cplx_dom UniProtKB/TrEMBL
KEGG Report rno:288770 UniProtKB/TrEMBL
MGC_CLONE MGC:188929 IMAGE-MGC_LOAD
NCBI Gene 288770 ENTREZGENE
PANTHER PTHR21713 UniProtKB/TrEMBL
Pfam HYPK_UBA UniProtKB/TrEMBL
  NAC UniProtKB/TrEMBL
PhenoGen Naca PhenoGen
PIRSF NAC_alpha UniProtKB/TrEMBL
PRINTS PRICHEXTENSN UniProtKB/TrEMBL
PROSITE NAC_AB UniProtKB/TrEMBL
RatGTEx ENSRNOG00000002632 RatGTEx
SMART NAC UniProtKB/TrEMBL
UniProt A0A0G2KAT8 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LC15_RAT UniProtKB/TrEMBL
  B2RYX0 ENTREZGENE, UniProtKB/TrEMBL
  F7F1W2_RAT UniProtKB/TrEMBL
  M0R9L0 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-18 Naca  nascent polypeptide associated complex subunit alpha  Naca  nascent polypeptide-associated complex alpha subunit  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-04-23 Naca  nascent polypeptide-associated complex alpha subunit  Naca  nascent-polypeptide-associated complex alpha polypeptide  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Naca  nascent-polypeptide-associated complex alpha polypeptide   Naca_predicted  nascent-polypeptide-associated complex alpha polypeptide (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Naca_predicted  nascent-polypeptide-associated complex alpha polypeptide (predicted)      Symbol and Name status set to approved 70820 APPROVED