Spock2 (SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2) - Rat Genome Database

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Gene: Spock2 (SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2) Rattus norvegicus
Analyze
Symbol: Spock2
Name: SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2
RGD ID: 1308568
Description: Predicted to enable several functions, including calcium ion binding activity; collagen binding activity; and glycosaminoglycan binding activity. Predicted to act upstream of or within cellular response to leukemia inhibitory factor; extracellular matrix organization; and positive regulation of cell-substrate adhesion. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Orthologous to human SPOCK2 (SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2); INTERACTS WITH 17alpha-ethynylestradiol; 4,4'-sulfonyldiphenol; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC361840; sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2; sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2; testican-2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82028,580,262 - 28,607,198 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2028,580,226 - 28,608,409 (+)EnsemblGRCr8
mRatBN7.22028,037,334 - 28,064,272 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2028,033,475 - 28,064,272 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2029,048,580 - 29,071,430 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02028,434,872 - 28,457,722 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02029,177,432 - 29,200,437 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.02029,654,926 - 29,679,927 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2029,655,226 - 29,677,926 (+)Ensemblrn6Rnor6.0
Rnor_5.02031,456,540 - 31,479,492 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42027,397,527 - 27,425,914 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2029,477,748 - 29,500,667 (+)NCBICelera
RGSC_v3.12027,411,413 - 27,435,907 (+)NCBI
Cytogenetic Map20q11NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. GOA pipeline RGD automated data pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10386950   PMID:18757743   PMID:20439489   PMID:25931508   PMID:38388415  


Genomics

Comparative Map Data
Spock2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82028,580,262 - 28,607,198 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2028,580,226 - 28,608,409 (+)EnsemblGRCr8
mRatBN7.22028,037,334 - 28,064,272 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2028,033,475 - 28,064,272 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2029,048,580 - 29,071,430 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02028,434,872 - 28,457,722 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02029,177,432 - 29,200,437 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.02029,654,926 - 29,679,927 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2029,655,226 - 29,677,926 (+)Ensemblrn6Rnor6.0
Rnor_5.02031,456,540 - 31,479,492 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42027,397,527 - 27,425,914 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2029,477,748 - 29,500,667 (+)NCBICelera
RGSC_v3.12027,411,413 - 27,435,907 (+)NCBI
Cytogenetic Map20q11NCBI
SPOCK2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381072,059,034 - 72,089,032 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1072,059,034 - 72,089,032 (-)Ensemblhg38GRCh38
GRCh371073,818,792 - 73,848,790 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361073,488,799 - 73,518,773 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341073,488,798 - 73,518,773NCBI
Celera1067,102,339 - 67,132,032 (-)NCBICelera
Cytogenetic Map10q22.1NCBI
HuRef1067,813,453 - 67,843,146 (-)NCBIHuRef
CHM1_11074,100,901 - 74,130,549 (-)NCBICHM1_1
T2T-CHM13v2.01072,929,867 - 72,959,865 (-)NCBIT2T-CHM13v2.0
Spock2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391059,942,079 - 59,971,020 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1059,942,041 - 59,971,020 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381060,106,257 - 60,135,198 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1060,106,219 - 60,135,198 (+)Ensemblmm10GRCm38
MGSCv371059,569,005 - 59,596,662 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361059,501,614 - 59,529,271 (+)NCBIMGSCv36mm8
Celera1061,203,932 - 61,231,626 (+)NCBICelera
Cytogenetic Map10B4NCBI
cM Map1029.69NCBI
Spock2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543719,494,536 - 19,515,884 (+)Ensembl
ChiLan1.0NW_00495543719,494,102 - 19,519,218 (+)NCBIChiLan1.0ChiLan1.0
SPOCK2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2884,202,508 - 84,232,176 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11084,207,830 - 84,237,497 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01068,522,002 - 68,552,001 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11071,045,046 - 71,074,946 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1071,048,773 - 71,074,203 (-)EnsemblpanPan2panpan1.1
SPOCK2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1422,744,922 - 22,771,542 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl422,748,458 - 22,771,239 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha422,881,071 - 22,907,622 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0423,026,187 - 23,052,766 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl423,026,187 - 23,052,847 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1422,925,742 - 22,952,288 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0423,126,170 - 23,152,734 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0423,479,838 - 23,506,402 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Spock2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721358,307,180 - 58,330,179 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365216,800,440 - 6,822,445 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365216,799,823 - 6,823,917 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SPOCK2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1474,938,166 - 74,968,018 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11474,938,164 - 74,968,126 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21480,896,575 - 80,908,366 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SPOCK2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1959,213,198 - 59,242,752 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl959,213,553 - 59,243,703 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604819,853,658 - 19,883,322 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Spock2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247545,870,357 - 5,897,029 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247545,866,872 - 5,897,270 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Spock2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11825,920,731 - 25,947,177 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Spock2
216 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:84
Count of miRNA genes:59
Interacting mature miRNAs:70
Transcripts:ENSRNOT00000000698
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4889610Pancm3Pancreatic morphology QTL 33.750.001pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)20418947649189476Rat
2303587Bw93Body weight QTL 9313body mass (VT:0001259)body weight (CMO:0000012)202668936256021148Rat
1641915Colcr9Colorectal carcinoma resistance QTL 92.970.0024intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)20133724594Rat
4889870Pur30Proteinuria QTL 30190.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)20804392029865039Rat
7411668Foco32Food consumption QTL 3280.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20136600300Rat
2305926Iddm37Insulin dependent diabetes mellitus QTL 376blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)20153308346533083Rat
1558640Prcs2Prostate cancer susceptibility QTL 23.3prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)20134066551Rat
8694189Bw153Body weight QTL 1533.130.001body mass (VT:0001259)body weight gain (CMO:0000420)20129193376Rat
2303626Vencon10Ventilatory control QTL 100.001respiration trait (VT:0001943)respiration rate (CMO:0000289)202074558556021148Rat
1598869Memor6Memory QTL 63.1exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)202668936256021148Rat
1598870Bp289Blood pressure QTL 2892.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)20821635953216359Rat
9590109Sffal8Serum free fatty acids level QTL 85.320.01blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)20129193376Rat
9589155Insul32Insulin level QTL 326.380.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)20129193376Rat
9590275Scort15Serum corticosterone level QTL 153.480.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20129193376Rat
1598858Cm61Cardiac mass QTL 613.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)20821635953216359Rat
7411650Foco23Food consumption QTL 2320.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20129193376Rat
1331747Hrtrt16Heart rate QTL 163.163heart pumping trait (VT:2000009)heart rate (CMO:0000002)202679235356021148Rat
1598816Memor12Memory QTL 122.4exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)201224324249189476Rat
2303578Gluco50Glucose level QTL 502blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)202668936256021148Rat
6893685Bw111Body weight QTL 1112.70.004body mass (VT:0001259)body weight (CMO:0000012)20132578510Rat
9590252Scort12Serum corticosterone level QTL 1220.460.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20136600300Rat
2300188Bmd68Bone mineral density QTL 686.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)202668936256021148Rat

Markers in Region
D20Got29  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22028,048,813 - 28,049,045 (+)MAPPERmRatBN7.2
Rnor_6.02029,666,261 - 29,666,492NCBIRnor6.0
Rnor_5.02031,467,230 - 31,467,462UniSTSRnor5.0
RGSC_v3.42027,409,865 - 27,410,097RGDRGSC3.4
RGSC_v3.42027,409,866 - 27,410,097UniSTSRGSC3.4
Celera2029,489,029 - 29,489,242UniSTS
RGSC_v3.12027,423,665 - 27,423,897RGD
Cytogenetic Map20q11UniSTS
RH125661  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22028,063,950 - 28,064,200 (+)MAPPERmRatBN7.2
Rnor_6.02029,681,390 - 29,681,639NCBIRnor6.0
Rnor_5.02031,482,234 - 31,482,483UniSTSRnor5.0
RGSC_v3.42027,425,593 - 27,425,842UniSTSRGSC3.4
Celera2029,504,093 - 29,504,342UniSTS
Cytogenetic Map20q11UniSTS
AU049334  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22028,060,610 - 28,060,776 (+)MAPPERmRatBN7.2
Rnor_6.02029,678,058 - 29,678,223NCBIRnor6.0
Rnor_5.02031,479,094 - 31,479,259UniSTSRnor5.0
RGSC_v3.42027,421,663 - 27,421,828UniSTSRGSC3.4
Celera2029,500,799 - 29,500,968UniSTS
Cytogenetic Map20q11UniSTS
MARC_12153-12154:1004708400:3  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr82028,598,633 - 28,599,338 (+)Marker Load Pipeline
mRatBN7.22028,055,705 - 28,056,410 (+)MAPPERmRatBN7.2
Rnor_6.02029,673,153 - 29,673,857NCBIRnor6.0
Rnor_5.02031,474,042 - 31,474,746UniSTSRnor5.0
RGSC_v3.42027,416,758 - 27,417,462UniSTSRGSC3.4
Celera2029,495,894 - 29,496,598UniSTS
Cytogenetic Map20q11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 163 91 90 59 87 59 6 351 187 11 141 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000089059   ⟹   ENSRNOP00000074856
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2028,580,321 - 28,607,207 (+)Ensembl
mRatBN7.2 Ensembl2028,037,592 - 28,064,272 (+)Ensembl
Rnor_6.0 Ensembl2029,655,226 - 29,677,926 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000099193   ⟹   ENSRNOP00000094578
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2028,580,321 - 28,607,207 (+)Ensembl
mRatBN7.2 Ensembl2028,033,475 - 28,064,272 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000104630   ⟹   ENSRNOP00000077835
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2028,580,321 - 28,607,207 (+)Ensembl
mRatBN7.2 Ensembl2028,033,475 - 28,064,272 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000109516   ⟹   ENSRNOP00000080835
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2028,580,520 - 28,607,207 (+)Ensembl
mRatBN7.2 Ensembl2028,037,592 - 28,064,272 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000137212   ⟹   ENSRNOP00000112670
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2028,580,226 - 28,608,409 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000137974   ⟹   ENSRNOP00000110719
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2028,580,321 - 28,604,408 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000164006   ⟹   ENSRNOP00000104601
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2028,580,363 - 28,604,066 (+)Ensembl
RefSeq Acc Id: NM_001108533   ⟹   NP_001102003
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82028,580,262 - 28,607,198 (+)NCBI
mRatBN7.22028,037,334 - 28,064,272 (+)NCBI
Rnor_6.02029,655,226 - 29,677,926 (+)NCBI
Rnor_5.02031,456,540 - 31,479,492 (+)NCBI
RGSC_v3.42027,397,527 - 27,425,914 (+)RGD
Celera2029,477,748 - 29,500,667 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001102003 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL93055 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000074856
  ENSRNOP00000074856.3
  ENSRNOP00000077835.1
  ENSRNOP00000080835.1
  ENSRNOP00000094578.2
  ENSRNOP00000104601.1
  ENSRNOP00000110719.1
  ENSRNOP00000112670.1
RefSeq Acc Id: NP_001102003   ⟸   NM_001108533
- Peptide Label: precursor
- UniProtKB: A0A8I6AI26 (UniProtKB/TrEMBL),   A6K3W7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000074856   ⟸   ENSRNOT00000089059
Ensembl Acc Id: ENSRNOP00000080835   ⟸   ENSRNOT00000109516
Ensembl Acc Id: ENSRNOP00000094578   ⟸   ENSRNOT00000099193
Ensembl Acc Id: ENSRNOP00000077835   ⟸   ENSRNOT00000104630
Ensembl Acc Id: ENSRNOP00000110719   ⟸   ENSRNOT00000137974
Ensembl Acc Id: ENSRNOP00000104601   ⟸   ENSRNOT00000164006
Ensembl Acc Id: ENSRNOP00000112670   ⟸   ENSRNOT00000137212
Protein Domains
Kazal-like   Thyroglobulin type-1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K946-F1-model_v2 AlphaFold A0A0G2K946 1-425 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1308568 AgrOrtholog
BioCyc Gene G2FUF-3747 BioCyc
Ensembl Genes ENSRNOG00000061544 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000089059 ENTREZGENE
  ENSRNOT00000089059.3 UniProtKB/TrEMBL
  ENSRNOT00000099193.2 UniProtKB/TrEMBL
  ENSRNOT00000104630.2 UniProtKB/TrEMBL
  ENSRNOT00000109516.2 UniProtKB/TrEMBL
  ENSRNOT00000137212.1 UniProtKB/TrEMBL
  ENSRNOT00000137974.1 UniProtKB/TrEMBL
  ENSRNOT00000164006.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.60.30 UniProtKB/TrEMBL
  4.10.800.10 UniProtKB/TrEMBL
  EF-hand UniProtKB/TrEMBL
InterPro EF-hand-like_dom UniProtKB/TrEMBL
  Kazal_dom_sf UniProtKB/TrEMBL
  Prot_inh_Kazal UniProtKB/TrEMBL
  SPARC/Testican_Ca-bd-dom UniProtKB/TrEMBL
  Thyroglobulin_1 UniProtKB/TrEMBL
  Thyroglobulin_1_sf UniProtKB/TrEMBL
KEGG Report rno:361840 UniProtKB/TrEMBL
NCBI Gene 361840 ENTREZGENE
PANTHER SPARC OSTEONECTIN UniProtKB/TrEMBL
  TESTICAN-2 UniProtKB/TrEMBL
Pfam Kazal_2 UniProtKB/TrEMBL
  SPARC_Ca_bdg UniProtKB/TrEMBL
  Thyroglobulin_1 UniProtKB/TrEMBL
PhenoGen Spock2 PhenoGen
PROSITE KAZAL_2 UniProtKB/TrEMBL
  THYROGLOBULIN_1_1 UniProtKB/TrEMBL
  THYROGLOBULIN_1_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000061544 RatGTEx
SMART KAZAL UniProtKB/TrEMBL
  SM00211 UniProtKB/TrEMBL
Superfamily-SCOP SSF100895 UniProtKB/TrEMBL
  SSF47473 UniProtKB/TrEMBL
  Thyroglobulin_1 UniProtKB/TrEMBL
UniProt A0A0G2K946_RAT UniProtKB/TrEMBL
  A0A8I5Y6E3_RAT UniProtKB/TrEMBL
  A0A8I5ZQG2_RAT UniProtKB/TrEMBL
  A0A8I6AI26 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LM78_RAT UniProtKB/TrEMBL
  A0ABK0M3A9_RAT UniProtKB/TrEMBL
  A0ABK0M854_RAT UniProtKB/TrEMBL
  A6K3W7 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-19 Spock2  SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2  Spock2  sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-10-16 Spock2  sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2  Spock2  sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Spock2  sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2   Spock2_predicted  sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Spock2_predicted  sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 (predicted)      Symbol and Name status set to approved 70820 APPROVED