Rab11fip2 (RAB11 family interacting protein 2) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Rab11fip2 (RAB11 family interacting protein 2) Rattus norvegicus
Analyze
Symbol: Rab11fip2
Name: RAB11 family interacting protein 2
RGD ID: 1308538
Description: Predicted to enable protein homodimerization activity and protein kinase binding activity. Involved in positive regulation of protein localization to plasma membrane. Predicted to be located in plasma membrane and recycling endosome membrane. Predicted to be active in endosome and phagocytic cup. Orthologous to human RAB11FIP2 (RAB11 family interacting protein 2); PARTICIPATES IN vasopressin signaling pathway; vasopressin signaling pathway via receptor type 2; endocytosis pathway; INTERACTS WITH 17alpha-ethynylestradiol; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC108349712; LOC308003; RAB11 family interacting protein 2 (class I); rab11 family-interacting protein 2; rab11-family interacting protein 2; Rab11-FIP2; RGD1308538; similar to KIAA0941 protein; uncharacterized LOC108349712
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81268,908,825 - 269,080,691 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1268,909,413 - 269,079,661 (-)EnsemblGRCr8
mRatBN7.21258,950,535 - 259,094,555 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1258,923,873 - 259,093,752 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1267,264,170 - 267,299,888 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01273,970,206 - 274,005,924 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01266,616,423 - 266,652,133 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01281,065,346 - 281,101,163 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1281,065,168 - 281,101,438 (-)Ensemblrn6Rnor6.0
Rnor_5.01288,422,015 - 288,457,832 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41266,461,752 - 266,497,576 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1254,705,763 - 254,741,674 (-)NCBICelera
RGSC_v3.11266,672,789 - 266,713,588 (-)NCBI
Cytogenetic Map1q55NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Physiology and pathophysiology of the vasopressin-regulated renal water reabsorption. Boone M and Deen PM, Pflugers Arch. 2008 Sep;456(6):1005-24. Epub 2008 Apr 23.
2. Requirement of myosin Vb.Rab11a.Rab11-FIP2 complex in cholesterol-regulated translocation of NPC1L1 to the cell surface. Chu BB, etal., J Biol Chem. 2009 Aug 14;284(33):22481-90. doi: 10.1074/jbc.M109.034355. Epub 2009 Jun 19.
3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4. A Role of myosin Vb and Rab11-FIP2 in the aquaporin-2 shuttle. Nedvetsky PI, etal., Traffic. 2007 Feb;8(2):110-23. Epub 2006 Dec 6.
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:12477932   PMID:16775013   PMID:16905101   PMID:17728463   PMID:19335615   PMID:20534835   PMID:23554492   PMID:25931508   PMID:30883606   PMID:31757887  


Genomics

Comparative Map Data
Rab11fip2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81268,908,825 - 269,080,691 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1268,909,413 - 269,079,661 (-)EnsemblGRCr8
mRatBN7.21258,950,535 - 259,094,555 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1258,923,873 - 259,093,752 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1267,264,170 - 267,299,888 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01273,970,206 - 274,005,924 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01266,616,423 - 266,652,133 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01281,065,346 - 281,101,163 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1281,065,168 - 281,101,438 (-)Ensemblrn6Rnor6.0
Rnor_5.01288,422,015 - 288,457,832 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41266,461,752 - 266,497,576 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1254,705,763 - 254,741,674 (-)NCBICelera
RGSC_v3.11266,672,789 - 266,713,588 (-)NCBI
Cytogenetic Map1q55NCBI
RAB11FIP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810118,004,916 - 118,046,941 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10118,004,916 - 118,046,941 (-)Ensemblhg38GRCh38
GRCh3710119,764,427 - 119,806,452 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3610119,754,419 - 119,796,104 (-)NCBIBuild 36Build 36hg18NCBI36
Build 3410119,754,418 - 119,796,104NCBI
Celera10113,494,224 - 113,535,915 (-)NCBICelera
Cytogenetic Map10q26.11NCBI
HuRef10113,392,863 - 113,434,552 (-)NCBIHuRef
CHM1_110120,048,435 - 120,090,122 (-)NCBICHM1_1
T2T-CHM13v2.010118,898,958 - 118,940,990 (-)NCBIT2T-CHM13v2.0
Rab11fip2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391959,881,934 - 59,933,086 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1959,891,316 - 59,932,086 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381959,893,502 - 59,943,656 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1959,902,884 - 59,943,654 (-)Ensemblmm10GRCm38
MGSCv371959,978,787 - 60,019,557 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361959,958,359 - 59,998,027 (-)NCBIMGSCv36mm8
Celera1962,094,408 - 62,135,218 (-)NCBICelera
Cytogenetic Map19D3NCBI
cM Map1956.28NCBI
Rab11fip2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543122,634,103 - 22,674,107 (-)Ensembl
ChiLan1.0NW_00495543122,637,605 - 22,674,107 (-)NCBIChiLan1.0ChiLan1.0
RAB11FIP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28129,865,455 - 129,907,443 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110129,870,793 - 129,912,003 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v010114,577,851 - 114,619,808 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.110118,003,025 - 118,044,607 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10117,970,693 - 118,044,607 (-)EnsemblpanPan2panpan1.1
RAB11FIP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12828,415,139 - 28,457,215 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2828,415,639 - 28,457,286 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2828,531,739 - 28,600,617 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02828,917,842 - 28,986,521 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2828,944,943 - 28,986,369 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12828,478,894 - 28,547,486 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02828,493,741 - 28,562,416 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02828,688,873 - 28,757,762 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Rab11fip2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721317,831,562 - 17,868,725 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364867,691,752 - 7,729,742 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364867,692,577 - 7,729,736 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RAB11FIP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14128,068,959 - 128,110,512 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.114128,068,085 - 128,110,949 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214139,582,795 - 139,625,498 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RAB11FIP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.19110,805,236 - 110,846,691 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl9110,805,022 - 110,846,830 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604872,061,961 - 72,103,670 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rab11fip2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473728,634,079 - 28,686,886 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473728,633,815 - 28,675,773 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Rab11fip2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1256,188,776 - 56,229,048 (+)NCBIRrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:25
Count of miRNA genes:22
Interacting mature miRNAs:24
Transcripts:ENSRNOT00000012734
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
634313Niddm43Non-insulin dependent diabetes mellitus QTL 43blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1208479811269633915Rat
1549910Bw54Body weight QTL 540.05body mass (VT:0001259)body weight (CMO:0000012)1263946994269633915Rat
70211Niddm24Non-insulin dependent diabetes mellitus QTL 243.79blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1224633915269633915Rat
724552Glom2Glomerulus QTL 23.30.0001kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)1232312773270518180Rat
61327Eae7Experimental allergic encephalomyelitis QTL 75.6body mass (VT:0001259)change in body weight (CMO:0002045)1226175591270518180Rat
1578775Iddm21Insulin dependent diabetes mellitus QTL 214.13blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1245782829270518180Rat
631837Niddm35Non-insulin dependent diabetes mellitus QTL 350.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1248619887269633915Rat
1600397Edcs4Endometrial carcinoma susceptibility QTL 42.2uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)1176288899270518180Rat
631836Stl31Serum triglyceride level QTL 314.645e-06blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)1247133834270518180Rat
1549837Hcar15Hepatocarcinoma resistance QTL 150.05liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1162548015270518180Rat
1600390Niddm64Non-insulin dependent diabetes mellitus QTL 640.003blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1257624997270518180Rat
1300108Rf8Renal function QTL 83.75renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)1237995023269633915Rat
734767Niddm57Non-insulin dependent diabetes mellitus QTL 57body mass (VT:0001259)body weight (CMO:0000012)1233480549270108840Rat
631215Stl8Serum triglyceride level QTL 89.270.0001blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1234540191270518180Rat
7387289Uae45Urinary albumin excretion QTL 452.860.0021urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1233204160270518180Rat
631843Bw116Body weight QTL 1164.10.016abdominal adipose amount (VT:1000220)abdominal fat pad weight (CMO:0000088)1233480549270108840Rat
731175Uae20Urinary albumin excretion QTL 203.50.0018urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1207163993269633915Rat
1598839Rf56Renal function QTL 56renal blood flow trait (VT:2000006)ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)1255849111270518180Rat
1581544Rf52Renal function QTL 520.05urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)1241569529269633915Rat
631536Lnnr2Liver neoplastic nodule remodeling QTL 22.90.0005liver integrity trait (VT:0010547)liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)1243953669270518180Rat
734769Niddm58Non-insulin dependent diabetes mellitus QTL 58body mass (VT:0001259)body weight (CMO:0000012)1225108840270108840Rat
738032Hcas5Hepatocarcinoma susceptibility QTL 53.12liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1185857683270518180Rat
2302040Pia35Pristane induced arthritis QTL 353.80.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)1226175591270518180Rat
631669Iddm9Insulin dependent diabetes mellitus QTL 92.80.039blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1233349180270518180Rat
1598821Rf55Renal function QTL 556.3renal blood flow trait (VT:2000006)ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)1228174566270518180Rat

Markers in Region
AW558126  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21259,054,309 - 259,054,394 (+)MAPPERmRatBN7.2
Rnor_6.01281,061,879 - 281,061,963NCBIRnor6.0
Rnor_5.01288,418,548 - 288,418,632UniSTSRnor5.0
RGSC_v3.41266,458,285 - 266,458,369UniSTSRGSC3.4
Celera1254,702,296 - 254,702,380UniSTS
Cytogenetic Map1q55UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 163 91 90 59 91 59 6 354 191 11 142 80 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000012734   ⟹   ENSRNOP00000012734
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1269,043,137 - 269,079,661 (-)Ensembl
mRatBN7.2 Ensembl1259,057,078 - 259,093,752 (-)Ensembl
Rnor_6.0 Ensembl1281,065,168 - 281,101,438 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000081218   ⟹   ENSRNOP00000087232
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1268,937,710 - 269,079,661 (-)Ensembl
mRatBN7.2 Ensembl1258,935,647 - 259,093,752 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000097684   ⟹   ENSRNOP00000088001
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1268,909,413 - 269,079,661 (-)Ensembl
mRatBN7.2 Ensembl1258,923,873 - 259,093,752 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000102047   ⟹   ENSRNOP00000087438
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1268,984,480 - 269,079,661 (-)Ensembl
mRatBN7.2 Ensembl1258,998,616 - 259,093,752 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000108108   ⟹   ENSRNOP00000095948
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1258,935,647 - 259,093,752 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000115594   ⟹   ENSRNOP00000091347
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1259,053,812 - 259,093,752 (-)Ensembl
RefSeq Acc Id: NM_001107447   ⟹   NP_001100917
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81269,043,836 - 269,079,661 (-)NCBI
mRatBN7.21259,057,777 - 259,093,608 (-)NCBI
Rnor_6.01281,065,346 - 281,101,163 (-)NCBI
Rnor_5.01288,422,015 - 288,457,832 (-)NCBI
RGSC_v3.41266,461,752 - 266,497,576 (-)RGD
Celera1254,705,763 - 254,741,674 (-)RGD
Sequence:
RefSeq Acc Id: XM_039110359   ⟹   XP_038966287
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81268,921,760 - 269,080,691 (-)NCBI
mRatBN7.21258,950,535 - 259,094,555 (-)NCBI
RefSeq Acc Id: XM_063288292   ⟹   XP_063144362
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81268,921,761 - 269,080,691 (-)NCBI
RefSeq Acc Id: XM_063288295   ⟹   XP_063144365
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81268,908,825 - 269,080,691 (-)NCBI
RefSeq Acc Id: NP_001100917   ⟸   NM_001107447
- UniProtKB: A0A8I6AF99 (UniProtKB/TrEMBL),   A6JI91 (UniProtKB/TrEMBL),   A0A8I6ASH5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000012734   ⟸   ENSRNOT00000012734
RefSeq Acc Id: XP_038966287   ⟸   XM_039110359
- Peptide Label: isoform X1
- UniProtKB: A0A8I6A6W2 (UniProtKB/TrEMBL),   A0A8I6ASH5 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000088001   ⟸   ENSRNOT00000097684
Ensembl Acc Id: ENSRNOP00000087438   ⟸   ENSRNOT00000102047
Ensembl Acc Id: ENSRNOP00000087232   ⟸   ENSRNOT00000081218
Ensembl Acc Id: ENSRNOP00000095948   ⟸   ENSRNOT00000108108
Ensembl Acc Id: ENSRNOP00000091347   ⟸   ENSRNOT00000115594
RefSeq Acc Id: XP_063144365   ⟸   XM_063288295
- Peptide Label: isoform X1
- UniProtKB: A0A8I6A6W2 (UniProtKB/TrEMBL),   A0A8I6ASH5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063144362   ⟸   XM_063288292
- Peptide Label: isoform X1
- UniProtKB: A0A8I6A6W2 (UniProtKB/TrEMBL),   A0A8I6ASH5 (UniProtKB/TrEMBL)
Protein Domains
C2   FIP-RBD

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZD48-F1-model_v2 AlphaFold D3ZD48 1-512 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1308538 AgrOrtholog
BioCyc Gene G2FUF-55237 BioCyc
Ensembl Genes ENSRNOG00000009523 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000012734 ENTREZGENE
  ENSRNOT00000012734.9 UniProtKB/TrEMBL
  ENSRNOT00000081218 ENTREZGENE
  ENSRNOT00000081218.3 UniProtKB/TrEMBL
  ENSRNOT00000097684.2 UniProtKB/TrEMBL
  ENSRNOT00000102047.2 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.2440 UniProtKB/TrEMBL
  2.60.40.150 UniProtKB/TrEMBL
InterPro C2_Ca-dep UniProtKB/TrEMBL
  C2_domain_sf UniProtKB/TrEMBL
  FIP-RBD_C_sf UniProtKB/TrEMBL
  FIP_classI UniProtKB/TrEMBL
  Rab11-bd_FIP_dom_C UniProtKB/TrEMBL
KEGG Report rno:308003 UniProtKB/TrEMBL
NCBI Gene 308003 ENTREZGENE
PANTHER PTHR15746 UniProtKB/TrEMBL
  RAB11 FAMILY-INTERACTING PROTEIN 2 UniProtKB/TrEMBL
Pfam PF00168 UniProtKB/TrEMBL
  RBD-FIP UniProtKB/TrEMBL
PhenoGen Rab11fip2 PhenoGen
PROSITE FIP_RBD UniProtKB/TrEMBL
  PS50004 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000009523 RatGTEx
SMART SM00239 UniProtKB/TrEMBL
Superfamily-SCOP SSF144270 UniProtKB/TrEMBL
  SSF49562 UniProtKB/TrEMBL
UniProt A0A8I6A5U7_RAT UniProtKB/TrEMBL
  A0A8I6A6W2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A8W0_RAT UniProtKB/TrEMBL
  A0A8I6AF99 ENTREZGENE
  A0A8I6ASH5 ENTREZGENE
  A6JI91 ENTREZGENE, UniProtKB/TrEMBL
  D3ZD48_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Rab11fip2  RAB11 family interacting protein 2  LOC108349712  uncharacterized LOC108349712  Data merged from RGD:11369632 737654 PROVISIONAL
2016-08-02 LOC108349712  uncharacterized LOC108349712      Symbol and Name status set to provisional 70820 PROVISIONAL
2016-05-04 Rab11fip2  RAB11 family interacting protein 2  Rab11fip2  RAB11 family interacting protein 2 (class I)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Rab11fip2  RAB11 family interacting protein 2 (class I)   Rab11fip2_predicted  RAB11 family interacting protein 2 (class I) (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-30 Rab11fip2_predicted  RAB11 family interacting protein 2 (class I) (predicted)  RGD1308538_predicted  similar to KIAA0941 protein; rab11-family interacting protein 2 (predicted)  Symbol and Name updated 1299863 APPROVED
2005-01-20 RGD1308538_predicted  similar to KIAA0941 protein; rab11-family interacting protein 2 (predicted)  LOC308003_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC308003_predicted  similar to KIAA0941 protein; rab11-family interacting protein 2 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL