Symbol:
Mypn
Name:
myopalladin
RGD ID:
1308510
Description:
Predicted to enable SH3 domain binding activity and muscle alpha-actinin binding activity. Predicted to be involved in cell-cell adhesion and sarcomere organization. Located in Z disc and nucleus. Human ortholog(s) of this gene implicated in dilated cardiomyopathy 1KK and nemaline myopathy 11. Orthologous to human MYPN (myopalladin); INTERACTS WITH (S)-nicotine; 1-naphthyl isothiocyanate; 17beta-estradiol.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
LOC309760
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
MYPN (myopalladin) HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):
Mypn (myopalladin) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Mypn (myopalladin) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
MYPN (myopalladin) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
MYPN (myopalladin) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Mypn (myopalladin) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
MYPN (myopalladin) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
MYPN (myopalladin) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Mypn (myopalladin) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Other homologs 2
Homo sapiens (human):
HACD1 (3-hydroxyacyl-CoA dehydratase 1) HGNC
OMA
Alliance orthologs 3
Homo sapiens (human):
MYPN (myopalladin)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Mypn (myopalladin)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
mypn (myopalladin)
Alliance
DIOPT (Ensembl Compara|OrthoFinder|PANTHER|PhylomeDB)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 20 25,435,554 - 25,521,149 (+) NCBI GRCr8 mRatBN7.2 20 25,429,898 - 25,522,443 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 20 25,436,843 - 25,522,443 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 20 26,129,740 - 26,215,377 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 20 25,482,765 - 25,568,401 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 20 26,069,325 - 26,154,935 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 20 26,988,820 - 27,074,106 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 20 26,988,774 - 27,074,138 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 20 28,829,554 - 28,914,644 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 20 25,457,133 - 25,531,818 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 20 25,471,952 - 25,589,885 (-) NCBI Celera 20 26,744,077 - 26,818,492 (+) NCBI Celera Cytogenetic Map 20 p11 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Mypn Rat (-)-epigallocatechin 3-gallate multiple interactions ISO MYPN (Homo sapiens) 6480464 [potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of MYPN mRNA CTD PMID:22079256 Mypn Rat (S)-nicotine decreases expression EXP 6480464 Nicotine results in decreased expression of MYPN mRNA CTD PMID:27782041 Mypn Rat 1-naphthyl isothiocyanate increases expression EXP 6480464 1-Naphthylisothiocyanate results in increased expression of MYPN mRNA CTD PMID:30723492 Mypn Rat 17beta-estradiol decreases expression EXP 6480464 Estradiol results in decreased expression of MYPN mRNA CTD PMID:32145629 Mypn Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression EXP 6480464 Tetrachlorodibenzodioxin affects the expression of MYPN mRNA CTD PMID:22298810 Mypn Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression EXP 6480464 Tetrachlorodibenzodioxin results in decreased expression of MYPN mRNA CTD PMID:32109520 Mypn Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO Mypn (Mus musculus) 6480464 Tetrachlorodibenzodioxin affects the expression of MYPN mRNA CTD PMID:21570461 Mypn Rat 2,3,7,8-Tetrachlorodibenzofuran decreases expression EXP 6480464 2 more ... CTD PMID:32109520 Mypn Rat 3-isobutyl-1-methyl-7H-xanthine multiple interactions ISO MYPN (Homo sapiens) 6480464 [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in decreased expression of MYPN mRNA more ... CTD PMID:28628672 Mypn Rat 4,4'-sulfonyldiphenol multiple interactions ISO MYPN (Homo sapiens) 6480464 [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in decreased expression of MYPN mRNA CTD PMID:28628672 Mypn Rat 4,4'-sulfonyldiphenol decreases methylation ISO Mypn (Mus musculus) 6480464 bisphenol S results in decreased methylation of MYPN exon CTD PMID:33297965 Mypn Rat 8-Br-cAMP increases expression ISO MYPN (Homo sapiens) 6480464 8-Bromo Cyclic Adenosine Monophosphate results in increased expression of MYPN mRNA CTD PMID:22079614 Mypn Rat acetamide increases expression EXP 6480464 acetamide results in increased expression of MYPN mRNA CTD PMID:31881176 Mypn Rat alpha-Zearalanol multiple interactions EXP 6480464 [Zeranol co-treated with perfluorooctanoic acid] results in decreased expression of MYPN mRNA CTD PMID:35163327 Mypn Rat alpha-Zearalanol decreases expression EXP 6480464 Zeranol results in decreased expression of MYPN mRNA CTD PMID:35163327 Mypn Rat aristolochic acid A increases expression ISO MYPN (Homo sapiens) 6480464 aristolochic acid I results in increased expression of MYPN mRNA CTD PMID:33212167 Mypn Rat aristolochic acids decreases expression EXP 6480464 Aristolochic Acids results in decreased expression of MYPN mRNA CTD PMID:21834575 Mypn Rat arsane multiple interactions ISO MYPN (Homo sapiens) 6480464 [sodium arsenite results in increased abundance of Arsenic] which results in increased expression of MYPN mRNA CTD PMID:39836092 Mypn Rat arsenic atom multiple interactions ISO MYPN (Homo sapiens) 6480464 [sodium arsenite results in increased abundance of Arsenic] which results in increased expression of MYPN mRNA CTD PMID:39836092 Mypn Rat atrazine affects methylation EXP 6480464 Atrazine affects the methylation of MYPN gene CTD PMID:28931070 Mypn Rat benzo[a]pyrene decreases expression ISO Mypn (Mus musculus) 6480464 Benzo(a)pyrene results in decreased expression of MYPN mRNA CTD PMID:22228805 Mypn Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of MYPN mRNA CTD PMID:25181051 and PMID:32145629 Mypn Rat bisphenol A decreases methylation ISO MYPN (Homo sapiens) 6480464 bisphenol A results in decreased methylation of MYPN gene CTD PMID:31601247 Mypn Rat bisphenol A decreases expression ISO MYPN (Homo sapiens) 6480464 bisphenol A results in decreased expression of MYPN mRNA CTD PMID:29275510 Mypn Rat bisphenol A multiple interactions ISO MYPN (Homo sapiens) 6480464 [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in decreased expression of MYPN mRNA CTD PMID:28628672 Mypn Rat bisphenol A increases methylation EXP 6480464 bisphenol A results in increased methylation of MYPN gene CTD PMID:28505145 Mypn Rat bisphenol F multiple interactions ISO MYPN (Homo sapiens) 6480464 [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in decreased expression of MYPN mRNA CTD PMID:28628672 Mypn Rat cadmium atom multiple interactions ISO Mypn (Mus musculus) 6480464 [Cadmium Chloride results in increased abundance of Cadmium] which results in increased expression of MYPN mRNA CTD PMID:37325564 Mypn Rat cadmium dichloride multiple interactions ISO Mypn (Mus musculus) 6480464 [Cadmium Chloride results in increased abundance of Cadmium] which results in increased expression of MYPN mRNA CTD PMID:37325564 Mypn Rat cisplatin multiple interactions ISO MYPN (Homo sapiens) 6480464 [Cisplatin co-treated with jinfukang] results in decreased expression of MYPN mRNA CTD PMID:27392435 Mypn Rat coumarin decreases phosphorylation ISO MYPN (Homo sapiens) 6480464 coumarin results in decreased phosphorylation of MYPN protein CTD PMID:35688186 Mypn Rat crocidolite asbestos decreases expression ISO Mypn (Mus musculus) 6480464 Asbestos and Crocidolite results in decreased expression of MYPN mRNA CTD PMID:23917077 Mypn Rat dexamethasone multiple interactions ISO MYPN (Homo sapiens) 6480464 [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in decreased expression of MYPN mRNA more ... CTD PMID:28628672 Mypn Rat dimethylselenide multiple interactions ISO MYPN (Homo sapiens) 6480464 [[Reactive Oxygen Species results in increased oxidation of dimethylselenide] which results in increased expression of LINC01629 mRNA] which results in increased expression of MYPN mRNA CTD PMID:33656867 Mypn Rat doxorubicin decreases expression ISO MYPN (Homo sapiens) 6480464 Doxorubicin results in decreased expression of MYPN mRNA CTD PMID:29803840 Mypn Rat doxorubicin decreases expression EXP 6480464 Doxorubicin results in decreased expression of MYPN mRNA CTD PMID:32289291 Mypn Rat imidacloprid decreases expression EXP 6480464 imidacloprid results in decreased expression of MYPN mRNA CTD PMID:27782041 Mypn Rat indometacin multiple interactions ISO MYPN (Homo sapiens) 6480464 [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in decreased expression of MYPN mRNA more ... CTD PMID:28628672 Mypn Rat manganese atom multiple interactions ISO MYPN (Homo sapiens) 6480464 [manganese chloride results in increased abundance of Manganese] which results in increased expression of MYPN mRNA CTD PMID:39836092 Mypn Rat manganese(0) multiple interactions ISO MYPN (Homo sapiens) 6480464 [manganese chloride results in increased abundance of Manganese] which results in increased expression of MYPN mRNA CTD PMID:39836092 Mypn Rat manganese(II) chloride multiple interactions ISO MYPN (Homo sapiens) 6480464 [manganese chloride results in increased abundance of Manganese] which results in increased expression of MYPN mRNA CTD PMID:39836092 Mypn Rat methamphetamine increases expression ISO Mypn (Mus musculus) 6480464 Methamphetamine results in increased expression of MYPN mRNA CTD PMID:36914120 Mypn Rat nickel sulfate increases expression ISO MYPN (Homo sapiens) 6480464 nickel sulfate results in increased expression of MYPN mRNA CTD PMID:22714537 Mypn Rat nicotine decreases expression EXP 6480464 Nicotine results in decreased expression of MYPN mRNA CTD PMID:27782041 Mypn Rat paracetamol affects expression ISO Mypn (Mus musculus) 6480464 Acetaminophen affects the expression of MYPN mRNA CTD PMID:17562736 Mypn Rat perfluorooctanoic acid multiple interactions EXP 6480464 [Zeranol co-treated with perfluorooctanoic acid] results in decreased expression of MYPN mRNA CTD PMID:35163327 Mypn Rat pioglitazone multiple interactions ISO Mypn (Mus musculus) 6480464 [N-nitroso-tris-chloroethylurea co-treated with pioglitazone] results in decreased expression of MYPN mRNA CTD PMID:27935865 Mypn Rat potassium chromate multiple interactions ISO MYPN (Homo sapiens) 6480464 [potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of MYPN mRNA CTD PMID:22079256 Mypn Rat potassium chromate decreases expression ISO MYPN (Homo sapiens) 6480464 potassium chromate(VI) results in decreased expression of MYPN mRNA CTD PMID:22079256 Mypn Rat propanal increases expression ISO MYPN (Homo sapiens) 6480464 propionaldehyde results in increased expression of MYPN mRNA CTD PMID:26079696 Mypn Rat reactive oxygen species multiple interactions ISO MYPN (Homo sapiens) 6480464 [[Reactive Oxygen Species results in increased oxidation of dimethylselenide] which results in increased expression of LINC01629 mRNA] which results in increased expression of MYPN mRNA CTD PMID:33656867 Mypn Rat silicon dioxide increases expression ISO MYPN (Homo sapiens) 6480464 Silicon Dioxide analog results in increased expression of MYPN mRNA CTD PMID:25895662 Mypn Rat sodium arsenite increases expression ISO MYPN (Homo sapiens) 6480464 sodium arsenite results in increased expression of MYPN mRNA CTD PMID:22714537 Mypn Rat sodium arsenite increases expression ISO Mypn (Mus musculus) 6480464 sodium arsenite results in increased expression of MYPN mRNA CTD PMID:37682722 Mypn Rat sodium arsenite multiple interactions ISO MYPN (Homo sapiens) 6480464 [sodium arsenite results in increased abundance of Arsenic] which results in increased expression of MYPN mRNA CTD PMID:39836092 Mypn Rat sodium arsenite decreases expression ISO MYPN (Homo sapiens) 6480464 sodium arsenite results in decreased expression of MYPN mRNA CTD PMID:34032870 Mypn Rat sulforaphane decreases expression ISO MYPN (Homo sapiens) 6480464 sulforaphane results in decreased expression of MYPN mRNA CTD PMID:31838189 Mypn Rat sunitinib decreases expression ISO MYPN (Homo sapiens) 6480464 Sunitinib results in decreased expression of MYPN mRNA CTD PMID:31533062 Mypn Rat triclosan decreases expression ISO MYPN (Homo sapiens) 6480464 Triclosan results in decreased expression of MYPN mRNA CTD PMID:30510588 Mypn Rat triptonide increases expression ISO Mypn (Mus musculus) 6480464 triptonide results in increased expression of MYPN mRNA CTD PMID:33045310 Mypn Rat valproic acid decreases methylation ISO MYPN (Homo sapiens) 6480464 Valproic Acid results in decreased methylation of MYPN gene CTD PMID:29154799
(-)-epigallocatechin 3-gallate (ISO) (S)-nicotine (EXP) 1-naphthyl isothiocyanate (EXP) 17beta-estradiol (EXP) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 2,3,7,8-Tetrachlorodibenzofuran (EXP) 3-isobutyl-1-methyl-7H-xanthine (ISO) 4,4'-sulfonyldiphenol (ISO) 8-Br-cAMP (ISO) acetamide (EXP) alpha-Zearalanol (EXP) aristolochic acid A (ISO) aristolochic acids (EXP) arsane (ISO) arsenic atom (ISO) atrazine (EXP) benzo[a]pyrene (ISO) bisphenol A (EXP,ISO) bisphenol F (ISO) cadmium atom (ISO) cadmium dichloride (ISO) cisplatin (ISO) coumarin (ISO) crocidolite asbestos (ISO) dexamethasone (ISO) dimethylselenide (ISO) doxorubicin (EXP,ISO) imidacloprid (EXP) indometacin (ISO) manganese atom (ISO) manganese(0) (ISO) manganese(II) chloride (ISO) methamphetamine (ISO) nickel sulfate (ISO) nicotine (EXP) paracetamol (ISO) perfluorooctanoic acid (EXP) pioglitazone (ISO) potassium chromate (ISO) propanal (ISO) reactive oxygen species (ISO) silicon dioxide (ISO) sodium arsenite (ISO) sulforaphane (ISO) sunitinib (ISO) triclosan (ISO) triptonide (ISO) valproic acid (ISO)
Mypn Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 20 25,435,554 - 25,521,149 (+) NCBI GRCr8 mRatBN7.2 20 25,429,898 - 25,522,443 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 20 25,436,843 - 25,522,443 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 20 26,129,740 - 26,215,377 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 20 25,482,765 - 25,568,401 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 20 26,069,325 - 26,154,935 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 20 26,988,820 - 27,074,106 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 20 26,988,774 - 27,074,138 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 20 28,829,554 - 28,914,644 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 20 25,457,133 - 25,531,818 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 20 25,471,952 - 25,589,885 (-) NCBI Celera 20 26,744,077 - 26,818,492 (+) NCBI Celera Cytogenetic Map 20 p11 NCBI
MYPN Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 10 68,087,897 - 68,212,017 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 10 68,087,897 - 68,212,017 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 10 69,865,764 - 69,971,774 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 10 69,539,256 - 69,641,780 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 10 69,538,999 - 69,641,464 NCBI Celera 10 63,143,861 - 63,246,302 (+) NCBI Celera Cytogenetic Map 10 q21.3 NCBI HuRef 10 63,865,720 - 63,971,479 (+) NCBI HuRef CHM1_1 10 70,147,622 - 70,253,538 (+) NCBI CHM1_1 T2T-CHM13v2.0 10 68,956,458 - 69,080,820 (+) NCBI T2T-CHM13v2.0
Mypn Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 10 62,951,574 - 63,039,731 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 10 62,951,574 - 63,039,731 (-) Ensembl GRCm39 Ensembl GRCm38 10 63,115,795 - 63,203,952 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 10 63,115,795 - 63,203,952 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 10 62,578,543 - 62,666,700 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 10 62,511,137 - 62,604,287 (-) NCBI MGSCv36 mm8 Celera 10 64,215,962 - 64,304,031 (-) NCBI Celera Cytogenetic Map 10 B4 NCBI cM Map 10 32.54 NCBI
Mypn Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955425 20,471,047 - 20,544,105 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955425 20,461,654 - 20,545,626 (+) NCBI ChiLan1.0 ChiLan1.0
MYPN Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 8 80,270,078 - 80,375,293 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 10 80,275,401 - 80,380,616 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 10 64,590,232 - 64,696,512 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 10 66,916,666 - 67,006,529 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 10 66,902,008 - 67,004,967 (+) Ensembl panpan1.1 panPan2
MYPN Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 4 19,364,146 - 19,468,827 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 4 19,381,416 - 19,465,995 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 4 19,496,464 - 19,606,631 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 4 19,633,801 - 19,743,812 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 4 19,651,134 - 19,737,009 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 4 19,516,593 - 19,626,556 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 4 19,738,577 - 19,848,657 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 4 20,081,868 - 20,191,947 (+) NCBI UU_Cfam_GSD_1.0
Mypn Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024407213 61,561,178 - 61,649,670 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936521 10,050,638 - 10,142,395 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936521 10,050,638 - 10,142,395 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
MYPN Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 14 71,299,505 - 71,387,025 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 14 71,283,271 - 71,388,591 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 14 77,293,135 - 77,398,516 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
MYPN Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 9 63,173,243 - 63,279,777 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 9 63,174,804 - 63,279,133 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666048 23,941,972 - 24,047,621 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Mypn
.
Predicted Target Of
Count of predictions: 171 Count of miRNA genes: 129 Interacting mature miRNAs: 151 Transcripts: ENSRNOT00000057872 Prediction methods: Microtar, Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
4889610 Pancm3 Pancreatic morphology QTL 3 3.75 0.001 pancreas mass (VT:0010144) pancreas wet weight (CMO:0000626) 20 17617832 47606836 Rat 2303587 Bw93 Body weight QTL 93 13 body mass (VT:0001259) body weight (CMO:0000012) 20 25106722 54435887 Rat 4889870 Pur30 Proteinuria QTL 30 19 0.005 urine total protein amount (VT:0000032) urine total protein excretion rate (CMO:0000756) 20 8042410 29322208 Rat 9590109 Sffal8 Serum free fatty acids level QTL 8 5.32 0.01 blood free fatty acid amount (VT:0001553) plasma free fatty acids level (CMO:0000546) 20 1 29191651 Rat 9590275 Scort15 Serum corticosterone level QTL 15 3.48 0.001 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 20 1 29191651 Rat 2317880 Alcrsp25 Alcohol response QTL 25 2.3 response to alcohol trait (VT:0010489) duration of loss of righting reflex (CMO:0002289) 20 17697550 54435887 Rat 6893685 Bw111 Body weight QTL 111 2.7 0.004 body mass (VT:0001259) body weight (CMO:0000012) 20 1 32578807 Rat 9590092 Insglur9 Insulin/glucose ratio QTL 9 18.38 0.001 blood insulin amount (VT:0001560) calculated plasma insulin level (CMO:0002170) 20 11757515 54435887 Rat 1641915 Colcr9 Colorectal carcinoma resistance QTL 9 2.97 0.0024 intestine integrity trait (VT:0010554) benign colorectal tumor number (CMO:0001795) 20 1530655 46530655 Rat 2317057 Aia27 Adjuvant induced arthritis QTL 27 2.83 joint integrity trait (VT:0010548) right rear ankle joint diameter (CMO:0002150) 20 2892597 26381954 Rat 7387283 Uae44 Urinary albumin excretion QTL 44 0.1712 urine albumin amount (VT:0002871) urine albumin excretion rate (CMO:0000757) 20 1 26123605 Rat 7411668 Foco32 Food consumption QTL 32 8 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 20 1 36600972 Rat 2305926 Iddm37 Insulin dependent diabetes mellitus QTL 37 6 blood glucose amount (VT:0000188) plasma glucose level (CMO:0000042) 20 1527842 46527842 Rat 8694189 Bw153 Body weight QTL 153 3.13 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 20 1 29191651 Rat 2303626 Vencon10 Ventilatory control QTL 10 0.001 respiration trait (VT:0001943) respiration rate (CMO:0000289) 20 19190721 54435887 Rat 9589155 Insul32 Insulin level QTL 32 6.38 0.001 blood insulin amount (VT:0001560) plasma insulin level (CMO:0000342) 20 1 29191651 Rat 7411650 Foco23 Food consumption QTL 23 20.7 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 20 1 29191651 Rat 7411652 Foco24 Food consumption QTL 24 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 20 11757515 54435887 Rat 1331747 Hrtrt16 Heart rate QTL 16 3.163 heart pumping trait (VT:2000009) heart rate (CMO:0000002) 20 25209734 54435887 Rat 2317851 Alcrsp22 Alcohol response QTL 22 3.2 0.05 response to alcohol trait (VT:0010489) duration of loss of righting reflex (CMO:0002289) 20 1 27339237 Rat 1598816 Memor12 Memory QTL 12 2.4 exploratory behavior trait (VT:0010471) average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674) 20 2606836 47606836 Rat 2303578 Gluco50 Glucose level QTL 50 2 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 20 25106722 54435887 Rat 1641893 Alcrsp7 Alcohol response QTL 7 response to alcohol trait (VT:0010489) duration of loss of righting reflex (CMO:0002289) 20 1 27339237 Rat 9590252 Scort12 Serum corticosterone level QTL 12 20.46 0.001 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 20 1 36600972 Rat 2300188 Bmd68 Bone mineral density QTL 68 6.4 0.0001 femur mineral mass (VT:0010011) volumetric bone mineral density (CMO:0001553) 20 25106722 54435887 Rat
RH131759
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 20 25,522,111 - 25,522,303 (+) MAPPER mRatBN7.2 Rnor_6.0 20 27,073,775 - 27,073,966 NCBI Rnor6.0 Rnor_5.0 20 28,914,313 - 28,914,504 UniSTS Rnor5.0 RGSC_v3.4 20 25,457,264 - 25,457,455 UniSTS RGSC3.4 Celera 20 26,818,170 - 26,818,361 UniSTS Cytogenetic Map 20 p11 UniSTS
AI853556
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 20 25,522,327 - 25,522,413 (+) MAPPER mRatBN7.2 Rnor_6.0 20 27,073,991 - 27,074,076 NCBI Rnor6.0 Rnor_5.0 20 28,914,529 - 28,914,614 UniSTS Rnor5.0 RGSC_v3.4 20 25,457,154 - 25,457,239 UniSTS RGSC3.4 Celera 20 26,818,386 - 26,818,471 UniSTS Cytogenetic Map 20 p11 UniSTS
AU049089
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 20 25,458,907 - 25,459,042 (+) MAPPER mRatBN7.2 Rnor_6.0 20 27,010,922 - 27,011,056 NCBI Rnor6.0 Rnor_5.0 20 28,851,626 - 28,851,760 UniSTS Rnor5.0 RGSC_v3.4 20 25,520,557 - 25,520,691 UniSTS RGSC3.4 Celera 20 26,755,200 - 26,755,334 UniSTS Cytogenetic Map 20 p11 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
73
77
79
48
21
48
6
196
90
56
41
60
31
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Ensembl Acc Id:
ENSRNOT00000057872 ⟹ ENSRNOP00000054681
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 20 25,436,843 - 25,522,443 (+) Ensembl Rnor_6.0 Ensembl 20 26,999,795 - 27,074,097 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000090083 ⟹ ENSRNOP00000071299
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 20 25,436,843 - 25,522,443 (+) Ensembl Rnor_6.0 Ensembl 20 26,988,774 - 27,074,138 (+) Ensembl
RefSeq Acc Id:
NM_001368817 ⟹ NP_001355746
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 20 25,435,554 - 25,521,149 (+) NCBI mRatBN7.2 20 25,436,843 - 25,522,443 (+) NCBI
Ensembl Acc Id:
ENSRNOP00000054681 ⟸ ENSRNOT00000057872
Ensembl Acc Id:
ENSRNOP00000071299 ⟸ ENSRNOT00000090083
RefSeq Acc Id:
NP_001355746 ⟸ NM_001368817
- UniProtKB:
A0A0G2K046 (UniProtKB/TrEMBL), A6JKZ0 (UniProtKB/TrEMBL), D4A7X7 (UniProtKB/TrEMBL)
RGD ID: 13701571 Promoter ID: EPDNEW_R12092 Type: initiation region Name: Mypn_1 Description: myopalladin SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Experiment Methods: Single-end sequencing. Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 20 26,988,868 - 26,988,928 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2008-04-30
Mypn
myopalladin
Mypn_predicted
myopalladin (predicted)
'predicted' is removed
2292626 APPROVED
2005-01-12
Mypn_predicted
myopalladin (predicted)
Symbol and Name status set to approved
70820 APPROVED
