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Gene: Tp53i11 (tumor protein p53 inducible protein 11) Rattus norvegicus

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Symbol:

Tp53i11

Name:

tumor protein p53 inducible protein 11

RGD ID:

1308395

Description:

Predicted to be located in membrane. Orthologous to human TP53I11 (tumor protein p53 inducible protein 11); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acetamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC311209; p53-induced gene 11 protein; transformation related protein 53 inducible protein 11; Trp53i11; tumor protein p53-inducible protein 11

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	99,600,213 - 99,615,462 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	99,600,159 - 99,615,432 (+)	Ensembl				GRCr8
mRatBN7.2	3	79,144,824 - 79,160,056 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	79,144,895 - 79,160,050 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	82,619,038 - 82,634,268 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	91,218,092 - 91,233,322 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	89,069,716 - 89,085,205 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	82,081,838 - 82,097,064 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	82,081,906 - 82,097,056 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	88,784,239 - 88,799,481 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	77,587,546 - 77,602,708 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	78,348,213 - 78,363,366 (+)	NCBI		Celera
RGSC_v3.1	3	77,483,977 - 77,499,142 (+)	NCBI
Cytogenetic Map	3	q31	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4,4'-trichlorobiphenyl (ISO)

2-butoxyethanol (ISO)

3,3',4,4'-tetrachlorobiphenyl (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

acrylamide (ISO)

actinomycin D (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

amphetamine (EXP)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

buta-1,3-diene (ISO)

C60 fullerene (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

camptothecin (ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

chlormequat chloride (EXP)

chlorpyrifos (ISO)

choline (ISO)

cisplatin (EXP,ISO)

Cuprizon (EXP)

cycloheximide (ISO)

cytarabine (ISO)

daidzein (ISO)

daidzein 7-O-beta-D-glucoside (ISO)

diarsenic trioxide (ISO)

diazinon (ISO)

dibutyl phthalate (ISO)

dimethylselenide (ISO)

disodium selenite (ISO)

endosulfan (EXP)

epoxiconazole (ISO)

ethanol (ISO)

folic acid (ISO)

fonofos (ISO)

FR900359 (ISO)

genistein (ISO)

genistein 7-O-beta-D-glucoside (ISO)

gentamycin (EXP)

glycidyl methacrylate (ISO)

glycitein (ISO)

glycitin (ISO)

hypochlorous acid (ISO)

L-methionine (ISO)

lead(0) (ISO)

lipopolysaccharide (ISO)

methamphetamine (ISO)

nitrates (ISO)

Nutlin-3 (ISO)

okadaic acid (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

parathion (ISO)

PCB138 (ISO)

pentachlorophenol (ISO)

perfluorohexanesulfonic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

raloxifene (ISO)

reactive oxygen species (ISO)

resveratrol (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sulforaphane (ISO)

sunitinib (ISO)

tamoxifen (ISO)

terbufos (ISO)

tetrachloromethane (ISO)

titanium dioxide (ISO)

triphenyl phosphate (EXP,ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

membrane (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932

Genomics

Comparative Map Data

Tp53i11
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	99,600,213 - 99,615,462 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	99,600,159 - 99,615,432 (+)	Ensembl				GRCr8
mRatBN7.2	3	79,144,824 - 79,160,056 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	79,144,895 - 79,160,050 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	82,619,038 - 82,634,268 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	91,218,092 - 91,233,322 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	89,069,716 - 89,085,205 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	82,081,838 - 82,097,064 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	82,081,906 - 82,097,056 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	88,784,239 - 88,799,481 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	77,587,546 - 77,602,708 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	78,348,213 - 78,363,366 (+)	NCBI		Celera
RGSC_v3.1	3	77,483,977 - 77,499,142 (+)	NCBI
Cytogenetic Map	3	q31	NCBI

TP53I11
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	44,932,348 - 44,951,306 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	44,885,903 - 44,951,306 (-)	Ensembl			hg38	GRCh38
GRCh37	11	44,953,899 - 44,972,857 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	44,910,475 - 44,929,184 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	11	44,537,174 - 44,929,010	NCBI
Celera	11	45,100,594 - 45,119,410 (-)	NCBI		Celera
Cytogenetic Map	11	p11.2	NCBI
HuRef	11	44,664,565 - 44,683,405 (-)	NCBI		HuRef
CHM1_1	11	44,953,150 - 44,972,262 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	45,089,188 - 45,108,296 (-)	NCBI		T2T-CHM13v2.0

Trp53i11
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	93,017,694 - 93,032,102 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	93,017,893 - 93,032,104 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	93,187,349 - 93,201,757 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	93,187,548 - 93,201,759 (+)	Ensembl			mm10	GRCm38
MGSCv37	2	93,027,741 - 93,041,914 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	92,988,423 - 93,002,596 (+)	NCBI		MGSCv36	mm8
Celera	2	94,583,279 - 94,597,451 (+)	NCBI		Celera
Cytogenetic Map	2	E1	NCBI
cM Map	2	51.37	NCBI

Tp53i11
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	2,829,210 - 2,833,197 (+)	Ensembl
ChiLan1.0	NW_004955422	2,829,212 - 2,833,197 (+)	NCBI	ChiLan1.0	ChiLan1.0

TP53I11
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	47,144,740 - 47,163,538 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	47,151,082 - 47,169,866 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	44,890,124 - 44,908,875 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	45,384,055 - 45,401,579 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2

TP53I11
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	44,372,619 - 44,386,675 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	44,383,590 - 44,596,111 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	43,100,519 - 43,116,728 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	45,028,989 - 45,045,218 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	45,029,011 - 45,045,215 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	44,512,213 - 44,528,387 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	44,065,718 - 44,081,901 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	44,798,955 - 44,815,160 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Tp53i11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	21,715,809 - 21,730,028 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936562	3,827,448 - 3,841,601 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936562	3,826,623 - 3,841,670 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TP53I11
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	17,448,200 - 17,465,703 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	2	17,448,056 - 17,465,703 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	18,923,930 - 18,940,870 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TP53I11
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	20,395,104 - 20,414,551 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	20,409,661 - 20,413,427 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666038	117,642,571 - 117,662,889 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tp53i11
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624767	3,351,856 - 3,362,807 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624767	3,350,161 - 3,362,807 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Tp53i11
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	5	67,364,975 - 67,370,560 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Tp53i11
44 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	468
Count of miRNA genes:	226
Interacting mature miRNAs:	270
Transcripts:	ENSRNOT00000057001
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300178	Hrtrt4	Heart rate QTL 4	3.74		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	51490129	111359995	Rat
1358293	Bw38	Body weight QTL 38	6	0.0000031	body mass (VT:0001259)	body weight (CMO:0000012)	3	74364268	119364268	Rat
61377	Edpm3	Estrogen-dependent pituitary mass QTL 3	7.05	0.038	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	73592611	110333156	Rat
2301414	Kidm37	Kidney mass QTL 37		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	96509147	141509147	Rat
1582238	Bw68	Body weight QTL 68	3.2	0.0064	body mass (VT:0001259)	body weight (CMO:0000012)	3	73592512	136118980	Rat
1582239	Epfw1	Epididymal fat weight QTL 1	4.5	0.0006	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	3	73592512	136118980	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	51581665	184004958	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	67641776	167835660	Rat
1358362	Srcrt2	Stress Responsive Cort QTL 2	2.78		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	58601291	153936591	Rat
737818	Hcar12	Hepatocarcinoma resistance QTL 12	2.6		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	3	49872657	138829559	Rat
1582218	Bw74	Body weight QTL 74	3.9	0.0021	body mass (VT:0001259)	body weight (CMO:0000012)	3	73592512	136118980	Rat
1582221	Kidm30	Kidney mass QTL 30	3.5	0.0008	kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	3	85062224	136118980	Rat
1582210	Bw71	Body weight QTL 71	3.3	0.0012	body mass (VT:0001259)	body weight (CMO:0000012)	3	85062224	136118980	Rat
1300111	Rf12	Renal function QTL 12	3.78		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	3	81425008	141509147	Rat
724523	Tsu1	Thymus enlargement suppressive QTL 1	3.84		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	3	70845569	136091483	Rat
1600376	Arunc5	Aerobic running capacity QTL 5		0.21	exercise endurance trait (VT:0002332)	longest distance run on treadmill (CMO:0001406)	3	93829559	138829559	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	79649560	177741895	Rat
1581503	Cm58	Cardiac mass QTL 58	2.7	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	96509147	141509147	Rat
2292613	Ept16	Estrogen-induced pituitary tumorigenesis QTL 16	8.3		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	67641995	130815812	Rat
738019	Anxrr10	Anxiety related response QTL 10	3.9		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	3	58925062	103925062	Rat
631841	Niddm39	Non-insulin dependent diabetes mellitus QTL 39	3.36		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	70311536	115311536	Rat
631200	Cm25	Cardiac mass QTL 25	4.8	0.0001	heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	3	81541464	126563126	Rat
12879848	Bw181	Body weght QTL 181		0.015	body mass (VT:0001259)	body weight (CMO:0000012)	3	90755164	141509147	Rat
1358905	Hrtrt17	Heart rate QTL 17	5.9	0.000014	heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	36721849	110333156	Rat
1354597	Kidm13	Kidney mass QTL 13	2.9		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	3	42158111	124558371	Rat
1358885	Bp251	Blood pressure QTL 251	3.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	1	141509147	Rat
1581546	Pur13	Proteinuria QTL 13	2.93	0.0335	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	3	98651826	167012663	Rat
1354604	Bw36	Body weight QTL 36	2.9		body mass (VT:0001259)	body weight (CMO:0000012)	3	42158111	124558371	Rat
1358888	Bp264	Blood pressure QTL 264	4.43		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	5675975	141509147	Rat
1358186	Ept2	Estrogen-induced pituitary tumorigenesis QTL 2	8.3		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	67641995	130815812	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	160	91	90	59	92	59	6	356	192	11	139	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107749	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001399493	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001399494	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006234569	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006234571	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283675	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC167758	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000057001 ⟹ ENSRNOP00000053834

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	99,600,159 - 99,615,432 (+)	Ensembl
mRatBN7.2 Ensembl	3	79,144,895 - 79,160,048 (+)	Ensembl
Rnor_6.0 Ensembl	3	82,081,906 - 82,097,056 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000116468 ⟹ ENSRNOP00000082187

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	79,154,504 - 79,160,050 (+)	Ensembl

RefSeq Acc Id:

NM_001107749 ⟹ NP_001101219

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	99,600,300 - 99,615,462 (+)	NCBI
mRatBN7.2	3	79,144,892 - 79,160,056 (+)	NCBI
Rnor_6.0	3	82,081,897 - 82,097,058 (+)	NCBI
Rnor_5.0	3	88,784,239 - 88,799,481 (+)	NCBI
RGSC_v3.4	3	77,587,546 - 77,602,708 (+)	RGD
Celera	3	78,348,213 - 78,363,366 (+)	RGD

Sequence:

show sequence

GCCGCCAGACTCGGGCGAGCCCGGCAGCGACTTGAGTCCAGCTTGCCCTGCCCTGCCCTGCCCT
GCTTGCCCAGCGCGGCGCCGCGATGTGAGACTCCCCGGGCCGGAGCGTCCGCTGGGCACGCCAG
CACCGCGAGCGCAGCACCCCGTTGTGAGGACTGAACACAGGAGAGGAACGCTCACCTCAGATTC
CAGAGCCCATCTCAGCATCTGCTAACTGCCTGTTTCACAGAAGAAAAAATGGCAGCCAAACAGC
CTCCTCCGCTCATGAAGAAGCACAGCCAGACAGATCTTGTGAGCCGCCTGAAGACCAGAAAGAT
CCTGGGCGTGGGCGGGGAGGATGATGATGGGGAAGTGCACCGGTCAAAGATCAGCCAGGTTTTG
GGCAACGAGATAAAGTTTGCCGTGCGGGAGCCTCTGGGGCTCAGGGTCTGGCAGTTTCTCTCTG
CTATGCTGTTCTCCAGTGTGGCCATCATGGCCCTTGCCCTCCCTGACCAGCTCTACGATGCAGT
TTTTGATGGGGCTGAGGTCACGAGCAAGACCCCCATCCGCCTCTATGGTGGCGCCCTTCTTAGC
ATCTCCCTGATCATGTGGAATGCACTCTACACAGCCGAGAAGGTCATCATCCGCTGGACTCTGC
TCACTGAGGCCTGCTACTTCGGGGTGCAGTCCTTGGTGGTCACTGCCACACTTGCTGAGACGGG
CCTCATGTCCCTGGGGACCCTGCTGCTCCTGGCCAGCCGCCTCCTCTTTGTTATTGTCAGCATC
TACTACTATTACCAAGTCGGCCGGAAACCCAAGAAAGTGTAGCGGGCTGGGACCTGCCTGGGCC
TGGACCTGGGCCAGAGCAGCTGGGGACTTCACTGACCATGGGTCCCAGGCAGGCCCGCAGGCAG
GCAGGGTGTACGCACTTCCTTCCCTCCCAGGCACTCCCTGGAATCAGCTTGGATCTCCTGGGAT
TCTAGGAGTGACCAGTCAGGCTGCGGCCTCTGCATCCCACCCCTCACCCCCGTACAGGGACAAC
TCCTGGCCCTGTCTTTCTTGGCCTCTAGACTCTAACGGGCACAGTCTAGAGTGAGTTTTGGGGT
CTGGGCTGAGTCAAGGTTAGTTCCTCTGCCAGGAAATCCTTTCTAGGAGGTTGTATCAGCCCCA
GAAGCAGCTCTCAGCCTCTCCCCATCCAGAAACCGGATGTGTGAGTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCACACACACACACACACAGTAATTCTAGAGTCCCAACTGAGGTCAT
CTAGCCAAGGGGATTGACTGCCTCCCTTGAGCCAAGTTCCCCACCCCCCGTCCTGAACATCTGA
CCCTCTCTTTGGCCTGCTGTAGGTTGTTCTGATTCTCCGGCTGGCTGGCTGGCTGCCTGCCTGC
ACCCCAGAGCCCCAGTCCCTTCCCAACATGCCAGGGTTAGCTAATATACCACAGGCCTGACAGT
TCCTGGCCCCTGCCTGTCCATAGGCTCCTAGTGCATGAGGAATTCTGAGGAGAAGCAAAGTGAG
GGCATTTCTTTGGCATGGTCTCCAAGGCCTGCATGGCTACACCTGGCTCGGTGCCCCCTCCAGA
GGCTGCCCTAAGGCTTACGGGGTAAAGCCTACAGCCCCTCAAATCCTACAATGGAAAGAGACAG
GAGTGGATCTGCCATCCCTCCACATCCCAAGAGTGGGCCTCTAGAGCTGAAGATACGTCCCCGG
TGCCACCAGCCTGTGTGGCCCCTCCCCTTAGTCCTAGCTCCCAGTGCCTTCCCACCCTTCAGCA
GCAAGCACACTAAGAGATTTGGCCCGAGGCCTCTCCCTTCTGCAAGGGGGTGGTCCTCTATGCC
TGAGGAACCTTTCTCTAGGGCACCTGGGCTCACAGCCTCCCAGGGCTCAGTTGTTCCTGCTGCC
AAGTGCCCCATGACAATGGCCTGTGCCTAGTGGAGGGGACTCAGGGAAGTTTCAGTGGAAGACA
TGCTCAGCAGTGTCCTAGGCTGCTTCTGTAACCAAGGTCTGGCAGAGTGGCGAGCCCCTGCGCG
TTCAGGAAGGGCCCATTATGTATATCTGCCTCCTGTCACTGGCTTTGCGCCAGTCCCTCAGTTC
CCAACTCTTGACTCAGAGCACAGGTCCAGCCACTGCCAGCTCTTAGTACAGTGGCAGCTGCTGT
AGAGCGGGTGACATTGGTTGACTGTTCTCAGAGGATTTATCCTCTTGAATCCTCTACGAATGCA
GATATAGTCCCAAGAGAGAGAGTCGTAGGAATTGAAGATGCCAGCCATACACAGCCTGCAGGGA
CATCTGCCAGGCTTCCCCTCAGCACGAGGAGGTGGCAGGGCCTGCCTGGGAGTGGTGACCAGAT
CTCCATGGTTAAACTGCAGTGATACTTTTAGGTGGGGTGGGCTCAAGACCAGACTGAGGCTGGC
ATACAGACACCTGTGGCCTCCGGGACACACTAAGCTTGGAAGGAGGCAGCAATGGAGACAGGAG
CCCCACCCTGGCTCTGAGCTCAGGGTGCCCTGACTGCCCCCCGTCACAGCTCCTCTTGTGCTTC
TGCCTGGCCCCCAAGACTGCCTCTGTCATGGTCACTATTTATTCCTTGTTCCCTTTTCTTTTTG
TAAGAAACAGTCACAGAAAAAAAAAAAACAAAACAATGAG

hide sequence

RefSeq Acc Id:

NM_001399493 ⟹ NP_001386422

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	99,600,300 - 99,615,462 (+)	NCBI
mRatBN7.2	3	79,144,892 - 79,160,056 (+)	NCBI

RefSeq Acc Id:

NM_001399494 ⟹ NP_001386423

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	99,600,300 - 99,615,462 (+)	NCBI
mRatBN7.2	3	79,144,892 - 79,160,056 (+)	NCBI

RefSeq Acc Id:

XM_006234569 ⟹ XP_006234631

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	99,600,214 - 99,615,462 (+)	NCBI
mRatBN7.2	3	79,144,824 - 79,160,056 (+)	NCBI
Rnor_6.0	3	82,081,839 - 82,097,064 (+)	NCBI
Rnor_5.0	3	88,784,239 - 88,799,481 (+)	NCBI

Sequence:

show sequence

TGGGAGGGGACGGCGCGCCATTGGCTTGTGCGTGGCACTAGAGGAGGGACCAGTGCGGGCCGCC
AGACTCGGGCGAGCCCGGCAGCGACTTGAGTCCAGCTTGCCCTGCCCTGCCCTGCCCTGCTTGC
CCAGCGCGGCGCCGCGATGTGAGACTCCCCGGGCCGGAGCGTCCGCTGGGCACGCCAGCACCGC
GAGCGCAGCACCCCGTTGTGAGGACTGAACACAGGAGAGGAACGCTCACCTCAGATTCCAGAGC
CCATCTCAGCATCTGCTAACTGCCTGTTTCAAGACCAGGCTGGAAGCATCCTCCTCAACCCATT
TTACAGGAGAGGAAACTGAGGCAGCCGCAACACCATCTCCTCTTAGGCCCTGAGTAGGGCCTGG
CCACATCCTTCTCACCCTACATTGGGACCTGGGGTCTGGAAGTCCAGCAAGAACAATGGCTGAG
GCCAGTGTCTCCCCATGTCCCTCAGCAGAAGAAAAAATGGCAGCCAAACAGCCTCCTCCGCTCA
TGAAGAAGCACAGCCAGACAGATCTTGTGAGCCGCCTGAAGACCAGAAAGATCCTGGGCGTGGG
CGGGGAGGATGATGATGGGGAAGTGCACCGGTCAAAGATCAGCCAGGTTTTGGGCAACGAGATA
AAGTTTGCCGTGCGGGAGCCTCTGGGGCTCAGGGTCTGGCAGTTTCTCTCTGCTATGCTGTTCT
CCAGTGTGGCCATCATGGCCCTTGCCCTCCCTGACCAGCTCTACGATGCAGTTTTTGATGGGGC
TGAGGTCACGAGCAAGACCCCCATCCGCCTCTATGGTGGCGCCCTTCTTAGCATCTCCCTGATC
ATGTGGAATGCACTCTACACAGCCGAGAAGGTCATCATCCGCTGGACTCTGCTCACTGAGGCCT
GCTACTTCGGGGTGCAGTCCTTGGTGGTCACTGCCACACTTGCTGAGACGGGCCTCATGTCCCT
GGGGACCCTGCTGCTCCTGGCCAGCCGCCTCCTCTTTGTTATTGTCAGCATCTACTACTATTAC
CAAGTCGGCCGGAAACCCAAGAAAGTGTAGCGGGCTGGGACCTGCCTGGGCCTGGACCTGGGCC
AGAGCAGCTGGGGACTTCACTGACCATGGGTCCCAGGCAGGCCCGCAGGCAGGCAGGGTGTACG
CACTTCCTTCCCTCCCAGGCACTCCCTGGAATCAGCTTGGATCTCCTGGGATTCTAGGAGTGAC
CAGTCAGGCTGCGGCCTCTGCATCCCACCCCTCACCCCCGTACAGGGACAACTCCTGGCCCTGT
CTTTCTTGGCCTCTAGACTCTAACGGGCACAGTCTAGAGTGAGTTTTGGGGTCTGGGCTGAGTC
AAGGTTAGTTCCTCTGCCAGGAAATCCTTTCTAGGAGGTTGTATCAGCCCCAGAAGCAGCTCTC
AGCCTCTCCCCATCCAGAAACCGGATGTGTGAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCACACACACACACACACAGTAATTCTAGAGTCCCAACTGAGGTCATCTAGCCAAGGGGAT
TGACTGCCTCCCTTGAGCCAAGTTCCCCACCCCCCGTCCTGAACATCTGACCCTCTCTTTGGCC
TGCTGTAGGTTGTTCTGATTCTCCGGCTGGCTGGCTGGCTGCCTGCCTGCACCCCAGAGCCCCA
GTCCCTTCCCAACATGCCAGGGTTAGCTAATATACCACAGGCCTGACAGTTCCTGGCCCCTGCC
TGTCCATAGGCTCCTAGTGCATGAGGAATTCTGAGGAGAAGCAAAGTGAGGGCATTTCTTTGGC
ATGGTCTCCAAGGCCTGCATGGCTACACCTGGCTCGGTGCCCCCTCCAGAGGCTGCCCTAAGGC
TTACGGGGTAAAGCCTACAGCCCCTCAAATCCTACAATGGAAAGAGACAGGAGTGGATCTGCCA
TCCCTCCACATCCCAAGAGTGGGCCTCTAGAGCTGAAGATACGTCCCCGGTGCCACCAGCCTGT
GTGGCCCCTCCCCTTAGTCCTAGCTCCCAGTGCCTTCCCACCCTTCAGCAGCAAGCACACTAAG
AGATTTGGCCCGAGGCCTCTCCCTTCTGCAAGGGGGTGGTCCTCTATGCCTGAGGAACCTTTCT
CTAGGGCACCTGGGCTCACAGCCTCCCAGGGCTCAGTTGTTCCTGCTGCCAAGTGCCCCATGAC
AATGGCCTGTGCCTAGTGGAGGGGACTCAGGGAAGTTTCAGTGGAAGACATGCTCAGCAGTGTC
CTAGGCTGCTTCTGTAACCAAGGTCTGGCAGAGTGGCGAGCCCCTGCGCGTTCAGGAAGGGCCC
ATTATGTATATCTGCCTCCTGTCACTGGCTTTGCGCCAGTCCCTCAGTTCCCAACTCTTGACTC
AGAGCACAGGTCCAGCCACTGCCAGCTCTTAGTACAGTGGCAGCTGCTGTAGAGCGGGTGACAT
TGGTTGACTGTTCTCAGAGGATTTATCCTCTTGAATCCTCTACGAATGCAGATATAGTCCCAAG
AGAGAGAGTCGTAGGAATTGAAGATGCCAGCCATACACAGCCTGCAGGGACATCTGCCAGGCTT
CCCCTCAGCACGAGGAGGTGGCAGGGCCTGCCTGGGAGTGGTGACCAGATCTCCATGGTTAAAC
TGCAGTGATACTTTTAGGTGGGGTGGGCTCAAGACCAGACTGAGGCTGGCATACAGACACCTGT
GGCCTCCGGGACACACTAAGCTTGGAAGGAGGCAGCAATGGAGACAGGAGCCCCACCCTGGCTC
TGAGCTCAGGGTGCCCTGACTGCCCCCCGTCACAGCTCCTCTTGTGCTTCTGCCTGGCCCCCAA
GACTGCCTCTGTCATGGTCACTATTTATTCCTTGTTCCCTTTTCTTTTTGTAAGAAACAGTCAC
AGAAAAAAAAAAAACAAAACAATGAGAAACGA

hide sequence

RefSeq Acc Id:

XM_006234571 ⟹ XP_006234633

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	99,600,213 - 99,615,462 (+)	NCBI
mRatBN7.2	3	79,144,824 - 79,160,056 (+)	NCBI
Rnor_6.0	3	82,091,495 - 82,097,064 (+)	NCBI
Rnor_5.0	3	88,784,239 - 88,799,481 (+)	NCBI

Sequence:

show sequence

GCCTGTTTCAGTACGTGCCCAGGACTGGCCTGTGGAATTGCTAGGGGTGGCATGTTTCGGGGCT
GTGGAACATGGTGGGCGGAGCAGAAGAAAAAATGGCAGCCAAACAGCCTCCTCCGCTCATGAAG
AAGCACAGCCAGACAGATCTTGTGAGCCGCCTGAAGACCAGAAAGATCCTGGGCGTGGGCGGGG
AGGATGATGATGGGGAAGTGCACCGGTCAAAGATCAGCCAGGTTTTGGGCAACGAGATAAAGTT
TGCCGTGCGGGAGCCTCTGGGGCTCAGGGTCTGGCAGTTTCTCTCTGCTATGCTGTTCTCCAGT
GTGGCCATCATGGCCCTTGCCCTCCCTGACCAGCTCTACGATGCAGTTTTTGATGGGGCTGAGG
TCACGAGCAAGACCCCCATCCGCCTCTATGGTGGCGCCCTTCTTAGCATCTCCCTGATCATGTG
GAATGCACTCTACACAGCCGAGAAGGTCATCATCCGCTGGACTCTGCTCACTGAGGCCTGCTAC
TTCGGGGTGCAGTCCTTGGTGGTCACTGCCACACTTGCTGAGACGGGCCTCATGTCCCTGGGGA
CCCTGCTGCTCCTGGCCAGCCGCCTCCTCTTTGTTATTGTCAGCATCTACTACTATTACCAAGT
CGGCCGGAAACCCAAGAAAGTGTAGCGGGCTGGGACCTGCCTGGGCCTGGACCTGGGCCAGAGC
AGCTGGGGACTTCACTGACCATGGGTCCCAGGCAGGCCCGCAGGCAGGCAGGGTGTACGCACTT
CCTTCCCTCCCAGGCACTCCCTGGAATCAGCTTGGATCTCCTGGGATTCTAGGAGTGACCAGTC
AGGCTGCGGCCTCTGCATCCCACCCCTCACCCCCGTACAGGGACAACTCCTGGCCCTGTCTTTC
TTGGCCTCTAGACTCTAACGGGCACAGTCTAGAGTGAGTTTTGGGGTCTGGGCTGAGTCAAGGT
TAGTTCCTCTGCCAGGAAATCCTTTCTAGGAGGTTGTATCAGCCCCAGAAGCAGCTCTCAGCCT
CTCCCCATCCAGAAACCGGATGTGTGAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
ACACACACACACACACAGTAATTCTAGAGTCCCAACTGAGGTCATCTAGCCAAGGGGATTGACT
GCCTCCCTTGAGCCAAGTTCCCCACCCCCCGTCCTGAACATCTGACCCTCTCTTTGGCCTGCTG
TAGGTTGTTCTGATTCTCCGGCTGGCTGGCTGGCTGCCTGCCTGCACCCCAGAGCCCCAGTCCC
TTCCCAACATGCCAGGGTTAGCTAATATACCACAGGCCTGACAGTTCCTGGCCCCTGCCTGTCC
ATAGGCTCCTAGTGCATGAGGAATTCTGAGGAGAAGCAAAGTGAGGGCATTTCTTTGGCATGGT
CTCCAAGGCCTGCATGGCTACACCTGGCTCGGTGCCCCCTCCAGAGGCTGCCCTAAGGCTTACG
GGGTAAAGCCTACAGCCCCTCAAATCCTACAATGGAAAGAGACAGGAGTGGATCTGCCATCCCT
CCACATCCCAAGAGTGGGCCTCTAGAGCTGAAGATACGTCCCCGGTGCCACCAGCCTGTGTGGC
CCCTCCCCTTAGTCCTAGCTCCCAGTGCCTTCCCACCCTTCAGCAGCAAGCACACTAAGAGATT
TGGCCCGAGGCCTCTCCCTTCTGCAAGGGGGTGGTCCTCTATGCCTGAGGAACCTTTCTCTAGG
GCACCTGGGCTCACAGCCTCCCAGGGCTCAGTTGTTCCTGCTGCCAAGTGCCCCATGACAATGG
CCTGTGCCTAGTGGAGGGGACTCAGGGAAGTTTCAGTGGAAGACATGCTCAGCAGTGTCCTAGG
CTGCTTCTGTAACCAAGGTCTGGCAGAGTGGCGAGCCCCTGCGCGTTCAGGAAGGGCCCATTAT
GTATATCTGCCTCCTGTCACTGGCTTTGCGCCAGTCCCTCAGTTCCCAACTCTTGACTCAGAGC
ACAGGTCCAGCCACTGCCAGCTCTTAGTACAGTGGCAGCTGCTGTAGAGCGGGTGACATTGGTT
GACTGTTCTCAGAGGATTTATCCTCTTGAATCCTCTACGAATGCAGATATAGTCCCAAGAGAGA
GAGTCGTAGGAATTGAAGATGCCAGCCATACACAGCCTGCAGGGACATCTGCCAGGCTTCCCCT
CAGCACGAGGAGGTGGCAGGGCCTGCCTGGGAGTGGTGACCAGATCTCCATGGTTAAACTGCAG
TGATACTTTTAGGTGGGGTGGGCTCAAGACCAGACTGAGGCTGGCATACAGACACCTGTGGCCT
CCGGGACACACTAAGCTTGGAAGGAGGCAGCAATGGAGACAGGAGCCCCACCCTGGCTCTGAGC
TCAGGGTGCCCTGACTGCCCCCCGTCACAGCTCCTCTTGTGCTTCTGCCTGGCCCCCAAGACTG
CCTCTGTCATGGTCACTATTTATTCCTTGTTCCCTTTTCTTTTTGTAAGAAACAGTCACAGAAA
AAAAAAAAACAAAACAATGAGAAACGA

hide sequence

RefSeq Acc Id:

XM_063283675 ⟹ XP_063139745

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	99,600,214 - 99,615,462 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101219	(Get FASTA)	NCBI Sequence Viewer
	NP_001386422	(Get FASTA)	NCBI Sequence Viewer
	NP_001386423	(Get FASTA)	NCBI Sequence Viewer
	XP_006234631	(Get FASTA)	NCBI Sequence Viewer
	XP_006234633	(Get FASTA)	NCBI Sequence Viewer
	XP_063139745	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI67758	(Get FASTA)	NCBI Sequence Viewer
	B3DMA0	(Get FASTA)	NCBI Sequence Viewer
	EDL79585	(Get FASTA)	NCBI Sequence Viewer
	EDL79586	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000053834

RefSeq Acc Id:	NP_001101219 ⟸ NM_001107749
- UniProtKB:	B3DMA0 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MAAKQPPPLMKKHSQTDLVSRLKTRKILGVGGEDDDGEVHRSKISQVLGNEIKFAVREPLGLRV WQFLSAMLFSSVAIMALALPDQLYDAVFDGAEVTSKTPIRLYGGALLSISLIMWNALYTAEKVI IRWTLLTEACYFGVQSLVVTATLAETGLMSLGTLLLLASRLLFVIVSIYYYYQVGRKPKKV hide sequence

RefSeq Acc Id:	XP_006234631 ⟸ XM_006234569
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2QSJ1 (UniProtKB/TrEMBL), A6HNI4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEASVSPCPSAEEKMAAKQPPPLMKKHSQTDLVSRLKTRKILGVGGEDDDGEVHRSKISQVLG NEIKFAVREPLGLRVWQFLSAMLFSSVAIMALALPDQLYDAVFDGAEVTSKTPIRLYGGALLSI SLIMWNALYTAEKVIIRWTLLTEACYFGVQSLVVTATLAETGLMSLGTLLLLASRLLFVIVSIY YYYQVGRKPKKV hide sequence

RefSeq Acc Id:	XP_006234633 ⟸ XM_006234571
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5ZW55 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVGGAEEKMAAKQPPPLMKKHSQTDLVSRLKTRKILGVGGEDDDGEVHRSKISQVLGNEIKFAV REPLGLRVWQFLSAMLFSSVAIMALALPDQLYDAVFDGAEVTSKTPIRLYGGALLSISLIMWNA LYTAEKVIIRWTLLTEACYFGVQSLVVTATLAETGLMSLGTLLLLASRLLFVIVSIYYYYQVGR KPKKV hide sequence

Ensembl Acc Id:

ENSRNOP00000053834 ⟸ ENSRNOT00000057001

Ensembl Acc Id:

ENSRNOP00000082187 ⟸ ENSRNOT00000116468

RefSeq Acc Id:	NP_001386422 ⟸ NM_001399493
- UniProtKB:	B3DMA0 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	NP_001386423 ⟸ NM_001399494
- UniProtKB:	B3DMA0 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063139745 ⟸ XM_063283675
- Peptide Label:	isoform X3

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B3DMA0-F1-model_v2	AlphaFold	B3DMA0	1-189	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13692229

Promoter ID:

EPDNEW_R2754

Type:

initiation region

Name:

Tp53i11_1

Description:

tumor protein p53 inducible protein 11

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	3	82,081,930 - 82,081,990	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308395	AgrOrtholog
BioCyc Gene	G2FUF-48672	BioCyc
Ensembl Genes	ENSRNOG00000008738	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000057001	ENTREZGENE
IMAGE_CLONE	IMAGE:7123311	IMAGE-MGC_LOAD
InterPro	TP53I11	UniProtKB/Swiss-Prot
KEGG Report	rno:311209	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:187439	IMAGE-MGC_LOAD
NCBI Gene	311209	ENTREZGENE
PANTHER	PTHR31584	UniProtKB/Swiss-Prot
	TUMOR PROTEIN P53-INDUCIBLE PROTEIN 11	UniProtKB/Swiss-Prot
Pfam	p53-inducible11	UniProtKB/Swiss-Prot
PhenoGen	Tp53i11	PhenoGen
RatGTEx	ENSRNOG00000008738	RatGTEx
UniProt	A0A8I5ZW55	ENTREZGENE
	A0A8L2QSJ1	ENTREZGENE, UniProtKB/TrEMBL
	A6HNI4	ENTREZGENE, UniProtKB/TrEMBL
	B3DMA0	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-10-23	Tp53i11	tumor protein p53 inducible protein 11	Trp53i11	transformation related protein 53 inducible protein 11	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-04	Trp53i11	transformation related protein 53 inducible protein 11	Tp53i11_predicted	tumor protein p53 inducible protein 11 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-12	Tp53i11_predicted	tumor protein p53 inducible protein 11 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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