Ctrc (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 5 | 159,430,333 - 159,439,557 (-) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 5 | 159,430,335 - 159,439,545 (-) | Ensembl | | | | GRCr8 | mRatBN7.2 | 5 | 154,147,314 - 154,156,540 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 154,147,316 - 154,156,528 (-) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 5 | 156,832,248 - 156,841,319 (-) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 158,605,546 - 158,614,617 (-) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 158,594,698 - 158,603,769 (-) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 160,394,677 - 160,403,373 (-) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 160,394,580 - 160,405,050 (-) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 164,106,200 - 164,115,282 (-) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 5 | 160,742,491 - 160,755,332 (-) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 5 | 152,500,014 - 152,508,395 (-) | NCBI | | Celera | | | RGSC_v3.1 | 5 | 160,748,258 - 160,765,508 (-) | NCBI | | | | | Cytogenetic Map | 5 | q36 | NCBI | | | | |
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CTRC (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 1 | 15,438,443 - 15,449,242 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 15,438,442 - 15,449,242 (+) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 1 | 15,764,939 - 15,775,737 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 15,637,525 - 15,645,740 (+) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 15,510,266 - 15,518,459 | NCBI | | | | | Celera | 1 | 14,247,812 - 14,256,036 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | p36.21 | NCBI | | | | | HuRef | 1 | 14,284,975 - 14,292,965 (+) | NCBI | | HuRef | | | CHM1_1 | 1 | 15,563,607 - 15,571,831 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 14,883,158 - 14,893,965 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Ctrc (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 4 | 141,565,550 - 141,573,598 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 141,565,550 - 141,573,670 (-) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 4 | 141,838,239 - 141,846,287 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 141,814,962 - 141,846,359 (-) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 4 | 141,394,154 - 141,402,274 (-) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 141,110,315 - 141,118,433 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 143,663,843 - 143,672,528 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | D3 | NCBI | | | | | cM Map | 4 | 74.75 | NCBI | | | | |
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Ctrc (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955527 | 2,714,210 - 2,719,598 (-) | Ensembl | | | | | ChiLan1.0 | NW_004955527 | 2,714,001 - 2,719,598 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CTRC (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 1 | 211,473,375 - 211,482,329 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 210,721,838 - 210,730,788 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 14,576,496 - 14,588,143 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 15,571,771 - 15,580,000 (+) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 15,571,771 - 15,580,000 (+) | Ensembl | | | panPan2 | panpan1.1 |
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LOC478220 (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 2 | 82,075,135 - 82,081,091 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 2 | 78,612,480 - 78,618,473 (-) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 2 | 82,724,375 - 82,730,364 (-) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 2 | 79,477,146 - 79,483,132 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 2 | 80,495,080 - 80,501,075 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 2 | 81,559,591 - 81,565,591 (-) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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LOC101967812 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024405058 | 37,312,058 - 37,338,599 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936474 | 3,132,238 - 3,135,919 (+) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936474 | 3,128,053 - 3,163,381 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
CTRC (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 6 | 74,674,836 - 74,681,309 (+) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 74,674,836 - 74,681,311 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 69,055,983 - 69,062,605 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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LOC103225977 (Chlorocebus sabaeus - green monkey) |
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Ctrc (Heterocephalus glaber - naked mole-rat) |
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Ctrc (Rattus rattus - black rat) |
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