Advanced Search (OLGA)

Gene: Tnpo1 (transportin 1) Rattus norvegicus

Analyze

Symbol:

Tnpo1

Name:

transportin 1

RGD ID:

1308372

Description:

Predicted to enable nuclear import signal receptor activity and nuclear localization sequence binding activity. Predicted to be involved in protein import into nucleus. Predicted to be located in nuclear lumen. Predicted to be active in cytoplasm and nucleus. Orthologous to human TNPO1 (transportin 1); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC309126; transportin-1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TNPO1 (transportin 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Tnpo1 (transportin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tnpo1 (transportin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TNPO1 (transportin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TNPO1 (transportin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tnpo1 (transportin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TNPO1 (transportin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TNPO1 (transportin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tnpo1 (transportin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Tnpo1 (transportin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	TNPO1 (transportin 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Tnpo1 (transportin 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	tnpo1 (transportin 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	KAP104	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG8219	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	Tnpo	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	imb-2	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	tnpo1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	tnpo1	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	31,941,731 - 32,034,366 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	31,941,731 - 32,034,326 (-)	Ensembl				GRCr8
mRatBN7.2	2	30,207,529 - 30,300,162 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	30,211,510 - 30,300,375 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	2	37,268,846 - 37,361,422 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	35,363,201 - 35,455,776 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	30,175,882 - 30,268,487 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	29,056,219 - 29,126,882 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	29,056,219 - 29,121,104 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	2	48,238,550 - 48,308,427 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	29,482,093 - 29,539,145 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	26,240,332 - 26,302,645 (-)	NCBI		Celera
RGSC_v3.1	2	29,401,327 - 29,490,924 (-)	NCBI
Cytogenetic Map	2	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

1-nitropyrene (ISO)

17alpha-ethynylestradiol (EXP)

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2,6-dinitrotoluene (EXP)

2-methylcholine (ISO)

4,4'-sulfonyldiphenol (ISO)

acrolein (ISO)

afimoxifene (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

bisphenol AF (ISO)

Bisphenol B (ISO)

bisphenol F (ISO)

butanal (ISO)

cadmium atom (ISO)

cadmium dichloride (EXP)

cadmium sulfate (ISO)

calcitriol (ISO)

carbon nanotube (ISO)

casticin (ISO)

chlorpyrifos (ISO)

cobalt dichloride (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

dicrotophos (ISO)

dorsomorphin (ISO)

elemental selenium (ISO)

entinostat (ISO)

enzyme inhibitor (ISO)

flutamide (EXP)

folic acid (ISO)

fulvestrant (ISO)

hydrogen peroxide (ISO)

ionomycin (ISO)

isoprenaline (ISO)

ivermectin (ISO)

ketamine (EXP)

lipopolysaccharide (ISO)

manumycin A (ISO)

methamphetamine (EXP)

Methylazoxymethanol acetate (EXP)

methylmercury chloride (ISO)

microcystin-LR (ISO)

mono(2-ethylhexyl) phthalate (ISO)

N-acetyl-L-cysteine (ISO)

okadaic acid (ISO)

oxaliplatin (EXP)

ozone (ISO)

paracetamol (ISO)

PCB138 (EXP)

pentachlorophenol (ISO)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

raloxifene (ISO)

resveratrol (ISO)

SB 431542 (ISO)

selenium atom (ISO)

sodium arsenite (EXP,ISO)

Soman (EXP)

sunitinib (ISO)

tamibarotene (ISO)

tert-butyl hydroperoxide (ISO)

testosterone enanthate (ISO)

thioacetamide (EXP)

thiram (ISO)

titanium dioxide (ISO)

topotecan (EXP)

trimellitic anhydride (ISO)

triphenyl phosphate (EXP,ISO)

Triptolide (ISO)

troglitazone (ISO)

uranium atom (ISO)

urethane (ISO)

valdecoxib (EXP)

valproic acid (EXP,ISO)

vinclozolin (EXP)

vitamin E (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

intracellular protein transport (IEA)

protein import into nucleus (IBA,IEA,ISO)

protein transport (IEA)

Cellular Component

cytoplasm (IBA,IEA)

cytosol (IEA,ISO)

nuclear lumen (IEA)

nucleolus (IEA,ISO)

nucleoplasm (IEA,ISO)

nucleus (IBA,IEA)

Molecular Function

nuclear import signal receptor activity (IBA)

nuclear localization sequence binding (IBA)

protein binding (ISO)

small GTPase binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:9144189	PMID:12477932	PMID:18570454	PMID:22442722	PMID:22658674	PMID:22681889	PMID:25002582

Genomics

Comparative Map Data

Tnpo1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	31,941,731 - 32,034,366 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	31,941,731 - 32,034,326 (-)	Ensembl				GRCr8
mRatBN7.2	2	30,207,529 - 30,300,162 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	30,211,510 - 30,300,375 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	2	37,268,846 - 37,361,422 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	35,363,201 - 35,455,776 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	30,175,882 - 30,268,487 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	29,056,219 - 29,126,882 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	29,056,219 - 29,121,104 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	2	48,238,550 - 48,308,427 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	29,482,093 - 29,539,145 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	26,240,332 - 26,302,645 (-)	NCBI		Celera
RGSC_v3.1	2	29,401,327 - 29,490,924 (-)	NCBI
Cytogenetic Map	2	q12	NCBI

TNPO1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	72,816,661 - 72,914,388 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	72,816,312 - 72,916,741 (+)	Ensembl			hg38	GRCh38
GRCh37	5	72,112,488 - 72,210,215 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	72,148,174 - 72,245,971 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	5	68,007,813 - 68,105,601 (+)	NCBI		Celera
Cytogenetic Map	5	q13.2	NCBI
HuRef	5	67,317,777 - 67,415,712 (+)	NCBI		HuRef
CHM1_1	5	71,545,168 - 71,642,989 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	73,297,810 - 73,395,474 (+)	NCBI		T2T-CHM13v2.0

Tnpo1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	98,975,527 - 99,062,851 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	98,975,527 - 99,062,892 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	13	98,839,019 - 98,926,384 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	98,839,019 - 98,926,384 (-)	Ensembl			mm10	GRCm38
MGSCv37	13	99,612,036 - 99,696,339 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	13	99,942,895 - 100,026,500 (-)	NCBI		MGSCv36	mm8
Celera	13	102,502,817 - 102,586,946 (-)	NCBI		Celera
Cytogenetic Map	13	D1	NCBI
cM Map	13	52.24	NCBI

Tnpo1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955425	27,666,091 - 27,748,920 (-)	Ensembl
ChiLan1.0	NW_004955425	27,666,091 - 27,748,920 (-)	NCBI	ChiLan1.0	ChiLan1.0

TNPO1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	42,405,424 - 42,511,998 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	40,559,052 - 40,656,791 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	42,404,013 - 42,501,748 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	43,001,210 - 43,098,077 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	43,001,210 - 43,098,077 (-)	Ensembl			panPan2	panpan1.1

TNPO1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	55,795,737 - 55,859,366 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	55,799,907 - 55,851,213 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	52,730,047 - 52,826,981 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	56,278,862 - 56,375,623 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	56,278,940 - 56,370,542 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	53,338,799 - 53,435,381 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	54,107,115 - 54,203,851 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	55,032,870 - 55,094,744 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Tnpo1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	187,147,529 - 187,238,494 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936549	3,620,483 - 3,679,891 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936549	3,620,479 - 3,711,382 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TNPO1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	49,048,686 - 49,151,922 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	16	49,048,686 - 49,151,926 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	16	53,229,707 - 53,296,875 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TNPO1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	4	67,158,072 - 67,255,843 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	4	67,158,101 - 67,248,256 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666049	15,924,492 - 16,018,409 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tnpo1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624905	1,909,405 - 1,992,484 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Tnpo1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	3	197,670,145 - 197,756,728 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Tnpo1
1365 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	283
Count of miRNA genes:	192
Interacting mature miRNAs:	223
Transcripts:	ENSRNOT00000020543
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10755430	Coatc6	Coat color QTL 6		0.02576	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	2	13325041	58325041	Rat
7387318	Stl32	Serum triglyceride level QTL 32	3.2	0.0003	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	2	24117813	69117813	Rat
10755499	Bp389	Blood pressure QTL 389	2.61		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	20695736	231474293	Rat
738010	Lnnr3	Liver neoplastic nodule remodeling QTL 3	2.94		liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number (CMO:0001461)	2	1	42977529	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	206613235	Rat
9590080	Insglur4	Insulin/glucose ratio QTL 4	28.7	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	2	6152767	51152767	Rat
1579916	Bp270	Blood pressure QTL 270		0.003	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	16051883	61051883	Rat
731167	Glom4	Glomerulus QTL 4	2.4	0.0082	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	2	22038044	67038044	Rat
731166	Mamtr2	Mammary tumor resistance QTL 2		0.0001	mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	2	9623581	54623581	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	206613235	Rat
1302794	Stl27	Serum triglyceride level QTL 27	4.4	0.0001	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	2	27148328	145807373	Rat
9590095	Sffal3	Serum free fatty acids level QTL 3	6.78	0.001	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	2	28889991	73889991	Rat
1331764	Bp205	Blood pressure QTL 205	3.476		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	14368707	59368707	Rat
1358901	Cm38	Cardiac mass QTL 38	2		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	159440891	Rat
1600379	Mcs18	Mammary carcinoma susceptibility QTL 18	2.6		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	2	9623581	44538110	Rat
1331760	Bp206	Blood pressure QTL 206	3.62454		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	4265106	205135428	Rat
1358899	Kidm23	Kidney mass QTL 23	3.88		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	27148328	159440891	Rat
1358908	Bw49	Body weight QTL 49	3.36		body mass (VT:0001259)	body weight (CMO:0000012)	2	27148557	159440760	Rat
1358910	Kidm27	Kidney mass QTL 27	5.77		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	27148328	159440891	Rat
61355	Bp36	Blood pressure QTL 36	2.9		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	2	7605533	104774005	Rat
1358911	Kidm28	Kidney mass QTL 28	5.42		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	27148328	159440891	Rat
1358904	Cm39	Cardiac mass QTL 39	2.26		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	159440891	Rat
1354617	Bp240	Blood pressure QTL 240	4		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	28652666	83465677	Rat
1578664	Bmd9	Bone mineral QTL density 9	5		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	2	5736325	50736325	Rat
1358887	Bw50	Body weight QTL 50	2.39		body mass (VT:0001259)	body weight (CMO:0000012)	2	27148557	159440760	Rat
2290453	Scl55	Serum cholesterol level QTL 55	2.83		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	2	28652666	139067443	Rat
152025206	Hrtrt23	Heart rate QTL 23	5.98		heart pumping trait (VT:2000009)		2	30219200	171802126	Rat
1358894	Kidm24	Kidney mass QTL 24	4.03		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	27148328	159440891	Rat
731184	Mamtr4	Mammary tumor resistance QTL 4		0.0003	mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	2	18227137	63227137	Rat
152025204	Hrtrt22	Heart rate QTL 22	5.6		heart pumping trait (VT:2000009)		2	30219200	171802126	Rat
1354603	Bp243	Blood pressure QTL 243	3.9		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	28652666	73652666	Rat

Markers in Region

AU021749

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	30,207,778 - 30,207,985 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	29,056,469 - 29,056,675	NCBI	Rnor6.0
Rnor_5.0	2	48,238,800 - 48,239,006	UniSTS	Rnor5.0
RGSC_v3.4	2	29,477,539 - 29,477,745	UniSTS	RGSC3.4
Celera	2	26,240,582 - 26,240,788	UniSTS
Cytogenetic Map	2	q12	UniSTS

BE113776

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	30,211,623 - 30,211,715 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	29,060,314 - 29,060,405	NCBI	Rnor6.0
Rnor_5.0	2	48,242,645 - 48,242,736	UniSTS	Rnor5.0
RGSC_v3.4	2	29,481,384 - 29,481,475	UniSTS	RGSC3.4
Celera	2	26,244,427 - 26,244,518	UniSTS
Cytogenetic Map	2	q12	UniSTS

BE120883

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	30,208,110 - 30,208,264 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	29,056,801 - 29,056,954	NCBI	Rnor6.0
Rnor_5.0	2	48,239,132 - 48,239,285	UniSTS	Rnor5.0
RGSC_v3.4	2	29,477,871 - 29,478,024	UniSTS	RGSC3.4
Celera	2	26,240,914 - 26,241,067	UniSTS
RH 3.4 Map	2	54.1	UniSTS
Cytogenetic Map	2	q12	UniSTS

RH137682

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	30,212,559 - 30,212,766 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	29,061,250 - 29,061,456	NCBI	Rnor6.0
Rnor_5.0	2	48,243,581 - 48,243,787	UniSTS	Rnor5.0
RGSC_v3.4	2	29,482,320 - 29,482,526	UniSTS	RGSC3.4
Celera	2	26,245,363 - 26,245,569	UniSTS
RH 3.4 Map	2	53.4	UniSTS
Cytogenetic Map	2	q12	UniSTS

UniSTS:237090

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	30,207,789 - 30,207,904 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	29,056,480 - 29,056,594	NCBI	Rnor6.0
Rnor_5.0	2	48,238,811 - 48,238,925	UniSTS	Rnor5.0
RGSC_v3.4	2	29,477,550 - 29,477,664	UniSTS	RGSC3.4
Celera	2	26,240,593 - 26,240,707	UniSTS
Cytogenetic Map	2	q12	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001100692	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001399431	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001399432	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006231840	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008760668	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039102144	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039102145	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063281688	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC090323	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473955	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000020543 ⟹ ENSRNOP00000020543

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	31,948,161 - 32,001,760 (-)	Ensembl
mRatBN7.2 Ensembl	2	30,213,959 - 30,267,558 (-)	Ensembl
Rnor_6.0 Ensembl	2	29,056,219 - 29,121,104 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099589 ⟹ ENSRNOP00000093625

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	31,941,731 - 32,034,326 (-)	Ensembl
mRatBN7.2 Ensembl	2	30,214,903 - 30,300,375 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000110663 ⟹ ENSRNOP00000092200

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	31,941,731 - 32,003,820 (-)	Ensembl
mRatBN7.2 Ensembl	2	30,211,510 - 30,269,612 (-)	Ensembl

RefSeq Acc Id:

NM_001100692 ⟹ NP_001094162

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	31,941,731 - 32,003,590 (-)	NCBI
mRatBN7.2	2	30,207,529 - 30,269,388 (-)	NCBI
Rnor_6.0	2	29,056,219 - 29,121,104 (-)	NCBI
Rnor_5.0	2	48,238,550 - 48,308,427 (-)	NCBI
Celera	2	26,240,332 - 26,302,645 (-)	NCBI

Sequence:

show sequence

TTGCAGCAAACCAAGATGGAGTATGAGTGGAAACCTGACGAGCAAGGGCTTCAGCAGATTCTGC
AGCTGCTCAAGGAGTCCCAGTCCCCAGACACCACCATCCAGAGGACCGTGCAACAAAAACTGGA
ACAACTTAATCAATATCCAGATTTTAACAACTACTTAATTTTTGTTCTTACAAAATTAAAATCT
GAAGATGAGCCCACACGGTCATTGAGCGGTCTGATCTTGAAGAACAATGTGAAAGCTCATTTTC
AGAACTTCCCGAACGGTGTGACGGACTTCATCAAGAGTGAATGTCTAAATAATATTGGGGACTC
CTCTCCGCTGATCAGGGCCACTGTTGGTATTTTAATTACGACCATAGCCTCCAAGGGAGAACTG
CAGAATTGGCCTGACCTCTTACCAAAACTCTGTAGCCTGCTGGATTCTGAAGACTACAACACCT
GTGAGGGGGCATTCGGTGCCCTTCAGAAGATATGTGAGGACTCCGCGGAGATTTTAGACAGCGA
TGTCTTGGATCGCCCTCTCAACATCATGATCCCCAAGTTCTTACAGTTTTTCAAGCACAGTAGT
CCCAAAATAAGGTCTCACGCTGTTGCATGTGTCAATCAGTTCATCATCAGTCGGACCCAAGCGC
TCATGTTGCACATCGACTCCTTCATTGAGAACCTCTTTGCACTGGCTGGTGACGAGGAAGCCGA
GGTGCGGAAGAACGTGTGCCGAGCGCTTGTGATGCTGCTGGAAGTCCGGATGGACCGTCTGCTG
CCGCACATGCATAACATAGTCGAGTACATGCTTCAGAGGACCCAAGACCAAGATGAGAATGTGG
CTCTGGAGGCCTGTGAATTCTGGCTGACTTTGGCTGAACAGCCAATATGCAAAGATGTACTTGT
AAGGCATCTGCCTAAGTTGATTCCCGTGTTAGTGAATGGCATGAAGTACTCAGATATAGACATC
ATCCTGCTGAAGGGGGATGTTGAAGAAGACGAGGCCATCCCTGATAGTGAGCAGGATATACGGC
CACGGTTCCATCGCTCAAGGACGGTGGCTCAGCAGCATGAAGAGGATGGGATTGAAGAGGATGA
CGACGACGACGATGAGATTGATGATGACGATACCATTTCTGACTGGAATCTCAGAAAGTGTTCT
GCTGCTGCTCTCGATGTTCTCGCAAACGTTTATCGTGATGAGCTTTTGCCACACATTTTGCCAC
TTTTGAAAGAATTGCTTTTCCATCACGAGTGGGTTGTGAAAGAGTCTGGCATCTTGGTTTTAGG
AGCAATTGCTGAAGGTTGCATGCAAGGCATGATTCCGTACCTGCCCGAGCTCATTCCTCACCTC
ATTCAGTGCCTTTCTGACAAAAAGGCTCTTGTGCGTTCCATCACCTGCTGGACTCTAAGCCGCT
ATGCACACTGGGTAGTCAGCCAGCCACCAGATACATACCTGAAGCCATTAATGACGGAATTGCT
GAAGCGTATCCTGGATAGCAACAAGAGAGTACAAGAAGCTGCTTGCAGTGCCTTTGCTACGTTA
GAAGAGGAGGCTTGTACAGAGCTTGTCCCCTACCTTGCTTATATACTCGACACCCTCGTCTTCG
CCTTCAGTAAATACCAGCACAAGAACCTGCTCATTCTGTACGATGCCATAGGGACACTAGCAGA
TTCAGTGGGACATCATTTAAACAAGCCAGAATATATTCAGATGCTAATGCCTCCTCTGATCCAG
AAGTGGAACATGTTAAAAGATGAAGACAAGGATCTTTTCCCTTTACTTGAGTGCCTCTCATCTG
TTGCCACAGCCTTGCAGTCTGGTTTCCTTCCATATTGTGAACCTGTGTATCAGCGTTGTGTAAA
CCTGGTACAGAAGACACTAGCACAAGCCATGCTAAACAATGCTCAGCCAGAACAATATGAAGCT
CCAGATAAAGACTTTATGATTGTGGCTCTTGACTTACTCAGTGGCCTGGCTGAAGGACTGGGAG
GCAACATTGAGCAGCTGGTGGCCCGAAGTAACATCCTGACACTGATGTATCAATGCATGCAGGA
TAAAATGCCCGAAGTTCGGCAGAGTTCTTTTGCATTACTAGGTGATCTGACTAAAGCTTGCTTT
CAGCACGTTAAGCCTTGTATAGCTGATTTCATGCCAATATTGGGAACCAATCTAAATCCAGAGT
TTATTTCAGTCTGCAACAACGCCACCTGGGCAATTGGGGAAATATCAATTCAAATGGGCATAGA
GATGCAGCCTTACATCCCTATGGTGCTGCACCAGCTCGTGGAGATCATTAACAGACCCAACACC
CCAAAGACGCTGTTGGAGAACACAGCAATAACAATTGGTCGTCTTGGTTACGTTTGTCCTCAAG
AGGTGGCCCCCATGCTACAGCAGTTTATAAGACCCTGGTGTACCTCTCTGAGAAACATAAGAGA
CAATGAAGAAAAAGATTCAGCATTCCGTGGGATTTGTACCATGATCAGTGTGAATCCTAGTGGC
GTAATCCAAGATTTTATATTTTTTTGTGATGCTGTTGCATCATGGATTAATCCCAAAGACGACC
TCAGAGACATGTTCTGTAAGATCCTTCATGGATTTAAAAACCAAGTTGGGGATGAAAATTGGAG
GCGATTCTCTGACCAGTTTCCTCTTCCCTTAAAAGAGCGTCTTGCGGCTTTTTATGGTGTTTAA
TCTAATACACTTAAGCTGCAGTCCCAAAACTAGGGGTCCGTCAGTCTTGGAGACTATATGGGAG
CCTCTGCACCCAGGGAAAATGTTACCCTTTACAGGGGGGAAGGGTAAACCAGTAGGGAATACAG
TACAATCCCAACCCTACTGGGAGGGGCGGGAGGGAGGTGTTGCCGTCACTGTATTAAGTCGATG
TTGGGAAATGTTTTAACATCTGGAGCCTTTGTGGGTGGAAATCTGTCTCCAATTACAACTCTGC
ACTGGATGTGAAGAAGCAAAAACTATTCCGTCTACTCACAGAACAGTACTTTCTGGAATATTAT
GGGGAATTGTACCAAACAAGAACCACGTAAGCAATGCCTAGGGATAAGGAGGAGGAAAAGCACA
TGGTCCACAACAAAGGGCACCTAAGAGTGGGAAGCTGCAACAGTAAGGAAGCTTTTTATTAAAG
GTTTTATATAAATTTTCCCACATCATGGGGCCTTGTTTTGCATGCTGATGAAGAGCTACTTAGA
ACTAACGATTAAAATCAGCTGCCTCCCCTGGTTAGACGCAGGTTCTTGAAAGTTACAATTTAAG
GTACCCCCAAAAAGTTGGAAATAAAAGGAAACAAATTTGAACAACGAAGCACCCTGTGACATGC
CGACGCGCCACTCCTTTTACCTTTGCGGGCTGGGCAGGGAGGGAGGAATCAATGGGGTCGGGGT
CAAAGGAAAGGTGACATCTAATTTTACATTAAAACGTTAGTGGATATAAGTTCATGGTTGTACT
TCTTAGATTTAATTTCTAGGCCGACATGTTATCTAAGGTGCAGTTTAAGGTCCAGGCATGCGCT
CGGGCTCATAGTGATTGACGTGGTGTGCATTAGTGACCGCAGCATGCTCGCCTCATAGAGTGCG
GTTGGTATCCATTCACCGATGTCGCGCCAGTTTGGGTTGCCGTTTACCAGTTCAATATAGCCCT
GCATTTAAAATTCCTTTTGAGATTCGTGGATTTTATTTTTATTAAGAATATAGATATATAAAGT
ACTGTAGTTTACAACTAGGCCTTGAAATATCTTTTTAGGATCTGTTAGGAATAAGATTGATATT
GTATTGTGTGTAACCTGCACAATGTGGAAAGCTGATATACCTGTGCAAAATCTTTGCCTCTGTG
CTGTCAGTGTGGTGTGCTTTCTGCATGGTTATATGCGACTAGTAATTTTATCAAATTTCAAATT
ACATGGTAAAAGATCTGTAAAAGGCTGCATAAATGTTAGTTGGCACATAAAGACAATTGTAGAA
GTTGAAACATGATTGCTATATTTCAATGTTTATTCCCACTCAACATATTGCCTCTAAGCTTTCC
TTTAATTTTTTTTTTTATTTTTATTTGTGTTCGAAGCATGATCTTAAAGATATGTTTAAGTTAA
TGGATGTAATGCAGGGTTCCTACACTGTATTGGCGCATGTTGGTGGCCCTCTGTGTCCTAGGCT
TGTGCACATAGGGCACGTACAAAGCTACAGAGTGAGAGTTGGTTTGGATCCTCTTCATTTCATT
TGTTTGGCTTTTCTGTTATTTTTTTCCCTCTACTTACATGTATTTCTGTGAATAAATCCTTGTT
AAGTTAACCCTTTACTTTTCCTTCCATGTGTATTTTCTTATATACTGTGAATGTGAAGACCCTA
ACTGGTACACTTGATCTTATGTCCATATGAAAGTGCAAATCTTTATTAATTTGGATTGCCTGAG
CAGTGTGTATCCCATGATGATGAAGGAAAATGGAGAGATTTTTCCTTTTAGCTCTGCTGGTCAG
AGATGAAGCCACACCTTTCCATTTTTCAATGCTGCATATTTAATCTGCAAAAAAAGTTAAGCCA
TAACAGCCTTTTTCTATTTTACTTTGTCACCTTTGCATTGCAGAATAAATACCGAATAACCGTT
TTTTATAAGCAGTCGCTCCTCTTTGCATGGTTCTGTTCTATAAAAGTGACTGATAACGGCCATT
GCACTGAAGTGTGAGCTGTGTGTGTGTGTGTGACTTTATAAATACAATTTTAAAACATTTCACA
TGCATGGTAGCATGCACAAAGGTTTTTGTTGTCGTGTATATGTTTGTTTTAACATGTTCTTTTA
CTTTTTTTCTTTTTATTTTGGCTTTGCAAATTTCAGTCTGTAGGGCCTGAAATAAAACCATATG
TAGTGCCCAGTAAGCTAGACTCGAGGGTGTCTGGTATTTTCACTTTTTAGTAAATTACCTTACT
GGAAGCTTAAAATTTGCTTCTGAGTTGGCCTTCAAAGCTAGAGTGGAATAGCTGTTCTAGCCTT
AGGTTGTAGTGTTCCCTGCAGCGCCTCAGATACTCGGGGAAGTTAATATAAGAGATAGTCTTAC
GTAAGTAGTGAATAAGGAAACGGCCACATTGTCCAGTAATGCATAAGAAGTGGAGGAACGTTTT
CTGGACTTGTGATAAACAATTCTGTTAAGTAAAAGAGCAGTTCTATTACCTGTCTAATTAAGAA
TTTATTTCCAATTTAGCAGTTATGCAGCTCAAAAACAATATTTGGCTTTATAGTAAATTTGTTT
CTAAATCTAATAACTTTAAAATAGAAGCTTAAGTAAATATTACTTAAAACCTAAAACTAGGGTG
GTTTTCTTTTCTAATGCAGCTTTCCCTGTTGAGGCTTTTGTTTCTTCTTAAATTTATATTCTAT
TTTAGACAACATCGTATATAGCACAGGAATTTGCAGAAGCCATTTAAGTTTTTTGAGGTCAGCG
CTGAGTTAGCATTTATTGTTTTGATGAGACGTAACACATCATGGGATATATATATATATATATA
TAAAGAACTTAATTCTTGTGGTGCAGTGTTGATAGTTTTGAATGTTGCCTAAATGTCTATGAGG
TTGTGAGTTTGTCATTGTTACATTCCAGTGTTTCTGCCTCTTGGCATGCTTAAAGCACGGCTTA
CTTCATCCGCTCCTTACACACTAAACTGCTCTTAGTGTGCTCAACTACAGAGATAGCCGCTGCT
GAGTGATGTAGATTTTCTACTTGAATATTTTTATGTTGTAGGAACCTCAGGAGGTCAGTGTTTA
CTGTTTTATATATGCCTTCTTTTTCCTGTTTGAGCTTCTCTCTCTGAAGGATTCTAACAGAACA
AAAGCTGCTGATCAACCTAAGTTGGAAACAGAAAGTGTGTCTAGTGTCGTTGAAACACGTACTT
AGCAGTCCCATGTCACAGCCCATTAATTAGCGAGTGAACTTAGTGCCACAGGTGTTCATTTACT
TGGGAAATGGTTTTGCTTTTTGTATTGTCTAATCTCTTTAATGACTTCATACTGTGTAAGAAAA
ATCACTTTTGTATTGTTTGTTGGTTATTTCCAAATAACTGACTTGTAAATACCCTTAGAGCCAG
TTCGATGCTTTACATCACTGCTACCTGATTTTGTTATGCAGCCTAGATCTCAGATCGCAGAACA
CTTAACCAAGCCATTACATCTTAAAGCAAAACAGGTAGCAACATTTTGTAATTAACATTGATAA
ACACTGTGATTTTTTTGGTTAAAACTTTTTCATTGATCTGAATTGCTTAAATTGCATATATTGT
AAAATAGAGTCAGATGTATATTTTAAAATAATTTCAGCTAACTTTCCTCTGACTGCTTTGTCTA
CTCAGTTATGAAATATTCAGATACAAGTTTTATCTCAGGTGAATATCCTTGTATCATTTTGCTT
TGGTGACATGTTTATAAAGAAAGATCATCATACCTTCTAGTCTGTGGGGGTTTGTGAGGTGTTT
GGTTTTTTTGTTTTGTTTTGTTTTGTTTTGTTAGAATTTAATGTGTTTTCTCCCCAGTTAGTCA
GTTTTGCCCCTCTCCAATTGTTTTATCAGACTGGAGAGAGAAATAAAAGGCTCTCCTCACATTT
GATACGGAGATTTAACTGAGAATGAGTTGAGTTTGGTCCTCTCCTTTTCCAGACACTCAAAATA
CAAAAGTGGAACCTTTCTCCCTACATAAAATTCTGCAAAGTTGGGGTGCCAGAATTAAATTATG
TGTTGAACTCTTGTCTCCATTTAACACCTTTGCAGTGACTTTTTTTTGCTTCACATAGTTAATT
ATATTCATATTGAATGTATTAACAGATAGAGTGCAAATGCACTCTTCCCGAGGGAAGCGTGTGT
GGTGCACAGCTGCAGCCCTGACCCCTCCTCTGGGGCTTCAGGTGCACACAGCCTCCTTGTGGAG
CTACTTCAGCAACTGTTACACGGTGGGGGGACACTAATTGTTGCTGCTAGTGCTGTTTAATGAC
GTGGTCATGGGAAGCTATAAGAAAACTGGTTAACACCCTGGGATAATTGAGTGGCCTGTGTTGG
TAAGGATTTCTCTAGTTCAGTGCCGTGCGGTAGCATTGTATATCAGCTGGAGCATTTCATGCTG
CATTAAATATGGCAGTGCTTCTAAGCCTCGTTAACGTTAAGTTTCACATGAAAGTTAGCTCCTC
TTACCTGTGTGCTTTCTAGGTAACTGGAATCTAACTTCAGGCTTGATACAGATCTTCTCCCTGT
TGGTATTACATATATATAGATAGATAGATAATTCTCAATGCCTAATTATTATACTTATACATTT
GTAAGGTATAAGCATAATTGCAGCAACTGTTGTTATAGTTTGTATCCCAGAGTTTATTGTGTTG
ACATAAAAGATGTGTAGCAGCAGAATGTGTGCATGACCTTGAGGGAAGTTCAGGCTGGTTTTCT
TTCCCCCCTCTGTACATTGAACAACCAAGGCAAATGTATTGCCAATCAGAGATCACTAATTACA
AAGCTCTTTTCCCTTTCAGTAGGAGCTTTTGTTTGTTATCCATTGCTGCCGTACTGTGGCTCAG
TTCTGAGGAACCCTATGTCACGGGTCTAGTCATCTTGTCAAATGCCTGCTCTAACATGCTTAGC
CTACAAGGCAGTGTTGTCTCCTCCCAATGGTCACCTCATAAAGACGTTCCCCTCATCTTTCTGT
CACTGCTCTCCTATGTGGATATATATATATAACCAGACTGATTCTTTGGTTTTTTTATGGAGAT
AATAATTAGATAATACTATGTAATTAATTTTACTTGGTAGATTATCATCTTAAGAGATACTTAA
ATGTGGTAAATCACTTCATATTATGAGAGTTTTACACTTAGTATTCATGTTAACATTGGGTGCA
ATAACTTAGTAGAACCTGCTTAGTTATAAATAACTGGATCTTTCTGCTGACAACTTAGGTTGTA
TGAGTTATGCTTAAAAGCTTTAAATCTGATGTTTCCTGTACCTGCCACACTATGTTAGAATGTG
TCCTTCAAACATATCCTGCAACTTCTCAAACTGTACTAAATTGGTAGTTCTTGAAGTCTAACTC
TGTGCTAACAGATCTTCATTTTAAATAGAATACGGTTTTAATTTTTGATAAGCTGCTGAATTTT
AAAGAGAGTTTTTTGGGGCCACCAAATATTTTGGATCATGCAGAGAATATATATTGTACTGTAG
TAATTTTGTATTTACATTTGTATGATGTGACATAATAGATGTGAATGTTAATCACTGCTTGACT
ATGTTAATAAAGTTGTTTAACTATA

hide sequence

RefSeq Acc Id:

NM_001399431 ⟹ NP_001386360

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	31,941,731 - 32,034,326 (-)	NCBI
mRatBN7.2	2	30,207,529 - 30,300,129 (-)	NCBI

RefSeq Acc Id:

NM_001399432 ⟹ NP_001386361

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	31,941,731 - 32,003,820 (-)	NCBI
mRatBN7.2	2	30,207,529 - 30,269,618 (-)	NCBI

RefSeq Acc Id:

XM_006231840 ⟹ XP_006231902

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	31,941,731 - 32,010,000 (-)	NCBI
mRatBN7.2	2	30,211,191 - 30,275,800 (-)	NCBI
Rnor_6.0	2	29,056,219 - 29,126,882 (-)	NCBI
Rnor_5.0	2	48,238,550 - 48,308,427 (-)	NCBI

Sequence:

show sequence

ATTTTTAGTTGTCAGGCTATATACTGATTTTTCAGATGTTAGGCTTTTACAATAGTGAAGAGTG
CCTTTACTCTTTTACCTCAGACAGAGCTATCCAGTATTTGTTGTATGTGTGTTTTCGATTGGTT
TCCCAGATTGCAGACTGATATTTCTAAGAGACCTGGACCCTTATTTGATACCTGAGAGGACTGG
TGGATGGTCTTCGTTTTGTTGTTCTTTGCTTGATGTTTTGAGACAAAGTCTTGAATTTGTCATC
TCCCTGCCCCTCAGGACTGTGATACAGCACCACCACTCTGGCAGGAGTGTACTCTGAAGCCAGC
AAACCAAGATGGAGTATGAGTGGAAACCTGACGAGCAAGGGCTTCAGCAGATTCTGCAGCTGCT
CAAGGAGTCCCAGTCCCCAGACACCACCATCCAGAGGACCGTGCAACAAAAACTGGAACAACTT
AATCAATATCCAGATTTTAACAACTACTTAATTTTTGTTCTTACAAAATTAAAATCTGAAGATG
AGCCCACACGGTCATTGAGCGGTCTGATCTTGAAGAACAATGTGAAAGCTCATTTTCAGAACTT
CCCGAACGGTGTGACGGACTTCATCAAGAGTGAATGTCTAAATAATATTGGGGACTCCTCTCCG
CTGATCAGGGCCACTGTTGGTATTTTAATTACGACCATAGCCTCCAAGGGAGAACTGCAGAATT
GGCCTGACCTCTTACCAAAACTCTGTAGCCTGCTGGATTCTGAAGACTACAACACCTGTGAGGG
GGCATTCGGTGCCCTTCAGAAGATATGTGAGGACTCCGCGGAGATTTTAGACAGCGATGTCTTG
GATCGCCCTCTCAACATCATGATCCCCAAGTTCTTACAGTTTTTCAAGCACAGTAGTCCCAAAA
TAAGGTCTCACGCTGTTGCATGTGTCAATCAGTTCATCATCAGTCGGACCCAAGCGCTCATGTT
GCACATCGACTCCTTCATTGAGAACCTCTTTGCACTGGCTGGTGACGAGGAAGCCGAGGTGCGG
AAGAACGTGTGCCGAGCGCTTGTGATGCTGCTGGAAGTCCGGATGGACCGTCTGCTGCCGCACA
TGCATAACATAGTCGAGTACATGCTTCAGAGGACCCAAGACCAAGATGAGAATGTGGCTCTGGA
GGCCTGTGAATTCTGGCTGACTTTGGCTGAACAGCCAATATGCAAAGATGTACTTGTAAGGCAT
CTGCCTAAGTTGATTCCCGTGTTAGTGAATGGCATGAAGTACTCAGATATAGACATCATCCTGC
TGAAGGGGGATGTTGAAGAAGACGAGGCCATCCCTGATAGTGAGCAGGATATACGGCCACGGTT
CCATCGCTCAAGGACGGTGGCTCAGCAGCATGAAGAGGATGGGATTGAAGAGGATGACGACGAC
GACGATGAGATTGATGATGACGATACCATTTCTGACTGGAATCTCAGAAAGTGTTCTGCTGCTG
CTCTCGATGTTCTCGCAAACGTTTATCGTGATGAGCTTTTGCCACACATTTTGCCACTTTTGAA
AGAATTGCTTTTCCATCACGAGTGGGTTGTGAAAGAGTCTGGCATCTTGGTTTTAGGAGCAATT
GCTGAAGGTTGCATGCAAGGCATGATTCCGTACCTGCCCGAGCTCATTCCTCACCTCATTCAGT
GCCTTTCTGACAAAAAGGCTCTTGTGCGTTCCATCACCTGCTGGACTCTAAGCCGCTATGCACA
CTGGGTAGTCAGCCAGCCACCAGATACATACCTGAAGCCATTAATGACGGAATTGCTGAAGCGT
ATCCTGGATAGCAACAAGAGAGTACAAGAAGCTGCTTGCAGTGCCTTTGCTACGTTAGAAGAGG
AGGCTTGTACAGAGCTTGTCCCCTACCTTGCTTATATACTCGACACCCTCGTCTTCGCCTTCAG
TAAATACCAGCACAAGAACCTGCTCATTCTGTACGATGCCATAGGGACACTAGCAGATTCAGTG
GGACATCATTTAAACAAGCCAGAATATATTCAGATGCTAATGCCTCCTCTGATCCAGAAGTGGA
ACATGTTAAAAGATGAAGACAAGGATCTTTTCCCTTTACTTGAGTGCCTCTCATCTGTTGCCAC
AGCCTTGCAGTCTGGTTTCCTTCCATATTGTGAACCTGTGTATCAGCGTTGTGTAAACCTGGTA
CAGAAGACACTAGCACAAGCCATGCTAAACAATGCTCAGCCAGAACAATATGAAGCTCCAGATA
AAGACTTTATGATTGTGGCTCTTGACTTACTCAGTGGCCTGGCTGAAGGACTGGGAGGCAACAT
TGAGCAGCTGGTGGCCCGAAGTAACATCCTGACACTGATGTATCAATGCATGCAGGATAAAATG
CCCGAAGTTCGGCAGAGTTCTTTTGCATTACTAGGTGATCTGACTAAAGCTTGCTTTCAGCACG
TTAAGCCTTGTATAGCTGATTTCATGCCAATATTGGGAACCAATCTAAATCCAGAGTTTATTTC
AGTCTGCAACAACGCCACCTGGGCAATTGGGGAAATATCAATTCAAATGGGCATAGAGATGCAG
CCTTACATCCCTATGGTGCTGCACCAGCTCGTGGAGATCATTAACAGACCCAACACCCCAAAGA
CGCTGTTGGAGAACACAGCAATAACAATTGGTCGTCTTGGTTACGTTTGTCCTCAAGAGGTGGC
CCCCATGCTACAGCAGTTTATAAGACCCTGGTGTACCTCTCTGAGAAACATAAGAGACAATGAA
GAAAAAGATTCAGCATTCCGTGGGATTTGTACCATGATCAGTGTGAATCCTAGTGGCGTAATCC
AAGATTTTATATTTTTTTGTGATGCTGTTGCATCATGGATTAATCCCAAAGACGACCTCAGAGA
CATGTTCTGTAAGATCCTTCATGGATTTAAAAACCAAGTTGGGGATGAAAATTGGAGGCGATTC
TCTGACCAGTTTCCTCTTCCCTTAAAAGAGCGTCTTGCGGCTTTTTATGGTGTTTAATCTAATA
CACTTAAGCTGCAGTCCCAAAACTAGGGGTCCGTCAGTCTTGGAGACTATATGGGAGCCTCTGC
ACCCAGGGAAAATGTTACCCTTTACAGGGGGGAAGGGTAAACCAGTAGGGAATACAGTACAATC
CCAACCCTACTGGGAGGGGCGGGAGGGAGGTGTTGCCGTCACTGTATTAAGTCGATGTTGGGAA
ATGTTTTAACATCTGGAGCCTTTGTGGGTGGAAATCTGTCTCCAATTACAACTCTGCACTGGAT
GTGAAGAAGCAAAAACTATTCCGTCTACTCACAGAACAGTACTTTCTGGAATATTATGGGGAAT
TGTACCAAACAAGAACCACGTAAGCAATGCCTAGGGATAAGGAGGAGGAAAAGCACATGGTCCA
CAACAAAGGGCACCTAAGAGTGGGAAGCTGCAACAGTAAGGAAGCTTTTTATTAAAGGTTTTAT
ATAAATTTTCCCACATCATGGGGCCTTGTTTTGCATGCTGATGAAGAGCTACTTAGAACTAACG
ATTAAAATCAGCTGCCTCCCCTGGTTAGACGCAGGTTCTTGAAAGTTACAATTTAAGGTACCCC
CAAAAAGTTGGAAATAAAAGGAAACAAATTTGAACAACGAAGCACCCTGTGACATGCCGACGCG
CCACTCCTTTTACCTTTGCGGGCTGGGCAGGGAGGGAGGAATCAATGGGGTCGGGGTCAAAGGA
AAGGTGACATCTAATTTTACATTAAAACGTTAGTGGATATAAGTTCATGGTTGTACTTCTTAGA
TTTAATTTCTAGGCCGACATGTTATCTAAGGTGCAGTTTAAGGTCCAGGCATGCGCTCGGGCTC
ATAGTGATTGACGTGGTGTGCATTAGTGACCGCAGCATGCTCGCCTCATAGAGTGCGGTTGGTA
TCCATTCACCGATGTCGCGCCAGTTTGGGTTGCCGTTTACCAGTTCAATATAGCCCTGCATTTA
AAATTCCTTTTGAGATTCGTGGATTTTATTTTTATTAAGAATATAGATATATAAAGTACTGTAG
TTTACAACTAGGCCTTGAAATATCTTTTTAGGATCTGTTAGGAATAAGATTGATATTGTATTGT
GTGTAACCTGCACAATGTGGAAAGCTGATATACCTGTGCAAAATCTTTGCCTCTGTGCTGTCAG
TGTGGTGTGCTTTCTGCATGGTTATATGCGACTAGTAATTTTATCAAATTTCAAATTACATGGT
AAAAGATCTGTAAAAGGCTGCATAAATGTTAGTTGGCACATAAAGACAATTGTAGAAGTTGAAA
CATGATTGCTATATTTCAATGTTTATTCCCACTCAACATATTGCCTCTAAGCTTTCCTTTAATT
TTTTTTTTTATTTTTATTTGTGTTCGAAGCATGATCTTAAAGATATGTTTAAGTTAATGGATGT
AATGCAGGGTTCCTACACTGTATTGGCGCATGTTGGTGGCCCTCTGTGTCCTAGGCTTGTGCAC
ATAGGGCACGTACAAAGCTACAGAGTGAGAGTTGGTTTGGATCCTCTTCATTTCATTTGTTTGG
CTTTTCTGTTATTTTTTTCCCTCTACTTACATGTATTTCTGTGAATAAATCCTTGTTAAGTTAA
CCCTTTACTTTTCCTTCCATGTGTATTTTCTTATATACTGTGAATGTGAAGACCCTAACTGGTA
CACTTGATCTTATGTCCATATGAAAGTGCAAATCTTTATTAATTTGGATTGCCTGAGCAGTGTG
TATCCCATGATGATGAAGGAAAATGGAGAGATTTTTCCTTTTAGCTCTGCTGGTCAGAGATGAA
GCCACACCTTTCCATTTTTCAATGCTGCATATTTAATCTGCAAAAAAAGTTAAGCCATAACAGC
CTTTTTCTATTTTACTTTGTCACCTTTGCATTGCAGAATAAATACCGAATAACCGTTTTTTATA
AGCAGTCGCTCCTCTTTGCATGGTTCTGTTCTATAAAAGTGACTGATAACGGCCATTGCACTGA
AGTGTGAGCTGTGTGTGTGTGTGTGACTTTATAAATACAATTTTAAAACATTTCACATGCATGG
TAGCATGCACAAAGGTTTTTGTTGTCGTGTATATGTTTGTTTTAACATGTTCTTTTACTTTTTT
TCTTTTTATTTTGGCTTTGCAAATTTCAGTCTGTAGGGCCTGAAATAAAACCATATGTAGTGCC
CAGTAAGCTAGACTCGAGGGTGTCTGGTATTTTCACTTTTTAGTAAATTACCTTACTGGAAGCT
TAAAATTTGCTTCTGAGTTGGCCTTCAAAGCTAGAGTGGAATAGCTGTTCTAGCCTTAGGTTGT
AGTGTTCCCTGCAGCGCCTCAGATACTCGGGGAAGTTAATATAAGAGATAGTCTTACGTAAGTA
GTGAATAAGGAAACGGCCACATTGTCCAGTAATGCATAAGAAGTGGAGGAACGTTTTCTGGACT
TGTGATAAACAATTCTGTTAAGTAAAAGAGCAGTTCTATTACCTGTCTAATTAAGAATTTATTT
CCAATTTAGCAGTTATGCAGCTCAAAAACAATATTTGGCTTTATAGTAAATTTGTTTCTAAATC
TAATAACTTTAAAATAGAAGCTTAAGTAAATATTACTTAAAACCTAAAACTAGGGTGGTTTTCT
TTTCTAATGCAGCTTTCCCTGTTGAGGCTTTTGTTTCTTCTTAAATTTATATTCTATTTTAGAC
AACATCGTATATAGCACAGGAATTTGCAGAAGCCATTTAAGTTTTTTGAGGTCAGCGCTGAGTT
AGCATTTATTGTTTTGATGAGACGTAACACATCATGGGATATATATATATATATATATAAAGAA
CTTAATTCTTGTGGTGCAGTGTTGATAGTTTTGAATGTTGCCTAAATGTCTATGAGGTTGTGAG
TTTGTCATTGTTACATTCCAGTGTTTCTGCCTCTTGGCATGCTTAAAGCACGGCTTACTTCATC
CGCTCCTTACACACTAAACTGCTCTTAGTGTGCTCAACTACAGAGATAGCCGCTGCTGAGTGAT
GTAGATTTTCTACTTGAATATTTTTATGTTGTAGGAACCTCAGGAGGTCAGTGTTTACTGTTTT
ATATATGCCTTCTTTTTCCTGTTTGAGCTTCTCTCTCTGAAGGATTCTAACAGAACAAAAGCTG
CTGATCAACCTAAGTTGGAAACAGAAAGTGTGTCTAGTGTCGTTGAAACACGTACTTAGCAGTC
CCATGTCACAGCCCATTAATTAGCGAGTGAACTTAGTGCCACAGGTGTTCATTTACTTGGGAAA
TGGTTTTGCTTTTTGTATTGTCTAATCTCTTTAATGACTTCATACTGTGTAAGAAAAATCACTT
TTGTATTGTTTGTTGGTTATTTCCAAATAACTGACTTGTAAATACCCTTAGAGCCAGTTCGATG
CTTTACATCACTGCTACCTGATTTTGTTATGCAGCCTAGATCTCAGATCGCAGAACACTTAACC
AAGCCATTACATCTTAAAGCAAAACAGGTAGCAACATTTTGTAATTAACATTGATAAACACTGT
GATTTTTTTGGTTAAAACTTTTTCATTGATCTGAATTGCTTAAATTGCATATATTGTAAAATAG
AGTCAGATGTATATTTTAAAATAATTTCAGCTAACTTTCCTCTGACTGCTTTGTCTACTCAGTT
ATGAAATATTCAGATACAAGTTTTATCTCAGGTGAATATCCTTGTATCATTTTGCTTTGGTGAC
ATGTTTATAAAGAAAGATCATCATACCTTCTAGTCTGTGGGGGTTTGTGAGGTGTTTGGTTTTT
TTGTTTTGTTTTGTTTTGTTTTGTTAGAATTTAATGTGTTTTCTCCCCAGTTAGTCAGTTTTGC
CCCTCTCCAATTGTTTTATCAGACTGGAGAGAGAAATAAAAGGCTCTCCTCACATTTGATACGG
AGATTTAACTGAGAATGAGTTGAGTTTGGTCCTCTCCTTTTCCAGACACTCAAAATACAAAAGT
GGAACCTTTCTCCCTACATAAAATTCTGCAAAGTTGGGGTGCCAGAATTAAATTATGTGTTGAA
CTCTTGTCTCCATTTAACACCTTTGCAGTGACTTTTTTTTGCTTCACATAGTTAATTATATTCA
TATTGAATGTATTAACAGATAGAGTGCAAATGCACTCTTCCCGAGGGAAGCGTGTGTGGTGCAC
AGCTGCAGCCCTGACCCCTCCTCTGGGGCTTCAGGTGCACACAGCCTCCTTGTGGAGCTACTTC
AGCAACTGTTACACGGTGGGGGGACACTAATTGTTGCTGCTAGTGCTGTTTAATGACGTGGTCA
TGGGAAGCTATAAGAAAACTGGTTAACACCCTGGGATAATTGAGTGGCCTGTGTTGGTAAGGAT
TTCTCTAGTTCAGTGCCGTGCGGTAGCATTGTATATCAGCTGGAGCATTTCATGCTGCATTAAA
TATGGCAGTGCTTCTAAGCCTCGTTAACGTTAAGTTTCACATGAAAGTTAGCTCCTCTTACCTG
TGTGCTTTCTAGGTAACTGGAATCTAACTTCAGGCTTGATACAGATCTTCTCCCTGTTGGTATT
ACATATATATAGATAGATAGATAATTCTCAATGCCTAATTATTATACTTATACATTTGTAAGGT
ATAAGCATAATTGCAGCAACTGTTGTTATAGTTTGTATCCCAGAGTTTATTGTGTTGACATAAA
AGATGTGTAGCAGCAGAATGTGTGCATGACCTTGAGGGAAGTTCAGGCTGGTTTTCTTTCCCCC
CTCTGTACATTGAACAACCAAGGCAAATGTATTGCCAATCAGAGATCACTAATTACAAAGCTCT
TTTCCCTTTCAGTAGGAGCTTTTGTTTGTTATCCATTGCTGCCGTACTGTGGCTCAGTTCTGAG
GAACCCTATGTCACGGGTCTAGTCATCTTGTCAAATGCCTGCTCTAACATGCTTAGCCTACAAG
GCAGTGTTGTCTCCTCCCAATGGTCACCTCATAAAGACGTTCCCCTCATCTTTCTGTCACTGCT
CTCCTATGTGGATATATATATATAACCAGACTGATTCTTTGGTTTTTTTATGGAGATAATAATT
AGATAATACTATGTAATTAATTTTACTTGGTAGATTATCATCTTAAGAGATACTTAAATGTGGT
AAATCACTTCATATTATGAGAGTTTTACACTTAGTATTCATGTTAACATTGGGTGCAATAACTT
AGTAGAACCTGCTTAGTTATAAATAACTGGATCTTTCTGCTGACAACTTAGGTTGTATGAGTTA
TGCTTAAAAGCTTTAAATCTGATGTTTCCTGTACCTGCCACACTATGTTAGAATGTGTCCTTCA
AACATATCCTGCAACTTCTCAAACTGTACTAAATTGGTAGTTCTTGAAGTCTAACTCTGTGCTA
ACAGATCTTCATTTTAAATAGAATACGGTTTTAATTTTTGATAAGCTGCTGAATTTTAAAGAGA
GTTTTTTGGGGCCACCAAATATTTTGGATCATGCAGAGAATATATATTGTACTGTAGTAATTTT
GTATTTACATTTGTATGATGTGACATAATAGATGTGAATGTTAATCACTGCTTGACTATGTTAA
TAAAGTTGTTTAACTATA

hide sequence

RefSeq Acc Id:

XM_008760668 ⟹ XP_008758890

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	31,941,731 - 32,003,781 (-)	NCBI
mRatBN7.2	2	30,211,191 - 30,269,526 (-)	NCBI
Rnor_6.0	2	29,056,219 - 29,121,820 (-)	NCBI

Sequence:

show sequence

TTACATGATTTTTCTTGTTTATCCTTCATTCCACAGCCCTTTTGTAAGGCAATTATTTCGTGAT
GGAATTTATTTCACTTACTGAGTTCATATGTTGAAGTTTATGAAAGGGTGAATTTTTCTACGAA
GGGTGAAGTTCTACAAAGGTTGCATTTAATGTTTTTGAGTCGTGGTTATGATTGCAACGTGCCC
TCAATATTTTATTTGAACGACTAATAGCATTGTAGTGTTTTTATTTCTACTATTGAGCTGTCAG
AGGGAGTTTCCCCCATTCCGAAAGTTGCTGTCGTCATTCCACCACGCTTATTTAAAATAATAAC
CCGAATCCGATTTCTACTGAGGCTTCTCAGGGGCTTCCTTTTGAGCAGTCTTCGTCTAAGTAGC
CCGGCTGCATGAGTTGTGTTGGTCTGAGAGTGCTCCGTGGCACTAGGACCCAGGGGGCTCCCGT
GAGCGGATCTTGGGGCCAGATTGCAAATTCGTGGTGACTCAGTCTGGTCAGCTCCTGGCGCTCT
AGGCGGCCGCGGCGCACAGCACAGACACAGCGGACGTTGGCGCGGAGCTACAGAGCAGTCCGGC
CAGGCTTCGGGTCCGAGCCTCGCAAACCAAGATGGAGTATGAGTGGAAACCTGACGAGCAAGGG
CTTCAGCAGATTCTGCAGCTGCTCAAGGAGTCCCAGTCCCCAGACACCACCATCCAGAGGACCG
TGCAACAAAAACTGGAACAACTTAATCAATATCCAGATTTTAACAACTACTTAATTTTTGTTCT
TACAAAATTAAAATCTGAAGATGAGCCCACACGGTCATTGAGCGGTCTGATCTTGAAGAACAAT
GTGAAAGCTCATTTTCAGAACTTCCCGAACGGTGTGACGGACTTCATCAAGAGTGAATGTCTAA
ATAATATTGGGGACTCCTCTCCGCTGATCAGGGCCACTGTTGGTATTTTAATTACGACCATAGC
CTCCAAGGGAGAACTGCAGAATTGGCCTGACCTCTTACCAAAACTCTGTAGCCTGCTGGATTCT
GAAGACTACAACACCTGTGAGGGGGCATTCGGTGCCCTTCAGAAGATATGTGAGGACTCCGCGG
AGATTTTAGACAGCGATGTCTTGGATCGCCCTCTCAACATCATGATCCCCAAGTTCTTACAGTT
TTTCAAGCACAGTAGTCCCAAAATAAGGTCTCACGCTGTTGCATGTGTCAATCAGTTCATCATC
AGTCGGACCCAAGCGCTCATGTTGCACATCGACTCCTTCATTGAGAACCTCTTTGCACTGGCTG
GTGACGAGGAAGCCGAGGTGCGGAAGAACGTGTGCCGAGCGCTTGTGATGCTGCTGGAAGTCCG
GATGGACCGTCTGCTGCCGCACATGCATAACATAGTCGAGTACATGCTTCAGAGGACCCAAGAC
CAAGATGAGAATGTGGCTCTGGAGGCCTGTGAATTCTGGCTGACTTTGGCTGAACAGCCAATAT
GCAAAGATGTACTTGTAAGGCATCTGCCTAAGTTGATTCCCGTGTTAGTGAATGGCATGAAGTA
CTCAGATATAGACATCATCCTGCTGAAGGGGGATGTTGAAGAAGACGAGGCCATCCCTGATAGT
GAGCAGGATATACGGCCACGGTTCCATCGCTCAAGGACGGTGGCTCAGCAGCATGAAGAGGATG
GGATTGAAGAGGATGACGACGACGACGATGAGATTGATGATGACGATACCATTTCTGACTGGAA
TCTCAGAAAGTGTTCTGCTGCTGCTCTCGATGTTCTCGCAAACGTTTATCGTGATGAGCTTTTG
CCACACATTTTGCCACTTTTGAAAGAATTGCTTTTCCATCACGAGTGGGTTGTGAAAGAGTCTG
GCATCTTGGTTTTAGGAGCAATTGCTGAAGGTTGCATGCAAGGCATGATTCCGTACCTGCCCGA
GCTCATTCCTCACCTCATTCAGTGCCTTTCTGACAAAAAGGCTCTTGTGCGTTCCATCACCTGC
TGGACTCTAAGCCGCTATGCACACTGGGTAGTCAGCCAGCCACCAGATACATACCTGAAGCCAT
TAATGACGGAATTGCTGAAGCGTATCCTGGATAGCAACAAGAGAGTACAAGAAGCTGCTTGCAG
TGCCTTTGCTACGTTAGAAGAGGAGGCTTGTACAGAGCTTGTCCCCTACCTTGCTTATATACTC
GACACCCTCGTCTTCGCCTTCAGTAAATACCAGCACAAGAACCTGCTCATTCTGTACGATGCCA
TAGGGACACTAGCAGATTCAGTGGGACATCATTTAAACAAGCCAGAATATATTCAGATGCTAAT
GCCTCCTCTGATCCAGAAGTGGAACATGTTAAAAGATGAAGACAAGGATCTTTTCCCTTTACTT
GAGTGCCTCTCATCTGTTGCCACAGCCTTGCAGTCTGGTTTCCTTCCATATTGTGAACCTGTGT
ATCAGCGTTGTGTAAACCTGGTACAGAAGACACTAGCACAAGCCATGCTAAACAATGCTCAGCC
AGAACAATATGAAGCTCCAGATAAAGACTTTATGATTGTGGCTCTTGACTTACTCAGTGGCCTG
GCTGAAGGACTGGGAGGCAACATTGAGCAGCTGGTGGCCCGAAGTAACATCCTGACACTGATGT
ATCAATGCATGCAGGATAAAATGCCCGAAGTTCGGCAGAGTTCTTTTGCATTACTAGGTGATCT
GACTAAAGCTTGCTTTCAGCACGTTAAGCCTTGTATAGCTGATTTCATGCCAATATTGGGAACC
AATCTAAATCCAGAGTTTATTTCAGTCTGCAACAACGCCACCTGGGCAATTGGGGAAATATCAA
TTCAAATGGGCATAGAGATGCAGCCTTACATCCCTATGGTGCTGCACCAGCTCGTGGAGATCAT
TAACAGACCCAACACCCCAAAGACGCTGTTGGAGAACACAGCAATAACAATTGGTCGTCTTGGT
TACGTTTGTCCTCAAGAGGTGGCCCCCATGCTACAGCAGTTTATAAGACCCTGGTGTACCTCTC
TGAGAAACATAAGAGACAATGAAGAAAAAGATTCAGCATTCCGTGGGATTTGTACCATGATCAG
TGTGAATCCTAGTGGCGTAATCCAAGATTTTATATTTTTTTGTGATGCTGTTGCATCATGGATT
AATCCCAAAGACGACCTCAGAGACATGTTCTGTAAGATCCTTCATGGATTTAAAAACCAAGTTG
GGGATGAAAATTGGAGGCGATTCTCTGACCAGTTTCCTCTTCCCTTAAAAGAGCGTCTTGCGGC
TTTTTATGGTGTTTAATCTAATACACTTAAGCTGCAGTCCCAAAACTAGGGGTCCGTCAGTCTT
GGAGACTATATGGGAGCCTCTGCACCCAGGGAAAATGTTACCCTTTACAGGGGGGAAGGGTAAA
CCAGTAGGGAATACAGTACAATCCCAACCCTACTGGGAGGGGCGGGAGGGAGGTGTTGCCGTCA
CTGTATTAAGTCGATGTTGGGAAATGTTTTAACATCTGGAGCCTTTGTGGGTGGAAATCTGTCT
CCAATTACAACTCTGCACTGGATGTGAAGAAGCAAAAACTATTCCGTCTACTCACAGAACAGTA
CTTTCTGGAATATTATGGGGAATTGTACCAAACAAGAACCACGTAAGCAATGCCTAGGGATAAG
GAGGAGGAAAAGCACATGGTCCACAACAAAGGGCACCTAAGAGTGGGAAGCTGCAACAGTAAGG
AAGCTTTTTATTAAAGGTTTTATATAAATTTTCCCACATCATGGGGCCTTGTTTTGCATGCTGA
TGAAGAGCTACTTAGAACTAACGATTAAAATCAGCTGCCTCCCCTGGTTAGACGCAGGTTCTTG
AAAGTTACAATTTAAGGTACCCCCAAAAAGTTGGAAATAAAAGGAAACAAATTTGAACAACGAA
GCACCCTGTGACATGCCGACGCGCCACTCCTTTTACCTTTGCGGGCTGGGCAGGGAGGGAGGAA
TCAATGGGGTCGGGGTCAAAGGAAAGGTGACATCTAATTTTACATTAAAACGTTAGTGGATATA
AGTTCATGGTTGTACTTCTTAGATTTAATTTCTAGGCCGACATGTTATCTAAGGTGCAGTTTAA
GGTCCAGGCATGCGCTCGGGCTCATAGTGATTGACGTGGTGTGCATTAGTGACCGCAGCATGCT
CGCCTCATAGAGTGCGGTTGGTATCCATTCACCGATGTCGCGCCAGTTTGGGTTGCCGTTTACC
AGTTCAATATAGCCCTGCATTTAAAATTCCTTTTGAGATTCGTGGATTTTATTTTTATTAAGAA
TATAGATATATAAAGTACTGTAGTTTACAACTAGGCCTTGAAATATCTTTTTAGGATCTGTTAG
GAATAAGATTGATATTGTATTGTGTGTAACCTGCACAATGTGGAAAGCTGATATACCTGTGCAA
AATCTTTGCCTCTGTGCTGTCAGTGTGGTGTGCTTTCTGCATGGTTATATGCGACTAGTAATTT
TATCAAATTTCAAATTACATGGTAAAAGATCTGTAAAAGGCTGCATAAATGTTAGTTGGCACAT
AAAGACAATTGTAGAAGTTGAAACATGATTGCTATATTTCAATGTTTATTCCCACTCAACATAT
TGCCTCTAAGCTTTCCTTTAATTTTTTTTTTTATTTTTATTTGTGTTCGAAGCATGATCTTAAA
GATATGTTTAAGTTAATGGATGTAATGCAGGGTTCCTACACTGTATTGGCGCATGTTGGTGGCC
CTCTGTGTCCTAGGCTTGTGCACATAGGGCACGTACAAAGCTACAGAGTGAGAGTTGGTTTGGA
TCCTCTTCATTTCATTTGTTTGGCTTTTCTGTTATTTTTTTCCCTCTACTTACATGTATTTCTG
TGAATAAATCCTTGTTAAGTTAACCCTTTACTTTTCCTTCCATGTGTATTTTCTTATATACTGT
GAATGTGAAGACCCTAACTGGTACACTTGATCTTATGTCCATATGAAAGTGCAAATCTTTATTA
ATTTGGATTGCCTGAGCAGTGTGTATCCCATGATGATGAAGGAAAATGGAGAGATTTTTCCTTT
TAGCTCTGCTGGTCAGAGATGAAGCCACACCTTTCCATTTTTCAATGCTGCATATTTAATCTGC
AAAAAAAGTTAAGCCATAACAGCCTTTTTCTATTTTACTTTGTCACCTTTGCATTGCAGAATAA
ATACCGAATAACCGTTTTTTATAAGCAGTCGCTCCTCTTTGCATGGTTCTGTTCTATAAAAGTG
ACTGATAACGGCCATTGCACTGAAGTGTGAGCTGTGTGTGTGTGTGTGACTTTATAAATACAAT
TTTAAAACATTTCACATGCATGGTAGCATGCACAAAGGTTTTTGTTGTCGTGTATATGTTTGTT
TTAACATGTTCTTTTACTTTTTTTCTTTTTATTTTGGCTTTGCAAATTTCAGTCTGTAGGGCCT
GAAATAAAACCATATGTAGTGCCCAGTAAGCTAGACTCGAGGGTGTCTGGTATTTTCACTTTTT
AGTAAATTACCTTACTGGAAGCTTAAAATTTGCTTCTGAGTTGGCCTTCAAAGCTAGAGTGGAA
TAGCTGTTCTAGCCTTAGGTTGTAGTGTTCCCTGCAGCGCCTCAGATACTCGGGGAAGTTAATA
TAAGAGATAGTCTTACGTAAGTAGTGAATAAGGAAACGGCCACATTGTCCAGTAATGCATAAGA
AGTGGAGGAACGTTTTCTGGACTTGTGATAAACAATTCTGTTAAGTAAAAGAGCAGTTCTATTA
CCTGTCTAATTAAGAATTTATTTCCAATTTAGCAGTTATGCAGCTCAAAAACAATATTTGGCTT
TATAGTAAATTTGTTTCTAAATCTAATAACTTTAAAATAGAAGCTTAAGTAAATATTACTTAAA
ACCTAAAACTAGGGTGGTTTTCTTTTCTAATGCAGCTTTCCCTGTTGAGGCTTTTGTTTCTTCT
TAAATTTATATTCTATTTTAGACAACATCGTATATAGCACAGGAATTTGCAGAAGCCATTTAAG
TTTTTTGAGGTCAGCGCTGAGTTAGCATTTATTGTTTTGATGAGACGTAACACATCATGGGATA
TATATATATATATATATAAAGAACTTAATTCTTGTGGTGCAGTGTTGATAGTTTTGAATGTTGC
CTAAATGTCTATGAGGTTGTGAGTTTGTCATTGTTACATTCCAGTGTTTCTGCCTCTTGGCATG
CTTAAAGCACGGCTTACTTCATCCGCTCCTTACACACTAAACTGCTCTTAGTGTGCTCAACTAC
AGAGATAGCCGCTGCTGAGTGATGTAGATTTTCTACTTGAATATTTTTATGTTGTAGGAACCTC
AGGAGGTCAGTGTTTACTGTTTTATATATGCCTTCTTTTTCCTGTTTGAGCTTCTCTCTCTGAA
GGATTCTAACAGAACAAAAGCTGCTGATCAACCTAAGTTGGAAACAGAAAGTGTGTCTAGTGTC
GTTGAAACACGTACTTAGCAGTCCCATGTCACAGCCCATTAATTAGCGAGTGAACTTAGTGCCA
CAGGTGTTCATTTACTTGGGAAATGGTTTTGCTTTTTGTATTGTCTAATCTCTTTAATGACTTC
ATACTGTGTAAGAAAAATCACTTTTGTATTGTTTGTTGGTTATTTCCAAATAACTGACTTGTAA
ATACCCTTAGAGCCAGTTCGATGCTTTACATCACTGCTACCTGATTTTGTTATGCAGCCTAGAT
CTCAGATCGCAGAACACTTAACCAAGCCATTACATCTTAAAGCAAAACAGGTAGCAACATTTTG
TAATTAACATTGATAAACACTGTGATTTTTTTGGTTAAAACTTTTTCATTGATCTGAATTGCTT
AAATTGCATATATTGTAAAATAGAGTCAGATGTATATTTTAAAATAATTTCAGCTAACTTTCCT
CTGACTGCTTTGTCTACTCAGTTATGAAATATTCAGATACAAGTTTTATCTCAGGTGAATATCC
TTGTATCATTTTGCTTTGGTGACATGTTTATAAAGAAAGATCATCATACCTTCTAGTCTGTGGG
GGTTTGTGAGGTGTTTGGTTTTTTTGTTTTGTTTTGTTTTGTTTTGTTAGAATTTAATGTGTTT
TCTCCCCAGTTAGTCAGTTTTGCCCCTCTCCAATTGTTTTATCAGACTGGAGAGAGAAATAAAA
GGCTCTCCTCACATTTGATACGGAGATTTAACTGAGAATGAGTTGAGTTTGGTCCTCTCCTTTT
CCAGACACTCAAAATACAAAAGTGGAACCTTTCTCCCTACATAAAATTCTGCAAAGTTGGGGTG
CCAGAATTAAATTATGTGTTGAACTCTTGTCTCCATTTAACACCTTTGCAGTGACTTTTTTTTG
CTTCACATAGTTAATTATATTCATATTGAATGTATTAACAGATAGAGTGCAAATGCACTCTTCC
CGAGGGAAGCGTGTGTGGTGCACAGCTGCAGCCCTGACCCCTCCTCTGGGGCTTCAGGTGCACA
CAGCCTCCTTGTGGAGCTACTTCAGCAACTGTTACACGGTGGGGGGACACTAATTGTTGCTGCT
AGTGCTGTTTAATGACGTGGTCATGGGAAGCTATAAGAAAACTGGTTAACACCCTGGGATAATT
GAGTGGCCTGTGTTGGTAAGGATTTCTCTAGTTCAGTGCCGTGCGGTAGCATTGTATATCAGCT
GGAGCATTTCATGCTGCATTAAATATGGCAGTGCTTCTAAGCCTCGTTAACGTTAAGTTTCACA
TGAAAGTTAGCTCCTCTTACCTGTGTGCTTTCTAGGTAACTGGAATCTAACTTCAGGCTTGATA
CAGATCTTCTCCCTGTTGGTATTACATATATATAGATAGATAGATAATTCTCAATGCCTAATTA
TTATACTTATACATTTGTAAGGTATAAGCATAATTGCAGCAACTGTTGTTATAGTTTGTATCCC
AGAGTTTATTGTGTTGACATAAAAGATGTGTAGCAGCAGAATGTGTGCATGACCTTGAGGGAAG
TTCAGGCTGGTTTTCTTTCCCCCCTCTGTACATTGAACAACCAAGGCAAATGTATTGCCAATCA
GAGATCACTAATTACAAAGCTCTTTTCCCTTTCAGTAGGAGCTTTTGTTTGTTATCCATTGCTG
CCGTACTGTGGCTCAGTTCTGAGGAACCCTATGTCACGGGTCTAGTCATCTTGTCAAATGCCTG
CTCTAACATGCTTAGCCTACAAGGCAGTGTTGTCTCCTCCCAATGGTCACCTCATAAAGACGTT
CCCCTCATCTTTCTGTCACTGCTCTCCTATGTGGATATATATATATAACCAGACTGATTCTTTG
GTTTTTTTATGGAGATAATAATTAGATAATACTATGTAATTAATTTTACTTGGTAGATTATCAT
CTTAAGAGATACTTAAATGTGGTAAATCACTTCATATTATGAGAGTTTTACACTTAGTATTCAT
GTTAACATTGGGTGCAATAACTTAGTAGAACCTGCTTAGTTATAAATAACTGGATCTTTCTGCT
GACAACTTAGGTTGTATGAGTTATGCTTAAAAGCTTTAAATCTGATGTTTCCTGTACCTGCCAC
ACTATGTTAGAATGTGTCCTTCAAACATATCCTGCAACTTCTCAAACTGTACTAAATTGGTAGT
TCTTGAAGTCTAACTCTGTGCTAACAGATCTTCATTTTAAATAGAATACGGTTTTAATTTTTGA
TAAGCTGCTGAATTTTAAAGAGAGTTTTTTGGGGCCACCAAATATTTTGGATCATGCAGAGAAT
ATATATTGTACTGTAGTAATTTTGTATTTACATTTGTATGATGTGACATAATAGATGTGAATGT
TAATCACTGCTTGACTATGTTAATAAAGTTGTTTAACTATA

hide sequence

RefSeq Acc Id:

XM_039102144 ⟹ XP_038958072

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	31,941,731 - 32,021,770 (-)	NCBI
mRatBN7.2	2	30,211,191 - 30,287,573 (-)	NCBI

RefSeq Acc Id:

XM_039102145 ⟹ XP_038958073

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	31,941,731 - 32,033,606 (-)	NCBI
mRatBN7.2	2	30,211,191 - 30,299,305 (-)	NCBI

RefSeq Acc Id:

XM_063281688 ⟹ XP_063137758

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	31,951,316 - 32,034,366 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001094162	(Get FASTA)	NCBI Sequence Viewer
	NP_001386360	(Get FASTA)	NCBI Sequence Viewer
	NP_001386361	(Get FASTA)	NCBI Sequence Viewer
	XP_006231902	(Get FASTA)	NCBI Sequence Viewer
	XP_008758890	(Get FASTA)	NCBI Sequence Viewer
	XP_038958072	(Get FASTA)	NCBI Sequence Viewer
	XP_038958073	(Get FASTA)	NCBI Sequence Viewer
	XP_063137758	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH90323	(Get FASTA)	NCBI Sequence Viewer
	EDM10158	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000020543
	ENSRNOP00000020543.8
	ENSRNOP00000092200
	ENSRNOP00000092200.1
	ENSRNOP00000093625
	ENSRNOP00000093625.2

RefSeq Acc Id:	NP_001094162 ⟸ NM_001100692
- Peptide Label:	isoform b
- UniProtKB:	F1LQP9 (UniProtKB/TrEMBL), A0A8I6AG33 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPT RSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPD LLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRS HAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEAEVRKNVCRALVMLLEVRMDRLLPHMHN IVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKG DVEEDEAIPDSEQDIRPRFHRSRTVAQQHEEDGIEEDDDDDDEIDDDDTISDWNLRKCSAAALD VLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLS DKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEAC TELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNML KDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPEQYEAPDKDF MIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKP CIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLL ENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDF IFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAFYGV hide sequence

RefSeq Acc Id:	XP_006231902 ⟸ XM_006231840
- Peptide Label:	isoform X1
- UniProtKB:	F1LQP9 (UniProtKB/TrEMBL), A0A8I6AG33 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPT RSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPD LLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRS HAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEAEVRKNVCRALVMLLEVRMDRLLPHMHN IVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKG DVEEDEAIPDSEQDIRPRFHRSRTVAQQHEEDGIEEDDDDDDEIDDDDTISDWNLRKCSAAALD VLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLS DKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEAC TELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNML KDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPEQYEAPDKDF MIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKP CIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLL ENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDF IFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAFYGV hide sequence

RefSeq Acc Id:	XP_008758890 ⟸ XM_008760668
- Peptide Label:	isoform X1
- UniProtKB:	F1LQP9 (UniProtKB/TrEMBL), A0A8I6AG33 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPT RSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPD LLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRS HAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEAEVRKNVCRALVMLLEVRMDRLLPHMHN IVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKG DVEEDEAIPDSEQDIRPRFHRSRTVAQQHEEDGIEEDDDDDDEIDDDDTISDWNLRKCSAAALD VLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLS DKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEAC TELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNML KDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPEQYEAPDKDF MIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKP CIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLL ENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDF IFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAFYGV hide sequence

Ensembl Acc Id:

ENSRNOP00000020543 ⟸ ENSRNOT00000020543

RefSeq Acc Id:	XP_038958073 ⟸ XM_039102145
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6AG33 (UniProtKB/TrEMBL), F1LQP9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038958072 ⟸ XM_039102144
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6AG33 (UniProtKB/TrEMBL), F1LQP9 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000092200 ⟸ ENSRNOT00000110663

Ensembl Acc Id:

ENSRNOP00000093625 ⟸ ENSRNOT00000099589

RefSeq Acc Id:	NP_001386360 ⟸ NM_001399431
- Peptide Label:	isoform a
- UniProtKB:	A0A8I6AK79 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001386361 ⟸ NM_001399432
- Peptide Label:	isoform b
- UniProtKB:	F1LQP9 (UniProtKB/TrEMBL), A0A8I6AG33 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063137758 ⟸ XM_063281688
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AK79 (UniProtKB/TrEMBL)

Protein Domains

Importin N-terminal

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-F1LQP9-F1-model_v2	AlphaFold	F1LQP9	1-890	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308372	AgrOrtholog
BioCyc Gene	G2FUF-54706	BioCyc
Ensembl Genes	ENSRNOG00000014999	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000020543	ENTREZGENE
	ENSRNOT00000020543.9	UniProtKB/TrEMBL
	ENSRNOT00000099589	ENTREZGENE
	ENSRNOT00000099589.2	UniProtKB/TrEMBL
	ENSRNOT00000110663	ENTREZGENE
	ENSRNOT00000110663.2	UniProtKB/TrEMBL
Gene3D-CATH	1.25.10.10	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7109997	IMAGE-MGC_LOAD
InterPro	ARM-like	UniProtKB/TrEMBL
	ARM-type_fold	UniProtKB/TrEMBL
	Importin-beta_N	UniProtKB/TrEMBL
	Importin_beta	UniProtKB/TrEMBL
KEGG Report	rno:309126	UniProtKB/TrEMBL
MGC_CLONE	MGC:105836	IMAGE-MGC_LOAD
NCBI Gene	309126	ENTREZGENE
PANTHER	PTHR10527	UniProtKB/TrEMBL
Pfam	HEAT_EZ	UniProtKB/TrEMBL
	IBN_N	UniProtKB/TrEMBL
PhenoGen	Tnpo1	PhenoGen
PROSITE	IMPORTIN_B_NT	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000014999	RatGTEx
SMART	IBN_N	UniProtKB/TrEMBL
Superfamily-SCOP	ARM-type_fold	UniProtKB/TrEMBL
UniProt	A0A8I6AG33	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AK79	ENTREZGENE, UniProtKB/TrEMBL
	A6I550_RAT	UniProtKB/TrEMBL
	F1LQP9	ENTREZGENE, UniProtKB/TrEMBL
	Q5D008_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-12-06	Tnpo1	transportin 1	Tnpo1_predicted	transportin 1 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Tnpo1_predicted	transportin 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message