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Gene: Abhd13 (abhydrolase domain containing 13) Rattus norvegicus

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Symbol:

Abhd13

Name:

abhydrolase domain containing 13

RGD ID:

1308317

Description:

Predicted to enable palmitoyl-(protein) hydrolase activity. Predicted to be involved in macromolecule depalmitoylation. Predicted to be located in dendrite cytoplasm. Predicted to be active in membrane. Orthologous to human ABHD13 (abhydrolase domain containing 13); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2-methoxyethanol; 3-chloropropane-1,2-diol.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

abhydrolase domain-containing protein 13; alpha/beta hydrolase domain-containing protein 13; LOC306630; RGD1308317; similar to 1110065L07Rik protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ABHD13 (abhydrolase domain containing 13)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Abhd13 (abhydrolase domain containing 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Abhd13 (abhydrolase domain containing 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ABHD13 (abhydrolase domain containing 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ABHD13 (abhydrolase domain containing 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Abhd13 (abhydrolase domain containing 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ABHD13 (abhydrolase domain containing 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ABHD13 (abhydrolase domain containing 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Abhd13 (abhydrolase domain containing 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Abhd13 (abhydrolase domain containing 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	ABHD13 (abhydrolase domain containing 13)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Abhd13 (abhydrolase domain containing 13)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	abhd13 (abhydrolase domain containing 13)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Bem46	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	YNL320W	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	abhd13	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	abhd13	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	86,203,851 - 86,218,843 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	16	86,201,794 - 86,290,906 (-)	Ensembl				GRCr8
mRatBN7.2	16	79,501,879 - 79,516,712 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	79,501,727 - 79,516,748 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	16	84,782,259 - 84,797,092 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	88,234,904 - 88,249,737 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	83,476,978 - 83,491,807 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	85,315,275 - 85,330,108 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	85,315,275 - 85,330,092 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	16	84,754,318 - 84,769,151 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	16	84,867,468 - 84,880,134 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	16	77,289,035 - 77,303,869 (-)	NCBI		Celera
RGSC_v3.1	16	84,854,781 - 84,866,034 (-)	NCBI
Cytogenetic Map	16	q12.5	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-methoxyethanol (EXP)

3,3',4,4'-tetrachlorobiphenyl (ISO)

3-chloropropane-1,2-diol (EXP)

3H-1,2-dithiole-3-thione (EXP)

aflatoxin B1 (ISO)

aflatoxin M1 (ISO)

amitrole (EXP)

antirheumatic drug (ISO)

bisphenol A (EXP,ISO)

butanal (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

CGP 52608 (ISO)

chlorpyrifos (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

flutamide (EXP)

folic acid (ISO)

irinotecan (ISO)

methylmercury chloride (ISO)

paracetamol (EXP)

perfluorooctane-1-sulfonic acid (ISO)

pirinixic acid (ISO)

SB 431542 (ISO)

testosterone (EXP)

thiram (ISO)

titanium dioxide (ISO)

trichostatin A (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

protein depalmitoylation (ISO)

Cellular Component

cytoplasm (ISO)

dendrite cytoplasm (ISO)

membrane (IEA)

plasma membrane (IBA)

Molecular Function

hydrolase activity (IEA)

palmitoyl-(protein) hydrolase activity (IBA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:19946888	PMID:27307232

Genomics

Comparative Map Data

Abhd13
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	86,203,851 - 86,218,843 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	16	86,201,794 - 86,290,906 (-)	Ensembl				GRCr8
mRatBN7.2	16	79,501,879 - 79,516,712 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	79,501,727 - 79,516,748 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	16	84,782,259 - 84,797,092 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	88,234,904 - 88,249,737 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	83,476,978 - 83,491,807 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	85,315,275 - 85,330,108 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	85,315,275 - 85,330,092 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	16	84,754,318 - 84,769,151 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	16	84,867,468 - 84,880,134 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	16	77,289,035 - 77,303,869 (-)	NCBI		Celera
RGSC_v3.1	16	84,854,781 - 84,866,034 (-)	NCBI
Cytogenetic Map	16	q12.5	NCBI

ABHD13
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	13	108,218,392 - 108,234,243 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	13	108,218,167 - 108,234,243 (+)	Ensembl			hg38	GRCh38
GRCh37	13	108,870,740 - 108,886,591 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	13	107,668,764 - 107,684,604 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	13	107,668,763 - 107,684,603	NCBI
Celera	13	89,715,507 - 89,731,348 (+)	NCBI		Celera
Cytogenetic Map	13	q33.3	NCBI
HuRef	13	89,461,668 - 89,477,511 (+)	NCBI		HuRef
CHM1_1	13	108,839,885 - 108,855,725 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	13	107,444,583 - 107,460,434 (+)	NCBI		T2T-CHM13v2.0

Abhd13
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	10,027,717 - 10,042,155 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	10,027,707 - 10,042,155 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	8	9,977,717 - 9,992,155 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	9,977,707 - 9,992,155 (+)	Ensembl			mm10	GRCm38
MGSCv37	8	9,977,717 - 9,992,155 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	8	9,977,689 - 9,992,127 (+)	NCBI		MGSCv36	mm8
Celera	8	10,153,127 - 10,167,606 (+)	NCBI		Celera
Cytogenetic Map	8	A1.1	NCBI
cM Map	8	4.53	NCBI

Abhd13
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955404	3,587,285 - 3,605,649 (-)	Ensembl
ChiLan1.0	NW_004955404	3,587,277 - 3,605,649 (-)	NCBI	ChiLan1.0	ChiLan1.0

ABHD13
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	14	109,705,227 - 109,717,624 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	13	108,385,731 - 108,401,481 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	13	89,347,452 - 89,363,329 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	13	108,485,432 - 108,501,326 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	13	108,496,283 - 108,497,296 (+)	Ensembl			panPan2	panpan1.1

ABHD13
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	22	56,989,767 - 57,010,684 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	22	57,005,559 - 57,006,671 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	22	56,761,734 - 56,782,406 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	22	57,510,512 - 57,531,203 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	22	57,510,530 - 57,531,180 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	22	57,112,534 - 57,132,294 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	22	57,099,931 - 57,120,625 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	22	57,136,953 - 57,157,656 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Abhd13
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	192,093,718 - 192,105,669 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936472	3,846,629 - 3,847,642 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936472	3,845,934 - 3,858,465 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ABHD13
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	11	75,547,747 - 75,570,263 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	11	75,547,748 - 75,569,843 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	11	82,962,603 - 82,984,700 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ABHD13
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	3	86,587,155 - 86,602,978 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	3	86,597,958 - 86,598,971 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666046	43,246,685 - 43,262,567 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Abhd13
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624793	3,681,673 - 3,695,654 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624793	3,681,673 - 3,697,495 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Abhd13
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	13	73,841,504 - 73,854,939 (-)	NCBI		Rrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	177
Count of miRNA genes:	130
Interacting mature miRNAs:	145
Transcripts:	ENSRNOT00000019563
Prediction methods:	Miranda
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2300163	Bmd64	Bone mineral density QTL 64	5.3	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	16	44455123	89455123	Rat
7411648	Foco22	Food consumption QTL 22	15	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	16	59428714	91442908	Rat
1578768	Stresp22	Stress response QTL 22	2.8		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	16	41992064	86992064	Rat
2293690	Bss45	Bone structure and strength QTL 45	5.13	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	16	44455123	89455123	Rat
8694364	Abfw7	Abdominal fat weight QTL 7	12.22	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	16	59428714	91442908	Rat
8694429	Bw164	Body weight QTL 164	5	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	16	59428714	91442908	Rat
7205510	Activ5	Activity QTL 5	3.78	0.00028	locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	16	49099196	91442908	Rat

Markers in Region

RH129326

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	79,505,281 - 79,505,468 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	85,318,678 - 85,318,864	NCBI	Rnor6.0
Rnor_5.0	16	84,757,721 - 84,757,907	UniSTS	Rnor5.0
RGSC_v3.4	16	84,868,692 - 84,868,878	UniSTS	RGSC3.4
Celera	16	77,292,438 - 77,292,624	UniSTS
RH 3.4 Map	16	768.9	UniSTS
Cytogenetic Map	16	q12.5	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001271072	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253478	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253479	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008771395	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008771396	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212188	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221944	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000019563 ⟹ ENSRNOP00000019563

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	86,203,896 - 86,214,345 (-)	Ensembl
mRatBN7.2 Ensembl	16	79,501,840 - 79,516,748 (-)	Ensembl
Rnor_6.0 Ensembl	16	85,315,275 - 85,330,092 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000096786 ⟹ ENSRNOP00000079883

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	86,203,360 - 86,290,906 (-)	Ensembl
mRatBN7.2 Ensembl	16	79,502,405 - 79,507,073 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000101631 ⟹ ENSRNOP00000084255

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	86,203,861 - 86,249,662 (-)	Ensembl
mRatBN7.2 Ensembl	16	79,501,727 - 79,516,748 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000111344 ⟹ ENSRNOP00000089757

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	86,202,609 - 86,219,802 (-)	Ensembl
mRatBN7.2 Ensembl	16	79,501,727 - 79,514,457 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000165902 ⟹ ENSRNOP00000101323

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	86,201,794 - 86,219,802 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000166757 ⟹ ENSRNOP00000106008

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	86,207,148 - 86,251,811 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000171512 ⟹ ENSRNOP00000110638

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	86,201,794 - 86,218,985 (-)	Ensembl

RefSeq Acc Id:

NM_001271072 ⟹ NP_001258001

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	86,203,851 - 86,218,684 (-)	NCBI
mRatBN7.2	16	79,501,879 - 79,516,712 (-)	NCBI
Rnor_6.0	16	85,315,275 - 85,330,108 (-)	NCBI
Rnor_5.0	16	84,754,318 - 84,769,151 (-)	NCBI
Celera	16	77,289,035 - 77,303,869 (-)	NCBI

Sequence:

show sequence

GCATGCCCAGAGGGGTGAACAGGTTGGCTTCGCGCTCCGGGAAGGAAGCCGGAGAACAGGTTAT
GTGGGGGCTGGCGGTGGCATTTGCCAGGGACACCGCACGCGAGCCGGAAGTGCAGGCTGCGCCA
GCCGCGGCGCAAGAGCTCCGGGCTAGACGGTGGCGACGGCGACCCCTCGGCGGGAGGAGGACGA
TGAGGAGCGGCGGGGGCGGCGCGGGGCCTCGCTGCTGCGCGGAGCCGGGTTCCGAGCCCGCGGC
CGACTGCGCATCCCGCCCGCGAGCCTGAGACACCTACGTGGAGCTGCCATGGAAAAACCCTGGA
TGCTGTGGAGCTTCATCGAAAGATGGCTGCTGGCCCTGGTGTCCTGGTCTTGGGCTCTCTGCCG
CATCTCTCTCTTACCTTTGATAGTGACTTTTCATCTGTATGGAGGCATTGTCTTACTGTTGTTA
ATATTCGTGTCGATTGCAGGCATCTTGTATAAATTCCAGGATGTCTTGCTCTACTTTCCAGAAC
AGCCATCGTCTTCCCGCCTTTATGTTCCCATGCCTACGGGTATTCCCCATGAAAATATTTTCAT
CAGAACCAAAGATGGCGTGCGCCTGAATCTGATCTTGGTGAGATACACTGGAGACAATTCCCCC
TATTGCCCGACAATAATTTATTTTCATGGAAATGCAGGCAACATAGGCCACAGGTTACCAAACG
CACTGCTTATGCTGGTGAACCTCAAAGTGAACCTCGTTCTTGTTGATTACCGGGGGTATGGAAA
AAGTGAAGGGGAAGCCAGTGAAGAAGGACTGTATTTGGATTCTGAAGCTGTGCTAGACTATGTG
ATGACGAGACCTGATCTCGATAAAACCAAGGTTTTCCTTTTCGGCCGCTCCCTGGGAGGAGCAG
TGGCCATTCACTTGGCTTCTGAGAATTCTCACAGAATTTCAGCCATCATGGTGGAGAACACGTT
CCTCAGCATACCACACATGGCCAGCACTCTGTTTTCATTCTTCCCAATGCGTTACCTTCCTTTA
TGGTGCTATAAAAATAAGTTTCTGTCCTACAGAAAGATCTCCCAGTGCAGGATGCCTTCTCTCT
TCATCTCTGGCCTCTCTGACCAGTTGATTCCACCTGTGATGATGAAACAGCTCTACGAGCTCTC
CCCATCCCGGACTAAGAGATTAGCCATTTTCCCAGATGGGACGCACAACGACACGTGGCAGTGC
CAAGGCTACTTCACTGCACTAGAACAGTTTATCAAGGAAGTGATCAAGAGTCATTCTCCCGAAG
ACATGACAAAAACATCATCCAATGTCACCATCATCTGATGCCACCCTCTTGATGGAGGGTGATG
GTGTCTTTTCTGGGTGTGTGTCCATACCGGTCTGCACAGTGACTCTGAGCTTTGAAAGGCCTCA
GCATTCCATTCTGACGATGCTGTAACTTTCCACATTTTCAAACTGGGCTTCTTAGAGTGTTTGA
TATCCCCATCAGAGCTCCAGCCTGGTGAACTACCCTTAACTTTGTTTAACATACCGGTTTGATA
GATGCCATCCAGAGGTTTCTTGTTGGCGAAGTGGTAAGATCTAGGTTGTACTCAGATGGAGATG
CGCACAAGAAACCTTCAGGTGTCTGTCAGTCCTTTAGTGATAGTGGGACAATCACGGGAAGCAA
GCAAGTGCTGCTGCGTTTTCACCTTAAACGTTAGGATGAAGTGCATGGCGGTGTTTATTCCTCA
CTTATGCAACGCGATATTTTCATGTAAATAGCACTGGTCACATGCCAATGTACATGGTTTCCTG
GGTTATATCTATTTTTATGTAAACTCTATTTTGTTTTGGTGAGGAATGAGTGTGAGGCCTGTGA
GCAGATTCCATGTTCTGCTGCTACTGAGATCCGGCTTTTCCTAATAATAAACAGGACCTTTTTC
CAATATAGATGTGCTGTGTTTTTGTTAGGAGCTGTCTGGAGCGTGCCTAGTGGGATAGGAAGTT
AGCATTGTACTGCAGCTTTCTTTGTATACTGAACATTTTAAACATTTGTGACTTTGGTTGCAAA
CAGAATTTTAGCCTCTGTCAGTTTGAATCTTCAGATAAACAATAACAGCCACAGCAAGGGCTAG
AACTAGCCGATAGTTGAGTGAGGGTAACTCAAGACATGTGAGCACACAGCCTTATGCAACGCTT
TCATCTGAATGAAGTCCCAGTACCTGGATGTGCCTGACCTGACAGAGGCAAGCATCATTTATTG
AACTTTTTGCAACTTTTTCAAGATGAAAGAAAAACAAAAAAGCAAATAACCAAGTATGGCTTAA
TATTCCAGTTCTGGGTAATGGACTGTATAAAGGGACAGTCTTAGGAAAATTTGTCAGTCTTTAC
TGGTGGGATTGAAGGATTCCAAAGCTTCTCTCTGCCTCTTATACAGGTAGCAATTAAGGAGCTG
TAGGTGGGAAGTTGTACTTGTCAACATGAGCCCTTTGAAGCCTGGAAACATTTGGTAACATTCC
AGTCAGGAGGTGGAACCTGCCAAGTCCTTTCCCACAGTCCTCACCAGGTAGATGGCTTGAGCCC
TTGCACATTAGGTCAGCTCCAACCCATGATTGCAGATAGCTTAGCTGTGTTTTTTGACCTTCCA
CAAGCAGCTAGAGCACAGTAATAGTCTTGACCTTTATTTAAAACTTTCCATGAACATAGGGCTA
GAAGTACTTTTGCCAAGTAGCATTCTTAGCCTTCATTTTATGCCAATGTTTAGAAAACAATAAT
GTATAGCAAGTATAATTTCTAAAGAATAATGCTTTTCTATAAATTATTAATTGTAAAGAGTCTT
GTTTTTTAAAGAGTTGGTAACTCGTCATGGAGGGTGTATTTTGTATGTGTAAATTCACCACAAT
TAAAGGCTGCTTTTCACCTTGTCAATCATTGCTGTAGAATGACGATCCTGAGTACCAGCCTGCT
GAAAGGGCAACACGTAGCAACAGCCAGAGTGTAGACCTGAGCTGTCATGGCATACTTAGTTAGT
TTTTACATTTACAGGGTACTGTATTGGAGTTCTGTTTTCATTCATTTACCAATGTGTTTTTTGG
ATCATCCACTGAAATAGGACAGCTGCTCCTTCCTTGATGTTTTCTCTGCTGCTTTCTGTTCAGC
TTTTGCTGATCGGGACCTGAGGGGTAGAAGAACGGCACTCAAGTGTACCTACCACCTTGCCCTA
CGAGAGCGAACACTTCACCTCAGCAGAGACAACTATGTTTAGGGATGTAGAACATCTCTCATTA
CCAGCTATGTATTTGATATGAGTACTTTAGATGAATAGGCATAGAAAACAAACTCATACTGTCA
GGGGCCATGATGCACCCCTGCATCATTTCTGAAAACTCATGTGGTCTCAGTGGAACATGACTAC
TGCAGGCGTCACCCCTTCACTTCAGACTCATCGTTGGTGGGGATGCCGTGGTCTGTCAACTCCT
GGCTCATTGAGAGATGGATAAATGATCTTAAGTTATGCAGCTACTATGAATTTGGAAATACAAA
AATCATCCTAAACAGGACAAGATAAACTTAGGGGAAAAAAATCTTAAACTCCATATTTTAAAGA
ATGATAGAGAGTGAGAGAAGAACTTAGTTAAAAAACAATCTTAAATTCTGTATTTTAAAGAATA
ATAGAGAACAAGACTTAGGTGACCCTTGTGCCTCATGTAAGTGTCTTAAAAGTTTTGATTGTGG
TGACACATCCATTAAATGTTACTATAAAATGGGTTACTCAACAGCTTATGTTGGCCTGAGACAC
TTATGGATGAGCTGAGACACTTAGTGTTGAGACAGATCATGGTTCTGGTGACATCACTGGAGTG
TCCCTGAAGTTTACACCTACTGATGCTTGCCCTTCTGTCAGGCTTGGCTTGGGTGGGAGTTGAC
CTGGTAGACATGTTTCACATTGGATGCATATCAGTCAGCCTGCACATCAGATATTTACATTATG
ATTCATAACAGCAAAATTATATTTAGGAAGTAGCAACAAATAATTTTATGGTTGGAGGGTCACA
ACAGACAACATGAGGAAACTGCATTAAAGGGTCACAGGCTTGGCAAGGTTGAGAACCATTGATC
TAGGCTGTCATTGACATATTTGAGCCCTCTGATTATCCCTCAAGCCTTTATCCTATCCTATCAT
GTTTGACAATTATATATTTTAAAGAGAACTGCAAAGAAAAATTAGTCATAAGTAACTCTTTTGG
AATGTCTACTTAGGTATTGTCATGTGACTCAGGTAAAGTTAGAATTGATACAGAACAGGGGTCT
ATTTTCTAGCTTGCTAGAGTAGAAAATGCAAAACTGTATTCTCATTGCATATGCACCTCCCTTC
CCCTCATCGGAAGCACTGCTGCCTTGTCTGACAGCAGGTAGGCGATCATCCTATTCTAGTCAAC
ATTTGCCAATGACACAGATATACCTCCATTTATATTTTGTATTTTAAAAAAGTAGACAAAAGAT
AGAACTGTATAACCCACACTTTTTGACAAAAAGTGCAATATAAACATTTAACAGATGTGTGTGC
AACATCATTTATGTCAATTTCTGTCAATACAAGATGTACTAAAATTCATCTTCCATATAGGAGC
ATTCAGTATGAAGTAAGTTAGTTCAGTTTCATAATCTGAGCCATAATTTTGTTGTTGCCATATT
TTCTTTGAAATAGTAATAAAATTTTATAGCTCAAATTCTAATGTCCTCTTAACTATGTGCTTAC
CCTGGCAAGGAAACATTTGTGGGGTTTTGTGGTTGGTTTTTGGTTCATTTTTCTTTCTTTCTTT
TTTTTTTTTTTTTACATTTCTCTTAAGGTATACTATCTATTTTTCTGTACTGACATGCAATAAA
TTGATACATGAACAGCTTGATTAATGTCAGATAGTTTGTATTCAGTCTTTTTAAGAATTCTATT
CATGTAAAGTCTATCTTAGGACGTTAAGTTATCTAACGGTTCAATAAAACCACGAGTTTCACTG
AAAGTAATGAATCTTATTCTAATCGTGTGGATGAAAATGTTTGCATTTCCTTTTCCCAAGAATA
TAGCAGTCCTTTGTGCATTTAGGCTGATAATCAAAAACATTTCTACATATGAACTGCTGCTGAG
TTCCTAAGCCCCAAACATCTTTTCAGTCATATGGTTGTTGTTGGACTGTCTCCTTGTCTTCAGA
CTTCATAAAATACTCTAAGAAATTTTGATGGTTGTTTTCCTCCCATTTGTGTTTTAGTTGATGA
TTCCAGATGATTAAAATAGTCTTACAGTTCACCAT

hide sequence

RefSeq Acc Id:

XM_006253478 ⟹ XP_006253540

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	86,203,855 - 86,218,843 (-)	NCBI
mRatBN7.2	16	79,501,883 - 79,516,562 (-)	NCBI
Rnor_6.0	16	85,315,279 - 85,329,909 (-)	NCBI
Rnor_5.0	16	84,754,318 - 84,769,151 (-)	NCBI

Sequence:

show sequence

CGGCGGGGGCGGCGCGGGGCCTCGCTGCTGCGCGGAGCCGGGTTCCGAGCCCGCGGCCGACTGC
GCATCCCGCCCGCGAGCCTGAGGTGAAATGTTGCCGGATAAAGAGCCTCACAGAACTTAACTGC
TCTAATTTCTTCTCTGCTGGCCTTGGCAAGACACCTACGTGGAGCTGCCATGGAAAAACCCTGG
ATGCTGTGGAGCTTCATCGAAAGATGGCTGCTGGCCCTGGTGTCCTGGTCTTGGGCTCTCTGCC
GCATCTCTCTCTTACCTTTGATAGTGACTTTTCATCTGTATGGAGGCATTGTCTTACTGTTGTT
AATATTCGTGTCGATTGCAGGCATCTTGTATAAATTCCAGGATGTCTTGCTCTACTTTCCAGAA
CAGCCATCGTCTTCCCGCCTTTATGTTCCCATGCCTACGGGTATTCCCCATGAAAATATTTTCA
TCAGAACCAAAGATGGCGTGCGCCTGAATCTGATCTTGGTGAGATACACTGGAGACAATTCCCC
CTATTGCCCGACAATAATTTATTTTCATGGAAATGCAGGCAACATAGGCCACAGGTTACCAAAC
GCACTGCTTATGCTGGTGAACCTCAAAGTGAACCTCGTTCTTGTTGATTACCGGGGGTATGGAA
AAAGTGAAGGGGAAGCCAGTGAAGAAGGACTGTATTTGGATTCTGAAGCTGTGCTAGACTATGT
GATGACGAGACCTGATCTCGATAAAACCAAGGTTTTCCTTTTCGGCCGCTCCCTGGGAGGAGCA
GTGGCCATTCACTTGGCTTCTGAGAATTCTCACAGAATTTCAGCCATCATGGTGGAGAACACGT
TCCTCAGCATACCACACATGGCCAGCACTCTGTTTTCATTCTTCCCAATGCGTTACCTTCCTTT
ATGGTGCTATAAAAATAAGTTTCTGTCCTACAGAAAGATCTCCCAGTGCAGGATGCCTTCTCTC
TTCATCTCTGGCCTCTCTGACCAGTTGATTCCACCTGTGATGATGAAACAGCTCTACGAGCTCT
CCCCATCCCGGACTAAGAGATTAGCCATTTTCCCAGATGGGACGCACAACGACACGTGGCAGTG
CCAAGGCTACTTCACTGCACTAGAACAGTTTATCAAGGAAGTGATCAAGAGTCATTCTCCCGAA
GACATGACAAAAACATCATCCAATGTCACCATCATCTGATGCCACCCTCTTGATGGAGGGTGAT
GGTGTCTTTTCTGGGTGTGTGTCCATACCGGTCTGCACAGTGACTCTGAGCTTTGAAAGGCCTC
AGCATTCCATTCTGACGATGCTGTAACTTTCCACATTTTCAAACTGGGCTTCTTAGAGTGTTTG
ATATCCCCATCAGAGCTCCAGCCTGGTGAACTACCCTTAACTTTGTTTAACATACCGGTTTGAT
AGATGCCATCCAGAGGTTTCTTGTTGGCGAAGTGGTAAGATCTAGGTTGTACTCAGATGGAGAT
GCGCACAAGAAACCTTCAGGTGTCTGTCAGTCCTTTAGTGATAGTGGGACAATCACGGGAAGCA
AGCAAGTGCTGCTGCGTTTTCACCTTAAACGTTAGGATGAAGTGCATGGCGGTGTTTATTCCTC
ACTTATGCAACGCGATATTTTCATGTAAATAGCACTGGTCACATGCCAATGTACATGGTTTCCT
GGGTTATATCTATTTTTATGTAAACTCTATTTTGTTTTGGTGAGGAATGAGTGTGAGGCCTGTG
AGCAGATTCCATGTTCTGCTGCTACTGAGATCCGGCTTTTCCTAATAATAAACAGGACCTTTTT
CCAATATAGATGTGCTGTGTTTTTGTTAGGAGCTGTCTGGAGCGTGCCTAGTGGGATAGGAAGT
TAGCATTGTACTGCAGCTTTCTTTGTATACTGAACATTTTAAACATTTGTGACTTTGGTTGCAA
ACAGAATTTTAGCCTCTGTCAGTTTGAATCTTCAGATAAACAATAACAGCCACAGCAAGGGCTA
GAACTAGCCGATAGTTGAGTGAGGGTAACTCAAGACATGTGAGCACACAGCCTTATGCAACGCT
TTCATCTGAATGAAGTCCCAGTACCTGGATGTGCCTGACCTGACAGAGGCAAGCATCATTTATT
GAACTTTTTGCAACTTTTTCAAGATGAAAGAAAAACAAAAAAGCAAATAACCAAGTATGGCTTA
ATATTCCAGTTCTGGGTAATGGACTGTATAAAGGGACAGTCTTAGGAAAATTTGTCAGTCTTTA
CTGGTGGGATTGAAGGATTCCAAAGCTTCTCTCTGCCTCTTATACAGGTAGCAATTAAGGAGCT
GTAGGTGGGAAGTTGTACTTGTCAACATGAGCCCTTTGAAGCCTGGAAACATTTGGTAACATTC
CAGTCAGGAGGTGGAACCTGCCAAGTCCTTTCCCACAGTCCTCACCAGGTAGATGGCTTGAGCC
CTTGCACATTAGGTCAGCTCCAACCCATGATTGCAGATAGCTTAGCTGTGTTTTTTGACCTTCC
ACAAGCAGCTAGAGCACAGTAATAGTCTTGACCTTTATTTAAAACTTTCCATGAACATAGGGCT
AGAAGTACTTTTGCCAAGTAGCATTCTTAGCCTTCATTTTATGCCAATGTTTAGAAAACAATAA
TGTATAGCAAGTATAATTTCTAAAGAATAATGCTTTTCTATAAATTATTAATTGTAAAGAGTCT
TGTTTTTTAAAGAGTTGGTAACTCGTCATGGAGGGTGTATTTTGTATGTGTAAATTCACCACAA
TTAAAGGCTGCTTTTCACCTTGTCAATCATTGCTGTAGAATGACGATCCTGAGTACCAGCCTGC
TGAAAGGGCAACACGTAGCAACAGCCAGAGTGTAGACCTGAGCTGTCATGGCATACTTAGTTAG
TTTTTACATTTACAGGGTACTGTATTGGAGTTCTGTTTTCATTCATTTACCAATGTGTTTTTTG
GATCATCCACTGAAATAGGACAGCTGCTCCTTCCTTGATGTTTTCTCTGCTGCTTTCTGTTCAG
CTTTTGCTGATCGGGACCTGAGGGGTAGAAGAACGGCACTCAAGTGTACCTACCACCTTGCCCT
ACGAGAGCGAACACTTCACCTCAGCAGAGACAACTATGTTTAGGGATGTAGAACATCTCTCATT
ACCAGCTATGTATTTGATATGAGTACTTTAGATGAATAGGCATAGAAAACAAACTCATACTGTC
AGGGGCCATGATGCACCCCTGCATCATTTCTGAAAACTCATGTGGTCTCAGTGGAACATGACTA
CTGCAGGCGTCACCCCTTCACTTCAGACTCATCGTTGGTGGGGATGCCGTGGTCTGTCAACTCC
TGGCTCATTGAGAGATGGATAAATGATCTTAAGTTATGCAGCTACTATGAATTTGGAAATACAA
AAATCATCCTAAACAGGACAAGATAAACTTAGGGGAAAAAAATCTTAAACTCCATATTTTAAAG
AATGATAGAGAGTGAGAGAAGAACTTAGTTAAAAAACAATCTTAAATTCTGTATTTTAAAGAAT
AATAGAGAACAAGACTTAGGTGACCCTTGTGCCTCATGTAAGTGTCTTAAAAGTTTTGATTGTG
GTGACACATCCATTAAATGTTACTATAAAATGGGTTACTCAACAGCTTATGTTGGCCTGAGACA
CTTATGGATGAGCTGAGACACTTAGTGTTGAGACAGATCATGGTTCTGGTGACATCACTGGAGT
GTCCCTGAAGTTTACACCTACTGATGCTTGCCCTTCTGTCAGGCTTGGCTTGGGTGGGAGTTGA
CCTGGTAGACATGTTTCACATTGGATGCATATCAGTCAGCCTGCACATCAGATATTTACATTAT
GATTCATAACAGCAAAATTATATTTAGGAAGTAGCAACAAATAATTTTATGGTTGGAGGGTCAC
AACAGACAACATGAGGAAACTGCATTAAAGGGTCACAGGCTTGGCAAGGTTGAGAACCATTGAT
CTAGGCTGTCATTGACATATTTGAGCCCTCTGATTATCCCTCAAGCCTTTATCCTATCCTATCA
TGTTTGACAATTATATATTTTAAAGAGAACTGCAAAGAAAAATTAGTCATAAGTAACTCTTTTG
GAATGTCTACTTAGGTATTGTCATGTGACTCAGGTAAAGTTAGAATTGATACAGAACAGGGGTC
TATTTTCTAGCTTGCTAGAGTAGAAAATGCAAAACTGTATTCTCATTGCATATGCACCTCCCTT
CCCCTCATCGGAAGCACTGCTGCCTTGTCTGACAGCAGGTAGGCGATCATCCTATTCTAGTCAA
CATTTGCCAATGACACAGATATACCTCCATTTATATTTTGTATTTTAAAAAAGTAGACAAAAGA
TAGAACTGTATAACCCACACTTTTTGACAAAAAGTGCAATATAAACATTTAACAGATGTGTGTG
CAACATCATTTATGTCAATTTCTGTCAATACAAGATGTACTAAAATTCATCTTCCATATAGGAG
CATTCAGTATGAAGTAAGTTAGTTCAGTTTCATAATCTGAGCCATAATTTTGTTGTTGCCATAT
TTTCTTTGAAATAGTAATAAAATTTTATAGCTCAAATTCTAATGTCCTCTTAACTATGTGCTTA
CCCTGGCAAGGAAACATTTGTGGGGTTTTGTGGTTGGTTTTTGGTTCATTTTTCTTTCTTTCTT
TTTTTTTTTTTTTTACATTTCTCTTAAGGTATACTATCTATTTTTCTGTACTGACATGCAATAA
ATTGATACATGAACAGCTTGATTAATGTCAGATAGTTTGTATTCAGTCTTTTTAAGAATTCTAT
TCATGTAAAGTCTATCTTAGGACGTTAAGTTATCTAACGGTTCAATAAAACCACGAGTTTCACT
GAAAGTAATGAATCTTATTCTAATCGTGTGGATGAAAATGTTTGCATTTCCTTTTCCCAAGAAT
ATAGCAGTCCTTTGTGCATTTAGGCTGATAATCAAAAACATTTCTACATATGAACTGCTGCTGA
GTTCCTAAGCCCCAAACATCTTTTCAGTCATATGGTTGTTGTTGGACTGTCTCCTTGTCTTCAG
ACTTCATAAAATACTCTAAGAAATTTTGATGGTTGTTTTCCTCCCATTTGTGTTTTAGTTGATG
ATTCCAGATGATTAAAATAGTCTTACAGTTCA

hide sequence

RefSeq Acc Id:

XM_006253479 ⟹ XP_006253541

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	86,203,855 - 86,218,843 (-)	NCBI
mRatBN7.2	16	79,501,883 - 79,516,690 (-)	NCBI
Rnor_6.0	16	85,315,279 - 85,329,818 (-)	NCBI
Rnor_5.0	16	84,754,318 - 84,769,151 (-)	NCBI

Sequence:

show sequence

GCGGCGGGGACGCGGGCCGCCTCTCCGACCTCCCCACCCCGCAGCTCGGAGCCGGGAGCCCGAG
TCTCCCTCCGTCCCTTCCCCTCCCCTGCCTGGAACAGTCGGTCAGCAAACCCCGGGCTTGGGTC
GAAGGGACGGGCGCGTTTGTCTGTAACAGGACACCTACGTGGAGCTGCCATGGAAAAACCCTGG
ATGCTGTGGAGCTTCATCGAAAGATGGCTGCTGGCCCTGGTGTCCTGGTCTTGGGCTCTCTGCC
GCATCTCTCTCTTACCTTTGATAGTGACTTTTCATCTGTATGGAGGCATTGTCTTACTGTTGTT
AATATTCGTGTCGATTGCAGGCATCTTGTATAAATTCCAGGATGTCTTGCTCTACTTTCCAGAA
CAGCCATCGTCTTCCCGCCTTTATGTTCCCATGCCTACGGGTATTCCCCATGAAAATATTTTCA
TCAGAACCAAAGATGGCGTGCGCCTGAATCTGATCTTGGTGAGATACACTGGAGACAATTCCCC
CTATTGCCCGACAATAATTTATTTTCATGGAAATGCAGGCAACATAGGCCACAGGTTACCAAAC
GCACTGCTTATGCTGGTGAACCTCAAAGTGAACCTCGTTCTTGTTGATTACCGGGGGTATGGAA
AAAGTGAAGGGGAAGCCAGTGAAGAAGGACTGTATTTGGATTCTGAAGCTGTGCTAGACTATGT
GATGACGAGACCTGATCTCGATAAAACCAAGGTTTTCCTTTTCGGCCGCTCCCTGGGAGGAGCA
GTGGCCATTCACTTGGCTTCTGAGAATTCTCACAGAATTTCAGCCATCATGGTGGAGAACACGT
TCCTCAGCATACCACACATGGCCAGCACTCTGTTTTCATTCTTCCCAATGCGTTACCTTCCTTT
ATGGTGCTATAAAAATAAGTTTCTGTCCTACAGAAAGATCTCCCAGTGCAGGATGCCTTCTCTC
TTCATCTCTGGCCTCTCTGACCAGTTGATTCCACCTGTGATGATGAAACAGCTCTACGAGCTCT
CCCCATCCCGGACTAAGAGATTAGCCATTTTCCCAGATGGGACGCACAACGACACGTGGCAGTG
CCAAGGCTACTTCACTGCACTAGAACAGTTTATCAAGGAAGTGATCAAGAGTCATTCTCCCGAA
GACATGACAAAAACATCATCCAATGTCACCATCATCTGATGCCACCCTCTTGATGGAGGGTGAT
GGTGTCTTTTCTGGGTGTGTGTCCATACCGGTCTGCACAGTGACTCTGAGCTTTGAAAGGCCTC
AGCATTCCATTCTGACGATGCTGTAACTTTCCACATTTTCAAACTGGGCTTCTTAGAGTGTTTG
ATATCCCCATCAGAGCTCCAGCCTGGTGAACTACCCTTAACTTTGTTTAACATACCGGTTTGAT
AGATGCCATCCAGAGGTTTCTTGTTGGCGAAGTGGTAAGATCTAGGTTGTACTCAGATGGAGAT
GCGCACAAGAAACCTTCAGGTGTCTGTCAGTCCTTTAGTGATAGTGGGACAATCACGGGAAGCA
AGCAAGTGCTGCTGCGTTTTCACCTTAAACGTTAGGATGAAGTGCATGGCGGTGTTTATTCCTC
ACTTATGCAACGCGATATTTTCATGTAAATAGCACTGGTCACATGCCAATGTACATGGTTTCCT
GGGTTATATCTATTTTTATGTAAACTCTATTTTGTTTTGGTGAGGAATGAGTGTGAGGCCTGTG
AGCAGATTCCATGTTCTGCTGCTACTGAGATCCGGCTTTTCCTAATAATAAACAGGACCTTTTT
CCAATATAGATGTGCTGTGTTTTTGTTAGGAGCTGTCTGGAGCGTGCCTAGTGGGATAGGAAGT
TAGCATTGTACTGCAGCTTTCTTTGTATACTGAACATTTTAAACATTTGTGACTTTGGTTGCAA
ACAGAATTTTAGCCTCTGTCAGTTTGAATCTTCAGATAAACAATAACAGCCACAGCAAGGGCTA
GAACTAGCCGATAGTTGAGTGAGGGTAACTCAAGACATGTGAGCACACAGCCTTATGCAACGCT
TTCATCTGAATGAAGTCCCAGTACCTGGATGTGCCTGACCTGACAGAGGCAAGCATCATTTATT
GAACTTTTTGCAACTTTTTCAAGATGAAAGAAAAACAAAAAAGCAAATAACCAAGTATGGCTTA
ATATTCCAGTTCTGGGTAATGGACTGTATAAAGGGACAGTCTTAGGAAAATTTGTCAGTCTTTA
CTGGTGGGATTGAAGGATTCCAAAGCTTCTCTCTGCCTCTTATACAGGTAGCAATTAAGGAGCT
GTAGGTGGGAAGTTGTACTTGTCAACATGAGCCCTTTGAAGCCTGGAAACATTTGGTAACATTC
CAGTCAGGAGGTGGAACCTGCCAAGTCCTTTCCCACAGTCCTCACCAGGTAGATGGCTTGAGCC
CTTGCACATTAGGTCAGCTCCAACCCATGATTGCAGATAGCTTAGCTGTGTTTTTTGACCTTCC
ACAAGCAGCTAGAGCACAGTAATAGTCTTGACCTTTATTTAAAACTTTCCATGAACATAGGGCT
AGAAGTACTTTTGCCAAGTAGCATTCTTAGCCTTCATTTTATGCCAATGTTTAGAAAACAATAA
TGTATAGCAAGTATAATTTCTAAAGAATAATGCTTTTCTATAAATTATTAATTGTAAAGAGTCT
TGTTTTTTAAAGAGTTGGTAACTCGTCATGGAGGGTGTATTTTGTATGTGTAAATTCACCACAA
TTAAAGGCTGCTTTTCACCTTGTCAATCATTGCTGTAGAATGACGATCCTGAGTACCAGCCTGC
TGAAAGGGCAACACGTAGCAACAGCCAGAGTGTAGACCTGAGCTGTCATGGCATACTTAGTTAG
TTTTTACATTTACAGGGTACTGTATTGGAGTTCTGTTTTCATTCATTTACCAATGTGTTTTTTG
GATCATCCACTGAAATAGGACAGCTGCTCCTTCCTTGATGTTTTCTCTGCTGCTTTCTGTTCAG
CTTTTGCTGATCGGGACCTGAGGGGTAGAAGAACGGCACTCAAGTGTACCTACCACCTTGCCCT
ACGAGAGCGAACACTTCACCTCAGCAGAGACAACTATGTTTAGGGATGTAGAACATCTCTCATT
ACCAGCTATGTATTTGATATGAGTACTTTAGATGAATAGGCATAGAAAACAAACTCATACTGTC
AGGGGCCATGATGCACCCCTGCATCATTTCTGAAAACTCATGTGGTCTCAGTGGAACATGACTA
CTGCAGGCGTCACCCCTTCACTTCAGACTCATCGTTGGTGGGGATGCCGTGGTCTGTCAACTCC
TGGCTCATTGAGAGATGGATAAATGATCTTAAGTTATGCAGCTACTATGAATTTGGAAATACAA
AAATCATCCTAAACAGGACAAGATAAACTTAGGGGAAAAAAATCTTAAACTCCATATTTTAAAG
AATGATAGAGAGTGAGAGAAGAACTTAGTTAAAAAACAATCTTAAATTCTGTATTTTAAAGAAT
AATAGAGAACAAGACTTAGGTGACCCTTGTGCCTCATGTAAGTGTCTTAAAAGTTTTGATTGTG
GTGACACATCCATTAAATGTTACTATAAAATGGGTTACTCAACAGCTTATGTTGGCCTGAGACA
CTTATGGATGAGCTGAGACACTTAGTGTTGAGACAGATCATGGTTCTGGTGACATCACTGGAGT
GTCCCTGAAGTTTACACCTACTGATGCTTGCCCTTCTGTCAGGCTTGGCTTGGGTGGGAGTTGA
CCTGGTAGACATGTTTCACATTGGATGCATATCAGTCAGCCTGCACATCAGATATTTACATTAT
GATTCATAACAGCAAAATTATATTTAGGAAGTAGCAACAAATAATTTTATGGTTGGAGGGTCAC
AACAGACAACATGAGGAAACTGCATTAAAGGGTCACAGGCTTGGCAAGGTTGAGAACCATTGAT
CTAGGCTGTCATTGACATATTTGAGCCCTCTGATTATCCCTCAAGCCTTTATCCTATCCTATCA
TGTTTGACAATTATATATTTTAAAGAGAACTGCAAAGAAAAATTAGTCATAAGTAACTCTTTTG
GAATGTCTACTTAGGTATTGTCATGTGACTCAGGTAAAGTTAGAATTGATACAGAACAGGGGTC
TATTTTCTAGCTTGCTAGAGTAGAAAATGCAAAACTGTATTCTCATTGCATATGCACCTCCCTT
CCCCTCATCGGAAGCACTGCTGCCTTGTCTGACAGCAGGTAGGCGATCATCCTATTCTAGTCAA
CATTTGCCAATGACACAGATATACCTCCATTTATATTTTGTATTTTAAAAAAGTAGACAAAAGA
TAGAACTGTATAACCCACACTTTTTGACAAAAAGTGCAATATAAACATTTAACAGATGTGTGTG
CAACATCATTTATGTCAATTTCTGTCAATACAAGATGTACTAAAATTCATCTTCCATATAGGAG
CATTCAGTATGAAGTAAGTTAGTTCAGTTTCATAATCTGAGCCATAATTTTGTTGTTGCCATAT
TTTCTTTGAAATAGTAATAAAATTTTATAGCTCAAATTCTAATGTCCTCTTAACTATGTGCTTA
CCCTGGCAAGGAAACATTTGTGGGGTTTTGTGGTTGGTTTTTGGTTCATTTTTCTTTCTTTCTT
TTTTTTTTTTTTTTACATTTCTCTTAAGGTATACTATCTATTTTTCTGTACTGACATGCAATAA
ATTGATACATGAACAGCTTGATTAATGTCAGATAGTTTGTATTCAGTCTTTTTAAGAATTCTAT
TCATGTAAAGTCTATCTTAGGACGTTAAGTTATCTAACGGTTCAATAAAACCACGAGTTTCACT
GAAAGTAATGAATCTTATTCTAATCGTGTGGATGAAAATGTTTGCATTTCCTTTTCCCAAGAAT
ATAGCAGTCCTTTGTGCATTTAGGCTGATAATCAAAAACATTTCTACATATGAACTGCTGCTGA
GTTCCTAAGCCCCAAACATCTTTTCAGTCATATGGTTGTTGTTGGACTGTCTCCTTGTCTTCAG
ACTTCATAAAATACTCTAAGAAATTTTGATGGTTGTTTTCCTCCCATTTGTGTTTTAGTTGATG
ATTCCAGATGATTAAAATAGTCTTACAGTTCA

hide sequence

RefSeq Acc Id:

XM_008771395 ⟹ XP_008769617

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	86,203,855 - 86,218,843 (-)	NCBI
mRatBN7.2	16	79,501,883 - 79,516,690 (-)	NCBI
Rnor_6.0	16	85,315,279 - 85,329,818 (-)	NCBI

Sequence:

show sequence

GCGGCGGGGACGCGGGCCGCCTCTCCGACCTCCCCACCCCGCAGCTCGGAGCCGGGAGCCCGAG
TCTCCCTCCGTCCCTTCCCCTCCCCTGCCTGGAACAGTCGGTCAGCAAACCCCGGGCTTGGGTC
GAAGGGACGGGCGCGTTTGTCTGTAACAGGGTGAAATGTTGCCGGATAAAGAGCCTCACAGAAC
TTAACTGCTCTAATTTCTTCTCTGCTGGCCTTGGCAAGACACCTACGTGGAGCTGCCATGGAAA
AACCCTGGATGCTGTGGAGCTTCATCGAAAGATGGCTGCTGGCCCTGGTGTCCTGGTCTTGGGC
TCTCTGCCGCATCTCTCTCTTACCTTTGATAGTGACTTTTCATCTGTATGGAGGCATTGTCTTA
CTGTTGTTAATATTCGTGTCGATTGCAGGCATCTTGTATAAATTCCAGGATGTCTTGCTCTACT
TTCCAGAACAGCCATCGTCTTCCCGCCTTTATGTTCCCATGCCTACGGGTATTCCCCATGAAAA
TATTTTCATCAGAACCAAAGATGGCGTGCGCCTGAATCTGATCTTGGTGAGATACACTGGAGAC
AATTCCCCCTATTGCCCGACAATAATTTATTTTCATGGAAATGCAGGCAACATAGGCCACAGGT
TACCAAACGCACTGCTTATGCTGGTGAACCTCAAAGTGAACCTCGTTCTTGTTGATTACCGGGG
GTATGGAAAAAGTGAAGGGGAAGCCAGTGAAGAAGGACTGTATTTGGATTCTGAAGCTGTGCTA
GACTATGTGATGACGAGACCTGATCTCGATAAAACCAAGGTTTTCCTTTTCGGCCGCTCCCTGG
GAGGAGCAGTGGCCATTCACTTGGCTTCTGAGAATTCTCACAGAATTTCAGCCATCATGGTGGA
GAACACGTTCCTCAGCATACCACACATGGCCAGCACTCTGTTTTCATTCTTCCCAATGCGTTAC
CTTCCTTTATGGTGCTATAAAAATAAGTTTCTGTCCTACAGAAAGATCTCCCAGTGCAGGATGC
CTTCTCTCTTCATCTCTGGCCTCTCTGACCAGTTGATTCCACCTGTGATGATGAAACAGCTCTA
CGAGCTCTCCCCATCCCGGACTAAGAGATTAGCCATTTTCCCAGATGGGACGCACAACGACACG
TGGCAGTGCCAAGGCTACTTCACTGCACTAGAACAGTTTATCAAGGAAGTGATCAAGAGTCATT
CTCCCGAAGACATGACAAAAACATCATCCAATGTCACCATCATCTGATGCCACCCTCTTGATGG
AGGGTGATGGTGTCTTTTCTGGGTGTGTGTCCATACCGGTCTGCACAGTGACTCTGAGCTTTGA
AAGGCCTCAGCATTCCATTCTGACGATGCTGTAACTTTCCACATTTTCAAACTGGGCTTCTTAG
AGTGTTTGATATCCCCATCAGAGCTCCAGCCTGGTGAACTACCCTTAACTTTGTTTAACATACC
GGTTTGATAGATGCCATCCAGAGGTTTCTTGTTGGCGAAGTGGTAAGATCTAGGTTGTACTCAG
ATGGAGATGCGCACAAGAAACCTTCAGGTGTCTGTCAGTCCTTTAGTGATAGTGGGACAATCAC
GGGAAGCAAGCAAGTGCTGCTGCGTTTTCACCTTAAACGTTAGGATGAAGTGCATGGCGGTGTT
TATTCCTCACTTATGCAACGCGATATTTTCATGTAAATAGCACTGGTCACATGCCAATGTACAT
GGTTTCCTGGGTTATATCTATTTTTATGTAAACTCTATTTTGTTTTGGTGAGGAATGAGTGTGA
GGCCTGTGAGCAGATTCCATGTTCTGCTGCTACTGAGATCCGGCTTTTCCTAATAATAAACAGG
ACCTTTTTCCAATATAGATGTGCTGTGTTTTTGTTAGGAGCTGTCTGGAGCGTGCCTAGTGGGA
TAGGAAGTTAGCATTGTACTGCAGCTTTCTTTGTATACTGAACATTTTAAACATTTGTGACTTT
GGTTGCAAACAGAATTTTAGCCTCTGTCAGTTTGAATCTTCAGATAAACAATAACAGCCACAGC
AAGGGCTAGAACTAGCCGATAGTTGAGTGAGGGTAACTCAAGACATGTGAGCACACAGCCTTAT
GCAACGCTTTCATCTGAATGAAGTCCCAGTACCTGGATGTGCCTGACCTGACAGAGGCAAGCAT
CATTTATTGAACTTTTTGCAACTTTTTCAAGATGAAAGAAAAACAAAAAAGCAAATAACCAAGT
ATGGCTTAATATTCCAGTTCTGGGTAATGGACTGTATAAAGGGACAGTCTTAGGAAAATTTGTC
AGTCTTTACTGGTGGGATTGAAGGATTCCAAAGCTTCTCTCTGCCTCTTATACAGGTAGCAATT
AAGGAGCTGTAGGTGGGAAGTTGTACTTGTCAACATGAGCCCTTTGAAGCCTGGAAACATTTGG
TAACATTCCAGTCAGGAGGTGGAACCTGCCAAGTCCTTTCCCACAGTCCTCACCAGGTAGATGG
CTTGAGCCCTTGCACATTAGGTCAGCTCCAACCCATGATTGCAGATAGCTTAGCTGTGTTTTTT
GACCTTCCACAAGCAGCTAGAGCACAGTAATAGTCTTGACCTTTATTTAAAACTTTCCATGAAC
ATAGGGCTAGAAGTACTTTTGCCAAGTAGCATTCTTAGCCTTCATTTTATGCCAATGTTTAGAA
AACAATAATGTATAGCAAGTATAATTTCTAAAGAATAATGCTTTTCTATAAATTATTAATTGTA
AAGAGTCTTGTTTTTTAAAGAGTTGGTAACTCGTCATGGAGGGTGTATTTTGTATGTGTAAATT
CACCACAATTAAAGGCTGCTTTTCACCTTGTCAATCATTGCTGTAGAATGACGATCCTGAGTAC
CAGCCTGCTGAAAGGGCAACACGTAGCAACAGCCAGAGTGTAGACCTGAGCTGTCATGGCATAC
TTAGTTAGTTTTTACATTTACAGGGTACTGTATTGGAGTTCTGTTTTCATTCATTTACCAATGT
GTTTTTTGGATCATCCACTGAAATAGGACAGCTGCTCCTTCCTTGATGTTTTCTCTGCTGCTTT
CTGTTCAGCTTTTGCTGATCGGGACCTGAGGGGTAGAAGAACGGCACTCAAGTGTACCTACCAC
CTTGCCCTACGAGAGCGAACACTTCACCTCAGCAGAGACAACTATGTTTAGGGATGTAGAACAT
CTCTCATTACCAGCTATGTATTTGATATGAGTACTTTAGATGAATAGGCATAGAAAACAAACTC
ATACTGTCAGGGGCCATGATGCACCCCTGCATCATTTCTGAAAACTCATGTGGTCTCAGTGGAA
CATGACTACTGCAGGCGTCACCCCTTCACTTCAGACTCATCGTTGGTGGGGATGCCGTGGTCTG
TCAACTCCTGGCTCATTGAGAGATGGATAAATGATCTTAAGTTATGCAGCTACTATGAATTTGG
AAATACAAAAATCATCCTAAACAGGACAAGATAAACTTAGGGGAAAAAAATCTTAAACTCCATA
TTTTAAAGAATGATAGAGAGTGAGAGAAGAACTTAGTTAAAAAACAATCTTAAATTCTGTATTT
TAAAGAATAATAGAGAACAAGACTTAGGTGACCCTTGTGCCTCATGTAAGTGTCTTAAAAGTTT
TGATTGTGGTGACACATCCATTAAATGTTACTATAAAATGGGTTACTCAACAGCTTATGTTGGC
CTGAGACACTTATGGATGAGCTGAGACACTTAGTGTTGAGACAGATCATGGTTCTGGTGACATC
ACTGGAGTGTCCCTGAAGTTTACACCTACTGATGCTTGCCCTTCTGTCAGGCTTGGCTTGGGTG
GGAGTTGACCTGGTAGACATGTTTCACATTGGATGCATATCAGTCAGCCTGCACATCAGATATT
TACATTATGATTCATAACAGCAAAATTATATTTAGGAAGTAGCAACAAATAATTTTATGGTTGG
AGGGTCACAACAGACAACATGAGGAAACTGCATTAAAGGGTCACAGGCTTGGCAAGGTTGAGAA
CCATTGATCTAGGCTGTCATTGACATATTTGAGCCCTCTGATTATCCCTCAAGCCTTTATCCTA
TCCTATCATGTTTGACAATTATATATTTTAAAGAGAACTGCAAAGAAAAATTAGTCATAAGTAA
CTCTTTTGGAATGTCTACTTAGGTATTGTCATGTGACTCAGGTAAAGTTAGAATTGATACAGAA
CAGGGGTCTATTTTCTAGCTTGCTAGAGTAGAAAATGCAAAACTGTATTCTCATTGCATATGCA
CCTCCCTTCCCCTCATCGGAAGCACTGCTGCCTTGTCTGACAGCAGGTAGGCGATCATCCTATT
CTAGTCAACATTTGCCAATGACACAGATATACCTCCATTTATATTTTGTATTTTAAAAAAGTAG
ACAAAAGATAGAACTGTATAACCCACACTTTTTGACAAAAAGTGCAATATAAACATTTAACAGA
TGTGTGTGCAACATCATTTATGTCAATTTCTGTCAATACAAGATGTACTAAAATTCATCTTCCA
TATAGGAGCATTCAGTATGAAGTAAGTTAGTTCAGTTTCATAATCTGAGCCATAATTTTGTTGT
TGCCATATTTTCTTTGAAATAGTAATAAAATTTTATAGCTCAAATTCTAATGTCCTCTTAACTA
TGTGCTTACCCTGGCAAGGAAACATTTGTGGGGTTTTGTGGTTGGTTTTTGGTTCATTTTTCTT
TCTTTCTTTTTTTTTTTTTTTTACATTTCTCTTAAGGTATACTATCTATTTTTCTGTACTGACA
TGCAATAAATTGATACATGAACAGCTTGATTAATGTCAGATAGTTTGTATTCAGTCTTTTTAAG
AATTCTATTCATGTAAAGTCTATCTTAGGACGTTAAGTTATCTAACGGTTCAATAAAACCACGA
GTTTCACTGAAAGTAATGAATCTTATTCTAATCGTGTGGATGAAAATGTTTGCATTTCCTTTTC
CCAAGAATATAGCAGTCCTTTGTGCATTTAGGCTGATAATCAAAAACATTTCTACATATGAACT
GCTGCTGAGTTCCTAAGCCCCAAACATCTTTTCAGTCATATGGTTGTTGTTGGACTGTCTCCTT
GTCTTCAGACTTCATAAAATACTCTAAGAAATTTTGATGGTTGTTTTCCTCCCATTTGTGTTTT
AGTTGATGATTCCAGATGATTAAAATAGTCTTACAGTTCA

hide sequence

RefSeq Acc Id:

XM_008771396 ⟹ XP_008769618

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	86,203,855 - 86,218,843 (-)	NCBI
mRatBN7.2	16	79,501,883 - 79,516,453 (-)	NCBI
Rnor_6.0	16	85,315,279 - 85,329,818 (-)	NCBI

Sequence:

show sequence

GCGGCGGGGACGCGGGCCGCCTCTCCGACCTCCCCACCCCGCAGCTCGGAGCCGGGAGCCCGAG
TCTCCCTCCGTCCCTTCCCCTCCCCTGCCTGGAACAGTCGGACACCTACGTGGAGCTGCCATGG
AAAAACCCTGGATGCTGTGGAGCTTCATCGAAAGATGGCTGCTGGCCCTGGTGTCCTGGTCTTG
GGCTCTCTGCCGCATCTCTCTCTTACCTTTGATAGTGACTTTTCATCTGTATGGAGGCATTGTC
TTACTGTTGTTAATATTCGTGTCGATTGCAGGCATCTTGTATAAATTCCAGGATGTCTTGCTCT
ACTTTCCAGAACAGCCATCGTCTTCCCGCCTTTATGTTCCCATGCCTACGGGTATTCCCCATGA
AAATATTTTCATCAGAACCAAAGATGGCGTGCGCCTGAATCTGATCTTGGTGAGATACACTGGA
GACAATTCCCCCTATTGCCCGACAATAATTTATTTTCATGGAAATGCAGGCAACATAGGCCACA
GGTTACCAAACGCACTGCTTATGCTGGTGAACCTCAAAGTGAACCTCGTTCTTGTTGATTACCG
GGGGTATGGAAAAAGTGAAGGGGAAGCCAGTGAAGAAGGACTGTATTTGGATTCTGAAGCTGTG
CTAGACTATGTGATGACGAGACCTGATCTCGATAAAACCAAGGTTTTCCTTTTCGGCCGCTCCC
TGGGAGGAGCAGTGGCCATTCACTTGGCTTCTGAGAATTCTCACAGAATTTCAGCCATCATGGT
GGAGAACACGTTCCTCAGCATACCACACATGGCCAGCACTCTGTTTTCATTCTTCCCAATGCGT
TACCTTCCTTTATGGTGCTATAAAAATAAGTTTCTGTCCTACAGAAAGATCTCCCAGTGCAGGA
TGCCTTCTCTCTTCATCTCTGGCCTCTCTGACCAGTTGATTCCACCTGTGATGATGAAACAGCT
CTACGAGCTCTCCCCATCCCGGACTAAGAGATTAGCCATTTTCCCAGATGGGACGCACAACGAC
ACGTGGCAGTGCCAAGGCTACTTCACTGCACTAGAACAGTTTATCAAGGAAGTGATCAAGAGTC
ATTCTCCCGAAGACATGACAAAAACATCATCCAATGTCACCATCATCTGATGCCACCCTCTTGA
TGGAGGGTGATGGTGTCTTTTCTGGGTGTGTGTCCATACCGGTCTGCACAGTGACTCTGAGCTT
TGAAAGGCCTCAGCATTCCATTCTGACGATGCTGTAACTTTCCACATTTTCAAACTGGGCTTCT
TAGAGTGTTTGATATCCCCATCAGAGCTCCAGCCTGGTGAACTACCCTTAACTTTGTTTAACAT
ACCGGTTTGATAGATGCCATCCAGAGGTTTCTTGTTGGCGAAGTGGTAAGATCTAGGTTGTACT
CAGATGGAGATGCGCACAAGAAACCTTCAGGTGTCTGTCAGTCCTTTAGTGATAGTGGGACAAT
CACGGGAAGCAAGCAAGTGCTGCTGCGTTTTCACCTTAAACGTTAGGATGAAGTGCATGGCGGT
GTTTATTCCTCACTTATGCAACGCGATATTTTCATGTAAATAGCACTGGTCACATGCCAATGTA
CATGGTTTCCTGGGTTATATCTATTTTTATGTAAACTCTATTTTGTTTTGGTGAGGAATGAGTG
TGAGGCCTGTGAGCAGATTCCATGTTCTGCTGCTACTGAGATCCGGCTTTTCCTAATAATAAAC
AGGACCTTTTTCCAATATAGATGTGCTGTGTTTTTGTTAGGAGCTGTCTGGAGCGTGCCTAGTG
GGATAGGAAGTTAGCATTGTACTGCAGCTTTCTTTGTATACTGAACATTTTAAACATTTGTGAC
TTTGGTTGCAAACAGAATTTTAGCCTCTGTCAGTTTGAATCTTCAGATAAACAATAACAGCCAC
AGCAAGGGCTAGAACTAGCCGATAGTTGAGTGAGGGTAACTCAAGACATGTGAGCACACAGCCT
TATGCAACGCTTTCATCTGAATGAAGTCCCAGTACCTGGATGTGCCTGACCTGACAGAGGCAAG
CATCATTTATTGAACTTTTTGCAACTTTTTCAAGATGAAAGAAAAACAAAAAAGCAAATAACCA
AGTATGGCTTAATATTCCAGTTCTGGGTAATGGACTGTATAAAGGGACAGTCTTAGGAAAATTT
GTCAGTCTTTACTGGTGGGATTGAAGGATTCCAAAGCTTCTCTCTGCCTCTTATACAGGTAGCA
ATTAAGGAGCTGTAGGTGGGAAGTTGTACTTGTCAACATGAGCCCTTTGAAGCCTGGAAACATT
TGGTAACATTCCAGTCAGGAGGTGGAACCTGCCAAGTCCTTTCCCACAGTCCTCACCAGGTAGA
TGGCTTGAGCCCTTGCACATTAGGTCAGCTCCAACCCATGATTGCAGATAGCTTAGCTGTGTTT
TTTGACCTTCCACAAGCAGCTAGAGCACAGTAATAGTCTTGACCTTTATTTAAAACTTTCCATG
AACATAGGGCTAGAAGTACTTTTGCCAAGTAGCATTCTTAGCCTTCATTTTATGCCAATGTTTA
GAAAACAATAATGTATAGCAAGTATAATTTCTAAAGAATAATGCTTTTCTATAAATTATTAATT
GTAAAGAGTCTTGTTTTTTAAAGAGTTGGTAACTCGTCATGGAGGGTGTATTTTGTATGTGTAA
ATTCACCACAATTAAAGGCTGCTTTTCACCTTGTCAATCATTGCTGTAGAATGACGATCCTGAG
TACCAGCCTGCTGAAAGGGCAACACGTAGCAACAGCCAGAGTGTAGACCTGAGCTGTCATGGCA
TACTTAGTTAGTTTTTACATTTACAGGGTACTGTATTGGAGTTCTGTTTTCATTCATTTACCAA
TGTGTTTTTTGGATCATCCACTGAAATAGGACAGCTGCTCCTTCCTTGATGTTTTCTCTGCTGC
TTTCTGTTCAGCTTTTGCTGATCGGGACCTGAGGGGTAGAAGAACGGCACTCAAGTGTACCTAC
CACCTTGCCCTACGAGAGCGAACACTTCACCTCAGCAGAGACAACTATGTTTAGGGATGTAGAA
CATCTCTCATTACCAGCTATGTATTTGATATGAGTACTTTAGATGAATAGGCATAGAAAACAAA
CTCATACTGTCAGGGGCCATGATGCACCCCTGCATCATTTCTGAAAACTCATGTGGTCTCAGTG
GAACATGACTACTGCAGGCGTCACCCCTTCACTTCAGACTCATCGTTGGTGGGGATGCCGTGGT
CTGTCAACTCCTGGCTCATTGAGAGATGGATAAATGATCTTAAGTTATGCAGCTACTATGAATT
TGGAAATACAAAAATCATCCTAAACAGGACAAGATAAACTTAGGGGAAAAAAATCTTAAACTCC
ATATTTTAAAGAATGATAGAGAGTGAGAGAAGAACTTAGTTAAAAAACAATCTTAAATTCTGTA
TTTTAAAGAATAATAGAGAACAAGACTTAGGTGACCCTTGTGCCTCATGTAAGTGTCTTAAAAG
TTTTGATTGTGGTGACACATCCATTAAATGTTACTATAAAATGGGTTACTCAACAGCTTATGTT
GGCCTGAGACACTTATGGATGAGCTGAGACACTTAGTGTTGAGACAGATCATGGTTCTGGTGAC
ATCACTGGAGTGTCCCTGAAGTTTACACCTACTGATGCTTGCCCTTCTGTCAGGCTTGGCTTGG
GTGGGAGTTGACCTGGTAGACATGTTTCACATTGGATGCATATCAGTCAGCCTGCACATCAGAT
ATTTACATTATGATTCATAACAGCAAAATTATATTTAGGAAGTAGCAACAAATAATTTTATGGT
TGGAGGGTCACAACAGACAACATGAGGAAACTGCATTAAAGGGTCACAGGCTTGGCAAGGTTGA
GAACCATTGATCTAGGCTGTCATTGACATATTTGAGCCCTCTGATTATCCCTCAAGCCTTTATC
CTATCCTATCATGTTTGACAATTATATATTTTAAAGAGAACTGCAAAGAAAAATTAGTCATAAG
TAACTCTTTTGGAATGTCTACTTAGGTATTGTCATGTGACTCAGGTAAAGTTAGAATTGATACA
GAACAGGGGTCTATTTTCTAGCTTGCTAGAGTAGAAAATGCAAAACTGTATTCTCATTGCATAT
GCACCTCCCTTCCCCTCATCGGAAGCACTGCTGCCTTGTCTGACAGCAGGTAGGCGATCATCCT
ATTCTAGTCAACATTTGCCAATGACACAGATATACCTCCATTTATATTTTGTATTTTAAAAAAG
TAGACAAAAGATAGAACTGTATAACCCACACTTTTTGACAAAAAGTGCAATATAAACATTTAAC
AGATGTGTGTGCAACATCATTTATGTCAATTTCTGTCAATACAAGATGTACTAAAATTCATCTT
CCATATAGGAGCATTCAGTATGAAGTAAGTTAGTTCAGTTTCATAATCTGAGCCATAATTTTGT
TGTTGCCATATTTTCTTTGAAATAGTAATAAAATTTTATAGCTCAAATTCTAATGTCCTCTTAA
CTATGTGCTTACCCTGGCAAGGAAACATTTGTGGGGTTTTGTGGTTGGTTTTTGGTTCATTTTT
CTTTCTTTCTTTTTTTTTTTTTTTTACATTTCTCTTAAGGTATACTATCTATTTTTCTGTACTG
ACATGCAATAAATTGATACATGAACAGCTTGATTAATGTCAGATAGTTTGTATTCAGTCTTTTT
AAGAATTCTATTCATGTAAAGTCTATCTTAGGACGTTAAGTTATCTAACGGTTCAATAAAACCA
CGAGTTTCACTGAAAGTAATGAATCTTATTCTAATCGTGTGGATGAAAATGTTTGCATTTCCTT
TTCCCAAGAATATAGCAGTCCTTTGTGCATTTAGGCTGATAATCAAAAACATTTCTACATATGA
ACTGCTGCTGAGTTCCTAAGCCCCAAACATCTTTTCAGTCATATGGTTGTTGTTGGACTGTCTC
CTTGTCTTCAGACTTCATAAAATACTCTAAGAAATTTTGATGGTTGTTTTCCTCCCATTTGTGT
TTTAGTTGATGATTCCAGATGATTAAAATAGTCTTACAGTTCA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001258001	(Get FASTA)	NCBI Sequence Viewer
	XP_006253540	(Get FASTA)	NCBI Sequence Viewer
	XP_006253541	(Get FASTA)	NCBI Sequence Viewer
	XP_008769617	(Get FASTA)	NCBI Sequence Viewer
	XP_008769618	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM08801	(Get FASTA)	NCBI Sequence Viewer
	EDM08802	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000019563.5
	ENSRNOP00000079883.1
	ENSRNOP00000084255.1
	ENSRNOP00000089757.1
	ENSRNOP00000101323
	ENSRNOP00000101323.1
	ENSRNOP00000106008.1
	ENSRNOP00000110638
	ENSRNOP00000110638.1

RefSeq Acc Id:

NP_001258001 ⟸ NM_001271072

- UniProtKB:

D4A1B6 (UniProtKB/TrEMBL), A6IWS1 (UniProtKB/TrEMBL), A6IWS0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEKPWMLWSFIERWLLALVSWSWALCRISLLPLIVTFHLYGGIVLLLLIFVSIAGILYKFQDVL
LYFPEQPSSSRLYVPMPTGIPHENIFIRTKDGVRLNLILVRYTGDNSPYCPTIIYFHGNAGNIG
HRLPNALLMLVNLKVNLVLVDYRGYGKSEGEASEEGLYLDSEAVLDYVMTRPDLDKTKVFLFGR
SLGGAVAIHLASENSHRISAIMVENTFLSIPHMASTLFSFFPMRYLPLWCYKNKFLSYRKISQC
RMPSLFISGLSDQLIPPVMMKQLYELSPSRTKRLAIFPDGTHNDTWQCQGYFTALEQFIKEVIK
SHSPEDMTKTSSNVTII

hide sequence

RefSeq Acc Id:	XP_006253541 ⟸ XM_006253479
- Peptide Label:	isoform X1
- UniProtKB:	D4A1B6 (UniProtKB/TrEMBL), A6IWS1 (UniProtKB/TrEMBL), A6IWS0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEKPWMLWSFIERWLLALVSWSWALCRISLLPLIVTFHLYGGIVLLLLIFVSIAGILYKFQDVL LYFPEQPSSSRLYVPMPTGIPHENIFIRTKDGVRLNLILVRYTGDNSPYCPTIIYFHGNAGNIG HRLPNALLMLVNLKVNLVLVDYRGYGKSEGEASEEGLYLDSEAVLDYVMTRPDLDKTKVFLFGR SLGGAVAIHLASENSHRISAIMVENTFLSIPHMASTLFSFFPMRYLPLWCYKNKFLSYRKISQC RMPSLFISGLSDQLIPPVMMKQLYELSPSRTKRLAIFPDGTHNDTWQCQGYFTALEQFIKEVIK SHSPEDMTKTSSNVTII hide sequence

RefSeq Acc Id:	XP_006253540 ⟸ XM_006253478
- Peptide Label:	isoform X1
- UniProtKB:	D4A1B6 (UniProtKB/TrEMBL), A6IWS1 (UniProtKB/TrEMBL), A6IWS0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEKPWMLWSFIERWLLALVSWSWALCRISLLPLIVTFHLYGGIVLLLLIFVSIAGILYKFQDVL LYFPEQPSSSRLYVPMPTGIPHENIFIRTKDGVRLNLILVRYTGDNSPYCPTIIYFHGNAGNIG HRLPNALLMLVNLKVNLVLVDYRGYGKSEGEASEEGLYLDSEAVLDYVMTRPDLDKTKVFLFGR SLGGAVAIHLASENSHRISAIMVENTFLSIPHMASTLFSFFPMRYLPLWCYKNKFLSYRKISQC RMPSLFISGLSDQLIPPVMMKQLYELSPSRTKRLAIFPDGTHNDTWQCQGYFTALEQFIKEVIK SHSPEDMTKTSSNVTII hide sequence

RefSeq Acc Id:	XP_008769618 ⟸ XM_008771396
- Peptide Label:	isoform X1
- UniProtKB:	D4A1B6 (UniProtKB/TrEMBL), A6IWS1 (UniProtKB/TrEMBL), A6IWS0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEKPWMLWSFIERWLLALVSWSWALCRISLLPLIVTFHLYGGIVLLLLIFVSIAGILYKFQDVL LYFPEQPSSSRLYVPMPTGIPHENIFIRTKDGVRLNLILVRYTGDNSPYCPTIIYFHGNAGNIG HRLPNALLMLVNLKVNLVLVDYRGYGKSEGEASEEGLYLDSEAVLDYVMTRPDLDKTKVFLFGR SLGGAVAIHLASENSHRISAIMVENTFLSIPHMASTLFSFFPMRYLPLWCYKNKFLSYRKISQC RMPSLFISGLSDQLIPPVMMKQLYELSPSRTKRLAIFPDGTHNDTWQCQGYFTALEQFIKEVIK SHSPEDMTKTSSNVTII hide sequence

RefSeq Acc Id:	XP_008769617 ⟸ XM_008771395
- Peptide Label:	isoform X1
- UniProtKB:	D4A1B6 (UniProtKB/TrEMBL), A6IWS1 (UniProtKB/TrEMBL), A6IWS0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEKPWMLWSFIERWLLALVSWSWALCRISLLPLIVTFHLYGGIVLLLLIFVSIAGILYKFQDVL LYFPEQPSSSRLYVPMPTGIPHENIFIRTKDGVRLNLILVRYTGDNSPYCPTIIYFHGNAGNIG HRLPNALLMLVNLKVNLVLVDYRGYGKSEGEASEEGLYLDSEAVLDYVMTRPDLDKTKVFLFGR SLGGAVAIHLASENSHRISAIMVENTFLSIPHMASTLFSFFPMRYLPLWCYKNKFLSYRKISQC RMPSLFISGLSDQLIPPVMMKQLYELSPSRTKRLAIFPDGTHNDTWQCQGYFTALEQFIKEVIK SHSPEDMTKTSSNVTII hide sequence

Ensembl Acc Id:

ENSRNOP00000019563 ⟸ ENSRNOT00000019563

Ensembl Acc Id:

ENSRNOP00000084255 ⟸ ENSRNOT00000101631

Ensembl Acc Id:

ENSRNOP00000089757 ⟸ ENSRNOT00000111344

Ensembl Acc Id:

ENSRNOP00000079883 ⟸ ENSRNOT00000096786

Ensembl Acc Id:

ENSRNOP00000101323 ⟸ ENSRNOT00000165902

Ensembl Acc Id:

ENSRNOP00000106008 ⟸ ENSRNOT00000166757

Ensembl Acc Id:

ENSRNOP00000110638 ⟸ ENSRNOT00000171512

Protein Domains

AB hydrolase-1

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A1B6-F1-model_v2	AlphaFold	D4A1B6	1-337	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13700248

Promoter ID:

EPDNEW_R10771

Type:

initiation region

Name:

Abhd13_1

Description:

abhydrolase domain containing 13

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	16	85,330,087 - 85,330,147	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308317	AgrOrtholog
BioCyc Gene	G2FUF-10615	BioCyc
Ensembl Genes	ENSRNOG00000014598	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000019563.9	UniProtKB/TrEMBL
	ENSRNOT00000096786.2	UniProtKB/TrEMBL
	ENSRNOT00000101631.2	UniProtKB/TrEMBL
	ENSRNOT00000111344.2	UniProtKB/TrEMBL
	ENSRNOT00000165902	ENTREZGENE
	ENSRNOT00000165902.1	UniProtKB/TrEMBL
	ENSRNOT00000166757.1	UniProtKB/TrEMBL
	ENSRNOT00000171512	ENTREZGENE
	ENSRNOT00000171512.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.1820	UniProtKB/TrEMBL
InterPro	AB_hydrolase	UniProtKB/TrEMBL
	AB_hydrolase_1	UniProtKB/TrEMBL
KEGG Report	rno:306630	UniProtKB/TrEMBL
NCBI Gene	306630	ENTREZGENE
PANTHER	ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN	UniProtKB/TrEMBL
	PROTEIN ABHD13	UniProtKB/TrEMBL
Pfam	Abhydrolase_1	UniProtKB/TrEMBL
PhenoGen	Abhd13	PhenoGen
RatGTEx	ENSRNOG00000014598	RatGTEx
Superfamily-SCOP	SSF53474	UniProtKB/TrEMBL
UniProt	A6IWS0	ENTREZGENE, UniProtKB/TrEMBL
	A6IWS1	ENTREZGENE, UniProtKB/TrEMBL
	D4A1B6	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-02-26	Abhd13	abhydrolase domain containing 13	RGD1308317_predicted	similar to 1110065L07Rik protein (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	RGD1308317_predicted	similar to 1110065L07Rik protein (predicted)	LOC306630_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC306630_predicted	similar to 1110065L07Rik protein (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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