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Gene: Adnp2 (ADNP homeobox 2) Rattus norvegicus

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Symbol:

Adnp2

Name:

ADNP homeobox 2

RGD ID:

1308279

Description:

Predicted to enable DNA binding activity and zinc ion binding activity. Predicted to be involved in nervous system development and regulation of gene expression. Predicted to be active in nucleus. Orthologous to human ADNP2 (ADNP homeobox 2); INTERACTS WITH acrylamide; bisphenol A; vinclozolin.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

activity-dependent neuroprotector homeobox protein 2; ADNP homeobox protein 2; LOC307236; MGC188386; RGD1308279; similar to mKIAA0863 protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ADNP2 (ADNP homeobox 2)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, Panther
Mus musculus (house mouse):	Adnp2 (ADNP homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Adnp2 (ADNP homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ADNP2 (ADNP homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ADNP2 (ADNP homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Adnp2 (ADNP homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ADNP2 (ADNP homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ADNP2 (ADNP homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Adnp2 (ADNP homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Adnp2 (ADNP homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Adnp2 (ADNP homeobox 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Adnp2 (ADNP homeobox 2)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	ADNP2 (ADNP homeobox 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	ADNP2 (ADNP homeobox 2)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	adnp2b (ADNP homeobox 2b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	adnp2b (ADNP homeobox 2b)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	adnp2a (ADNP homeobox 2a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	adnp2a (ADNP homeobox 2a)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	adnp2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	adnp2	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	75,846,860 - 75,871,638 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	18	75,847,165 - 75,903,317 (-)	Ensembl				GRCr8
mRatBN7.2	18	73,571,870 - 73,597,088 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	73,571,936 - 73,628,484 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	18	75,674,513 - 75,698,491 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	76,343,859 - 76,367,838 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	74,189,010 - 74,213,138 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	76,637,415 - 76,661,186 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	76,637,785 - 76,653,056 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	18	72,145,550 - 72,169,321 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	18	77,017,502 - 77,041,570 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	18	72,235,432 - 72,259,493 (-)	NCBI		Celera
RGSC_v3.1	18	77,090,698 - 77,114,104 (-)	NCBI
Cytogenetic Map	18	q12.3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-catechin (ISO)

1-chloro-2,4-dinitrobenzene (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2-methylcholine (ISO)

4,4'-sulfonyldiphenol (ISO)

acrylamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene diol epoxide I (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium dichloride (ISO)

choline (ISO)

cisplatin (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

DDE (ISO)

dorsomorphin (ISO)

folic acid (ISO)

formaldehyde (ISO)

FR900359 (ISO)

GSK-J4 (ISO)

L-methionine (ISO)

leflunomide (ISO)

lithium atom (ISO)

lithium hydride (ISO)

phenylmercury acetate (ISO)

SB 431542 (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

tamibarotene (ISO)

testosterone (ISO)

testosterone enanthate (ISO)

tetrachloromethane (ISO)

thiram (ISO)

titanium dioxide (ISO)

troglitazone (ISO)

valproic acid (ISO)

vinclozolin (EXP)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA-templated transcription (IEA)

nervous system development (ISO)

regulation of gene expression (IBA)

Cellular Component

nucleus (IBA)

Molecular Function

DNA binding (IEA)

metal ion binding (IEA)

protein binding (ISO)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:18179478

Genomics

Comparative Map Data

Adnp2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	75,846,860 - 75,871,638 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	18	75,847,165 - 75,903,317 (-)	Ensembl				GRCr8
mRatBN7.2	18	73,571,870 - 73,597,088 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	73,571,936 - 73,628,484 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	18	75,674,513 - 75,698,491 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	76,343,859 - 76,367,838 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	74,189,010 - 74,213,138 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	76,637,415 - 76,661,186 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	76,637,785 - 76,653,056 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	18	72,145,550 - 72,169,321 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	18	77,017,502 - 77,041,570 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	18	72,235,432 - 72,259,493 (-)	NCBI		Celera
RGSC_v3.1	18	77,090,698 - 77,114,104 (-)	NCBI
Cytogenetic Map	18	q12.3	NCBI

ADNP2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	80,109,262 - 80,140,346 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	80,109,262 - 80,147,523 (+)	Ensembl			hg38	GRCh38
GRCh37	18	77,867,146 - 77,898,229 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	75,967,903 - 75,999,220 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	18	74,639,542 - 74,670,861 (+)	NCBI		Celera
Cytogenetic Map	18	q23	NCBI
HuRef	18	74,488,684 - 74,519,969 (+)	NCBI		HuRef
CHM1_1	18	77,861,922 - 77,893,235 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	18	80,385,719 - 80,416,803 (+)	NCBI		T2T-CHM13v2.0

Adnp2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	80,169,523 - 80,195,284 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	80,169,526 - 80,194,697 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	18	80,126,315 - 80,151,516 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	80,126,311 - 80,151,482 (-)	Ensembl			mm10	GRCm38
MGSCv37	18	80,323,874 - 80,348,221 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	18	80,287,794 - 80,313,822 (-)	NCBI		MGSCv36	mm8
Celera	18	81,246,577 - 81,270,977 (-)	NCBI		Celera
Cytogenetic Map	18	E3	NCBI
cM Map	18	53.28	NCBI

Adnp2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	63,311,741 - 63,347,641 (+)	Ensembl
ChiLan1.0	NW_004955402	63,312,588 - 63,346,307 (+)	NCBI	ChiLan1.0	ChiLan1.0

ADNP2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	17	97,749,314 - 97,780,935 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	18	83,441,935 - 83,473,554 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	73,757,926 - 73,789,771 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	77,080,446 - 77,103,098 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	18	77,080,441 - 77,103,098 (+)	Ensembl			panPan2	panpan1.1

ADNP2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	600,804 - 635,013 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	602,264 - 635,348 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	1,603,531 - 1,638,699 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	398,372 - 434,322 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	399,176 - 434,130 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	452,671 - 487,593 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	397,922 - 432,898 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	569,077 - 604,064 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Adnp2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	14,803,373 - 14,833,146 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936616	123,758 - 146,254 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936616	124,590 - 145,944 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ADNP2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	128,030,715 - 128,113,288 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	6	128,071,503 - 128,113,292 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	310,003,280 - 310,043,658 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ADNP2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	140,780 - 169,416 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	18	139,995 - 169,052 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666060	26,153,278 - 26,181,832 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Adnp2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624806	195,608 - 216,587 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624806	191,927 - 225,321 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Adnp2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	15	52,081,481 - 52,108,769 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Adnp2
271 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	69
Count of miRNA genes:	55
Interacting mature miRNAs:	66
Transcripts:	ENSRNOT00000023748
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1331733	Bp233	Blood pressure QTL 233	3.97196		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	25071126	83910656	Rat
12904069	Cm123	Cardiac mass QTL 123		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	18	33379158	78379158	Rat
1331798	Bp224	Blood pressure QTL 224	3.53873		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	31610505	77371277	Rat
12904070	Cm124	Cardiac mass QTL 124		0.01	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	18	33379158	78379158	Rat
12904071	Am18	Aortic mass QTL 18		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	18	33379158	78379158	Rat
2303584	Gluco55	Glucose level QTL 55	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	18	50795212	86134022	Rat
1331730	Scl27	Serum cholesterol level QTL 27	3.826		blood HDL cholesterol amount (VT:0000184)	serum high density lipoprotein cholesterol level (CMO:0000361)	18	54490801	86134022	Rat
61383	Bp47	Blood pressure QTL 47	17.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	31522783	76522783	Rat
12904067	Cm122	Cardiac mass QTL 122		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	18	33379158	78379158	Rat
61384	Bp48	Blood pressure QTL 48	19.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	62892257	79484461	Rat
1331741	Bp232	Blood pressure QTL 232	3.59112		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	18	23494057	85487725	Rat
1331742	Bp228	Blood pressure QTL 228	3.88752		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	31610505	77371277	Rat
2301417	Bp319	Blood pressure QTL 319		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	33379158	78379158	Rat
1298072	Cia26	Collagen induced arthritis QTL 26	3.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	18	64383762	79484311	Rat
12904073	Kidm71	Kidney mass QTL 71		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	18	33379158	78379158	Rat
631834	Sach3	Saccharin preference QTL 3	3.9	0.01	consumption behavior trait (VT:0002069)	calculated saccharin drink intake volume (CMO:0001600)	18	38575919	83575919	Rat
738008	Hcar14	Hepatocarcinoma resistance QTL 14	4.3		liver integrity trait (VT:0010547)	liver nonremodeling tumorous lesion number (CMO:0001462)	18	57825243	85493247	Rat
1331776	Bp225	Blood pressure QTL 225	2.829		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	18	31610505	77371277	Rat
631518	Bw11	Body weight QTL 11	2.8		body mass (VT:0001259)	body weight (CMO:0000012)	18	36121626	81121626	Rat
1641923	Colcr8	Colorectal carcinoma resistance QTL 8	3.1	0.0014	intestine integrity trait (VT:0010554)	poorly differentiated malignant colorectal tumor number (CMO:0002076)	18	31990891	76990891	Rat
6893683	Bw110	Body weight QTL 110	2.7	0.002	body mass (VT:0001259)	body weight (CMO:0000012)	18	45620306	86134022	Rat
8694366	Abfw8	Abdominal fat weight QTL 8	6.38	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	18	48915737	86134022	Rat
7794793	Mcs34	Mammary carcinoma susceptibility QTL 34	1.54		mammary gland integrity trait (VT:0010552)	mammary tumor incidence/prevalence measurement (CMO:0000946)	18	65635567	85897775	Rat
631274	Sprol1	Serum protein level QTL 1	5.3		blood total protein amount (VT:0005567)	serum total protein level (CMO:0000661)	18	31644508	79484311	Rat
9589041	Epfw12	Epididymal fat weight QTL 12	17.08	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	18	48915737	86134022	Rat
8694432	Bw165	Body weight QTL 165	3.81	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	18	48915737	86134022	Rat
1358193	Emca2	Estrogen-induced mammary cancer QTL 2	1.6		mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	18	65846447	86134022	Rat
1598832	Glom11	Glomerulus QTL 11	2.9		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	18	53266671	86134022	Rat
1331774	Bp226	Blood pressure QTL 226	4.41065		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	31610505	77371277	Rat
9589816	Gluco68	Glucose level QTL 68	7.25	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	18	31990891	76990891	Rat
1600373	Mamtr6	Mammary tumor resistance QTL 6			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	18	19553532	85493247	Rat
8694378	Bw157	Body weight QTL 157	3.59	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	18	31990891	76990891	Rat
1331770	Bp234	Blood pressure QTL 234	3.807		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	45620306	86134022	Rat
2303571	Bw92	Body weight QTL 92	3		body mass (VT:0001259)	body weight (CMO:0000012)	18	50795212	86134022	Rat
2301969	Bp324	Blood pressure QTL 324	4.05		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	61982204	76619168	Rat
631675	Iddm15	Insulin dependent diabetes mellitus QTL 15			urine glucose amount (VT:0001758)	percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)	18	62892257	79484461	Rat
1578667	Bss21	Bone structure and strength QTL 21	3.5		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	18	12066482	85493247	Rat
2303120	Mamtr8	Mammary tumor resistance QTL 8		0.001	mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	18	31610505	85493247	Rat
12880368	Bw187	Body weight QTL 187		0.045	body mass (VT:0001259)	body weight (CMO:0000012)	18	33379158	78379158	Rat
724542	Kidm2	Kidney mass QTL 2	2.6		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	18	61446853	86134022	Rat
61367	Iddm4	Insulin dependent diabetes mellitus QTL 4	2.33	0.0074	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	18	40462383	85462383	Rat
1359020	Ppulsi2	Prepulse inhibition QTL 2	2.71		prepulse inhibition trait (VT:0003088)	acoustic startle response measurement (CMO:0001519)	18	54490801	76272247	Rat
9590318	Scort22	Serum corticosterone level QTL 22	7.64	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	18	31990891	76990891	Rat
1578661	Bss20	Bone structure and strength QTL 20	3.7		femur morphology trait (VT:0000559)	femoral neck cross-sectional area (CMO:0001697)	18	12066482	85493247	Rat
1331754	Bp230	Blood pressure QTL 230	4.61609		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	15642280	86134022	Rat

Markers in Region

RH128019

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	73,572,709 - 73,572,928 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	76,637,516 - 76,637,734	NCBI	Rnor6.0
Rnor_5.0	18	72,169,002 - 72,169,220	UniSTS	Rnor5.0
RGSC_v3.4	18	77,017,603 - 77,017,821	UniSTS	RGSC3.4
Celera	18	72,235,533 - 72,235,751	UniSTS
Cytogenetic Map	18	q12.3	UniSTS

RH134793

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	73,571,968 - 73,572,173 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	76,636,775 - 76,636,979	NCBI	Rnor6.0
Rnor_5.0	18	72,169,757 - 72,169,961	UniSTS	Rnor5.0
RGSC_v3.4	18	77,016,862 - 77,017,066	UniSTS	RGSC3.4
Celera	18	72,234,792 - 72,234,996	UniSTS
RH 3.4 Map	18	788.7	UniSTS
Cytogenetic Map	18	q12.3	UniSTS

UniSTS:237853

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	73,572,932 - 73,573,065 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	76,637,739 - 76,637,871	NCBI	Rnor6.0
Rnor_5.0	18	72,168,864 - 72,168,997	NCBI	Rnor5.0
RGSC_v3.4	18	77,017,826 - 77,017,958	UniSTS	RGSC3.4
Celera	18	72,235,756 - 72,235,888	UniSTS
Cytogenetic Map	18	q12.3	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
23	13	82	212	91	90	59	146	59	6	473	271	22	190	112	124	31	34	34

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001127373	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437442	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096772	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277295	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC166606	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000078496 ⟹ ENSRNOP00000068569

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	75,847,165 - 75,855,415 (-)	Ensembl
mRatBN7.2 Ensembl	18	73,572,906 - 73,580,437 (-)	Ensembl
Rnor_6.0 Ensembl	18	76,637,785 - 76,653,056 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000096066 ⟹ ENSRNOP00000094768

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	75,847,165 - 75,871,677 (-)	Ensembl
mRatBN7.2 Ensembl	18	73,571,936 - 73,583,220 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000106123 ⟹ ENSRNOP00000076656

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	75,847,604 - 75,901,691 (-)	Ensembl
mRatBN7.2 Ensembl	18	73,572,613 - 73,597,080 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000107956 ⟹ ENSRNOP00000086198

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	75,847,604 - 75,903,317 (-)	Ensembl
mRatBN7.2 Ensembl	18	73,572,613 - 73,628,484 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000122618 ⟹ ENSRNOP00000100771

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	75,847,604 - 75,870,713 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000128134 ⟹ ENSRNOP00000100826

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	75,847,604 - 75,897,338 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000142682 ⟹ ENSRNOP00000106517

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	75,847,604 - 75,901,454 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000153111 ⟹ ENSRNOP00000112341

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	75,847,604 - 75,871,706 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000168420 ⟹ ENSRNOP00000103684

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	75,847,604 - 75,870,921 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000172426 ⟹ ENSRNOP00000105330

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	18	75,847,604 - 75,903,317 (-)	Ensembl

RefSeq Acc Id:

NM_001127373 ⟹ NP_001120845

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	75,847,600 - 75,871,638 (-)	NCBI
mRatBN7.2	18	73,572,609 - 73,596,648 (-)	NCBI
Rnor_6.0	18	76,637,415 - 76,661,186 (-)	NCBI
Rnor_5.0	18	72,145,550 - 72,169,321 (+)	NCBI
RGSC_v3.4	18	77,017,502 - 77,041,570 (-)	RGD
Celera	18	72,235,432 - 72,259,493 (-)	RGD

Sequence:

show sequence

CTCGAGGCCCGCGGGGTCCAGGGGCCTGGAGGGGCCCGTGAGATGAGCCCAGGGGGTCCCCAGG
CACACTCTACACCCATTGGCTGGCCTCGTCGGCATGCAAATAAGGCAACGTCACTTCCTGAGGC
AGCTGAGCGCCATCTTCTCTTTCTGGCGCGCGGGAGGAGGGACGGGCGCGGGGCGGGGGTCCCG
CCGCGTAGGCGGAGGACGCGGCGGTGTTGCGACGGCGGCGGGACGCGGCGCTCCTCGCGCCCCG
TGGTAGGAAAATATCAAAAATGTTTCAAATTCCTGTGCAGAATCTTGACAACATCAGAAAGGTG
CGGAAGAGGGTGAAAGGCATCCTTGTGGACATTGGACTTGACAGCTGCAAGGAGCTGCTGAAGG
ATCTTAAAGGCTTTGATCCGGGAGAGAAGTACTTTTGTAATACATCGTGGGGAGATGTTTCTCT
TTGGGAACCTTCTGGAAAGAGAGCGAAATACAGAACAAAGCCCTACTGCTGTAGTCTCTGCAGG
TACTCAACGAAGGTGCTCACCTCCCTCAAAAATCACCTGCACCGATACCACGAAGAGGAGGCTG
ACCAGGAGCTCATGATCCCCTGCCCCAACTGCCCGTTTGCCTCTCAGCCCAAGGTTGTGGGCAA
GCACTTCAGAATGTTCCACGCGCCTGCGCGGAAAGTCCAGAGCTACACAGTGAACATCCTGGGT
GAGGCGAAGACTTCAAGGAGTGATGTGATAAGCTTCACATGTTTAAAATGTAACTTTTCAAACA
CTCTGTACTACAGCATGAAGAAGCATGTGCTGGTGGCCCATTTTAATTACTTAATTAACTCCTA
CTTTGGATTGCGAACTGAGGAAACAGGAGAACAACCGAAAGCAAGTGATCCAGTTTCTGTGGAT
AAAGCCCTGCCATTTGACAAGTACTACTGTAAAAAATGCAGCGCCATCGCCAGTAGTCAGGATG
CCCTGATGTATCACATTCTGACATCAGATGCACATAGGGACTTGGAGAATAAGCTGAGGTCTGT
TATCTCAGAGCACATCAAGAGGACCGGGTTTCTGAAGCAAATGCATATTGCTCCAAAGCCAGTG
ACCCACATAGCTTTACCGCCAAACAGCAGTGCTCCGAGCATTGCAGCCCCTCCTCCTTGCTTCC
AGCTTGCTTTGCCACAGAACAGTCAAAGTCCCGGCACTGTGCAGTCAGTGACTGTGGCCCCAGG
CACTTCTGGGAGCCTTACACACTCACCACCTACCACGGCCCAGTCTCATGTAGCTCTGGTCTCC
AGCTCTTTGCCTGTGTGCCAGAGTAGCCTCACCCTGCAGCAGTCCGCTCCCCCACCTGTCTTTC
TCTCTCACAGTGTCCCACTGAGTCAGCCCGTCAGTACTTCTGTGCTGCCTCTCACTCAGCCACT
TGGGCCTGTGAATAAGTCTGTTGGAACAAGCCTCCTCCCTGTGAACCAAGCCATGTGCTCCGTG
AACCAAGCTGTCCGCCCTGGAGTTTTACCCCTCCCTAAGCCCATGGGGCCCATAAACAGACCTG
TGGGCCCTGGTGTCTTGCCTGTGGGTCCCTCTGTTAACTCAGGGGTTCTCCAGGCTACATCTCC
TGGGGTGATTTCTGTAGGTCGAGCAGTTCCATCAGGAGTCCTTCCTGCAGGTCAGGTGACCCCT
GCTGGTGTGATCCCTGGGCAGACAGCCACTTCCGGGGTCTTACCCACTGGCCAGGTGGTCCAGT
CGTCAGTTCTCCCTGTTGGCCAGACAGCGCCATCTCGAGTTCTCCCTCCTGGCCAGACAGTGCC
CTTGAGGGTTCTCCCTGCAGGCCAGGTGGTACCGCCTGGGCTGCTTTCTCCAAACCAAACTGTC
CCCTCGGGAGTTGTCCCTGTGAATCAAGGTGTGAACTCTGGTGTTCTTCAGCTCAGTCAGCCAG
TAACACCAGGAGTCCTTCCTGTGGGCCCACCCGTGAGGCCTGGTGTTCTGCAGCTCAGTCCGTC
TGTCAGCACCAGCATCCTGCCCGTGAGCCAGCCGGTGAGAGCTGGAACGTCCCAAAACACTACT
TTCCTTACTTCAGGTTCTATTCTCAGACAGCTCATTCCAACTGGGAAACAGGTGAATGGAATCC
CCACCTATACGCTGGCCCCAGTGTCCGTCACTCTGCCGGTGCCCTCCGCTGGAGGCCTTGCAGC
TGTTGGACCGCCACCCCAGGTGCCAGTGCAGTTCCTGCCCTCAAGCTCGGGCACACAGATGGGC
AGCTCCTTGCCCAGCCTGCCCTCGCCACAGGTGCTAGTGAGCCCTGCCCCTAGCGTGTTTGTTC
AGGCTACCCCGCCTGTGGCAGATGCAAATCAGGCACTCAGACAGGCCAAGCAGTGGAAAACATG
CCCAGTTTGCAACGAGCTCTTCCCTGCCAACGTCTACCAGGTCCACATGGAAGTGGCTCACACG
CAGAGCGAGGCCAAGTCCAGTGAGAAGCCTGAGCCCGAAAGGCTTGCTGCATGCGCCCCATTTC
TGAAGTGGATGAGAGAGAAGACAGTGCGCTGCCTCTCTTGTAAGTGCCTGGTCTCGCAGGAGGA
GCTGATGCACCATTTGCTCATGCATGGCCTGGGGTGCCTGTTCTGTCCATGCACTTTTCATGAT
GTCCGGGGCCTTGTGGAGCACAGCAGGACTAAGCACCTGGGCAAGAAGAGACTGTCTATGGATT
ACAGTAACAGAGGTTTCCAGCTGGACTTGGATGCTAATGGGAACCTGCTGTTCCCTCATCTCGA
TTTCATCACCATACTGCCACGAGAGAAACTTGGAGAGCGAGAAGTGTACCTGGCTATCCTTGCT
GGAATACACTCCAAGTCGTTGGTCCCTGTGTACGTTAAGGTGAGGCCTCAGCCTGAGGTTGCAC
CAAAGATACCTAACAGACAGAAGCTGACCTGCCCGTTCTGTTTTGGCACATTCATGGCTGCTGA
TGCCTACGAGCTGCATCTGAAGGAGAGGCACCATGTCATGCCCACAGTCCATACAATGCTCCGG
TCTCCGGCCTTTAAGTGCATCCACTGTTGTGGGGTCTACACTGGAAACATGACCTTAGGAGCCA
TCGCTGTCCATTTGCTCCGTTGTAGAAGTGCTCCAAAGGACAGCAGCTCAGACCTGCAAGCCCA
GCCAGATTTTATCGAGAGCAGTGAACTGCTGATGGTCAATGGGGAAGTGATCCCCGAGTCCACC
TTTCCTCTGAAGAGAAAGCTGCCAGAAGGCCATTTAGGGCCAGAAGAGCAGGGGGACGGGGACG
AGCCCCAGCTCACAGTAGACACCGATGCGAGCCCAGGTTCAGAGAAAGGGCTGAGTGCTGTGCC
TTTGAAGAGACAGAAGAATGAGAGCAGGACAGAGGGGTCAGGGGCCAGTGATGACTCCCTGCAG
GTGTTGGCGTTAGACCCCAGTAAGTATGGAAGTCGTTCCTATGAGGAAAAGAAACAGTTCCTCA
GAGACTATTTTCACAAGAGACCATATCCTAGTCGAAAAGAAGTGGAACTACTGTCCTCGCTCTT
GTGGGTGTGGAAAATCGACGTGGCCTCGTTCTTTGGGAAAAGGAGGTATATCTGCATGAAAGCA
ATAAAATCCCACAAGCCCTCTGTACTTCTGGGTTTTGATATGTCTGAGCTTAAGAATGTCAAAC
ACAGGCTGAACTTTGAGTGTGAGTCAGAAAACCTGTAGGAGAGTAAGTCTGAAGTCTCCTGACT
TCCAGCCCTTCCCACCTCTCGCTCTGTTGTAAGTGTCCGAGGCCCTTCAAGGTGTCCCAGGTGC
TCAGAAAGCCTGAAAAGGAAGCACACACTGCCACAGAGGAGCTGTTCTCCGCAGTTTGCGTTGC
GGCTGTCTGTTTTCCTTCTGTCATGTAAATTAAATCTTTGGTATTCCATGCACGCCTTGTTTCC
CCACGAGTGTCAGTGTCAATAGCAACAACCTGGAGTCTGCAGATACTTGGTTTTTCATTTTAGA
GAATTTCTGCTTGTTTGAGAAACTTGATTAATAGAAAATTGAAGCGTTGCTCCCTCTTAGTTCC
TAGCTGCAGCTAGTGACAGTGTGTGTTTAGAGAAGCAAGCACTCTGATGTGTATGACTCCCTAA
GGACATACTTTTAAGCATTAACTTCTGCTGATTCTGTGACCGACGTTTGCTTAAGGCTACAAAT
TTGATTTACACCTTTTCAAGTGTCCCCTGACAGCTATTTTTTTAATATCATTATTCATTAAAAA
AATCCCAGATGTTTTCCATTTATTAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_039096772 ⟹ XP_038952700

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	75,846,860 - 75,871,541 (-)	NCBI
mRatBN7.2	18	73,571,870 - 73,597,088 (-)	NCBI

RefSeq Acc Id:

XM_063277295 ⟹ XP_063133365

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	75,846,860 - 75,856,392 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001120845	(Get FASTA)	NCBI Sequence Viewer
	NP_001424371	(Get FASTA)	NCBI Sequence Viewer
	XP_038952700	(Get FASTA)	NCBI Sequence Viewer
	XP_063133365	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI66606	(Get FASTA)	NCBI Sequence Viewer
	EDL75239	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000068569.2
	ENSRNOP00000076656
	ENSRNOP00000076656.2
	ENSRNOP00000086198.1
	ENSRNOP00000094768
	ENSRNOP00000094768.2
	ENSRNOP00000100771.1
	ENSRNOP00000100826.1
	ENSRNOP00000103684.1
	ENSRNOP00000105330.1
	ENSRNOP00000106517.1
	ENSRNOP00000112341.1

RefSeq Acc Id:

NP_001120845 ⟸ NM_001127373

- UniProtKB:

B2GVB8 (UniProtKB/TrEMBL), A0A8I6A6N1 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFQIPVQNLDNIRKVRKRVKGILVDIGLDSCKELLKDLKGFDPGEKYFCNTSWGDVSLWEPSGK
RAKYRTKPYCCSLCRYSTKVLTSLKNHLHRYHEEEADQELMIPCPNCPFASQPKVVGKHFRMFH
APARKVQSYTVNILGEAKTSRSDVISFTCLKCNFSNTLYYSMKKHVLVAHFNYLINSYFGLRTE
ETGEQPKASDPVSVDKALPFDKYYCKKCSAIASSQDALMYHILTSDAHRDLENKLRSVISEHIK
RTGFLKQMHIAPKPVTHIALPPNSSAPSIAAPPPCFQLALPQNSQSPGTVQSVTVAPGTSGSLT
HSPPTTAQSHVALVSSSLPVCQSSLTLQQSAPPPVFLSHSVPLSQPVSTSVLPLTQPLGPVNKS
VGTSLLPVNQAMCSVNQAVRPGVLPLPKPMGPINRPVGPGVLPVGPSVNSGVLQATSPGVISVG
RAVPSGVLPAGQVTPAGVIPGQTATSGVLPTGQVVQSSVLPVGQTAPSRVLPPGQTVPLRVLPA
GQVVPPGLLSPNQTVPSGVVPVNQGVNSGVLQLSQPVTPGVLPVGPPVRPGVLQLSPSVSTSIL
PVSQPVRAGTSQNTTFLTSGSILRQLIPTGKQVNGIPTYTLAPVSVTLPVPSAGGLAAVGPPPQ
VPVQFLPSSSGTQMGSSLPSLPSPQVLVSPAPSVFVQATPPVADANQALRQAKQWKTCPVCNEL
FPANVYQVHMEVAHTQSEAKSSEKPEPERLAACAPFLKWMREKTVRCLSCKCLVSQEELMHHLL
MHGLGCLFCPCTFHDVRGLVEHSRTKHLGKKRLSMDYSNRGFQLDLDANGNLLFPHLDFITILP
REKLGEREVYLAILAGIHSKSLVPVYVKVRPQPEVAPKIPNRQKLTCPFCFGTFMAADAYELHL
KERHHVMPTVHTMLRSPAFKCIHCCGVYTGNMTLGAIAVHLLRCRSAPKDSSSDLQAQPDFIES
SELLMVNGEVIPESTFPLKRKLPEGHLGPEEQGDGDEPQLTVDTDASPGSEKGLSAVPLKRQKN
ESRTEGSGASDDSLQVLALDPSKYGSRSYEEKKQFLRDYFHKRPYPSRKEVELLSSLLWVWKID
VASFFGKRRYICMKAIKSHKPSVLLGFDMSELKNVKHRLNFECESENL

hide sequence

Ensembl Acc Id:

ENSRNOP00000068569 ⟸ ENSRNOT00000078496

RefSeq Acc Id:	XP_038952700 ⟸ XM_039096772
- Peptide Label:	isoform X1

Ensembl Acc Id:

ENSRNOP00000086198 ⟸ ENSRNOT00000107956

Ensembl Acc Id:

ENSRNOP00000094768 ⟸ ENSRNOT00000096066

Ensembl Acc Id:

ENSRNOP00000076656 ⟸ ENSRNOT00000106123

RefSeq Acc Id:	XP_063133365 ⟸ XM_063277295
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2JT49 (UniProtKB/TrEMBL), A0A8I6AMU3 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000100826 ⟸ ENSRNOT00000128134

Ensembl Acc Id:

ENSRNOP00000105330 ⟸ ENSRNOT00000172426

Ensembl Acc Id:

ENSRNOP00000112341 ⟸ ENSRNOT00000153111

Ensembl Acc Id:

ENSRNOP00000106517 ⟸ ENSRNOT00000142682

Ensembl Acc Id:

ENSRNOP00000100771 ⟸ ENSRNOT00000122618

Ensembl Acc Id:

ENSRNOP00000103684 ⟸ ENSRNOT00000168420

Protein Domains

C2H2-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2JT49-F1-model_v2	AlphaFold	A0A0G2JT49	1-1207	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308279	AgrOrtholog
BioCyc Gene	G2FUF-6872	BioCyc
Ensembl Genes	ENSRNOG00000053370	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000078496.3	UniProtKB/TrEMBL
	ENSRNOT00000096066	ENTREZGENE
	ENSRNOT00000096066.2	UniProtKB/TrEMBL
	ENSRNOT00000106123	ENTREZGENE
	ENSRNOT00000106123.2	UniProtKB/TrEMBL
	ENSRNOT00000107956.2	UniProtKB/TrEMBL
	ENSRNOT00000122618.1	UniProtKB/TrEMBL
	ENSRNOT00000128134.1	UniProtKB/TrEMBL
	ENSRNOT00000142682.1	UniProtKB/TrEMBL
	ENSRNOT00000153111.1	UniProtKB/TrEMBL
	ENSRNOT00000168420.1	UniProtKB/TrEMBL
	ENSRNOT00000172426.1	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7934474	IMAGE-MGC_LOAD
InterPro	ADNP/ADNP2	UniProtKB/TrEMBL
	ADNP_Znf	UniProtKB/TrEMBL
	Homeobox	UniProtKB/TrEMBL
	Homeodomain-like	UniProtKB/TrEMBL
	Znf_C2H2_type	UniProtKB/TrEMBL
KEGG Report	rno:307236	UniProtKB/TrEMBL
MGC_CLONE	MGC:188386	IMAGE-MGC_LOAD
NCBI Gene	307236	ENTREZGENE
PANTHER	ACTIVITY-DEPENDENT NEUROPROTECTOR HOMEOBOX PROTEIN 2	UniProtKB/TrEMBL
	PTHR15740	UniProtKB/TrEMBL
Pfam	ADNP_N	UniProtKB/TrEMBL
PhenoGen	Adnp2	PhenoGen
PROSITE	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000053370	RatGTEx
SMART	HOX	UniProtKB/TrEMBL
	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	Homeodomain_like	UniProtKB/TrEMBL
UniProt	A0A0G2JT49	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZJ89_RAT	UniProtKB/TrEMBL
	A0A8I6A6N1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AMU3	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0L9V0_RAT	UniProtKB/TrEMBL
	A0ABK0LFX4_RAT	UniProtKB/TrEMBL
	A0ABK0LH70_RAT	UniProtKB/TrEMBL
	A0ABK0LLK6_RAT	UniProtKB/TrEMBL
	A0ABK0LN30_RAT	UniProtKB/TrEMBL
	A0ABK0LT63_RAT	UniProtKB/TrEMBL
	B2GVB8	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-02-26	Adnp2	ADNP homeobox 2	RGD1308279_predicted	similar to mKIAA0863 protein (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	RGD1308279_predicted	similar to mKIAA0863 protein (predicted)	LOC307236_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC307236_predicted	similar to mKIAA0863 protein (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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