Pdgfrl (platelet-derived growth factor receptor-like) - Rat Genome Database

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Gene: Pdgfrl (platelet-derived growth factor receptor-like) Rattus norvegicus
Analyze
Symbol: Pdgfrl
Name: platelet-derived growth factor receptor-like
RGD ID: 1308028
Description: Predicted to enable platelet-derived growth factor receptor activity. Predicted to be involved in cellular response to platelet-derived growth factor stimulus and platelet-derived growth factor receptor signaling pathway. Predicted to be located in extracellular region. Human ortholog(s) of this gene implicated in colorectal cancer and hepatocellular carcinoma. Orthologous to human PDGFRL (platelet derived growth factor receptor like); INTERACTS WITH 1-[3-(dimethylamino)propyl]-1-(4-fluorophenyl)-1,3-dihydro-2-benzofuran-5-carbonitrile; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC290771; PDGFR-like protein; platelet-derived growth factor receptor-like protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81658,051,421 - 58,111,327 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1658,051,440 - 58,111,327 (-)EnsemblGRCr8
mRatBN7.21651,347,929 - 51,407,850 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1651,347,948 - 51,407,850 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1656,667,202 - 56,727,030 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01660,067,075 - 60,126,909 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01655,301,148 - 55,360,984 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01654,386,269 - 54,450,426 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1654,386,288 - 54,450,426 (-)Ensemblrn6Rnor6.0
Rnor_5.01654,098,419 - 54,161,461 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41654,664,213 - 54,742,494 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1649,242,223 - 49,300,861 (-)NCBICelera
RGSC_v3.11654,664,306 - 54,742,569 (-)NCBI
Cytogenetic Map16q12.1NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (ISO)
1,2-dimethylhydrazine  (ISO)
1-[3-(dimethylamino)propyl]-1-(4-fluorophenyl)-1,3-dihydro-2-benzofuran-5-carbonitrile  (EXP)
1-nitropyrene  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
5-aza-2'-deoxycytidine  (ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
amiodarone  (ISO)
antirheumatic drug  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (ISO)
Benzo[k]fluoranthene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
Butylbenzyl phthalate  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
calcitriol  (ISO)
carbon nanotube  (ISO)
citalopram  (EXP)
cobalt dichloride  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
dibutyl phthalate  (EXP)
diethylstilbestrol  (EXP)
dinophysistoxin 1  (ISO)
dioxygen  (ISO)
diuron  (EXP)
doxorubicin  (ISO)
endosulfan  (EXP)
entinostat  (ISO)
epoxiconazole  (ISO)
escitalopram  (EXP)
folic acid  (ISO)
furan  (EXP)
genistein  (ISO)
gentamycin  (EXP)
indometacin  (ISO)
lipopolysaccharide  (ISO)
lithium chloride  (ISO)
methylmercury chloride  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
monosodium L-glutamate  (ISO)
N-methyl-4-phenylpyridinium  (EXP)
okadaic acid  (ISO)
oxaliplatin  (EXP)
paracetamol  (EXP,ISO)
perfluorohexanesulfonic acid  (ISO)
pirinixic acid  (ISO)
quercetin  (ISO)
quinolin-8-ol  (ISO)
resveratrol  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (ISO)
streptozocin  (ISO)
sunitinib  (ISO)
T-2 toxin  (ISO)
temozolomide  (ISO)
thiram  (ISO)
titanium dioxide  (ISO)
topotecan  (EXP)
trichloroethene  (EXP)
urethane  (ISO)
valproic acid  (ISO)
zearalenone  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:12477932   PMID:15489334   PMID:21092323  


Genomics

Comparative Map Data
Pdgfrl
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81658,051,421 - 58,111,327 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1658,051,440 - 58,111,327 (-)EnsemblGRCr8
mRatBN7.21651,347,929 - 51,407,850 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1651,347,948 - 51,407,850 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1656,667,202 - 56,727,030 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01660,067,075 - 60,126,909 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01655,301,148 - 55,360,984 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01654,386,269 - 54,450,426 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1654,386,288 - 54,450,426 (-)Ensemblrn6Rnor6.0
Rnor_5.01654,098,419 - 54,161,461 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41654,664,213 - 54,742,494 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1649,242,223 - 49,300,861 (-)NCBICelera
RGSC_v3.11654,664,306 - 54,742,569 (-)NCBI
Cytogenetic Map16q12.1NCBI
PDGFRL
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38817,576,433 - 17,643,144 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl817,576,433 - 17,644,071 (+)Ensemblhg38GRCh38
GRCh37817,433,942 - 17,500,653 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36817,478,986 - 17,544,903 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34817,478,985 - 17,544,903NCBI
Celera816,399,596 - 16,466,302 (+)NCBICelera
Cytogenetic Map8p22NCBI
HuRef815,978,514 - 16,045,136 (+)NCBIHuRef
CHM1_1817,635,411 - 17,702,091 (+)NCBICHM1_1
T2T-CHM13v2.0817,843,562 - 17,910,296 (+)NCBIT2T-CHM13v2.0
Pdgfrl
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39841,379,270 - 41,443,819 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl841,379,249 - 41,443,822 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38840,926,233 - 40,990,782 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl840,926,212 - 40,990,785 (+)Ensemblmm10GRCm38
MGSCv37842,011,587 - 42,076,136 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36842,425,058 - 42,489,599 (+)NCBIMGSCv36mm8
Celera843,561,949 - 43,620,411 (+)NCBICelera
Cytogenetic Map8A4NCBI
cM Map823.89NCBI
Pdgfrl
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555522,041,267 - 2,077,972 (-)Ensembl
ChiLan1.0NW_0049555522,041,267 - 2,077,971 (-)NCBIChiLan1.0ChiLan1.0
PDGFRL
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2736,049,719 - 36,117,799 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1811,776,593 - 11,844,204 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0816,795,211 - 16,862,637 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1813,747,648 - 13,814,743 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl813,747,164 - 13,816,294 (+)EnsemblpanPan2panpan1.1
PDGFRL
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11640,889,378 - 40,954,998 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1640,889,446 - 40,955,021 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1641,396,499 - 41,461,833 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01642,945,216 - 43,010,559 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1642,945,276 - 43,010,538 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11641,038,523 - 41,103,835 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01641,582,239 - 41,647,536 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01641,776,857 - 41,842,200 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Pdgfrl
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494338,365,571 - 38,411,317 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936614195,030 - 240,502 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936614195,058 - 241,748 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PDGFRL
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl175,279,004 - 5,329,511 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1175,278,872 - 5,328,859 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2175,737,512 - 5,792,691 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PDGFRL
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1815,671,827 - 15,739,396 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl815,671,425 - 15,738,199 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605226,536,741 - 26,605,937 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pdgfrl
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476921,616,954 - 21,668,771 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462476921,617,268 - 21,668,709 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Pdgfrl
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11346,571,758 - 46,615,364 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Pdgfrl
225 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:248
Count of miRNA genes:157
Interacting mature miRNAs:188
Transcripts:ENSRNOT00000014623
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2300163Bmd64Bone mineral density QTL 645.30.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)164445512389455123Rat
70215Niddm29Non-insulin dependent diabetes mellitus QTL 293.54blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)163692878281928782Rat
1578768Stresp22Stress response QTL 222.8thymus mass (VT:0004954)thymus wet weight (CMO:0000855)164199206486992064Rat
737826Alc11Alcohol consumption QTL 113.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16423421266955197Rat
2302057Pia29Pristane induced arthritis QTL 293.60.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)162846870173468701Rat
7205510Activ5Activity QTL 53.780.00028locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)164909919691442908Rat
1357403Slep4Serum leptin concentration QTL 43.91blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)163236104377361043Rat
8694453Bw172Body weight QTL 1728.330.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)163105803976058039Rat
1298529Arunc1Aerobic running capacity QTL 14exercise endurance trait (VT:0002332)longest distance run on treadmill (CMO:0001406)163439829479398294Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683908666195506Rat
2312660Bw95Body weight QTL 950.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)1683908666195506Rat
6903294Stl30Serum triglyceride level QTL 302.60.0013blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)163188527176885271Rat
2293690Bss45Bone structure and strength QTL 455.130.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)164445512389455123Rat
2312666Insul16Insulin level QTL 160.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1683908666195506Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161773081872536785Rat
2301406Kidm39Kidney mass QTL 390.002kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)161590580260905802Rat
2312669Stl23Serum triglyceride level QTL 230.01blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1683908666195506Rat

Markers in Region
AV013190  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21651,348,094 - 51,348,177 (+)MAPPERmRatBN7.2
Rnor_6.01654,386,435 - 54,386,517NCBIRnor6.0
Rnor_5.01654,098,585 - 54,098,667UniSTSRnor5.0
RGSC_v3.41654,664,379 - 54,664,461UniSTSRGSC3.4
Celera1649,242,389 - 49,242,471UniSTS
Cytogenetic Map16q12.1UniSTS
RH133543  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81658,051,587 - 58,051,789 (+)Marker Load Pipeline
mRatBN7.21651,348,095 - 51,348,296 (+)MAPPERmRatBN7.2
Rnor_6.01654,386,436 - 54,386,636NCBIRnor6.0
Rnor_5.01654,098,586 - 54,098,786UniSTSRnor5.0
RGSC_v3.41654,664,380 - 54,664,580UniSTSRGSC3.4
RH 3.4 Map16523.9UniSTS
Cytogenetic Map16q12.1UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
14 12 67 161 91 90 59 74 59 6 332 174 11 140 77 92 31 16 16

Sequence


Ensembl Acc Id: ENSRNOT00000014623   ⟹   ENSRNOP00000014623
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1658,051,440 - 58,111,327 (-)Ensembl
mRatBN7.2 Ensembl1651,347,948 - 51,407,850 (-)Ensembl
Rnor_6.0 Ensembl1654,386,288 - 54,450,426 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000100652   ⟹   ENSRNOP00000088534
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1658,051,440 - 58,095,396 (-)Ensembl
mRatBN7.2 Ensembl1651,347,948 - 51,391,913 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000152361   ⟹   ENSRNOP00000099559
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1658,055,574 - 58,111,327 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000152885   ⟹   ENSRNOP00000100616
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1658,051,440 - 58,107,043 (-)Ensembl
RefSeq Acc Id: NM_001011921   ⟹   NP_001011921
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81658,051,421 - 58,111,327 (-)NCBI
mRatBN7.21651,347,929 - 51,407,850 (-)NCBI
Rnor_6.01654,386,269 - 54,450,426 (-)NCBI
Rnor_5.01654,098,419 - 54,161,461 (-)NCBI
RGSC_v3.41654,664,213 - 54,742,494 (-)RGD
Celera1649,242,223 - 49,300,861 (-)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001011921 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH86555 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000014623
  ENSRNOP00000014623.5
GenBank Protein Q5RJP7 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001011921   ⟸   NM_001011921
- Peptide Label: precursor
- UniProtKB: Q5RJP7 (UniProtKB/Swiss-Prot),   A0A8I6A5A7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000014623   ⟸   ENSRNOT00000014623
Ensembl Acc Id: ENSRNOP00000088534   ⟸   ENSRNOT00000100652
Ensembl Acc Id: ENSRNOP00000099559   ⟸   ENSRNOT00000152361
Ensembl Acc Id: ENSRNOP00000100616   ⟸   ENSRNOT00000152885
Protein Domains
Ig-like   Ig-like C2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5RJP7-F1-model_v2 AlphaFold Q5RJP7 1-375 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700120
Promoter ID:EPDNEW_R10644
Type:initiation region
Name:Pdgfrl_1
Description:platelet-derived growth factor receptor-like
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01654,450,426 - 54,450,486EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1308028 AgrOrtholog
BioCyc Gene G2FUF-11250 BioCyc
Ensembl Genes ENSRNOG00000010832 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000014623 ENTREZGENE
  ENSRNOT00000014623.6 UniProtKB/Swiss-Prot
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7305039 IMAGE-MGC_LOAD
InterPro Ig-like_dom UniProtKB/Swiss-Prot
  Ig-like_dom_sf UniProtKB/Swiss-Prot
  Ig-like_fold UniProtKB/Swiss-Prot
  Ig_sub UniProtKB/Swiss-Prot
  PDGFRL UniProtKB/Swiss-Prot
KEGG Report rno:290771 UniProtKB/Swiss-Prot
MGC_CLONE MGC:105544 IMAGE-MGC_LOAD
NCBI Gene 290771 ENTREZGENE
PANTHER PLATELET-DERIVED GROWTH FACTOR RECEPTOR LIKE UniProtKB/Swiss-Prot
  PTHR15360:SF1 UniProtKB/Swiss-Prot
Pfam Ig_3 UniProtKB/Swiss-Prot
  VEGFR-1-like_Ig-like UniProtKB/Swiss-Prot
PhenoGen Pdgfrl PhenoGen
PROSITE IG_LIKE UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000010832 RatGTEx
SMART SM00409 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot
UniProt A0A8I6A5A7 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0L7A3_RAT UniProtKB/TrEMBL
  A0ABK0L960_RAT UniProtKB/TrEMBL
  PGFRL_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-12-06 Pdgfrl  platelet-derived growth factor receptor-like  Pdgfrl_predicted  platelet-derived growth factor receptor-like (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Pdgfrl_predicted  platelet-derived growth factor receptor-like (predicted)      Symbol and Name status set to approved 70820 APPROVED