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Gene: Dsel (dermatan sulfate epimerase-like) Rattus norvegicus

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Symbol:

Dsel

Name:

dermatan sulfate epimerase-like

RGD ID:

1307724

Description:

Predicted to enable chondroitin-glucuronate 5-epimerase activity. Predicted to be involved in chondroitin sulfate proteoglycan metabolic process and dermatan sulfate proteoglycan metabolic process. Predicted to be located in membrane. Orthologous to human DSEL (dermatan sulfate epimerase like); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol; acetamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

dermatan-sulfate epimerase-like protein; LOC297865; RGD1307724; similar to NCAG1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	DSEL (dermatan sulfate epimerase like)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Dsel (dermatan sulfate epimerase-like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Dsel (dermatan sulfate epimerase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DSEL (dermatan sulfate epimerase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	DSEL (dermatan sulfate epimerase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	DSEL (dermatan sulfate epimerase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DSEL (dermatan sulfate epimerase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Dsel (dermatan sulfate epimerase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Dsel (dermatan sulfate epimerase like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	MYO1H (myosin IH)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	DSEL (dermatan sulfate epimerase like)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Dsel (dermatan sulfate epimerase-like)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	dsela (dermatan sulfate epimerase like a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	dsel	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	dsel	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	194,738 - 200,959 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	179,618 - 200,993 (-)	Ensembl				GRCr8
mRatBN7.2	13	186,413 - 192,592 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	175,805 - 192,647 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	13	148,503 - 154,675 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	1,513,216 - 1,519,388 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	138,815 - 144,987 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	1,942,384 - 1,948,563 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	1,942,499 - 1,946,508 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	1,936,171 - 1,941,861 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	19,394,146 - 19,398,749 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	1,174,831 - 1,181,003 (-)	NCBI		Celera
RGSC_v3.1	13	19,397,161 - 19,402,441 (+)	NCBI
Cytogenetic Map	13	p13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2-hydroxypropanoic acid (ISO)

3,3',5,5'-tetrabromobisphenol A (ISO)

3-chloropropane-1,2-diol (EXP)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

acetamide (EXP)

acrylamide (ISO)

actinomycin D (ISO)

aflatoxin B1 (ISO)

antirheumatic drug (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

bisphenol F (ISO)

butanal (ISO)

calcitriol (ISO)

camptothecin (ISO)

cisplatin (ISO)

cyclosporin A (ISO)

decabromodiphenyl ether (EXP)

dibutyl phthalate (EXP)

diquat (ISO)

diuron (EXP)

dorsomorphin (ISO)

endosulfan (EXP)

ethanol (ISO)

gentamycin (EXP)

GSK-J4 (ISO)

isoflurane (ISO)

methylmercury chloride (ISO)

N-methyl-4-phenylpyridinium (ISO)

nickel atom (ISO)

nickel sulfate (ISO)

Nutlin-3 (ISO)

ozone (ISO)

paracetamol (EXP)

perfluorononanoic acid (ISO)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

rac-lactic acid (ISO)

SB 431542 (ISO)

sevoflurane (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

testosterone (ISO)

thioacetamide (EXP)

trichloroethene (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

urethane (ISO)

valproic acid (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chondroitin sulfate proteoglycan metabolic process (IBA,ISO)

dermatan sulfate proteoglycan metabolic process (IBA,ISO)

Cellular Component

membrane (IEA)

Molecular Function

chondroitin-glucuronate 5-epimerase activity (IBA,IEA,ISO)

isomerase activity (IEA)

sulfotransferase activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:22496542

Genomics

Comparative Map Data

Dsel
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	194,738 - 200,959 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	179,618 - 200,993 (-)	Ensembl				GRCr8
mRatBN7.2	13	186,413 - 192,592 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	175,805 - 192,647 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	13	148,503 - 154,675 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	1,513,216 - 1,519,388 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	138,815 - 144,987 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	1,942,384 - 1,948,563 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	1,942,499 - 1,946,508 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	1,936,171 - 1,941,861 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	19,394,146 - 19,398,749 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	1,174,831 - 1,181,003 (-)	NCBI		Celera
RGSC_v3.1	13	19,397,161 - 19,402,441 (+)	NCBI
Cytogenetic Map	13	p13	NCBI

DSEL
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	67,506,587 - 67,516,720 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	67,506,587 - 67,516,723 (-)	Ensembl			hg38	GRCh38
GRCh37	18	65,173,824 - 65,183,957 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	63,324,799 - 63,334,947 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	18	63,324,798 - 63,334,947	NCBI
Celera	18	62,023,814 - 62,033,959 (-)	NCBI		Celera
Cytogenetic Map	18	q22.1	NCBI
HuRef	18	61,894,294 - 61,904,440 (-)	NCBI		HuRef
CHM1_1	18	65,169,183 - 65,179,327 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	18	67,725,180 - 67,735,312 (-)	NCBI		T2T-CHM13v2.0

Dsel
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	111,786,431 - 111,792,782 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	111,786,432 - 111,792,648 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	111,858,701 - 111,865,052 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	111,858,702 - 111,864,918 (-)	Ensembl			mm10	GRCm38
MGSCv37	1	113,755,279 - 113,761,495 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	113,686,249 - 113,692,465 (-)	NCBI		MGSCv36	mm8
Celera	1	114,603,034 - 114,609,250 (-)	NCBI		Celera
Cytogenetic Map	1	E2.1	NCBI
cM Map	1	50.84	NCBI

Dsel
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	51,017,963 - 51,023,508 (-)	Ensembl
ChiLan1.0	NW_004955402	51,017,963 - 51,023,508 (-)	NCBI	ChiLan1.0	ChiLan1.0

DSEL
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	17	85,023,140 - 85,042,589 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	18	70,694,543 - 70,734,557 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	60,880,241 - 60,890,372 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	64,183,644 - 64,191,363 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2

DSEL
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	10,344,468 - 10,366,936 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	11,370,398 - 11,383,157 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	10,192,758 - 10,205,515 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	10,193,072 - 10,216,657 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	10,228,535 - 10,241,280 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	10,169,612 - 10,178,063 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	10,374,160 - 10,382,631 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

DSEL
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	154,919,550 - 154,935,561 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	154,919,331 - 154,937,484 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

DSEL
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	12,227,239 - 12,237,090 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	18	12,228,947 - 12,232,615 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666060	13,535,421 - 13,548,784 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dsel
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624792	13,671,194 - 13,677,449 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624792	13,671,150 - 13,677,777 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Dsel
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	10	84,769,964 - 84,776,138 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Dsel
18 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	37
Count of miRNA genes:	37
Interacting mature miRNAs:	37
Transcripts:	ENSRNOT00000043890
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2317027	Aia22	Adjuvant induced arthritis QTL 22	2.29		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	13	1	34785618	Rat
2303030	Bp327	Blood pressure QTL 327			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	1	43736554	Rat
1581570	Eae17	Experimental allergic encephalomyelitis QTL 17	4.1		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	13	1	8904467	Rat
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	1	103588154	Rat
738036	Lnnr4	Liver neoplastic nodule remodeling QTL 4	3.64		liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number (CMO:0001461)	13	1	34785618	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	164	90	89	58	76	58	6	339	176	11	143	81	91	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001305281	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001429578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249608	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474024	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000043890 ⟹ ENSRNOP00000051395

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	179,618 - 200,954 (-)	Ensembl
mRatBN7.2 Ensembl	13	175,805 - 192,647 (-)	Ensembl
Rnor_6.0 Ensembl	13	1,942,499 - 1,946,508 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000156385 ⟹ ENSRNOP00000111063

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	191,484 - 200,993 (-)	Ensembl

RefSeq Acc Id:

NM_001305281 ⟹ NP_001292210

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	194,745 - 200,917 (-)	NCBI
mRatBN7.2	13	186,420 - 192,592 (-)	NCBI
Rnor_6.0	13	1,942,391 - 1,948,563 (-)	NCBI
Celera	13	1,174,831 - 1,181,003 (-)	NCBI

Sequence:

show sequence

TTTTCCTGCCATCAGTGGGCTAGTCAGCAACAGCTAGCTGGGCACAGCGTCGGTCCAGGCGGCA
TCGGGCCTCGGGTTACGGTCGCTCTCTTCAAGGCAGCGCCTGGAGATCACCGCCGCCCGCGGTT
TGCCTCCTACCAACGAAGCAGTCCCCGCCAGCGCCTGGCGTTCCTCCCGGCGGGCGTGTCTGGG
TCTCCATCGCGGAGACTCGGCCCTGAGGAGACTCGGCACCTAGGAGAGCAGCGGAGACTGTGGT
GCTGAGAAAAACCACACGCTTTAGAGAACCTCCCCGCCCCCGAAATGTAGGGCCGCTGAGGAGA
ACAAGCCTGGCGGCTGCCTGTGCTCTCCCGGGCCTCACACGGGCGGAGGCTTGTCGAGCTCTTG
ATGTCCGTAGGCCCGCCTCCAAAGAAACCTCAATTGCTTGAGCTGCCACCCTTCGCCTGTGTTG
GGGCCCAGCTCTGCTTGAAGATCCTGTTGCAGGCGGCCTGAGGTAAGCCAACTTGGTCATTTAG
AAGTCTCTAGTCCCCACATTGCAGGCACAGGTCAGGCAGTAGGTACTGGAGCAAAAGGATGTTG
CGTTCTGAAGAAAGGACTTAAAATATGCAACAGGCGGGTCAAATCAGGAACTACTAGACGTGTT
TATTTCCTGAAGAAAGGAGACTTGTCTAAGATAGAAACTTAGTGAGTTTCTTCCAAATCCAAGA
TGGGCAAAAGAGAGGCCTGCTCCTTAAACCCGGGGATGAGCGCCCTCTGGCGGCTTATGGGGAG
GATGTTAACAGCTATAGAGAGGAGTGACACGAAAAAAGAACAAAAGACAGACTTCAGTGTTGTG
AAAGTGGATTTTTTTTACCCACTTGGTGGATGTGTTCATGATTGGAAGAACATCTAGACATTGA
AGAGATTAGACTCTTTTAGAGGTACAGATAAACAAACTTGATATAAGAATATTTGGAAATGCTT
TAAAAAGACGTTTGAAATGAAGGCAGAAAGTTCAATGTCCTTTGACAACCATGTAGGAATTTCT
ACACTTGTTCAGAATATTTTATTTTCCAAAATGGAAGAAGAAACAATTGACAAACCATTGTGCT
TCAGACTCTGAGAAAAAAACATAATGAAATCTGCTCACTCTGTGAAGGACAATACTTTATCATC
TTTTGGGGGACAGACAGAAATGTACCATATGTGTGTGGTAAGTTAATCAGGAAGGATGCTTTCT
TGTGCTCGAAATGACTTCATTTGAATTTTGGAATTTTTTAAATTTTCTCTTTTTCACATGTTAG
TTAGATTTATATACAGAGAATAAATGCTGGATTCCTTGTATTTTCTGACTACAACACTGATTTT
TGTGCATTATGGAGACACTGGAGGCATTAATATTCCTTGAAATATTTTATTGGAAGCAAATGTG
TGCCAAGCACACAAACATGCTATATAATTTCCTCTTTACATCAACTTTCCTTGCTTTGAATGAG
CTGAATGTCACCTGGATTTCACAGCCTATGAAGTATATAGTCTGTTTTTTTGCTACACCTTTAA
TATATAATTTATAGTAACCAGATGGGAAACACATTAAACACTGTGCTTAACATATATGCCTAAG
TAAAAGATCTTCCCCATGGATCATGGCGTTAATGTTTACAGGACATTTATTATTTTTAACATTG
ATGATGTGTAGTTTTACTACTTGTGAAGAATCTGTGAGCAATTATTCTGAATGGGCAGTTTTCA
CTGATGATGTACAATGGTTTAAGACACAGAAAATACAAGATTTCAAACTCAACCAAAAACTTTA
TCCAAATTTATACTTTGATGCCGGAGATATACAAACAATGAAACAACAGTCTCGTACAAGCCAT
TTGCATATTTTTAGAGCTATCAAAAGTGCAGTGACAATTATGCTGTCCAACCCATCATACTACC
TACCTCCACCCAAGCATGCTGAGTTTGCTGCCAAGTGGAACGAAATATATGGTAATAACCTTCC
TCCTTTAGCATTGTATTGTTTATTATGCCCAGAAGACAAGGTTGCCTTTGAATTTGTCATGGAA
TATATGGACAGGATGGTTAGCTACAAAGACTGGCTAGTTCAGAATGCACCAGGGGATGAGGTTC
CACTTGGCCATTCTTTAACAGGTTTTGCTACTGCCTTTGACTTTTTATATAATCTATTAGGTAA
GCAGCGGAAACAAAAATACCTTGAAAAAATTTGGATTGTTACTGAGGAAATGTATGAATATTCC
AAGATTCGCTCATGGGGCAAACAACTTCTTCATAATCACCAAGCTACAAATATGATCGCATTAC
TCATAGGGGCCTTGGTTACTGGAGTAGATAAAGGATCTAAAGCAAACATATGGAAACGGGTTGC
TGTTGATGAGATGGAAAAAACTATGTTTATCTTGAACCATATTGTAGACGGCTCTTTGGATGAA
GGTGTTGCCTATGGCAGCTATACCTCCAAATCAGTTACACAGTATGTTTTCTTGGCACAGCGCC
ATTTTAACATCAGTAACTTTGATAATAACTGGCTAAAAATGCACTTTTGGTTTTATTATGCTAC
ACTTTTGCCAGGCTATCAAAGAACTGTAGGCATAGCAGATTCTAATTATAATTGGTTTTACGGT
CCAGAAAGCCAGTTAATTTTTTTGGATAAGTTCATTTTACGGAATGGAGCTGGAAATTGGTTAG
CTCAGCAAATTAGAAAGCATCGACCTAAGGATGGACCAATGGTTCCTTCCACTGCTCAGCGGTG
GAGTACTCTTCATACTGAATACATCTGGTATGATCCAACGCTCCCCCCACAGCCTCCTGTTGAT
TTTGGCACTGCAAAAATGCACACATTTCCTAACTGGGGTGTTGTGACTTATGGGGGTGGCTTAC
CAAACACACAGACCAATACCTTTGTGTCTTTTAAATCTGGGAAACTGGGAGGACGAGCTGTATA
TGACATAGTTCACTTTCAGCCATATTCCTGGATTGATGGATGGAAAAGCTTTAACCCAGGACAT
GAACATCCAGATCAAAATTCATTTACTTTTGCCCCTAATGGACAAGTATTTGTTTCTGAGGCTC
TTTATGGACCAAAGTTGAGCCACCTTAACAATGTATTGGTGTTCGCCCCATCACCATCAAGCCA
ATGTAATCAGCCCTGGGAAGGTCAACTGGGAGAATGTGCACAATGGCTCAAGTGGACTGGTGAA
GAGGTTGGTGATGCAGCTGGGGAAGTTATTGCTGCTGCTCAACATGGAGAAAGGATGTTTGTGA
GTGGGGAAGCAGTGTCTGCTTATTCTTCTGCAATGAGACTGAAAAGTGTCTATCGTGCTTTAAT
TCTTTTAAATTCGCAAACTCTGCTTGTTGTGGATCATATTGAAAGGCAAGAGACTTCCCCAATA
AATTCTGTCAGTGCCTTCTTTCATAATTTGGATATTGATTTTAAATACATCCCATACAGGTTTA
TGAATCGGTATAATGGTGCCATGATGGATGTGTGGGATGCACACTATAAAATGTTTTGGTTTGA
TCACCATGGCAACAGTCCTGTGGCCAGTATACAAGAAGCAGAACAGGCTGCAGAATTTAAGAAA
CGGTGGACTCAGTTCGTTAATGTTACATTTCATATGGAATCCACAATCACACGAATTGCTTATG
TATTTTATGGTCCATATGTCAATGTTTCCAGCTGCAGATTTATTGATAGTTCCAGTTCTGGACT
TCAGATTTCTTTATATGTCAATAGTACTGAACATAGTGTTTCTGTTGTAACTGACTACCAAAAC
CTGAAAAGCAGATTCAGATACCTGGGATTTGGTGGTTTTGCCAGTGTGGCTAATCAAGGACAAA
TAACTCGATTTGGTTTGGGTACTCAAGCAATATTAAACCCTGTAAGACATGAAAGAGTTATTAA
TTTCCCCTTCGGGTTTAAATTTAATATAGCAGTTGGATTCATTTTGTGTATTAGTTTGGTTATT
TTAACTTTTCAGTGGCGGTTTTACCTTTCCTTTAGAAAGCTAATGCGCTGTGTATTAATACTTG
TTATTGCCTTGTGGTTAATTGAGCTTCTGGATGTATGGAGCACTTGCACTCAGCCCATCTGTGC
AAAGTGGACAAGGACAGAAGCTAAGGCAAATGAGAAGGTCATTATTTCCGAAGGGCATCATGTG
GATCTTCCTAATGTTGTTATTACCTCACTCCCTGGTTCAGGAGCTGAAATTCTCAAACAGCTTT
TTTTCAATAGTAGTGATTTTCTCTACATTAGAATTCCTACGACCTACATGGATATCCCTGAAAC
TGAATTTGAAATTGACTCATTTGTAGATGCTTGTGAATGGAAAGTATCAGATATCCACAGTGGG
CAATTTCATCTTCTTCGAGGGTGGCTGCAGTCTTTGGTCCAGGATACAAAACTTCATTTACAAA
ACATCCATCTACATGAAACCAGTAGGAATAAACTGGTCCAATATTTTACAACTAATAAGGACAA
AAAACGGAAATTGAAAAGAAGGGAGTCTTTGCCAGATCAAAGAAGTAGAATAAAAGGATCATTT
GATATTGATGCTGAATATATTAGGGCTTTAAGAAGACACCTAGTTTATTACCCAAGTGCACGTC
CTGTGCTCAGCTTAAGTAGTGGTAGCTGGACATTGAAGCTTCATTTTTTTCAAGAAGTTTTAGG
AACTTCAATGCGGGCATTGTACATAGTAAGAGACCCCCGAGCTTGGGTCTATTCAATGCTATAT
GGTAGTAAACCAAGTCTTTATTCTTTGAAGAATGTGCCAGACCACTTAGCAAAATTGTTTAAAA
TAGAGGAAGGTAAAAGCAAGTGTAACTCGAATTCTGGCTATGCTTTTGAATATGAATCACTGAA
GAAAGAATTAGAAATACCCCAATTAAATGCTGTCTCATTATTATCTCATTTGTGGGTAGCAAAC
ACTGCAGCAGCCTTGAGAATAAATACGGATTTGCTGCCTACCAATTACCATCTGGTCAAGTTTG
AAGATATTGTTCATTTTCCTCAGAAGACTACTGAAAGGATTTTTGCTTTTCTTGGCATTCCTTT
GTCTCCCGCTAGTTTAAACCAAATACTATTTGCCACTTCCACAAACCTTTTTTATCTTCCATAT
GAGAGGGAAATATCACCATCTAATACTAATATTTGGAAAACAAATTTGCCTAGAAATGAAATAA
AGCTAATTGAAAACATTTGCTGGACACTGATGGATCGTCTAGGATATCCAAAGTTTATGGACTA
AATGCTGCAGGTCAGCAAAATTTGCACTAATATGTCCCAACCTACTTTGTGGATATGAACTATA
AAACTGTTTATTCTTGTACATGTATGTATGTGTGTAGAGAGAATGTGTGTTTTCAGTCTGTTAT
TTCACAGAGATATTTTCAAAATAGGCACTATAGTTGGCCTAGCAGGATTTATTTTTATGTTACC
ACTTTTTTGCCTTTGTTTCTGAATTTTTTTCTGCTAAAATGTTTCTGCTACAGAGGTATATATT
CTGGGGGTCTGAAAATATGGGAAGATTTTAATGAACTTTAACTCACCTTTCGAAACTAGTTATC
TATCTTGGGACCTCAAACACTGCAAAAGGCCTTGCAATTGCTGCTCTATCCAGTCATCTCTTGC
TCATAAGATGGACTACAAAACTTTATGTTTTGAAAAGATCTAATGTTTACCTTGCACACAAAAA
AGAAATAAAAAGAAGGAAAAA

hide sequence

RefSeq Acc Id:

XM_006249608 ⟹ XP_006249670

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	194,738 - 200,959 (-)	NCBI
mRatBN7.2	13	186,413 - 192,576 (-)	NCBI
Rnor_6.0	13	1,942,384 - 1,948,163 (-)	NCBI
Rnor_5.0	13	1,936,171 - 1,941,861 (-)	NCBI

Sequence:

show sequence

CTCCAAAGAAACCTCAATTGCTTGAGCTGCCACCCTTCGCCTGTGTTGGGGCCCAGCTCTGCTT
GAAGATCCTGTTGCAGGCGGCCTGAGAGAGGAGTGACACGAAAAAAGAACAAAAGACAGACTTC
AGTGTTGTGAAAGTGGATTTTTTTTACCCACTTGGTGGATGTGTTCATGATTGGAAGAACATCT
AGACATTGAAGAGATTAGACTCTTTTAGAGGTACAGATAAACAAACTTGATATAAGAATATTTG
GAAATGCTTTAAAAAGACGTTTGAAATGAAGGCAGAAAGTTCAATGTCCTTTGACAACCATGTA
GGAATTTCTACACTTGTTCAGAATATTTTATTTTCCAAAATGGAAGAAGAAACAATTGACAAAC
CATTGTGCTTCAGACTCTGAGAAAAAAACATAATGAAATCTGCTCACTCTGTGAAGGACAATAC
TTTATCATCTTTTGGGGGACAGACAGAAATGTACCATATGTGTGTGGTAAGTTAATCAGGAAGG
ATGCTTTCTTGTGCTCGAAATGACTTCATTTGAATTTTGGAATTTTTTAAATTTTCTCTTTTTC
ACATGTTAGTTAGATTTATATACAGAGAATAAATGCTGGATTCCTTGTATTTTCTGACTACAAC
ACTGATTTTTGTGCATTATGGAGACACTGGAGGCATTAATATTCCTTGAAATATTTTATTGGAA
GCAAATGTGTGCCAAGCACACAAACATGCTATATAATTTCCTCTTTACATCAACTTTCCTTGCT
TTGAATGAGCTGAATGTCACCTGGATTTCACAGCCTATGAAGTATATAGTCTGTTTTTTTGCTA
CACCTTTAATATATAATTTATAGTAACCAGATGGGAAACACATTAAACACTGTGCTTAACATAT
ATGCCTAAGTAAAAGATCTTCCCCATGGATCATGGCGTTAATGTTTACAGGACATTTATTATTT
TTAACATTGATGATGTGTAGTTTTACTACTTGTGAAGAATCTGTGAGCAATTATTCTGAATGGG
CAGTTTTCACTGATGATGTACAATGGTTTAAGACACAGAAAATACAAGATTTCAAACTCAACCA
AAAACTTTATCCAAATTTATACTTTGATGCCGGAGATATACAAACAATGAAACAACAGTCTCGT
ACAAGCCATTTGCATATTTTTAGAGCTATCAAAAGTGCAGTGACAATTATGCTGTCCAACCCAT
CATACTACCTACCTCCACCCAAGCATGCTGAGTTTGCTGCCAAGTGGAACGAAATATATGGTAA
TAACCTTCCTCCTTTAGCATTGTATTGTTTATTATGCCCAGAAGACAAGGTTGCCTTTGAATTT
GTCATGGAATATATGGACAGGATGGTTAGCTACAAAGACTGGCTAGTTCAGAATGCACCAGGGG
ATGAGGTTCCACTTGGCCATTCTTTAACAGGTTTTGCTACTGCCTTTGACTTTTTATATAATCT
ATTAGGTAAGCAGCGGAAACAAAAATACCTTGAAAAAATTTGGATTGTTACTGAGGAAATGTAT
GAATATTCCAAGATTCGCTCATGGGGCAAACAACTTCTTCATAATCACCAAGCTACAAATATGA
TCGCATTACTCATAGGGGCCTTGGTTACTGGAGTAGATAAAGGATCTAAAGCAAACATATGGAA
ACGGGTTGCTGTTGATGAGATGGAAAAAACTATGTTTATCTTGAACCATATTGTAGACGGCTCT
TTGGATGAAGGTGTTGCCTATGGCAGCTATACCTCCAAATCAGTTACACAGTATGTTTTCTTGG
CACAGCGCCATTTTAACATCAGTAACTTTGATAATAACTGGCTAAAAATGCACTTTTGGTTTTA
TTATGCTACACTTTTGCCAGGCTATCAAAGAACTGTAGGCATAGCAGATTCTAATTATAATTGG
TTTTACGGTCCAGAAAGCCAGTTAATTTTTTTGGATAAGTTCATTTTACGGAATGGAGCTGGAA
ATTGGTTAGCTCAGCAAATTAGAAAGCATCGACCTAAGGATGGACCAATGGTTCCTTCCACTGC
TCAGCGGTGGAGTACTCTTCATACTGAATACATCTGGTATGATCCAACGCTCCCCCCACAGCCT
CCTGTTGATTTTGGCACTGCAAAAATGCACACATTTCCTAACTGGGGTGTTGTGACTTATGGGG
GTGGCTTACCAAACACACAGACCAATACCTTTGTGTCTTTTAAATCTGGGAAACTGGGAGGACG
AGCTGTATATGACATAGTTCACTTTCAGCCATATTCCTGGATTGATGGATGGAAAAGCTTTAAC
CCAGGACATGAACATCCAGATCAAAATTCATTTACTTTTGCCCCTAATGGACAAGTATTTGTTT
CTGAGGCTCTTTATGGACCAAAGTTGAGCCACCTTAACAATGTATTGGTGTTCGCCCCATCACC
ATCAAGCCAATGTAATCAGCCCTGGGAAGGTCAACTGGGAGAATGTGCACAATGGCTCAAGTGG
ACTGGTGAAGAGGTTGGTGATGCAGCTGGGGAAGTTATTGCTGCTGCTCAACATGGAGAAAGGA
TGTTTGTGAGTGGGGAAGCAGTGTCTGCTTATTCTTCTGCAATGAGACTGAAAAGTGTCTATCG
TGCTTTAATTCTTTTAAATTCGCAAACTCTGCTTGTTGTGGATCATATTGAAAGGCAAGAGACT
TCCCCAATAAATTCTGTCAGTGCCTTCTTTCATAATTTGGATATTGATTTTAAATACATCCCAT
ACAGGTTTATGAATCGGTATAATGGTGCCATGATGGATGTGTGGGATGCACACTATAAAATGTT
TTGGTTTGATCACCATGGCAACAGTCCTGTGGCCAGTATACAAGAAGCAGAACAGGCTGCAGAA
TTTAAGAAACGGTGGACTCAGTTCGTTAATGTTACATTTCATATGGAATCCACAATCACACGAA
TTGCTTATGTATTTTATGGTCCATATGTCAATGTTTCCAGCTGCAGATTTATTGATAGTTCCAG
TTCTGGACTTCAGATTTCTTTATATGTCAATAGTACTGAACATAGTGTTTCTGTTGTAACTGAC
TACCAAAACCTGAAAAGCAGATTCAGATACCTGGGATTTGGTGGTTTTGCCAGTGTGGCTAATC
AAGGACAAATAACTCGATTTGGTTTGGGTACTCAAGCAATATTAAACCCTGTAAGACATGAAAG
AGTTATTAATTTCCCCTTCGGGTTTAAATTTAATATAGCAGTTGGATTCATTTTGTGTATTAGT
TTGGTTATTTTAACTTTTCAGTGGCGGTTTTACCTTTCCTTTAGAAAGCTAATGCGCTGTGTAT
TAATACTTGTTATTGCCTTGTGGTTAATTGAGCTTCTGGATGTATGGAGCACTTGCACTCAGCC
CATCTGTGCAAAGTGGACAAGGACAGAAGCTAAGGCAAATGAGAAGGTCATTATTTCCGAAGGG
CATCATGTGGATCTTCCTAATGTTGTTATTACCTCACTCCCTGGTTCAGGAGCTGAAATTCTCA
AACAGCTTTTTTTCAATAGTAGTGATTTTCTCTACATTAGAATTCCTACGACCTACATGGATAT
CCCTGAAACTGAATTTGAAATTGACTCATTTGTAGATGCTTGTGAATGGAAAGTATCAGATATC
CACAGTGGGCAATTTCATCTTCTTCGAGGGTGGCTGCAGTCTTTGGTCCAGGATACAAAACTTC
ATTTACAAAACATCCATCTACATGAAACCAGTAGGAATAAACTGGTCCAATATTTTACAACTAA
TAAGGACAAAAAACGGAAATTGAAAAGAAGGGAGTCTTTGCCAGATCAAAGAAGTAGAATAAAA
GGATCATTTGATATTGATGCTGAATATATTAGGGCTTTAAGAAGACACCTAGTTTATTACCCAA
GTGCACGTCCTGTGCTCAGCTTAAGTAGTGGTAGCTGGACATTGAAGCTTCATTTTTTTCAAGA
AGTTTTAGGAACTTCAATGCGGGCATTGTACATAGTAAGAGACCCCCGAGCTTGGGTCTATTCA
ATGCTATATGGTAGTAAACCAAGTCTTTATTCTTTGAAGAATGTGCCAGACCACTTAGCAAAAT
TGTTTAAAATAGAGGAAGGTAAAAGCAAGTGTAACTCGAATTCTGGCTATGCTTTTGAATATGA
ATCACTGAAGAAAGAATTAGAAATACCCCAATTAAATGCTGTCTCATTATTATCTCATTTGTGG
GTAGCAAACACTGCAGCAGCCTTGAGAATAAATACGGATTTGCTGCCTACCAATTACCATCTGG
TCAAGTTTGAAGATATTGTTCATTTTCCTCAGAAGACTACTGAAAGGATTTTTGCTTTTCTTGG
CATTCCTTTGTCTCCCGCTAGTTTAAACCAAATACTATTTGCCACTTCCACAAACCTTTTTTAT
CTTCCATATGAGAGGGAAATATCACCATCTAATACTAATATTTGGAAAACAAATTTGCCTAGAA
ATGAAATAAAGCTAATTGAAAACATTTGCTGGACACTGATGGATCGTCTAGGATATCCAAAGTT
TATGGACTAAATGCTGCAGGTCAGCAAAATTTGCACTAATATGTCCCAACCTACTTTGTGGATA
TGAACTATAAAACTGTTTATTCTTGTACATGTATGTATGTGTGTAGAGAGAATGTGTGTTTTCA
GTCTGTTATTTCACAGAGATATTTTCAAAATAGGCACTATAGTTGGCCTAGCAGGATTTATTTT
TATGTTACCACTTTTTTGCCTTTGTTTCTGAATTTTTTTCTGCTAAAATGTTTCTGCTACAGAG
GTATATATTCTGGGGGTCTGAAAATATGGGAAGATTTTAATGAACTTTAACTCACCTTTCGAAA
CTAGTTATCTATCTTGGGACCTCAAACACTGCAAAAGGCCTTGCAATTGCTGCTCTATCCAGTC
ATCTCTTGCTCATAAGATGGACTACAAAACTTTATGTTTTGAAAAGATCTAATGTTTACCTTGC
ACACAAAAAAGAAATAAAAAGAAGGAAAAATCCTTTA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001292210	(Get FASTA)	NCBI Sequence Viewer
	NP_001416507	(Get FASTA)	NCBI Sequence Viewer
	XP_006249670	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL83012	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000051395.3
	ENSRNOP00000111063
	ENSRNOP00000111063.1

RefSeq Acc Id:

XP_006249670 ⟸ XM_006249608

- Peptide Label:

isoform X1

- Sequence:

show sequence

MALMFTGHLLFLTLMMCSFTTCEESVSNYSEWAVFTDDVQWFKTQKIQDFKLNQKLYPNLYFDA
GDIQTMKQQSRTSHLHIFRAIKSAVTIMLSNPSYYLPPPKHAEFAAKWNEIYGNNLPPLALYCL
LCPEDKVAFEFVMEYMDRMVSYKDWLVQNAPGDEVPLGHSLTGFATAFDFLYNLLGKQRKQKYL
EKIWIVTEEMYEYSKIRSWGKQLLHNHQATNMIALLIGALVTGVDKGSKANIWKRVAVDEMEKT
MFILNHIVDGSLDEGVAYGSYTSKSVTQYVFLAQRHFNISNFDNNWLKMHFWFYYATLLPGYQR
TVGIADSNYNWFYGPESQLIFLDKFILRNGAGNWLAQQIRKHRPKDGPMVPSTAQRWSTLHTEY
IWYDPTLPPQPPVDFGTAKMHTFPNWGVVTYGGGLPNTQTNTFVSFKSGKLGGRAVYDIVHFQP
YSWIDGWKSFNPGHEHPDQNSFTFAPNGQVFVSEALYGPKLSHLNNVLVFAPSPSSQCNQPWEG
QLGECAQWLKWTGEEVGDAAGEVIAAAQHGERMFVSGEAVSAYSSAMRLKSVYRALILLNSQTL
LVVDHIERQETSPINSVSAFFHNLDIDFKYIPYRFMNRYNGAMMDVWDAHYKMFWFDHHGNSPV
ASIQEAEQAAEFKKRWTQFVNVTFHMESTITRIAYVFYGPYVNVSSCRFIDSSSSGLQISLYVN
STEHSVSVVTDYQNLKSRFRYLGFGGFASVANQGQITRFGLGTQAILNPVRHERVINFPFGFKF
NIAVGFILCISLVILTFQWRFYLSFRKLMRCVLILVIALWLIELLDVWSTCTQPICAKWTRTEA
KANEKVIISEGHHVDLPNVVITSLPGSGAEILKQLFFNSSDFLYIRIPTTYMDIPETEFEIDSF
VDACEWKVSDIHSGQFHLLRGWLQSLVQDTKLHLQNIHLHETSRNKLVQYFTTNKDKKRKLKRR
ESLPDQRSRIKGSFDIDAEYIRALRRHLVYYPSARPVLSLSSGSWTLKLHFFQEVLGTSMRALY
IVRDPRAWVYSMLYGSKPSLYSLKNVPDHLAKLFKIEEGKSKCNSNSGYAFEYESLKKELEIPQ
LNAVSLLSHLWVANTAAALRINTDLLPTNYHLVKFEDIVHFPQKTTERIFAFLGIPLSPASLNQ
ILFATSTNLFYLPYEREISPSNTNIWKTNLPRNEIKLIENICWTLMDRLGYPKFMD

hide sequence

RefSeq Acc Id:

NP_001292210 ⟸ NM_001305281

- Peptide Label:

precursor

- Sequence:

show sequence

MALMFTGHLLFLTLMMCSFTTCEESVSNYSEWAVFTDDVQWFKTQKIQDFKLNQKLYPNLYFDA
GDIQTMKQQSRTSHLHIFRAIKSAVTIMLSNPSYYLPPPKHAEFAAKWNEIYGNNLPPLALYCL
LCPEDKVAFEFVMEYMDRMVSYKDWLVQNAPGDEVPLGHSLTGFATAFDFLYNLLGKQRKQKYL
EKIWIVTEEMYEYSKIRSWGKQLLHNHQATNMIALLIGALVTGVDKGSKANIWKRVAVDEMEKT
MFILNHIVDGSLDEGVAYGSYTSKSVTQYVFLAQRHFNISNFDNNWLKMHFWFYYATLLPGYQR
TVGIADSNYNWFYGPESQLIFLDKFILRNGAGNWLAQQIRKHRPKDGPMVPSTAQRWSTLHTEY
IWYDPTLPPQPPVDFGTAKMHTFPNWGVVTYGGGLPNTQTNTFVSFKSGKLGGRAVYDIVHFQP
YSWIDGWKSFNPGHEHPDQNSFTFAPNGQVFVSEALYGPKLSHLNNVLVFAPSPSSQCNQPWEG
QLGECAQWLKWTGEEVGDAAGEVIAAAQHGERMFVSGEAVSAYSSAMRLKSVYRALILLNSQTL
LVVDHIERQETSPINSVSAFFHNLDIDFKYIPYRFMNRYNGAMMDVWDAHYKMFWFDHHGNSPV
ASIQEAEQAAEFKKRWTQFVNVTFHMESTITRIAYVFYGPYVNVSSCRFIDSSSSGLQISLYVN
STEHSVSVVTDYQNLKSRFRYLGFGGFASVANQGQITRFGLGTQAILNPVRHERVINFPFGFKF
NIAVGFILCISLVILTFQWRFYLSFRKLMRCVLILVIALWLIELLDVWSTCTQPICAKWTRTEA
KANEKVIISEGHHVDLPNVVITSLPGSGAEILKQLFFNSSDFLYIRIPTTYMDIPETEFEIDSF
VDACEWKVSDIHSGQFHLLRGWLQSLVQDTKLHLQNIHLHETSRNKLVQYFTTNKDKKRKLKRR
ESLPDQRSRIKGSFDIDAEYIRALRRHLVYYPSARPVLSLSSGSWTLKLHFFQEVLGTSMRALY
IVRDPRAWVYSMLYGSKPSLYSLKNVPDHLAKLFKIEEGKSKCNSNSGYAFEYESLKKELEIPQ
LNAVSLLSHLWVANTAAALRINTDLLPTNYHLVKFEDIVHFPQKTTERIFAFLGIPLSPASLNQ
ILFATSTNLFYLPYEREISPSNTNIWKTNLPRNEIKLIENICWTLMDRLGYPKFMD

hide sequence

Ensembl Acc Id:

ENSRNOP00000051395 ⟸ ENSRNOT00000043890

Ensembl Acc Id:

ENSRNOP00000111063 ⟸ ENSRNOT00000156385

Protein Domains

Sulfotransferase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZYE3-F1-model_v2	AlphaFold	D3ZYE3	1-1208	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307724	AgrOrtholog
BioCyc Gene	G2FUF-18754	BioCyc
Ensembl Genes	ENSRNOG00000032307	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000043890.7	UniProtKB/TrEMBL
	ENSRNOT00000156385	ENTREZGENE
	ENSRNOT00000156385.1	UniProtKB/TrEMBL
Gene3D-CATH	1.50.10.100	UniProtKB/TrEMBL
	2.70.98.70	UniProtKB/TrEMBL
	3.40.50.300	UniProtKB/TrEMBL
InterPro	Chondroitin_lyas	UniProtKB/TrEMBL
	Dermatan-Sulfate_Isomerase	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
	Sulfotransferase_dom	UniProtKB/TrEMBL
KEGG Report	rno:297865	UniProtKB/TrEMBL
NCBI Gene	297865	ENTREZGENE
PANTHER	DERMATAN-SULFATE EPIMERASE-LIKE PROTEIN	UniProtKB/TrEMBL
	PTHR15532	UniProtKB/TrEMBL
Pfam	Sulfotransfer_1	UniProtKB/TrEMBL
PhenoGen	Dsel	PhenoGen
RatGTEx	ENSRNOG00000032307	RatGTEx
Superfamily-SCOP	Chondroitin_lyas	UniProtKB/TrEMBL
	SSF52540	UniProtKB/TrEMBL
UniProt	A6K6R8	ENTREZGENE, UniProtKB/TrEMBL
	D3ZYE3	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-07	Dsel	dermatan sulfate epimerase-like	RGD1307724_predicted	similar to NCAG1 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	RGD1307724_predicted	similar to NCAG1 (predicted)	LOC297865_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC297865_predicted	similar to NCAG1 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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