Advanced Search (OLGA)

Gene: Kif24 (kinesin family member 24) Rattus norvegicus

Analyze

Symbol:

Kif24

Name:

kinesin family member 24

RGD ID:

1307723

Description:

Predicted to enable identical protein binding activity and microtubule motor activity. Predicted to be involved in cilium assembly; microtubule depolymerization; and negative regulation of cilium assembly. Predicted to be located in centriole and centrosome. Predicted to be part of protein-containing complex. Predicted to be active in microtubule. Orthologous to human KIF24 (kinesin family member 24); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

kinesin-like protein KIF24; LOC313170; RGD1307723; similar to CG1453-PA

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	KIF24 (kinesin family member 24)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Kif24 (kinesin family member 24)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Kif24 (kinesin family member 24)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	KIF24 (kinesin family member 24)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	KIF24 (kinesin family member 24)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Kif24 (kinesin family member 24)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	KIF24 (kinesin family member 24)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	KIF24 (kinesin family member 24)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Kif24 (kinesin family member 24)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Kif24 (kinesin family member 24)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	HMGB1 (high mobility group box 1)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	KIF24 (kinesin family member 24)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Kif24 (kinesin family member 24)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	kif24	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	kif24	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	61,357,078 - 61,423,882 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	61,357,940 - 61,399,379 (-)	Ensembl				GRCr8
mRatBN7.2	5	56,561,019 - 56,628,040 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	56,561,154 - 56,628,025 (-)	Ensembl				mRatBN7.2
Rnor_6.0	5	57,778,730 - 57,845,642 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	57,780,389 - 57,845,509 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	62,306,303 - 62,373,428 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	58,821,891 - 58,857,497 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	55,157,149 - 55,224,008 (-)	NCBI		Celera
RGSC_v3.1	5	58,822,069 - 58,857,676 (-)	NCBI
Cytogenetic Map	5	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

asphyxiating thoracic dystrophy 3 (ISO)

neuropathy (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,1,1-trichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

1-naphthyl isothiocyanate (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

acrylamide (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

beta-hexachlorocyclohexane (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (EXP)

calcitriol (ISO)

CGP 52608 (ISO)

chloroprene (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

coumarin (ISO)

dibutyl phthalate (ISO)

dioxygen (ISO)

endosulfan (EXP)

FR900359 (ISO)

hypochlorous acid (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

N-Nitrosopyrrolidine (ISO)

okadaic acid (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

PD 0325901 (ISO)

perfluorooctanoic acid (ISO)

propanal (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

testosterone (ISO)

thapsigargin (ISO)

titanium dioxide (ISO)

triptonide (ISO)

troglitazone (ISO)

trovafloxacin (ISO)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell projection organization (IEA)

cilium assembly (IEA,ISO)

microtubule depolymerization (IBA,IEA,ISO)

microtubule-based movement (IEA)

negative regulation of cilium assembly (IEA,ISO)

Cellular Component

centriole (IEA,ISO)

centrosome (IEA,ISO)

microtubule (IBA,IEA)

protein-containing complex (IEA,ISO)

Molecular Function

ATP binding (IEA)

cytoskeletal motor activity (IEA)

identical protein binding (IEA,ISO)

microtubule binding (IEA)

microtubule motor activity (IBA,IEA,ISO)

nucleotide binding (IEA)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:21620453	PMID:24421332	PMID:26290419

Genomics

Comparative Map Data

Kif24
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	61,357,078 - 61,423,882 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	61,357,940 - 61,399,379 (-)	Ensembl				GRCr8
mRatBN7.2	5	56,561,019 - 56,628,040 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	56,561,154 - 56,628,025 (-)	Ensembl				mRatBN7.2
Rnor_6.0	5	57,778,730 - 57,845,642 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	57,780,389 - 57,845,509 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	62,306,303 - 62,373,428 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	58,821,891 - 58,857,497 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	55,157,149 - 55,224,008 (-)	NCBI		Celera
RGSC_v3.1	5	58,822,069 - 58,857,676 (-)	NCBI
Cytogenetic Map	5	q22	NCBI

KIF24
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	34,252,380 - 34,333,671 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	34,252,380 - 34,329,280 (-)	Ensembl			hg38	GRCh38
GRCh37	9	34,252,378 - 34,329,266 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	34,242,378 - 34,319,198 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	9	34,242,378 - 34,249,703	NCBI
Celera	9	34,184,223 - 34,260,725 (-)	NCBI		Celera
Cytogenetic Map	9	p13.3	NCBI
HuRef	9	34,207,992 - 34,284,438 (-)	NCBI		HuRef
CHM1_1	9	34,252,161 - 34,328,659 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	34,271,317 - 34,378,395 (-)	NCBI		T2T-CHM13v2.0

Kif24
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	41,389,774 - 41,464,918 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	41,390,745 - 41,464,887 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	4	41,389,964 - 41,464,919 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	41,390,745 - 41,464,887 (-)	Ensembl			mm10	GRCm38
MGSCv37	4	41,337,781 - 41,411,881 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	4	41,579,419 - 41,653,511 (-)	NCBI		MGSCv36	mm8
Celera	4	41,052,011 - 41,126,202 (-)	NCBI		Celera
Cytogenetic Map	4	A5	NCBI
cM Map	4	21.51	NCBI

Kif24
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955472	1,792,520 - 1,860,056 (+)	Ensembl
ChiLan1.0	NW_004955472	1,774,850 - 1,868,525 (+)	NCBI	ChiLan1.0	ChiLan1.0

KIF24
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	90,275,131 - 90,351,648 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	90,281,071 - 90,357,589 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	34,088,760 - 34,165,306 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	34,898,729 - 34,973,978 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	34,898,729 - 34,973,978 (-)	Ensembl			panPan2	panpan1.1

KIF24
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	50,974,376 - 51,049,862 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	50,976,627 - 51,022,382 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	49,604,316 - 49,679,465 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	51,916,124 - 51,991,617 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	51,917,996 - 51,963,911 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	50,579,346 - 50,654,589 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	50,447,152 - 50,522,408 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	51,212,315 - 51,287,467 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Kif24
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	165,828,038 - 165,891,210 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936524	2,375,981 - 2,417,096 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936524	2,375,133 - 2,417,096 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

KIF24
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	32,467,072 - 32,552,375 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	10	32,454,615 - 32,552,763 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	36,622,193 - 36,740,522 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

KIF24
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	46,236,329 - 46,349,935 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	46,291,758 - 46,348,098 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666226	24,001 - 82,468 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Kif24
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624736	38,635,037 - 38,738,885 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624736	38,633,343 - 38,745,404 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Kif24
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	4,117,304 - 4,156,002 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Kif24
538 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	280
Count of miRNA genes:	110
Interacting mature miRNAs:	117
Transcripts:	ENSRNOT00000017112, ENSRNOT00000035541
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578776	Stresp18	Stress response QTL 18	2.9		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	5	32751649	77751649	Rat
1298067	Scl15	Serum cholesterol level QTL 15	4.8	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	38011670	83011670	Rat
1300115	Hrtrt7	Heart rate QTL 7	2.76		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	5	52665372	94894052	Rat
6907115	Mcs29	Mammary carcinoma susceptibility QTL 29			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	38004331	83004331	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	44924861	153890773	Rat
1358353	Srcrtb2	Stress Responsive Cort Basal QTL 2	3.48	0.003	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	5	23671493	79046465	Rat
70212	Niddm25	Non-insulin dependent diabetes mellitus QTL 25	3.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	38207390	136631402	Rat
634305	Mamtr1	Mammary tumor resistance QTL 1		0.0001	mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	17576633	62576633	Rat
1331801	Rf33	Renal function QTL 33	4.149		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	48523123	134369373	Rat
1598807	Glom12	Glomerulus QTL 12	2.7		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	5	38011670	83011670	Rat
1302786	Kidm8	Kidney mass QTL 8	28.15		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	5	38011670	83011670	Rat
1331782	Rf36	Renal function QTL 36	3.296		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	39019942	102105896	Rat
6903292	Stl28	Serum triglyceride level QTL 28	2.6	0.0073	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	5	33311673	78311673	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	51657967	166600247	Rat
1578767	Stresp17	Stress response QTL 17	4.3	0.01	blood aldosterone amount (VT:0005346)	plasma aldosterone level (CMO:0000551)	5	32751649	77751649	Rat
1641922	Alcrsp8	Alcohol response QTL 8			alcohol metabolism trait (VT:0015089)	blood ethanol level (CMO:0000535)	5	17486080	62486080	Rat
1576312	Emca8	Estrogen-induced mammary cancer QTL 8	4.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	55124766	172190305	Rat
1641912	Alcrsp18	Alcohol response QTL 18			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	5	39985948	84985948	Rat
1576314	Eutr1	Estrogen induced uterine response QTL 1			uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	6922282	81330203	Rat
6903306	Scl35	Serum cholesterol QTL 35	2.6	0.0073	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	33311673	78311673	Rat
1576317	Eutr2	Estrogen induced uterine response QTL 2		0.01	uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	39526924	84526924	Rat
1331773	Scl26	Serum cholesterol level QTL 26	3.065		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	48523123	91770353	Rat
70189	Mcs5	Mammary carcinoma susceptibility QTL 5	10.51		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	60601597	137492949	Rat
1331771	Rf35	Renal function QTL 35	4.36965		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	10019064	91770353	Rat
61359	Eaex	Experimental allergic encephalomyelitis QTL x	3		nervous system integrity trait (VT:0010566)	post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)	5	60511627	105511627	Rat
8662454	Vetf3	Vascular elastic tissue fragility QTL 3	27.4		artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	5	7065535	74335773	Rat
2290448	Scl54	Serum cholesterol level QTL 54	2.93		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	36460764	136631402	Rat
1641903	Alcrsp3	Alcohol response QTL 3			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	5	17486080	62486080	Rat
1331756	Rf34	Renal function QTL 34	4.16275		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	10019064	87027358	Rat
8552954	Pigfal14	Plasma insulin-like growth factor 1 level QTL 14	9		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	26023211	71023211	Rat
2303577	Gluco47	Glucose level QTL 47	3		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	16520019	61520019	Rat
2316959	Gluco59	Glucose level QTL 59	4.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	56546393	101546393	Rat
1600358	Mamtr5	Mammary tumor resistance QTL 5			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	23671493	68671493	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	11	62	159	86	85	54	84	54	6	333	178	11	138	77	92	31	16	16

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001431166	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006225247	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238113	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593713	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593714	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593715	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602989	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602990	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602991	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111402	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC110488	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473962	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000035541 ⟹ ENSRNOP00000035304

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	61,357,940 - 61,399,379 (-)	Ensembl
mRatBN7.2 Ensembl	5	56,561,154 - 56,628,025 (-)	Ensembl
Rnor_6.0 Ensembl	5	57,780,389 - 57,845,509 (-)	Ensembl

RefSeq Acc Id:

XM_006238113 ⟹ XP_006238175

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	61,357,078 - 61,423,882 (-)	NCBI
mRatBN7.2	5	56,561,019 - 56,628,040 (-)	NCBI
Rnor_6.0	5	57,778,730 - 57,845,642 (-)	NCBI
Rnor_5.0	5	62,306,303 - 62,373,428 (-)	NCBI

Sequence:

show sequence

ATTGGCCCTTTAGAGGAGAGGGTGATAGGCCCTGTGAATGACCATTGGCGGGTTCTGCGGGACC
GCAGGCGGGCGGGCGACAGCGCGCGCGTTCGAACTGGCGCTTGGTGGCGTTGCCATAGAGATGT
GGCCTGGCGGACTCCTTAGGCGGGTTGACGGGACGCTCTGCTAGCCCGGCTTAGGGCTTTCTCC
TGACGGCACTAATTCTTCCGTCCTCCGAGAAACTGACTGAGGAGGAGCCGGGAAGGCCCTGAGA
GTTCATATAAACCTAATCACAAAAATGGCATCCTGGTTGTATGAGTGTCTTTGTGAAGCTGAGC
TTGCACAGTATTATCCTCATTTTACTGCGCTTGGCCTTCAAAAAATAGATGAATTAGCCAAGGT
TACAATGAAGGACTACTCCAGATTGGGAGTCCATGACATGAACGACCGCAAACGTCTTTTCCAA
CTCATCAAAATCATTAAGATTATGCAGGAGGATGATAAAGCCATCAGTAGCCCAGAGCATCCTC
TTCAAGCAAGAAGCCTGTACATCAAGCCTCAGGAATTCAGATCTGGGCCCCGAAGACAACTGCA
TTTTGATTCTCCTGACAGCAAAGACAAAATGGCCAGCAATGAAATGGGCAGTTTATCCGACTTC
TCTGTAAATGAGCAGAAGTCCACTTACCTAAAAGTGCCGGAGCACATGCTACCAGAGGATTCCC
AGTACCAGACCAAAATAAGAACCCCGGATGCTGCTGCTGCTGCTGCTGCTGGTGGTGGTGGTGG
TGGTGCTGCTGCTGCTGCTGCTGCTGCTGCTTACATGCAAACAGACATTAACGCTCCACTCTTT
GCATCAAATTACTTTTCTTCAAAACTGGGAAATTGTGATATCCCCGTTATTCAAAGAGTCTCTC
ATGTTTCAGGGTATAACTATGGACTCCCTCACTCCTGTGTCAGACAGATCACCTCAGAGAATCC
TTGGACTGAAATGGAGAAAATCAGAGTCTGTGTTCGAAAACGGCCTTTAGGTGTGAGGGAAGTA
CGCCGTGGAGAAGTTAATATCATTACTGTAGAAGATAAAGAGACTCTGCTTGTACATGAGAAAA
AAGAAGCAGTTGACCTTACACAATATATTCTTCAGCATGTTTTTTATTTCGATGAAGTCTTTGG
TGAGGCATGCAGCAATCAAGATGTGTACCTGAAGACCGCTCACCCCCTCATCCAGCACATTTTC
AGTGGAGGCAATGCCACTTGCTTTGCATATGGACAAACAGGTGCGGGGAAAACCTATACCATGA
TAGGAACTCATCAAAACCCAGGATTGTATGCTCTGGCTGCCAAAGATATCTTCAGGCAGCTGAA
AATATCCCAGTCAAGAAGGAATCTGTTTGTGTGGATCAGCTTCTATGAGATCTACTGTGGACAA
CTTTATGACCTCCTAAACAGAAGAAAACGGCTCTTTGCAAGAGAAGATAGCAAGCATGTGGTGC
AGATAGCTGGCCTTCGAGAGCTCCAAGTGGACAGTGTGGAGCTCCTCCTACAGGTGATCTTAAA
GGGCAGCAAGGAGCGCAGCACGGGGGCCACCAGCGTCAATGCAGACTCCTCCCGCTCCCATGCT
GTCATCCAAATTCAAATCAAGGATTCAGCCAAGAGGACATTTGGCAGGATCTCTTTCATTGACT
TGGCTGGGAGTGAGAGAGCAGCAGATGCCAGGGACTCAGACAGACAGACGAAGATGGAGGGCGC
AGAGATCAACCAGAGTCTTCTGGCTCTGAAAGAATGTATCCGAGCGCTGGACCAGGAACACACC
CACACGCCTTTCAGGCAGAGCAAACTGACCCAGGTCCTGAAGGACTCTTTCATTGGCGATGCCA
AAACTTGCATGATCGCCAACATCTCCCCAAGCCACATAGCCACAGAGCATACACTGAATACCTT
GCGCTACGCTGACCGGGTGAAGGAGCTGAAGAAGGGCCTGAAGTGCTGTGCTTCAGCTGCCAGT
CGGAATCAGACATCTGCAAACTCCTCTCCAAAACGAATTCAGAGCTCCCCTGTCACCCTGCCAG
GGGACAAGTGCTCCCCCAAAAAAGTTAAGCTGGGACTTCAGCAGTCACTTACCGTAGCCCCAGG
CCCCACAAGAGTTAAGGCTCACCCATTGGCCAGCCATGCTCCCAACATCCCCTTTGCCTCTGGA
CCAAAGGCCCCTGGTAAAAAGAGTAGCTCCCAAGGGAGTCCCACCCCAGAGTGGGACATGAAGG
GTAGCCCTCAAAGAGGAACCATGAGATCTGGCCATTTGACCAAAAAGGGGGCAGAGTCAGCACC
ATTGTGCTCTGAGAAAAGTCAAATTGGCAGCAAGATTGCTGTTGGGTGGGAGGGCAGAGCCTCG
GGCCCAAGAGAAGGTCTGCTACGTGTCAGGCTGCCTACAAGAGGGAAGAAGGTGCAGCCAGTAC
AGCCAGTACAGCCAGTGCAGAAGGAGCTGCTGTCCCGAGCTCGGCTCCTTGGTAACAGCCACCA
CTTAGAAACCACCCAGGATAGCAAGGTGGGCACACCTGCCGTGCTTGCCCCTGAAGCTTGGACA
AACCCTAGTCTGCAGCAGAAGGAAAGGGAGGAACATTTGCGATTTTACCATCAGCAGTTCCAGC
AGCCACCTCTCCTCAAGCAGAAGCTAAAGTACCAGCCACTGCAGAGGCTTTTGTGCCAGCACAG
ACCCTCAGAAGGTCAGCTCCAGAATGAGACTGTCTTTGCCCTCCATTCTAATCCTGAGAACCAT
GATGGAGCCCAGGCGGAGGACCTTGATGACAGTGATTTCAGTGAGGATTCTTTCTCACATGTCT
CCAGTCAGCCAACCATAAAAAAGAGGAGCACCTTGGAAAGGAGTGAAAGCTCCTTCTTCCTTCA
TCAGGACAGGGAGCATAGCCCTGAGAAACAGGCAGCAGAAAGGCAGCAATGTCTGCTTTTCAGC
TCTGAGGCGGACGGGAGTAAGAAGGGGCCAGCTGACAGCTGGGTGTATTCCAGGGACCCCATCA
TCAGCCACAGGAAAGGAGCCCTTGATCAGAGCCACAGCCCAAGTATGGTATGCTCAGACTGGAG
CAAGGAGGGAGACTCTGCCTCCTCAGGACCTTCTTCTCCTAAGGACAACTGGGCCGAGAAACCT
TCTTCACAGGTAGATTTCGTGCATCACAGAAAACCAGGTGAAGCTCAAGCCTTTGACATCAGAC
TGGAGGCCTTCAGAGACGAGGTCCCTGGACAAGCTGGGCCCGGCCTGGAAAATGAGCTGTCTTT
CCCACTGTCCCACGTGGCTGTTTCTGGATCCCCAGACCAGAGAGACAGAGTCTCCACACCATTA
AGAGAAGTGGGTGAAAACAGAGTGACTCGGACTCCAGAAACAGTGAACAGCACTACTCCTTTCC
AAGAAGACTCTAGAGAGCAGACACAATTGTGTTCTGCAAACGCTTCTGGACTCATGGCTCCTCT
CTCTATGTCCCTCCTGGAGACCCCCAGTCATGAGGACCTTTCTTCCTTGGAGCAAACTGCCCAG
GATAGAGCTGGTTATGGTTTCATGGCTGAGATGGTAGGAGGGCCAGCAGCGGGACACACAGTAT
CATCTTATGATCCAGAGGCTGCCTTGCCAGTGTCTTCAGCAACTGAGTGCCTATGGCTGTCTTC
ATCTCCCCCTGACAATCGGCCTAGTTGTGATCTTCCAGCTCTGTCCCCGTCACCCATCCATCAG
CATTCACCTGACAACTTGCCTAACAGGGAGGCCCGCCAGAACAGAAGGCCAACACTCTTGCCCC
AGAATCATGTGGATGGCGAGCCATATGATGACAATGCTGCAGAGATTGAACTGGGGGGCTCCTT
GACATTCCCCCGGAAGCCCTCCTCCAACATACACGCTGGAGTACCCTATTCTACACCTTTCCTC
ACCTCACATACAGGTACTAGTGATGGAGTTGGCCGTCCCTGGACCCAGGAGAGAAAACATCCTA
CAGGGGTTAGCTGGCAAGAGCTTGCTTCCTCCCTAGATTCCAACAAACTTCATTACAACGAGGA
CATTTCATGGCTCAGGCGCAAGCCAATCTCAAGGTGCTTAGAATCAGACTCTCCTTTGGTCCCC
AGCTGTTCTCCCAAGGCCTTGGGGACACTCTGTCCACTTACACCGGAGCAGGCACAGCAGGTGA
TCATCCGTGCACACCAAGAACAGCTGGATGAGATGGCTGAGCTGGACTTCAAGGAGGAGACCTT
AATGACCCAGATGGATTCTAATGATTTTGAAGAATTTGTGACCCAGCTGGATGAAATCATGGCT
TTGAAGTCCAAGTGCATCCAAAGTCTGAGAAGCCAGCTTCAGCTCTACCTCACCAGCCTCGGTC
CAGCTGCAGCCCCCAAGAGAACTGTGGTGTCTTAGAGGCAAACTCATCCTGGATGGACAGTGCG
TGTTCTCTGGGGCTGGAAGAGGCTCTGCCAGGGCCTTCCTGCCGTGCCCCTAGTGTTACCCTAA
CCATACATGGCCTTGGATGACCTCACTACTCGGGGACAGACCTCATCTTATCTCAGTTCCAACT
ACAGGGCCATCTGTAACAAAGTTCCAGGCTGAAAACCTTCATGTCCCCTTTTGTTTGGGGCTCA
GAGTAGTCACTTTGCCCACCTGTATCTGTAGGAACATACTTGGTCTAATAACATTGTAGATGTT
CCTAAATTTGAGGGTGGGACAGGGGTGTTTAATGTTAATGATGAGAGGTGAGAGGCTAGGGAGC
AAACTGAGCCAGTAGCTTTATTCTGATGGTGCCTTTCTGTACTTAAAAGACTACAGCACCAGTA
CCAGGCAGACAGTCAGGTAAACTCCTTCCCAGCAGAGAGTGGAGATTATAAAATGAACAACTCT
TGGTATCTTTCTTTAGAGCAACTGAGGTCTGAGGTATGCTTTATGTTTACGGTTTCCTGCCCTG
CAATCCAGCTTTGAGGGTGCCGACAGAAGCCCATGGACAGTGGCTATTAGCCCTCAAAGCCCTT
GTGGCAGATCCTAGCTCCTGTCCATGACCCAGTGCCTCTGAATGATTAGTCAGGCTGGAGGATC
TCAGGCAAATCCATTGCCTAGGCCTGAATCTTCCAGGGCACCCAGGCCAGCAGCACACAAGGGC
CTTTGCTATGGTGTCTTGGGACAGAGTCTACAGTCAGCAGTCTGAACCTTCTGACACAGCAGCA
GACACACAACTTTTCAAATGAGTTCTTGCTGTATTACTGGGGGCTGGGGTGGGGTGTCAGATGT
TATCAGGTACCTTATTTTAGAAACAAGTGTCTCACTGCTGATCTGCTCAGACTGATTAGCTAAC
AAGTCCCAGGGTCCTTCTTGTCTCTCCTTGTTCTCTATGTAGACCAACTCACAAAGATCCTCCT
GCCTCCCAAGTGCTAGGATTAAAGATGTAGCCACCATTATACCAAGCTAGTCCCGACTTTCCAC
AGTTACTAGAGATCCAACCTCAGTCCTCATGCTTACACCACAAGCACTTTACTGAATCACCTTT
TTAACAGAGACCCTCCAAGAGTCCATTAGGTCTCCCTGAGTTAACCTGAGATTCATGTGTCACA
GCCTAAGCCACAGAAATTTAAGGAGAACTCTGGTTTTAGGATGTTACATCTAAAAAGCCAAGAT
AAGCCAGATGTGGCATTGTTCATCTGTAATCCCAGCATTTGGGATGCTGAGGCAGAATGAGGAC
TATAAATTCAAAGACAACCTGGACTACATAGTGAAATAATGGTATTATTAAGCCAAAGGCTAAT
TCAAAAGAGCTGAAAAGCTACAGTCTGCCAGCCACAGGCAGTTGCTTGAATTGACCACCAGGTG
GCAGCCTGTTCCTAGGCTGTATAGCCTCTCACATTGCTAAGACCCAGAGACCATTCTCAGACTG
CCAAAAGGATGTGTGTGGATTCTACTAGAGGTAAAGACTAGAAACTTTAGGGATGAGCTATCAG
CTGCAGGAGCACCACTGTAACCTTGCCTGTGACTGGTAGTATTCACAAGCAAAAGGATTTGTCA
ACTTTTAAAGGGTACCTGTATGCCCCTTCTCTACTTTGGCAAGAGAGCACATACCCTTCTTCCA
CAGACTGCACTATAGACCAGGTTTAAATAACTCTTTGGGTCTCTATTTGTAAGCCAAAAAACTT
ATGGGAGCTTCCAGGTCCCATAGGCCCTCCGTGAGAAAAGGATACCAATCTACCCACTGTTCTG
AGTCAAAATTTGTCCAAATAAAGAGGTTAAAGCAGCA

hide sequence

RefSeq Acc Id:

XM_017593713 ⟹ XP_017449202

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	61,357,078 - 61,423,882 (-)	NCBI
mRatBN7.2	5	56,561,019 - 56,628,040 (-)	NCBI
Rnor_6.0	5	57,778,730 - 57,845,642 (-)	NCBI

Sequence:

show sequence

ATTGGCCCTTTAGAGGAGAGGGTGATAGGCCCTGTGAATGACCATTGGCGGGTTCTGCGGGACC
GCAGGCGGGCGGGCGACAGCGCGCGCGTTCGAACTGGCGCTTGGTGGCGTTGCCATAGAGATGT
GGCCTGGCGGACTCCTTAGGCGGGTTGACGGGACGCTCTGCTAGCCCGGCTTAGGGCTTTCTCC
TGACGGCACTAATTCTTCCGTCCTCCGAGAAACTGACTGAGGAGGAGCCGGGAAGGCCCTGAGA
CAGAGCTTTTATTGAATCTGGCACAGGATCTTTGTGGAACTTTGAGATTCAGCCAGTCTGGCTG
CCAGCGACTTCTGAGTGCCTCCTGTCTGCACTCCAGCACTCACATTGCAGTCACACACGACCAA
CCACGCTTGCCTTTTCTTCTTAAGGGGATCAAATTTAGATCTTCAGGCTTAGTTCATATAAACC
TAATCACAAAAATGGCATCCTGGTTGTATGAGTGTCTTTGTGAAGCTGAGCTTGCACAGTATTA
TCCTCATTTTACTGCGCTTGGCCTTCAAAAAATAGATGAATTAGCCAAGGTTACAATGAAGGAC
TACTCCAGATTGGGAGTCCATGACATGAACGACCGCAAACGTCTTTTCCAACTCATCAAAATCA
TTAAGATTATGCAGGAGGATGATAAAGCCATCAGTAGCCCAGAGCATCCTCTTCAAGCAAGAAG
CCTGTACATCAAGCCTCAGGAATTCAGATCTGGGCCCCGAAGACAACTGCATTTTGATTCTCCT
GACAGCAAAGACAAAATGGCCAGCAATGAAATGGGCAGTTTATCCGACTTCTCTGTAAATGAGC
AGAAGTCCACTTACCTAAAAGTGCCGGAGCACATGCTACCAGAGGATTCCCAGTACCAGACCAA
AATAAGAACCCCGGATGCTGCTGCTGCTGCTGCTGCTGGTGGTGGTGGTGGTGGTGCTGCTGCT
GCTGCTGCTGCTGCTGCTTACATGCAAACAGACATTAACGCTCCACTCTTTGCATCAAATTACT
TTTCTTCAAAACTGGGAAATTGTGATATCCCCGTTATTCAAAGAGTCTCTCATGTTTCAGGGTA
TAACTATGGACTCCCTCACTCCTGTGTCAGACAGATCACCTCAGAGAATCCTTGGACTGAAATG
GAGAAAATCAGAGTCTGTGTTCGAAAACGGCCTTTAGGTGTGAGGGAAGTACGCCGTGGAGAAG
TTAATATCATTACTGTAGAAGATAAAGAGACTCTGCTTGTACATGAGAAAAAAGAAGCAGTTGA
CCTTACACAATATATTCTTCAGCATGTTTTTTATTTCGATGAAGTCTTTGGTGAGGCATGCAGC
AATCAAGATGTGTACCTGAAGACCGCTCACCCCCTCATCCAGCACATTTTCAGTGGAGGCAATG
CCACTTGCTTTGCATATGGACAAACAGGTGCGGGGAAAACCTATACCATGATAGGAACTCATCA
AAACCCAGGATTGTATGCTCTGGCTGCCAAAGATATCTTCAGGCAGCTGAAAATATCCCAGTCA
AGAAGGAATCTGTTTGTGTGGATCAGCTTCTATGAGATCTACTGTGGACAACTTTATGACCTCC
TAAACAGAAGAAAACGGCTCTTTGCAAGAGAAGATAGCAAGCATGTGGTGCAGATAGCTGGCCT
TCGAGAGCTCCAAGTGGACAGTGTGGAGCTCCTCCTACAGGTGATCTTAAAGGGCAGCAAGGAG
CGCAGCACGGGGGCCACCAGCGTCAATGCAGACTCCTCCCGCTCCCATGCTGTCATCCAAATTC
AAATCAAGGATTCAGCCAAGAGGACATTTGGCAGGATCTCTTTCATTGACTTGGCTGGGAGTGA
GAGAGCAGCAGATGCCAGGGACTCAGACAGACAGACGAAGATGGAGGGCGCAGAGATCAACCAG
AGTCTTCTGGCTCTGAAAGAATGTATCCGAGCGCTGGACCAGGAACACACCCACACGCCTTTCA
GGCAGAGCAAACTGACCCAGGTCCTGAAGGACTCTTTCATTGGCGATGCCAAAACTTGCATGAT
CGCCAACATCTCCCCAAGCCACATAGCCACAGAGCATACACTGAATACCTTGCGCTACGCTGAC
CGGGTGAAGGAGCTGAAGAAGGGCCTGAAGTGCTGTGCTTCAGCTGCCAGTCGGAATCAGACAT
CTGCAAACTCCTCTCCAAAACGAATTCAGAGCTCCCCTGTCACCCTGCCAGGGGACAAGTGCTC
CCCCAAAAAAGTTAAGCTGGGACTTCAGCAGTCACTTACCGTAGCCCCAGGCCCCACAAGAGTT
AAGGCTCACCCATTGGCCAGCCATGCTCCCAACATCCCCTTTGCCTCTGGACCAAAGGCCCCTG
GTAAAAAGAGTAGCTCCCAAGGGAGTCCCACCCCAGAGTGGGACATGAAGGGTAGCCCTCAAAG
AGGAACCATGAGATCTGGCCATTTGACCAAAAAGGGGGCAGAGTCAGCACCATTGTGCTCTGAG
AAAAGTCAAATTGGCAGCAAGATTGCTGTTGGGTGGGAGGGCAGAGCCTCGGGCCCAAGAGAAG
GTCTGCTACGTGTCAGGCTGCCTACAAGAGGGAAGAAGGTGCAGCCAGTACAGCCAGTACAGCC
AGTGCAGAAGGAGCTGCTGTCCCGAGCTCGGCTCCTTGGTAACAGCCACCACTTAGAAACCACC
CAGGATAGCAAGGTGGGCACACCTGCCGTGCTTGCCCCTGAAGCTTGGACAAACCCTAGTCTGC
AGCAGAAGGAAAGGGAGGAACATTTGCGATTTTACCATCAGCAGTTCCAGCAGCCACCTCTCCT
CAAGCAGAAGCTAAAGTACCAGCCACTGCAGAGGCTTTTGTGCCAGCACAGACCCTCAGAAGGT
CAGCTCCAGAATGAGACTGTCTTTGCCCTCCATTCTAATCCTGAGAACCATGATGGAGCCCAGG
CGGAGGACCTTGATGACAGTGATTTCAGTGAGGATTCTTTCTCACATGTCTCCAGTCAGCCAAC
CATAAAAAAGAGGAGCACCTTGGAAAGGAGTGAAAGCTCCTTCTTCCTTCATCAGGACAGGGAG
CATAGCCCTGAGAAACAGGCAGCAGAAAGGCAGCAATGTCTGCTTTTCAGCTCTGAGGCGGACG
GGAGTAAGAAGGGGCCAGCTGACAGCTGGGTGTATTCCAGGGACCCCATCATCAGCCACAGGAA
AGGAGCCCTTGATCAGAGCCACAGCCCAAGTATGGTATGCTCAGACTGGAGCAAGGAGGGAGAC
TCTGCCTCCTCAGGACCTTCTTCTCCTAAGGACAACTGGGCCGAGAAACCTTCTTCACAGGTAG
ATTTCGTGCATCACAGAAAACCAGGTGAAGCTCAAGCCTTTGACATCAGACTGGAGGCCTTCAG
AGACGAGGTCCCTGGACAAGCTGGGCCCGGCCTGGAAAATGAGCTGTCTTTCCCACTGTCCCAC
GTGGCTGTTTCTGGATCCCCAGACCAGAGAGACAGAGTCTCCACACCATTAAGAGAAGTGGGTG
AAAACAGAGTGACTCGGACTCCAGAAACAGTGAACAGCACTACTCCTTTCCAAGAAGACTCTAG
AGAGCAGACACAATTGTGTTCTGCAAACGCTTCTGGACTCATGGCTCCTCTCTCTATGTCCCTC
CTGGAGACCCCCAGTCATGAGGACCTTTCTTCCTTGGAGCAAACTGCCCAGGATAGAGCTGGTT
ATGGTTTCATGGCTGAGATGGTAGGAGGGCCAGCAGCGGGACACACAGTATCATCTTATGATCC
AGAGGCTGCCTTGCCAGTGTCTTCAGCAACTGAGTGCCTATGGCTGTCTTCATCTCCCCCTGAC
AATCGGCCTAGTTGTGATCTTCCAGCTCTGTCCCCGTCACCCATCCATCAGCATTCACCTGACA
ACTTGCCTAACAGGGAGGCCCGCCAGAACAGAAGGCCAACACTCTTGCCCCAGAATCATGTGGA
TGGCGAGCCATATGATGACAATGCTGCAGAGATTGAACTGGGGGGCTCCTTGACATTCCCCCGG
AAGCCCTCCTCCAACATACACGCTGGAGTACCCTATTCTACACCTTTCCTCACCTCACATACAG
GTACTAGTGATGGAGTTGGCCGTCCCTGGACCCAGGAGAGAAAACATCCTACAGGGGTTAGCTG
GCAAGAGCTTGCTTCCTCCCTAGATTCCAACAAACTTCATTACAACGAGGACATTTCATGGCTC
AGGCGCAAGCCAATCTCAAGGTGCTTAGAATCAGACTCTCCTTTGGTCCCCAGCTGTTCTCCCA
AGGCCTTGGGGACACTCTGTCCACTTACACCGGAGCAGGCACAGCAGGTGATCATCCGTGCACA
CCAAGAACAGCTGGATGAGATGGCTGAGCTGGACTTCAAGGAGGAGACCTTAATGACCCAGATG
GATTCTAATGATTTTGAAGAATTTGTGACCCAGCTGGATGAAATCATGGCTTTGAAGTCCAAGT
GCATCCAAAGTCTGAGAAGCCAGCTTCAGCTCTACCTCACCAGCCTCGGTCCAGCTGCAGCCCC
CAAGAGAACTGTGGTGTCTTAGAGGCAAACTCATCCTGGATGGACAGTGCGTGTTCTCTGGGGC
TGGAAGAGGCTCTGCCAGGGCCTTCCTGCCGTGCCCCTAGTGTTACCCTAACCATACATGGCCT
TGGATGACCTCACTACTCGGGGACAGACCTCATCTTATCTCAGTTCCAACTACAGGGCCATCTG
TAACAAAGTTCCAGGCTGAAAACCTTCATGTCCCCTTTTGTTTGGGGCTCAGAGTAGTCACTTT
GCCCACCTGTATCTGTAGGAACATACTTGGTCTAATAACATTGTAGATGTTCCTAAATTTGAGG
GTGGGACAGGGGTGTTTAATGTTAATGATGAGAGGTGAGAGGCTAGGGAGCAAACTGAGCCAGT
AGCTTTATTCTGATGGTGCCTTTCTGTACTTAAAAGACTACAGCACCAGTACCAGGCAGACAGT
CAGGTAAACTCCTTCCCAGCAGAGAGTGGAGATTATAAAATGAACAACTCTTGGTATCTTTCTT
TAGAGCAACTGAGGTCTGAGGTATGCTTTATGTTTACGGTTTCCTGCCCTGCAATCCAGCTTTG
AGGGTGCCGACAGAAGCCCATGGACAGTGGCTATTAGCCCTCAAAGCCCTTGTGGCAGATCCTA
GCTCCTGTCCATGACCCAGTGCCTCTGAATGATTAGTCAGGCTGGAGGATCTCAGGCAAATCCA
TTGCCTAGGCCTGAATCTTCCAGGGCACCCAGGCCAGCAGCACACAAGGGCCTTTGCTATGGTG
TCTTGGGACAGAGTCTACAGTCAGCAGTCTGAACCTTCTGACACAGCAGCAGACACACAACTTT
TCAAATGAGTTCTTGCTGTATTACTGGGGGCTGGGGTGGGGTGTCAGATGTTATCAGGTACCTT
ATTTTAGAAACAAGTGTCTCACTGCTGATCTGCTCAGACTGATTAGCTAACAAGTCCCAGGGTC
CTTCTTGTCTCTCCTTGTTCTCTATGTAGACCAACTCACAAAGATCCTCCTGCCTCCCAAGTGC
TAGGATTAAAGATGTAGCCACCATTATACCAAGCTAGTCCCGACTTTCCACAGTTACTAGAGAT
CCAACCTCAGTCCTCATGCTTACACCACAAGCACTTTACTGAATCACCTTTTTAACAGAGACCC
TCCAAGAGTCCATTAGGTCTCCCTGAGTTAACCTGAGATTCATGTGTCACAGCCTAAGCCACAG
AAATTTAAGGAGAACTCTGGTTTTAGGATGTTACATCTAAAAAGCCAAGATAAGCCAGATGTGG
CATTGTTCATCTGTAATCCCAGCATTTGGGATGCTGAGGCAGAATGAGGACTATAAATTCAAAG
ACAACCTGGACTACATAGTGAAATAATGGTATTATTAAGCCAAAGGCTAATTCAAAAGAGCTGA
AAAGCTACAGTCTGCCAGCCACAGGCAGTTGCTTGAATTGACCACCAGGTGGCAGCCTGTTCCT
AGGCTGTATAGCCTCTCACATTGCTAAGACCCAGAGACCATTCTCAGACTGCCAAAAGGATGTG
TGTGGATTCTACTAGAGGTAAAGACTAGAAACTTTAGGGATGAGCTATCAGCTGCAGGAGCACC
ACTGTAACCTTGCCTGTGACTGGTAGTATTCACAAGCAAAAGGATTTGTCAACTTTTAAAGGGT
ACCTGTATGCCCCTTCTCTACTTTGGCAAGAGAGCACATACCCTTCTTCCACAGACTGCACTAT
AGACCAGGTTTAAATAACTCTTTGGGTCTCTATTTGTAAGCCAAAAAACTTATGGGAGCTTCCA
GGTCCCATAGGCCCTCCGTGAGAAAAGGATACCAATCTACCCACTGTTCTGAGTCAAAATTTGT
CCAAATAAAGAGGTTAAAGCAGCA

hide sequence

RefSeq Acc Id:

XM_039111402 ⟹ XP_038967330

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	61,357,078 - 61,423,882 (-)	NCBI
mRatBN7.2	5	56,561,019 - 56,628,040 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001418095	(Get FASTA)	NCBI Sequence Viewer
	XP_006238175	(Get FASTA)	NCBI Sequence Viewer
	XP_017449202	(Get FASTA)	NCBI Sequence Viewer
	XP_038967330	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL98667	(Get FASTA)	NCBI Sequence Viewer
	EDL98668	(Get FASTA)	NCBI Sequence Viewer
	EDL98669	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000035304
	ENSRNOP00000035304.4

RefSeq Acc Id:

XP_006238175 ⟸ XM_006238113

- Peptide Label:

isoform X1

- Sequence:

show sequence

MASWLYECLCEAELAQYYPHFTALGLQKIDELAKVTMKDYSRLGVHDMNDRKRLFQLIKIIKIM
QEDDKAISSPEHPLQARSLYIKPQEFRSGPRRQLHFDSPDSKDKMASNEMGSLSDFSVNEQKST
YLKVPEHMLPEDSQYQTKIRTPDAAAAAAAGGGGGGAAAAAAAAAYMQTDINAPLFASNYFSSK
LGNCDIPVIQRVSHVSGYNYGLPHSCVRQITSENPWTEMEKIRVCVRKRPLGVREVRRGEVNII
TVEDKETLLVHEKKEAVDLTQYILQHVFYFDEVFGEACSNQDVYLKTAHPLIQHIFSGGNATCF
AYGQTGAGKTYTMIGTHQNPGLYALAAKDIFRQLKISQSRRNLFVWISFYEIYCGQLYDLLNRR
KRLFAREDSKHVVQIAGLRELQVDSVELLLQVILKGSKERSTGATSVNADSSRSHAVIQIQIKD
SAKRTFGRISFIDLAGSERAADARDSDRQTKMEGAEINQSLLALKECIRALDQEHTHTPFRQSK
LTQVLKDSFIGDAKTCMIANISPSHIATEHTLNTLRYADRVKELKKGLKCCASAASRNQTSANS
SPKRIQSSPVTLPGDKCSPKKVKLGLQQSLTVAPGPTRVKAHPLASHAPNIPFASGPKAPGKKS
SSQGSPTPEWDMKGSPQRGTMRSGHLTKKGAESAPLCSEKSQIGSKIAVGWEGRASGPREGLLR
VRLPTRGKKVQPVQPVQPVQKELLSRARLLGNSHHLETTQDSKVGTPAVLAPEAWTNPSLQQKE
REEHLRFYHQQFQQPPLLKQKLKYQPLQRLLCQHRPSEGQLQNETVFALHSNPENHDGAQAEDL
DDSDFSEDSFSHVSSQPTIKKRSTLERSESSFFLHQDREHSPEKQAAERQQCLLFSSEADGSKK
GPADSWVYSRDPIISHRKGALDQSHSPSMVCSDWSKEGDSASSGPSSPKDNWAEKPSSQVDFVH
HRKPGEAQAFDIRLEAFRDEVPGQAGPGLENELSFPLSHVAVSGSPDQRDRVSTPLREVGENRV
TRTPETVNSTTPFQEDSREQTQLCSANASGLMAPLSMSLLETPSHEDLSSLEQTAQDRAGYGFM
AEMVGGPAAGHTVSSYDPEAALPVSSATECLWLSSSPPDNRPSCDLPALSPSPIHQHSPDNLPN
REARQNRRPTLLPQNHVDGEPYDDNAAEIELGGSLTFPRKPSSNIHAGVPYSTPFLTSHTGTSD
GVGRPWTQERKHPTGVSWQELASSLDSNKLHYNEDISWLRRKPISRCLESDSPLVPSCSPKALG
TLCPLTPEQAQQVIIRAHQEQLDEMAELDFKEETLMTQMDSNDFEEFVTQLDEIMALKSKCIQS
LRSQLQLYLTSLGPAAAPKRTVVS

hide sequence

RefSeq Acc Id:	XP_017449202 ⟸ XM_017593713
- Peptide Label:	isoform X1
- UniProtKB:	D4A7G8 (UniProtKB/TrEMBL), A6IIU8 (UniProtKB/TrEMBL), A6IIU7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASWLYECLCEAELAQYYPHFTALGLQKIDELAKVTMKDYSRLGVHDMNDRKRLFQLIKIIKIM QEDDKAISSPEHPLQARSLYIKPQEFRSGPRRQLHFDSPDSKDKMASNEMGSLSDFSVNEQKST YLKVPEHMLPEDSQYQTKIRTPDAAAAAAAGGGGGGAAAAAAAAAYMQTDINAPLFASNYFSSK LGNCDIPVIQRVSHVSGYNYGLPHSCVRQITSENPWTEMEKIRVCVRKRPLGVREVRRGEVNII TVEDKETLLVHEKKEAVDLTQYILQHVFYFDEVFGEACSNQDVYLKTAHPLIQHIFSGGNATCF AYGQTGAGKTYTMIGTHQNPGLYALAAKDIFRQLKISQSRRNLFVWISFYEIYCGQLYDLLNRR KRLFAREDSKHVVQIAGLRELQVDSVELLLQVILKGSKERSTGATSVNADSSRSHAVIQIQIKD SAKRTFGRISFIDLAGSERAADARDSDRQTKMEGAEINQSLLALKECIRALDQEHTHTPFRQSK LTQVLKDSFIGDAKTCMIANISPSHIATEHTLNTLRYADRVKELKKGLKCCASAASRNQTSANS SPKRIQSSPVTLPGDKCSPKKVKLGLQQSLTVAPGPTRVKAHPLASHAPNIPFASGPKAPGKKS SSQGSPTPEWDMKGSPQRGTMRSGHLTKKGAESAPLCSEKSQIGSKIAVGWEGRASGPREGLLR VRLPTRGKKVQPVQPVQPVQKELLSRARLLGNSHHLETTQDSKVGTPAVLAPEAWTNPSLQQKE REEHLRFYHQQFQQPPLLKQKLKYQPLQRLLCQHRPSEGQLQNETVFALHSNPENHDGAQAEDL DDSDFSEDSFSHVSSQPTIKKRSTLERSESSFFLHQDREHSPEKQAAERQQCLLFSSEADGSKK GPADSWVYSRDPIISHRKGALDQSHSPSMVCSDWSKEGDSASSGPSSPKDNWAEKPSSQVDFVH HRKPGEAQAFDIRLEAFRDEVPGQAGPGLENELSFPLSHVAVSGSPDQRDRVSTPLREVGENRV TRTPETVNSTTPFQEDSREQTQLCSANASGLMAPLSMSLLETPSHEDLSSLEQTAQDRAGYGFM AEMVGGPAAGHTVSSYDPEAALPVSSATECLWLSSSPPDNRPSCDLPALSPSPIHQHSPDNLPN REARQNRRPTLLPQNHVDGEPYDDNAAEIELGGSLTFPRKPSSNIHAGVPYSTPFLTSHTGTSD GVGRPWTQERKHPTGVSWQELASSLDSNKLHYNEDISWLRRKPISRCLESDSPLVPSCSPKALG TLCPLTPEQAQQVIIRAHQEQLDEMAELDFKEETLMTQMDSNDFEEFVTQLDEIMALKSKCIQS LRSQLQLYLTSLGPAAAPKRTVVS hide sequence

Ensembl Acc Id:

ENSRNOP00000035304 ⟸ ENSRNOT00000035541

RefSeq Acc Id:	XP_038967330 ⟸ XM_039111402
- Peptide Label:	isoform X2
- UniProtKB:	A6IIU7 (UniProtKB/TrEMBL)

Protein Domains

Kinesin motor SAM

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A7G8-F1-model_v2	AlphaFold	D4A7G8	1-1368	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13693660

Promoter ID:

EPDNEW_R4174

Type:

single initiation site

Name:

Kif24_1

Description:

kinesin family member 24

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	57,845,524 - 57,845,584	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307723	AgrOrtholog
BioCyc Gene	G2FUF-41561	BioCyc
Ensembl Genes	ENSRNOG00000012735	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000035541	ENTREZGENE
	ENSRNOT00000035541.7	UniProtKB/TrEMBL
Gene3D-CATH	1.10.150.50	UniProtKB/TrEMBL
	3.40.850.10	UniProtKB/TrEMBL
InterPro	Kinesin-like_fam	UniProtKB/TrEMBL
	Kinesin_motor_CS	UniProtKB/TrEMBL
	Kinesin_motor_dom	UniProtKB/TrEMBL
	Kinesin_motor_dom_sf	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
	SAM	UniProtKB/TrEMBL
	SAM_type	UniProtKB/TrEMBL
KEGG Report	rno:313170	UniProtKB/TrEMBL
NCBI Gene	313170	ENTREZGENE
PANTHER	KINESIN-LIKE PROTEIN KIF24	UniProtKB/TrEMBL
	KINESIN-RELATED PROTEIN 6	UniProtKB/TrEMBL
Pfam	Kinesin	UniProtKB/TrEMBL
	SAM_1	UniProtKB/TrEMBL
PhenoGen	Kif24	PhenoGen
PRINTS	KINESINHEAVY	UniProtKB/TrEMBL
PROSITE	KINESIN_MOTOR_DOMAIN1	UniProtKB/TrEMBL
	KINESIN_MOTOR_DOMAIN2	UniProtKB/TrEMBL
	SAM_DOMAIN	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000012735	RatGTEx
SMART	KISc	UniProtKB/TrEMBL
Superfamily-SCOP	SAM_homology	UniProtKB/TrEMBL
	SSF52540	UniProtKB/TrEMBL
UniProt	A6IIU7	ENTREZGENE, UniProtKB/TrEMBL
	A6IIU8	ENTREZGENE, UniProtKB/TrEMBL
	D4A7G8	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-07	Kif24	kinesin family member 24	RGD1307723_predicted	similar to CG1453-PA (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	RGD1307723_predicted	similar to CG1453-PA (predicted)	LOC313170_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC313170_predicted	similar to CG1453-PA (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar