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Gene: Zfp131 (zinc finger protein 131) Rattus norvegicus

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Symbol:

Zfp131

Name:

zinc finger protein 131

RGD ID:

1307638

Description:

Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific; DNA-binding transcription repressor activity, RNA polymerase II-specific; and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of cytokine production; regulation of immune system process; and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be active in nucleoplasm. Orthologous to human ZNF131 (zinc finger protein 131); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC310375

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ZNF131 (zinc finger protein 131)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Zfp131 (zinc finger protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Znf131 (zinc finger protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ZNF131 (zinc finger protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ZNF131 (zinc finger protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Znf131 (zinc finger protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ZNF131 (zinc finger protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ZNF131 (zinc finger protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Znf131 (zinc finger protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Znf131 (zinc finger protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Zfp131 (zinc finger protein 131)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	ZNF131 (zinc finger protein 131)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	znf131 (zinc finger protein 131)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	znf131	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	53,457,893 - 53,486,348 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	53,458,515 - 53,485,285 (-)	Ensembl				GRCr8
mRatBN7.2	2	51,722,774 - 51,753,662 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	51,725,541 - 51,753,639 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	2	58,842,881 - 58,869,784 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	56,901,608 - 56,928,508 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	51,835,564 - 51,862,476 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	52,503,185 - 52,532,097 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	52,504,315 - 52,531,085 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	2	70,867,488 - 70,895,803 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	51,817,650 - 51,844,634 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	47,380,536 - 47,407,328 (-)	NCBI		Celera
RGSC_v3.1	2	51,745,367 - 51,773,433 (-)	NCBI
Cytogenetic Map	2	q15-q16	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (ISO)

all-trans-retinoic acid (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

copper atom (EXP)

copper(0) (EXP)

cyclosporin A (ISO)

deguelin (ISO)

dicrotophos (ISO)

doxorubicin (ISO)

elemental selenium (ISO)

entinostat (ISO)

fenthion (ISO)

folic acid (ISO)

formaldehyde (ISO)

hydrogen peroxide (ISO)

maneb (ISO)

methylmercury chloride (ISO)

paracetamol (EXP,ISO)

paraquat (ISO)

phenethyl isothiocyanate (EXP)

phenytoin (EXP)

resveratrol (ISO)

selenium atom (ISO)

silicon dioxide (ISO)

silver atom (ISO)

silver(0) (ISO)

Soman (EXP)

tetrachloromethane (ISO)

thioacetamide (EXP)

triphenyl phosphate (ISO)

urethane (ISO)

valproic acid (ISO)

vitamin E (ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of transcription by RNA polymerase II (IBA)

positive regulation of transcription by RNA polymerase II (IEA,ISO)

regulation of cytokine production (IBA)

regulation of immune system process (IBA)

Cellular Component

intermediate filament cytoskeleton (IEA,ISO)

nucleoplasm (IBA,IEA,ISO)

nucleus (IEA)

Molecular Function

DNA binding (IEA)

DNA-binding transcription activator activity, RNA polymerase II-specific (IEA,ISO)

DNA-binding transcription repressor activity, RNA polymerase II-specific (IBA)

metal ion binding (IEA)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA)

sequence-specific DNA binding (IEA,ISO)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	GOA pipeline	RGD automated data pipeline
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:20303951

Genomics

Comparative Map Data

Zfp131
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	53,457,893 - 53,486,348 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	53,458,515 - 53,485,285 (-)	Ensembl				GRCr8
mRatBN7.2	2	51,722,774 - 51,753,662 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	51,725,541 - 51,753,639 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	2	58,842,881 - 58,869,784 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	56,901,608 - 56,928,508 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	51,835,564 - 51,862,476 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	52,503,185 - 52,532,097 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	52,504,315 - 52,531,085 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	2	70,867,488 - 70,895,803 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	51,817,650 - 51,844,634 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	47,380,536 - 47,407,328 (-)	NCBI		Celera
RGSC_v3.1	2	51,745,367 - 51,773,433 (-)	NCBI
Cytogenetic Map	2	q15-q16	NCBI

ZNF131
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	43,120,914 - 43,176,324 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	43,065,176 - 43,192,021 (+)	Ensembl			hg38	GRCh38
GRCh37	5	43,121,016 - 43,176,426 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	43,157,399 - 43,211,593 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	5	43,012,883 - 43,067,075 (+)	NCBI		Celera
Cytogenetic Map	5	p12	NCBI
HuRef	5	43,072,199 - 43,126,538 (+)	NCBI		HuRef
CHM1_1	5	43,122,676 - 43,176,938 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	43,373,818 - 43,429,219 (+)	NCBI		T2T-CHM13v2.0

Zfp131
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	120,226,722 - 120,253,070 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	120,226,723 - 120,252,425 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	13	119,765,186 - 119,791,477 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	119,765,187 - 119,790,889 (-)	Ensembl			mm10	GRCm38
Celera	13	124,146,114 - 124,171,617 (-)	NCBI		Celera
Cytogenetic Map	13	D2.3	NCBI

Znf131
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955446	19,065,927 - 19,106,456 (-)	Ensembl
ChiLan1.0	NW_004955446	19,066,902 - 19,106,458 (-)	NCBI	ChiLan1.0	ChiLan1.0

ZNF131
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	67,156,124 - 67,211,551 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	65,309,746 - 65,365,018 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	67,205,632 - 67,258,461 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	72,251,391 - 72,305,812 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	72,251,391 - 72,305,772 (-)	Ensembl			panPan2	panpan1.1

ZNF131
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	66,738,301 - 66,769,015 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	66,739,148 - 66,769,075 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	66,499,412 - 66,530,539 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	67,230,060 - 67,261,190 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	67,230,140 - 67,260,562 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	66,990,565 - 67,021,905 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	67,119,736 - 67,150,860 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	67,656,051 - 67,687,181 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Znf131
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	210,018,310 - 210,048,120 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936480	18,954,803 - 18,984,552 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936480	18,954,805 - 18,984,606 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZNF131
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	27,813,997 - 27,846,942 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	16	27,813,974 - 27,846,872 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	16	29,348,274 - 29,357,099 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZNF131
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	4	41,907,302 - 41,961,896 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	4	41,908,115 - 41,962,352 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666071	32,358,404 - 32,415,433 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Znf131
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624759	11,935,812 - 11,979,116 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Znf131
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	3	177,121,352 - 177,149,763 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Zfp131
104 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	435
Count of miRNA genes:	244
Interacting mature miRNAs:	293
Transcripts:	ENSRNOT00000021608
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10755430	Coatc6	Coat color QTL 6		0.02576	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	2	13325041	58325041	Rat
7387318	Stl32	Serum triglyceride level QTL 32	3.2	0.0003	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	2	24117813	69117813	Rat
10755436	Coatc8	Coat color QTL 8		0.02431	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	2	36750344	81750344	Rat
1298074	Bp164	Blood pressure QTL 164		0.003	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	44537979	205135428	Rat
10755499	Bp389	Blood pressure QTL 389	2.61		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	20695736	231474293	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	206613235	Rat
1300160	Hrtrt3	Heart rate QTL 3	3.62		heart pumping trait (VT:2000009)	absolute change in heart rate (CMO:0000534)	2	35614083	53462005	Rat
1579916	Bp270	Blood pressure QTL 270		0.003	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	16051883	61051883	Rat
731167	Glom4	Glomerulus QTL 4	2.4	0.0082	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	2	22038044	67038044	Rat
731166	Mamtr2	Mammary tumor resistance QTL 2		0.0001	mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	2	9623581	54623581	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	206613235	Rat
152025242	Bw191	Body weight QTL 191	3.62		body mass (VT:0001259)		2	40306867	124537199	Rat
1302794	Stl27	Serum triglyceride level QTL 27	4.4	0.0001	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	2	27148328	145807373	Rat
9590095	Sffal3	Serum free fatty acids level QTL 3	6.78	0.001	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	2	28889991	73889991	Rat
70174	BpQTLCluster2	Blood pressure QTL cluster 2	4.24		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	2	41801363	104744824	Rat
1331764	Bp205	Blood pressure QTL 205	3.476		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	14368707	59368707	Rat
1358901	Cm38	Cardiac mass QTL 38	2		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	159440891	Rat
631208	Bw1	Body weight QTL1	5.09		mesenteric fat pad mass (VT:0010427)	mesenteric fat pad weight to body weight ratio (CMO:0000654)	2	44904355	85286097	Rat
1331760	Bp206	Blood pressure QTL 206	3.62454		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	4265106	205135428	Rat
1358899	Kidm23	Kidney mass QTL 23	3.88		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	27148328	159440891	Rat
1358908	Bw49	Body weight QTL 49	3.36		body mass (VT:0001259)	body weight (CMO:0000012)	2	27148557	159440760	Rat
1300155	Bp174	Blood pressure QTL 174	4.09		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	2	44537979	112567334	Rat
2293835	Kiddil5	Kidney dilation QTL 5	3.8		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	44537979	159440891	Rat
1358910	Kidm27	Kidney mass QTL 27	5.77		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	27148328	159440891	Rat
61355	Bp36	Blood pressure QTL 36	2.9		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	2	7605533	104774005	Rat
1358911	Kidm28	Kidney mass QTL 28	5.42		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	27148328	159440891	Rat
631266	Bp132	Blood pressure QTL 132		0.0005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	47856345	205135428	Rat
1358904	Cm39	Cardiac mass QTL 39	2.26		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	27148328	159440891	Rat
1354617	Bp240	Blood pressure QTL 240	4		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	28652666	83465677	Rat
1359034	Bp274	Blood pressure QTL 274			arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	51266859	96266859	Rat
2293843	Kiddil6	Kidney dilation QTL 6	3.1		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	44537979	184731399	Rat
1358887	Bw50	Body weight QTL 50	2.39		body mass (VT:0001259)	body weight (CMO:0000012)	2	27148557	159440760	Rat
2306903	Bp336	Blood pressure QTL 336		0.01	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	38426449	111295694	Rat
1298085	Bp165	Blood pressure QTL 165		0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	44537979	205135428	Rat
2290453	Scl55	Serum cholesterol level QTL 55	2.83		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	2	28652666	139067443	Rat
152025206	Hrtrt23	Heart rate QTL 23	5.98		heart pumping trait (VT:2000009)		2	30219200	171802126	Rat
1358894	Kidm24	Kidney mass QTL 24	4.03		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	27148328	159440891	Rat
731184	Mamtr4	Mammary tumor resistance QTL 4		0.0003	mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	2	18227137	63227137	Rat
152025204	Hrtrt22	Heart rate QTL 22	5.6		heart pumping trait (VT:2000009)		2	30219200	171802126	Rat
61371	Edpm1	Estrogen-dependent pituitary mass QTL 1	4	0.05	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	2	36868643	81868643	Rat
1354601	Slep1	Serum leptin concentration QTL 1	5.39		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	2	44904355	89904355	Rat
1582246	Cm60	Cardiac mass QTL 60	5.8		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	33269996	78269996	Rat
1354603	Bp243	Blood pressure QTL 243	3.9		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	28652666	73652666	Rat

Markers in Region

D2Rat202

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	2	53,461,844 - 53,462,005 (+)	Marker Load Pipeline
mRatBN7.2	2	51,729,139 - 51,729,300 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	52,507,645 - 52,507,805	NCBI	Rnor6.0
Rnor_5.0	2	70,871,440 - 70,871,600	UniSTS	Rnor5.0
RGSC_v3.4	2	51,821,000 - 51,821,161	RGD	RGSC3.4
RGSC_v3.4	2	51,821,001 - 51,821,161	UniSTS	RGSC3.4
Celera	2	47,383,887 - 47,384,047	UniSTS
RGSC_v3.1	2	51,749,233 - 51,749,394	RGD
SHRSP x BN Map	2	22.9498	UniSTS
SHRSP x BN Map	2	22.9498	RGD
Cytogenetic Map	2	q16	UniSTS

BF387209

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	51,729,351 - 51,729,502 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	52,507,857 - 52,508,007	NCBI	Rnor6.0
Rnor_5.0	2	70,871,652 - 70,871,802	UniSTS	Rnor5.0
RGSC_v3.4	2	51,821,213 - 51,821,363	UniSTS	RGSC3.4
Celera	2	47,384,099 - 47,384,249	UniSTS
RH 3.4 Map	2	330.5	UniSTS
Cytogenetic Map	2	q16	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001100698	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006231960	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006231961	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006231962	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006231963	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039102253	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063281778	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063281779	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063281780	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063281781	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063281782	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC098842	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC161974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473955	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ225691	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227233	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227804	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000021608 ⟹ ENSRNOP00000021608

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	53,458,515 - 53,485,285 (-)	Ensembl
mRatBN7.2 Ensembl	2	51,725,541 - 51,753,091 (-)	Ensembl
Rnor_6.0 Ensembl	2	52,504,315 - 52,531,085 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000089303 ⟹ ENSRNOP00000070103

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	2	53,458,515 - 53,485,285 (-)	Ensembl
mRatBN7.2 Ensembl	2	51,725,541 - 51,753,091 (-)	Ensembl
Rnor_6.0 Ensembl	2	52,504,665 - 52,531,083 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000104695 ⟹ ENSRNOP00000089583

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	51,725,831 - 51,753,017 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000107342 ⟹ ENSRNOP00000086042

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	51,735,710 - 51,753,639 (-)	Ensembl

RefSeq Acc Id:

NM_001100698 ⟹ NP_001094168

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	53,458,494 - 53,485,285 (-)	NCBI
mRatBN7.2	2	51,725,789 - 51,752,584 (-)	NCBI
Rnor_6.0	2	52,504,294 - 52,531,085 (-)	NCBI
Rnor_5.0	2	70,867,488 - 70,895,803 (-)	NCBI
RGSC_v3.4	2	51,817,650 - 51,844,634 (-)	RGD
Celera	2	47,380,536 - 47,407,328 (-)	RGD

Sequence:

show sequence

CCCTGAAGCACCCCGACGGCCATGGAGGCTGAAGAAACGATGGAATGCCTTCAGGAGTTTCCTG
AACATCATAAAATGATCTTGGACCGATTGAATGAACAACGGGAGCAGGACCGGTTTACGGACAT
CACCCTGATTGTTGACGGACACCATTTTAAGGCACACAAGGCTGTTCTGGCTGCCTGCAGTAAG
TTCTTCTACAAATTCTTTCAGGAGTTCACTCAAGAACCTTTGGTTGAAATTGAAGGTGTTAGTA
AAATGGCTTTTCGACACTTAATTGAGTTCACATACACAGCAAAGCTAATGATACAAGGGGAAGA
AGAAGCCAATGATGTGTGGAAAGCAGCAGAGTTTCTACAAATGCTGGAAGCTATTAAAGCACTT
GAAGTCAGGAACAAAGAAAACTCAGCTCCATTAGAGGAAACTACTACAGGAAAAAATGAGGCAA
AAAAAAGAAAGATCGCAGAAACTTCCAATGTTATCACCGAGTCCTTGCCATCTGCAGAATCAGA
ACCTGTGGAAATCGAGGTGGAGATTGCTGAAGGCACAATTGAAGTAGAAGACGAAGGCATTGCA
GCTTTGGAGGAAATGGCTTCTGGCAAGCAGTCTATAAAGTACATACAGAGCACAGGCTCCTCCG
ATGACTCTGCTCTAGCACTGTTGGCAGATATCACCAGCAAGTACCGTCCAGGCGAAAGCAAAGG
ACAGATTAGCGAAGATGACTGTGCATCTGACCCCATAAGCAAACAGGTAGAAGGTATTGAAATT
GTGGAACTTCAGCTGTCACATGTGAAGGACTTGTTCCATTGTGAGAAATGTAACCGTTCGTTTA
AATTGTTTTACCATTTTAAGGAACACATGAAATCACACTCCACTGAGAGTTTCAAGTGTGAAAT
ATGCAATAAAAGGTATCTTCGAGAGAGTGCATGGAAACACCACCTAAACTGTTACCACCTTGAA
GAAGGTGGAGTAAGTAAGAAGCAAAGAACTGGGAAAAAAATTCACACATGCCAGTATTGTGAGA
AACAGTTTGACCACTTTGGACACTTTAAAGAACACCTTCGAAAACATACAGGTGAAAAACCTTT
TGAATGTTCAAATTGTCACGAGCGGTTTGCTAGAAATAGCACTCTCAAATGTCACCTCACTGCG
TGCCAAACTGGAGTAGGGGCAAAAAAGGGAAGGAAGAAGCTTTATGAATGCCAGGTCTGTAACA
GTGTATTTAACAGCTGGGACCAGTTCAAAGATCACTTGGTAATACACACTGGAGATAAACCCAA
CCATTGTACTCTGTGTGACTTGTGGTTTATGCAAGGAAATGAATTAAGGAGGCATCTTAGTGAT
GCTCACAATATTTCAGAGCGTATAGTGACTGAAGAAGTCCTTTCAGTAGAAACACACTTACAAA
CGGAACCAGTGACATCAATGACTATTATAGAACAAGTTGGGAAAGTGCATGTGTTACCATTGCT
TCAGGTCCAAGTGGATTCTGCACAAGTAACTGTGGAACAAGTTCATCCAGATCTGCTCCAAGAC
GGCCAAGTGCATGACTCACAAATGAGTGCGCTTCCAGAGCAGGTCCAGGTGAGTTACCTGGAGG
TGGGTCGGATCCAGACTGAAGAAGGTACTGAAGTACACGTTGAAGAGCTTCACGTCGAACGGGT
CAATCAGATGCCAGTGGAAGTACAAACTGAGCTTCTAGAAGCTGACTTGGATCACATGACCCCC
GAAATGATGAGCCAAGAGGAGAGCGAACCTAACCATGCAGATGCTGCCATGGAAGAGTACGAAG
ACACTGAGGGCTTGGAGACCAAACCAGGAGAGCACTCCCACGCTGTAAAAGTGGACCACGACAG
GACATCTATGCCCGTTTTAGAATGAAATAGCAGTGATATTTCTAAATTTACATTTGGGGTAAAC
TGATGGGCAGTGTGATCGTAAGCTATCAAATAAGTGGACCAAAGTTAAGCTATTTCTGTTGTGC
TGAACTGTTTCTATGGAAACAGGCTGATGTCCTTCCAGTTAATGCCACAGAGTGGGAATATTCC
TCATAATGAGTGGGAGCTTTGAGAAGTATATTTCTGGTAACTTAAATGAATTATATTCTTATTA
TATAGTTGGGTCCGAATGCATCTATTTTCATTGTGGTAAGGGTCTCCGTGTCCTCTTCCCCAGG
TCATGTCTCTCCTTAAATTCTTTGCATATTATAAAATCATACTTAAAACCATTAGAATACATAC
ATTTGTATTCTAATGCATGTTTAAAAATTGAGTATGTAGGCAACACAAGGCTGCATGAGGGAAG
TGCATTGTTACTGTGCAGTTAATAGTTGGGGGCTAGCTTTAATTCGAACAACATTCTTGTCTAA
CTAGTGGCTACAAATGCTGTCCCCACAACAGAAACGGTGGTGGCAGAATTTCTAGAATGTTAAA
AAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006231960 ⟹ XP_006232022

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	53,457,893 - 53,486,348 (-)	NCBI
mRatBN7.2	2	51,725,191 - 51,753,646 (-)	NCBI
Rnor_6.0	2	52,503,693 - 52,532,097 (-)	NCBI
Rnor_5.0	2	70,867,488 - 70,895,803 (-)	NCBI

Sequence:

show sequence

GATGGCGAGGAGCTGCCTGGGTACCGGAGCACCTGCGCCATGGGAGGGGAGATTGTGGAAAGAG
AGGCACGTGGAGCCGAAGCCAGCTAGAGCACCCCGACGGCCATGGAGGCTGAAGAAACGATGGA
ATGCCTTCAGGAGTTTCCTGAACATCATAAAATGATCTTGGACCGATTGAATGAACAACGGGAG
CAGGACCGGTTTACGGACATCACCCTGATTGTTGACGGACACCATTTTAAGGCACACAAGGCTG
TTCTGGCTGCCTGCAGTAAGTTCTTCTACAAATTCTTTCAGGAGTTCACTCAAGAACCTTTGGT
TGAAATTGAAGGTGTTAGTAAAATGGCTTTTCGACACTTAATTGAGTTCACATACACAGCAAAG
CTAATGATACAAGGGGAAGAAGAAGCCAATGATGTGTGGAAAGCAGCAGAGTTTCTACAAATGC
TGGAAGCTATTAAAGCACTTGAAGTCAGGAACAAAGAAAACTCAGCTCCATTAGAGGAAACTAC
TACAGGAAAAAATGAGGCAAAAAAAAGAAAGATCGCAGAAACTTCCAATGTTATCACCGAGTCC
TTGCCATCTGCAGAATCAGAACCTGTGGAAATCGAGGTGGAGATTGCTGAAGGCACAATTGAAG
TAGAAGACGAAGGCATTGCAGCTTTGGAGGAAATGGCTTCTGGCAAGCAGTCTATAAAGTACAT
ACAGAGCACAGGCTCCTCCGATGACTCTGCTCTAGCACTGTTGGCAGATATCACCAGCAAGTAC
CGTCCAGGCGAAAGCAAAGGACAGATTAGCGAAGATGACTGTGCATCTGACCCCATAAGCAAAC
AGGTAGAAGGTATTGAAATTGTGGAACTTCAGCTGTCACATGTGAAGGACTTGTTCCATTGTGA
GAAATGTAACCGTTCGTTTAAATTGTTTTACCATTTTAAGGAACACATGAAATCACACTCCACT
GAGAGTTTCAAGTGTGAAATATGCAATAAAAGGTATCTTCGAGAGAGTGCATGGAAACACCACC
TAAACTGTTACCACCTTGAAGAAGGTGGAGTAAGTAAGAAGCAAAGAACTGGGAAAAAAATTCA
CACATGCCAGTATTGTGAGAAACAGTTTGACCACTTTGGACACTTTAAAGAACACCTTCGAAAA
CATACAGGTGAAAAACCTTTTGAATGTTCAAATTGTCACGAGCGGTTTGCTAGAAATAGCACTC
TCAAATGTCACCTCACTGCGTGCCAAACTGGAGTAGGGGCAAAAAAGGGAAGGAAGAAGCTTTA
TGAATGCCAGGTCTGTAACAGTGTATTTAACAGCTGGGACCAGTTCAAAGATCACTTGGTAATA
CACACTGGAGATAAACCCAACCATTGTACTCTGTGTGACTTGTGGTTTATGCAAGGAAATGAAT
TAAGGAGGCATCTTAGTGATGCTCACAATATTTCAGAGCGTATAGTGACTGAAGAAGTCCTTTC
AGTAGAAACACACTTACAAACGGAACCAGTGACATCAATGACTATTATAGAACAAGTTGGGAAA
GTGCATGTGTTACCATTGCTTCAGGTCCAAGTGGATTCTGCACAAGTAACTGTGGAACAAGTTC
ATCCAGATCTGCTCCAAGACGGCCAAGTGCATGACTCACAAATGAGTGCGCTTCCAGAGCAGGT
CCAGGTGAGTTACCTGGAGGTGGGTCGGATCCAGACTGAAGAAGGTACTGAAGTACACGTTGAA
GAGCTTCACGTCGAACGGGTCAATCAGATGCCAGTGGAAGTACAAACTGAGCTTCTAGAAGCTG
ACTTGGATCACATGACCCCCGAAATGATGAGCCAAGAGGAGAGCGAACCTAACCATGCAGATGC
TGCCATGGAAGAGTACGAAGACACTGAGGGCTTGGAGACCAAACCAGGAGAGCACTCCCACGCT
GTAAAAGTGGACCACGACAGGACATCTATGCCCGTTTTAGAATGAAATAGCAGTGATATTTCTA
AATTTACATTTGGGGTAAACTGATGGGCAGTGTGATCGTAAGCTATCAAATAAGTGGACCAAAG
TTAAGCTATTTCTGTTGTGCTGAACTGTTTCTATGGAAACAGGCTGATGTCCTTCCAGTTAATG
CCACAGAGTGGGAATATTCCTCATAATGAGTGGGAGCTTTGAGAAGTATATTTCTGGTAACTTA
AATGAATTATATTCTTATTATATAGTTGGGTCCGAATGCATCTATTTTCATTGTGGTAAGGGTC
TCCGTGTCCTCTTCCCCAGGTCATGTCTCTCCTTAAATTCTTTGCATATTATAAAATCATACTT
AAAACCATTAGAATACATACATTTGTATTCTAATGCATGTTTAAAAATTGAGTATGTAGGCAAC
ACAAGGCTGCATGAGGGAAGTGCATTGTTACTGTGCAGTTAATAGTTGGGGGCTAGCTTTAATT
CGAACAACATTCTTGTCTAACTAGTGGCTACAAATGCTGTCCCCACAACAGAAACGGTGGTGGC
AGAATTTCTAGAATGTTAAAAAAAAAAAAAAAAAAAAACCACCCTGTGCCTTTTCAAAAACCAA
CAAAACTTCAGAAAAACATCTCTGGTTCTTTCAAAGTTTGTGTTTTAAAGAGCAGCATAAAGTG
CTCTGGTACTTGGTATTTTTGCTTAAAATGACAATTACCAATTCATTTTCCTTTAAGTTACATT
GAAAATTTTTCATTTAACGGCGGCTAAAGGGCCATTTTCAATGGAAAAAATTCATTTCCATCTG
TGGTAAACTTTATTTTGATGAGAACTTGCACTAGTATTTTACCACCAGATGGGAAAAGATTAGC
TGAGCATCATTTTAAAATTAATGTATTTAAATAAAGTACAGAGGAAACGTATGTATATAATATA
TCAGGCTTTGTTTTGAGTGGACTCTTTTCCCCCCAATCCTTAATGTAAAGATTTTGTGCTATAA
CTTTTAAAGCCATACAAATAAGAGTGCTAAACTGTGGACTTAAAAGTAGTTGTGTAAATATTTT
TAATCAGTATTACTTGGAAAATAAAAATATAACAACCACATAAAATCAATATGCTATTTTCTTT
ACCTGTTAAATACTGGGAGATAATTTACATTTTAAAGTAAACTTTAAAATTATGTGTTCATGA

hide sequence

RefSeq Acc Id:

XM_006231961 ⟹ XP_006232023

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	53,457,893 - 53,485,630 (-)	NCBI
mRatBN7.2	2	51,725,191 - 51,752,930 (-)	NCBI
Rnor_6.0	2	52,503,185 - 52,531,522 (-)	NCBI
Rnor_5.0	2	70,867,488 - 70,895,803 (-)	NCBI

Sequence:

show sequence

GGGAGAGGAGGGAGGGCGCCGGAGGGAGAGGCGACCCGGGGAGTCGTTGTGGGCCGCGGGCCGG
ATCGGGGCTGGGGCTGCGGCAGCCTGAGCCGGGCGGAAGTCTTGGCGGGCCGTTGGGAGGCCGC
CGAGGCTGTTCGGGGTCCTCCCCGGCCGGACTTGCGCTCCCGGGCGCCCTGAGCCTCCGGCACT
GTGCCCACCCCGCTCCAGCTCGCGTCTCCAGACTCCAATTAGAGCACCCCGACGGCCATGGAGG
CTGAAGAAACGATGGAATGCCTTCAGGAGTTTCCTGAACATCATAAAATGATCTTGGACCGATT
GAATGAACAACGGGAGCAGGACCGGTTTACGGACATCACCCTGATTGTTGACGGACACCATTTT
AAGGCACACAAGGCTGTTCTGGCTGCCTGCAGTAAGTTCTTCTACAAATTCTTTCAGGAGTTCA
CTCAAGAACCTTTGGTTGAAATTGAAGGTGTTAGTAAAATGGCTTTTCGACACTTAATTGAGTT
CACATACACAGCAAAGCTAATGATACAAGGGGAAGAAGAAGCCAATGATGTGTGGAAAGCAGCA
GAGTTTCTACAAATGCTGGAAGCTATTAAAGCACTTGAAGTCAGGAACAAAGAAAACTCAGCTC
CATTAGAGGAAACTACTACAGGAAAAAATGAGGCAAAAAAAAGAAAGATCGCAGAAACTTCCAA
TGTTATCACCGAGTCCTTGCCATCTGCAGAATCAGAACCTGTGGAAATCGAGGTGGAGATTGCT
GAAGGCACAATTGAAGTAGAAGACGAAGGCATTGCAGCTTTGGAGGAAATGGCTTCTGGCAAGC
AGTCTATAAAGTACATACAGAGCACAGGCTCCTCCGATGACTCTGCTCTAGCACTGTTGGCAGA
TATCACCAGCAAGTACCGTCCAGGCGAAAGCAAAGGACAGATTAGCGAAGATGACTGTGCATCT
GACCCCATAAGCAAACAGGTAGAAGGTATTGAAATTGTGGAACTTCAGCTGTCACATGTGAAGG
ACTTGTTCCATTGTGAGAAATGTAACCGTTCGTTTAAATTGTTTTACCATTTTAAGGAACACAT
GAAATCACACTCCACTGAGAGTTTCAAGTGTGAAATATGCAATAAAAGGTATCTTCGAGAGAGT
GCATGGAAACACCACCTAAACTGTTACCACCTTGAAGAAGGTGGAGTAAGTAAGAAGCAAAGAA
CTGGGAAAAAAATTCACACATGCCAGTATTGTGAGAAACAGTTTGACCACTTTGGACACTTTAA
AGAACACCTTCGAAAACATACAGGTGAAAAACCTTTTGAATGTTCAAATTGTCACGAGCGGTTT
GCTAGAAATAGCACTCTCAAATGTCACCTCACTGCGTGCCAAACTGGAGTAGGGGCAAAAAAGG
GAAGGAAGAAGCTTTATGAATGCCAGGTCTGTAACAGTGTATTTAACAGCTGGGACCAGTTCAA
AGATCACTTGGTAATACACACTGGAGATAAACCCAACCATTGTACTCTGTGTGACTTGTGGTTT
ATGCAAGGAAATGAATTAAGGAGGCATCTTAGTGATGCTCACAATATTTCAGAGCGTATAGTGA
CTGAAGAAGTCCTTTCAGTAGAAACACACTTACAAACGGAACCAGTGACATCAATGACTATTAT
AGAACAAGTTGGGAAAGTGCATGTGTTACCATTGCTTCAGGTCCAAGTGGATTCTGCACAAGTA
ACTGTGGAACAAGTTCATCCAGATCTGCTCCAAGACGGCCAAGTGCATGACTCACAAATGAGTG
CGCTTCCAGAGCAGGTCCAGGTGAGTTACCTGGAGGTGGGTCGGATCCAGACTGAAGAAGGTAC
TGAAGTACACGTTGAAGAGCTTCACGTCGAACGGGTCAATCAGATGCCAGTGGAAGTACAAACT
GAGCTTCTAGAAGCTGACTTGGATCACATGACCCCCGAAATGATGAGCCAAGAGGAGAGCGAAC
CTAACCATGCAGATGCTGCCATGGAAGAGTACGAAGACACTGAGGGCTTGGAGACCAAACCAGG
AGAGCACTCCCACGCTGTAAAAGTGGACCACGACAGGACATCTATGCCCGTTTTAGAATGAAAT
AGCAGTGATATTTCTAAATTTACATTTGGGGTAAACTGATGGGCAGTGTGATCGTAAGCTATCA
AATAAGTGGACCAAAGTTAAGCTATTTCTGTTGTGCTGAACTGTTTCTATGGAAACAGGCTGAT
GTCCTTCCAGTTAATGCCACAGAGTGGGAATATTCCTCATAATGAGTGGGAGCTTTGAGAAGTA
TATTTCTGGTAACTTAAATGAATTATATTCTTATTATATAGTTGGGTCCGAATGCATCTATTTT
CATTGTGGTAAGGGTCTCCGTGTCCTCTTCCCCAGGTCATGTCTCTCCTTAAATTCTTTGCATA
TTATAAAATCATACTTAAAACCATTAGAATACATACATTTGTATTCTAATGCATGTTTAAAAAT
TGAGTATGTAGGCAACACAAGGCTGCATGAGGGAAGTGCATTGTTACTGTGCAGTTAATAGTTG
GGGGCTAGCTTTAATTCGAACAACATTCTTGTCTAACTAGTGGCTACAAATGCTGTCCCCACAA
CAGAAACGGTGGTGGCAGAATTTCTAGAATGTTAAAAAAAAAAAAAAAAAAAAACCACCCTGTG
CCTTTTCAAAAACCAACAAAACTTCAGAAAAACATCTCTGGTTCTTTCAAAGTTTGTGTTTTAA
AGAGCAGCATAAAGTGCTCTGGTACTTGGTATTTTTGCTTAAAATGACAATTACCAATTCATTT
TCCTTTAAGTTACATTGAAAATTTTTCATTTAACGGCGGCTAAAGGGCCATTTTCAATGGAAAA
AATTCATTTCCATCTGTGGTAAACTTTATTTTGATGAGAACTTGCACTAGTATTTTACCACCAG
ATGGGAAAAGATTAGCTGAGCATCATTTTAAAATTAATGTATTTAAATAAAGTACAGAGGAAAC
GTATGTATATAATATATCAGGCTTTGTTTTGAGTGGACTCTTTTCCCCCCAATCCTTAATGTAA
AGATTTTGTGCTATAACTTTTAAAGCCATACAAATAAGAGTGCTAAACTGTGGACTTAAAAGTA
GTTGTGTAAATATTTTTAATCAGTATTACTTGGAAAATAAAAATATAACAACCACATAAAATCA
ATATGCTATTTTCTTTACCTGTTAAATACTGGGAGATAATTTACATTTTAAAGTAAACTTTAAA
ATTATGTGTTCATGACTCTTTTTAAAGTTATTTAATTTTATGTGTGTGGGTGTTGTGCTTGTAT
GTATGACTGCGCACCGTGTGTGCCTGATGACTCCCTCCCCTAACACAGAAGGTGCTTAGAGTCG
GTTGTGAGCTGCCATGCGGGTGCTGAGAAGCAAACCTGGGTCCCCAGAAAGAAGAGCCATCGCT
GGCCTCGCTAATGATCAGTTTGGAGATGCTTGATATATTTTTGTGACTGTGGTAAACATGGCTC
ATTAAGATACAAGATTGTTGTCACATACTTCCTAACCCAAGACTTGCTCGGAAGGCCAGACACA
CGTTACTTATATCTTTGTAGATCTTATTGACATACAAGTGTTTTTAGTAGTGCCTATTTATTTT
AAACATATTTTTCTACTTGTTTTTAAAGAGATCAGCTCAAGCAATACTTTGGTAATTGTGGAAT
TAAATGGTAACAAGTCACAAAAGTTTGCTGAAGAGGTGTCAGTTTAATATTAAGATCATGCTTA
CAAAGATCACA

hide sequence

RefSeq Acc Id:

XM_006231962 ⟹ XP_006232024

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	53,457,893 - 53,485,875 (-)	NCBI
mRatBN7.2	2	51,722,774 - 51,753,416 (-)	NCBI
Rnor_6.0	2	52,503,185 - 52,531,681 (-)	NCBI
Rnor_5.0	2	70,867,488 - 70,895,803 (-)	NCBI

Sequence:

show sequence

TCCCAACAGGGCCGCAGGGGCGTGGCCAGGCGTTGCGGGGGATTGGCGCTCCGGGTGCGTCCGC
GTCCGCCGCGGTGACGCAGCACGTCGACGTAAGTGACGCGCAGGCCCGGGCCGCTCCTCCTTCC
CTGAAGCACCCCGACGGCCATGGAGGCTGAAGAAACGATGGAATGCCTTCAGGAGTTTCCTGAA
CATCATAAAATGATCTTGGACCGATTGAATGAACAACGGGAGCAGGACCGGTTTACGGACATCA
CCCTGATTGTTGACGGACACCATTTTAAGGCACACAAGGCTGTTCTGGCTGCCTGCAGTAAGTT
CTTCTACAAATTCTTTCAGGAGTTCACTCAAGAACCTTTGGTTGAAATTGAAGGTGTTAGTAAA
ATGGCTTTTCGACACTTAATTGAGTTCACATACACAGCAAAGCTAATGATACAAGGGGAAGAAG
AAGCCAATGATGTGTGGAAAGCAGCAGAGTTTCTACAAATGCTGGAAGCTATTAAAGCACTTGA
AGTCAGGAACAAAGAAAACTCAGCTCCATTAGAGGAAACTACTACAGGAAAAAATGAGGCAAAA
AAAAGAAAGATCGCAGAAACTTCCAATGTTATCACCGAGTCCTTGCCATCTGCAGAATCAGAAC
CTGTGGAAATCGAGGTGGAGATTGCTGAAGGCACAATTGAAGTAGAAGACGAAGGCATTGCAGC
TTTGGAGGAAATGGCTTCTGGCAAGCAGTCTATAAAGTACATACAGAGCACAGGCTCCTCCGAT
GACTCTGCTCTAGCACTGTTGGCAGATATCACCAGCAAGTACCGTCCAGGCGAAAGCAAAGGAC
AGATTAGCGAAGATGACTGTGCATCTGACCCCATAAGCAAACAGGTAGAAGGTATTGAAATTGT
GGAACTTCAGCTGTCACATGTGAAGGACTTGTTCCATTGTGAGAAATGTAACCGTTCGTTTAAA
TTGTTTTACCATTTTAAGGAACACATGAAATCACACTCCACTGAGAGTTTCAAGTGTGAAATAT
GCAATAAAAGGTATCTTCGAGAGAGTGCATGGAAACACCACCTAAACTGTTACCACCTTGAAGA
AGGTGGAGTAAGTAAGAAGCAAAGAACTGGGAAAAAAATTCACACATGCCAGTATTGTGAGAAA
CAGTTTGACCACTTTGGACACTTTAAAGAACACCTTCGAAAACATACAGGTGAAAAACCTTTTG
AATGTTCAAATTGTCACGAGCGGTTTGCTAGAAATAGCACTCTCAAATGTCACCTCACTGCGTG
CCAAACTGGAGTAGGGGCAAAAAAGGGAAGGAAGAAGCTTTATGAATGCCAGGTCTGTAACAGT
GTATTTAACAGCTGGGACCAGTTCAAAGATCACTTGGTAATACACACTGGAGATAAACCCAACC
ATTGTACTCTGTGTGACTTGTGGTTTATGCAAGGAAATGAATTAAGGAGGCATCTTAGTGATGC
TCACAATATTTCAGAGCGTATAGTGACTGAAGAAGTCCTTTCAGTAGAAACACACTTACAAACG
GAACCAGTGACATCAATGACTATTATAGAACAAGTTGGGAAAGTGCATGTGTTACCATTGCTTC
AGGTCCAAGTGGATTCTGCACAAGTAACTGTGGAACAAGTTCATCCAGATCTGCTCCAAGACGG
CCAAGTGCATGACTCACAAATGAGTGCGCTTCCAGAGCAGGTCCAGGTGAGTTACCTGGAGGTG
GGTCGGATCCAGACTGAAGAAGGTACTGAAGTACACGTTGAAGAGCTTCACGTCGAACGGGTCA
ATCAGATGCCAGTGGAAGTACAAACTGAGCTTCTAGAAGCTGACTTGGATCACATGACCCCCGA
AATGATGAGCCAAGAGGAGAGCGAACCTAACCATGCAGATGCTGCCATGGAAGAGTACGAAGAC
ACTGAGGGCTTGGAGACCAAACCAGGAGAGCACTCCCACGCTGTAAAAGTGGACCACGACAGGA
CATCTATGCCCGTTTTAGAATGAAATAGCAGTGATATTTCTAAATTTACATTTGGGGTAAACTG
ATGGGCAGTGTGATCGTAAGCTATCAAATAAGTGGACCAAAGTTAAGCTATTTCTGTTGTGCTG
AACTGTTTCTATGGAAACAGGCTGATGTCCTTCCAGTTAATGCCACAGAGTGGGAATATTCCTC
ATAATGAGTGGGAGCTTTGAGAAGTATATTTCTGGTAACTTAAATGAATTATATTCTTATTATA
TAGTTGGGTCCGAATGCATCTATTTTCATTGTGGTAAGGGTCTCCGTGTCCTCTTCCCCAGGTC
ATGTCTCTCCTTAAATTCTTTGCATATTATAAAATCATACTTAAAACCATTAGAATACATACAT
TTGTATTCTAATGCATGTTTAAAAATTGAGTATGTAGGCAACACAAGGCTGCATGAGGGAAGTG
CATTGTTACTGTGCAGTTAATAGTTGGGGGCTAGCTTTAATTCGAACAACATTCTTGTCTAACT
AGTGGCTACAAATGCTGTCCCCACAACAGAAACGGTGGTGGCAGAATTTCTAGAATGTTAAAAA
AAAAAAAAAAAAAAAACCACCCTGTGCCTTTTCAAAAACCAACAAAACTTCAGAAAAACATCTC
TGGTTCTTTCAAAGTTTGTGTTTTAAAGAGCAGCATAAAGTGCTCTGGTACTTGGTATTTTTGC
TTAAAATGACAATTACCAATTCATTTTCCTTTAAGTTACATTGAAAATTTTTCATTTAACGGCG
GCTAAAGGGCCATTTTCAATGGAAAAAATTCATTTCCATCTGTGGTAAACTTTATTTTGATGAG
AACTTGCACTAGTATTTTACCACCAGATGGGAAAAGATTAGCTGAGCATCATTTTAAAATTAAT
GTATTTAAATAAAGTACAGAGGAAACGTATGTATATAATATATCAGGCTTTGTTTTGAGTGGAC
TCTTTTCCCCCCAATCCTTAATGTAAAGATTTTGTGCTATAACTTTTAAAGCCATACAAATAAG
AGTGCTAAACTGTGGACTTAAAAGTAGTTGTGTAAATATTTTTAATCAGTATTACTTGGAAAAT
AAAAATATAACAACCACATAAAATCAATATGCTATTTTCTTTACCTGTTAAATACTGGGAGATA
ATTTACATTTTAAAGTAAACTTTAAAATTATGTGTTCATGACTCTTTTTAAAGTTATTTAATTT
TATGTGTGTGGGTGTTGTGCTTGTATGTATGACTGCGCACCGTGTGTGCCTGATGACTCCCTCC
CCTAACACAGAAGGTGCTTAGAGTCGGTTGTGAGCTGCCATGCGGGTGCTGAGAAGCAAACCTG
GGTCCCCAGAAAGAAGAGCCATCGCTGGCCTCGCTAATGATCAGTTTGGAGATGCTTGATATAT
TTTTGTGACTGTGGTAAACATGGCTCATTAAGATACAAGATTGTTGTCACATACTTCCTAACCC
AAGACTTGCTCGGAAGGCCAGACACACGTTACTTATATCTTTGTAGATCTTATTGACATACAAG
TGTTTTTAGTAGTGCCTATTTATTTTAAACATATTTTTCTACTTGTTTTTAAAGAGATCAGCTC
AAGCAATACTTTGGTAATTGTGGAATTAAATGGTAACAAGTCACAAAAGTTTGCTGAAGAGGTG
TCAGTTTAATATTAAGATCATGCTTACAAAGATCACA

hide sequence

RefSeq Acc Id:

XM_006231963 ⟹ XP_006232025

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	53,457,893 - 53,485,924 (-)	NCBI
mRatBN7.2	2	51,722,774 - 51,753,416 (-)	NCBI
Rnor_6.0	2	52,503,185 - 52,531,686 (-)	NCBI
Rnor_5.0	2	70,867,488 - 70,895,803 (-)	NCBI

Sequence:

show sequence

CCTCCTCCCAACAGGGCCGCAGGGGCGTGGCCAGGCGTTGCGGGGGATTGGCGCTCCGGGTGCG
TCCGCGTCCGCCGCGGTGACGCAGCACGTCGACAGCACCCCGACGGCCATGGAGGCTGAAGAAA
CGATGGAATGCCTTCAGGAGTTTCCTGAACATCATAAAATGATCTTGGACCGATTGAATGAACA
ACGGGAGCAGGACCGGTTTACGGACATCACCCTGATTGTTGACGGACACCATTTTAAGGCACAC
AAGGCTGTTCTGGCTGCCTGCAGTAAGTTCTTCTACAAATTCTTTCAGGAGTTCACTCAAGAAC
CTTTGGTTGAAATTGAAGGTGTTAGTAAAATGGCTTTTCGACACTTAATTGAGTTCACATACAC
AGCAAAGCTAATGATACAAGGGGAAGAAGAAGCCAATGATGTGTGGAAAGCAGCAGAGTTTCTA
CAAATGCTGGAAGCTATTAAAGCACTTGAAGTCAGGAACAAAGAAAACTCAGCTCCATTAGAGG
AAACTACTACAGGAAAAAATGAGGCAAAAAAAAGAAAGATCGCAGAAACTTCCAATGTTATCAC
CGAGTCCTTGCCATCTGCAGAATCAGAACCTGTGGAAATCGAGGTGGAGATTGCTGAAGGCACA
ATTGAAGTAGAAGACGAAGGCATTGCAGCTTTGGAGGAAATGGCTTCTGGCAAGCAGTCTATAA
AGTACATACAGAGCACAGGCTCCTCCGATGACTCTGCTCTAGCACTGTTGGCAGATATCACCAG
CAAGTACCGTCCAGGCGAAAGCAAAGGACAGATTAGCGAAGATGACTGTGCATCTGACCCCATA
AGCAAACAGGTAGAAGGTATTGAAATTGTGGAACTTCAGCTGTCACATGTGAAGGACTTGTTCC
ATTGTGAGAAATGTAACCGTTCGTTTAAATTGTTTTACCATTTTAAGGAACACATGAAATCACA
CTCCACTGAGAGTTTCAAGTGTGAAATATGCAATAAAAGGTATCTTCGAGAGAGTGCATGGAAA
CACCACCTAAACTGTTACCACCTTGAAGAAGGTGGAGTAAGTAAGAAGCAAAGAACTGGGAAAA
AAATTCACACATGCCAGTATTGTGAGAAACAGTTTGACCACTTTGGACACTTTAAAGAACACCT
TCGAAAACATACAGGTGAAAAACCTTTTGAATGTTCAAATTGTCACGAGCGGTTTGCTAGAAAT
AGCACTCTCAAATGTCACCTCACTGCGTGCCAAACTGGAGTAGGGGCAAAAAAGGGAAGGAAGA
AGCTTTATGAATGCCAGGTCTGTAACAGTGTATTTAACAGCTGGGACCAGTTCAAAGATCACTT
GGTAATACACACTGGAGATAAACCCAACCATTGTACTCTGTGTGACTTGTGGTTTATGCAAGGA
AATGAATTAAGGAGGCATCTTAGTGATGCTCACAATATTTCAGAGCGTATAGTGACTGAAGAAG
TCCTTTCAGTAGAAACACACTTACAAACGGAACCAGTGACATCAATGACTATTATAGAACAAGT
TGGGAAAGTGCATGTGTTACCATTGCTTCAGGTCCAAGTGGATTCTGCACAAGTAACTGTGGAA
CAAGTTCATCCAGATCTGCTCCAAGACGGCCAAGTGCATGACTCACAAATGAGTGCGCTTCCAG
AGCAGGTCCAGGTGAGTTACCTGGAGGTGGGTCGGATCCAGACTGAAGAAGGTACTGAAGTACA
CGTTGAAGAGCTTCACGTCGAACGGGTCAATCAGATGCCAGTGGAAGTACAAACTGAGCTTCTA
GAAGCTGACTTGGATCACATGACCCCCGAAATGATGAGCCAAGAGGAGAGCGAACCTAACCATG
CAGATGCTGCCATGGAAGAGTACGAAGACACTGAGGGCTTGGAGACCAAACCAGGAGAGCACTC
CCACGCTGTAAAAGTGGACCACGACAGGACATCTATGCCCGTTTTAGAATGAAATAGCAGTGAT
ATTTCTAAATTTACATTTGGGGTAAACTGATGGGCAGTGTGATCGTAAGCTATCAAATAAGTGG
ACCAAAGTTAAGCTATTTCTGTTGTGCTGAACTGTTTCTATGGAAACAGGCTGATGTCCTTCCA
GTTAATGCCACAGAGTGGGAATATTCCTCATAATGAGTGGGAGCTTTGAGAAGTATATTTCTGG
TAACTTAAATGAATTATATTCTTATTATATAGTTGGGTCCGAATGCATCTATTTTCATTGTGGT
AAGGGTCTCCGTGTCCTCTTCCCCAGGTCATGTCTCTCCTTAAATTCTTTGCATATTATAAAAT
CATACTTAAAACCATTAGAATACATACATTTGTATTCTAATGCATGTTTAAAAATTGAGTATGT
AGGCAACACAAGGCTGCATGAGGGAAGTGCATTGTTACTGTGCAGTTAATAGTTGGGGGCTAGC
TTTAATTCGAACAACATTCTTGTCTAACTAGTGGCTACAAATGCTGTCCCCACAACAGAAACGG
TGGTGGCAGAATTTCTAGAATGTTAAAAAAAAAAAAAAAAAAAAACCACCCTGTGCCTTTTCAA
AAACCAACAAAACTTCAGAAAAACATCTCTGGTTCTTTCAAAGTTTGTGTTTTAAAGAGCAGCA
TAAAGTGCTCTGGTACTTGGTATTTTTGCTTAAAATGACAATTACCAATTCATTTTCCTTTAAG
TTACATTGAAAATTTTTCATTTAACGGCGGCTAAAGGGCCATTTTCAATGGAAAAAATTCATTT
CCATCTGTGGTAAACTTTATTTTGATGAGAACTTGCACTAGTATTTTACCACCAGATGGGAAAA
GATTAGCTGAGCATCATTTTAAAATTAATGTATTTAAATAAAGTACAGAGGAAACGTATGTATA
TAATATATCAGGCTTTGTTTTGAGTGGACTCTTTTCCCCCCAATCCTTAATGTAAAGATTTTGT
GCTATAACTTTTAAAGCCATACAAATAAGAGTGCTAAACTGTGGACTTAAAAGTAGTTGTGTAA
ATATTTTTAATCAGTATTACTTGGAAAATAAAAATATAACAACCACATAAAATCAATATGCTAT
TTTCTTTACCTGTTAAATACTGGGAGATAATTTACATTTTAAAGTAAACTTTAAAATTATGTGT
TCATGACTCTTTTTAAAGTTATTTAATTTTATGTGTGTGGGTGTTGTGCTTGTATGTATGACTG
CGCACCGTGTGTGCCTGATGACTCCCTCCCCTAACACAGAAGGTGCTTAGAGTCGGTTGTGAGC
TGCCATGCGGGTGCTGAGAAGCAAACCTGGGTCCCCAGAAAGAAGAGCCATCGCTGGCCTCGCT
AATGATCAGTTTGGAGATGCTTGATATATTTTTGTGACTGTGGTAAACATGGCTCATTAAGATA
CAAGATTGTTGTCACATACTTCCTAACCCAAGACTTGCTCGGAAGGCCAGACACACGTTACTTA
TATCTTTGTAGATCTTATTGACATACAAGTGTTTTTAGTAGTGCCTATTTATTTTAAACATATT
TTTCTACTTGTTTTTAAAGAGATCAGCTCAAGCAATACTTTGGTAATTGTGGAATTAAATGGTA
ACAAGTCACAAAAGTTTGCTGAAGAGGTGTCAGTTTAATATTAAGATCATGCTTACAAAGATCA
CA

hide sequence

RefSeq Acc Id:

XM_039102253 ⟹ XP_038958181

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	53,457,893 - 53,468,876 (-)	NCBI
mRatBN7.2	2	51,722,774 - 51,736,400 (-)	NCBI

RefSeq Acc Id:

XM_063281778 ⟹ XP_063137848

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	53,457,893 - 53,486,348 (-)	NCBI

RefSeq Acc Id:

XM_063281779 ⟹ XP_063137849

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	53,457,893 - 53,485,630 (-)	NCBI

RefSeq Acc Id:

XM_063281780 ⟹ XP_063137850

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	53,457,893 - 53,485,875 (-)	NCBI

RefSeq Acc Id:

XM_063281781 ⟹ XP_063137851

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	53,457,893 - 53,485,924 (-)	NCBI

RefSeq Acc Id:

XM_063281782 ⟹ XP_063137852

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	53,457,893 - 53,475,465 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001094168	(Get FASTA)	NCBI Sequence Viewer
	XP_006232022	(Get FASTA)	NCBI Sequence Viewer
	XP_006232023	(Get FASTA)	NCBI Sequence Viewer
	XP_006232024	(Get FASTA)	NCBI Sequence Viewer
	XP_006232025	(Get FASTA)	NCBI Sequence Viewer
	XP_038958181	(Get FASTA)	NCBI Sequence Viewer
	XP_063137848	(Get FASTA)	NCBI Sequence Viewer
	XP_063137849	(Get FASTA)	NCBI Sequence Viewer
	XP_063137850	(Get FASTA)	NCBI Sequence Viewer
	XP_063137851	(Get FASTA)	NCBI Sequence Viewer
	XP_063137852	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH98842	(Get FASTA)	NCBI Sequence Viewer
	AAI61974	(Get FASTA)	NCBI Sequence Viewer
	EDM10429	(Get FASTA)	NCBI Sequence Viewer
	EDM10430	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000021608
	ENSRNOP00000021608.4
	ENSRNOP00000070103
	ENSRNOP00000070103.1

RefSeq Acc Id:

NP_001094168 ⟸ NM_001100698

- UniProtKB:

B1WC22 (UniProtKB/TrEMBL), F7FPM3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEAEETMECLQEFPEHHKMILDRLNEQREQDRFTDITLIVDGHHFKAHKAVLAACSKFFYKFFQ
EFTQEPLVEIEGVSKMAFRHLIEFTYTAKLMIQGEEEANDVWKAAEFLQMLEAIKALEVRNKEN
SAPLEETTTGKNEAKKRKIAETSNVITESLPSAESEPVEIEVEIAEGTIEVEDEGIAALEEMAS
GKQSIKYIQSTGSSDDSALALLADITSKYRPGESKGQISEDDCASDPISKQVEGIEIVELQLSH
VKDLFHCEKCNRSFKLFYHFKEHMKSHSTESFKCEICNKRYLRESAWKHHLNCYHLEEGGVSKK
QRTGKKIHTCQYCEKQFDHFGHFKEHLRKHTGEKPFECSNCHERFARNSTLKCHLTACQTGVGA
KKGRKKLYECQVCNSVFNSWDQFKDHLVIHTGDKPNHCTLCDLWFMQGNELRRHLSDAHNISER
IVTEEVLSVETHLQTEPVTSMTIIEQVGKVHVLPLLQVQVDSAQVTVEQVHPDLLQDGQVHDSQ
MSALPEQVQVSYLEVGRIQTEEGTEVHVEELHVERVNQMPVEVQTELLEADLDHMTPEMMSQEE
SEPNHADAAMEEYEDTEGLETKPGEHSHAVKVDHDRTSMPVLE

hide sequence

RefSeq Acc Id:	XP_006232022 ⟸ XM_006231960
- Peptide Label:	isoform X1
- UniProtKB:	B1WC22 (UniProtKB/TrEMBL), F7FPM3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAEETMECLQEFPEHHKMILDRLNEQREQDRFTDITLIVDGHHFKAHKAVLAACSKFFYKFFQ EFTQEPLVEIEGVSKMAFRHLIEFTYTAKLMIQGEEEANDVWKAAEFLQMLEAIKALEVRNKEN SAPLEETTTGKNEAKKRKIAETSNVITESLPSAESEPVEIEVEIAEGTIEVEDEGIAALEEMAS GKQSIKYIQSTGSSDDSALALLADITSKYRPGESKGQISEDDCASDPISKQVEGIEIVELQLSH VKDLFHCEKCNRSFKLFYHFKEHMKSHSTESFKCEICNKRYLRESAWKHHLNCYHLEEGGVSKK QRTGKKIHTCQYCEKQFDHFGHFKEHLRKHTGEKPFECSNCHERFARNSTLKCHLTACQTGVGA KKGRKKLYECQVCNSVFNSWDQFKDHLVIHTGDKPNHCTLCDLWFMQGNELRRHLSDAHNISER IVTEEVLSVETHLQTEPVTSMTIIEQVGKVHVLPLLQVQVDSAQVTVEQVHPDLLQDGQVHDSQ MSALPEQVQVSYLEVGRIQTEEGTEVHVEELHVERVNQMPVEVQTELLEADLDHMTPEMMSQEE SEPNHADAAMEEYEDTEGLETKPGEHSHAVKVDHDRTSMPVLE hide sequence

RefSeq Acc Id:	XP_006232025 ⟸ XM_006231963
- Peptide Label:	isoform X1
- UniProtKB:	B1WC22 (UniProtKB/TrEMBL), F7FPM3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAEETMECLQEFPEHHKMILDRLNEQREQDRFTDITLIVDGHHFKAHKAVLAACSKFFYKFFQ EFTQEPLVEIEGVSKMAFRHLIEFTYTAKLMIQGEEEANDVWKAAEFLQMLEAIKALEVRNKEN SAPLEETTTGKNEAKKRKIAETSNVITESLPSAESEPVEIEVEIAEGTIEVEDEGIAALEEMAS GKQSIKYIQSTGSSDDSALALLADITSKYRPGESKGQISEDDCASDPISKQVEGIEIVELQLSH VKDLFHCEKCNRSFKLFYHFKEHMKSHSTESFKCEICNKRYLRESAWKHHLNCYHLEEGGVSKK QRTGKKIHTCQYCEKQFDHFGHFKEHLRKHTGEKPFECSNCHERFARNSTLKCHLTACQTGVGA KKGRKKLYECQVCNSVFNSWDQFKDHLVIHTGDKPNHCTLCDLWFMQGNELRRHLSDAHNISER IVTEEVLSVETHLQTEPVTSMTIIEQVGKVHVLPLLQVQVDSAQVTVEQVHPDLLQDGQVHDSQ MSALPEQVQVSYLEVGRIQTEEGTEVHVEELHVERVNQMPVEVQTELLEADLDHMTPEMMSQEE SEPNHADAAMEEYEDTEGLETKPGEHSHAVKVDHDRTSMPVLE hide sequence

RefSeq Acc Id:	XP_006232024 ⟸ XM_006231962
- Peptide Label:	isoform X1
- UniProtKB:	B1WC22 (UniProtKB/TrEMBL), F7FPM3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAEETMECLQEFPEHHKMILDRLNEQREQDRFTDITLIVDGHHFKAHKAVLAACSKFFYKFFQ EFTQEPLVEIEGVSKMAFRHLIEFTYTAKLMIQGEEEANDVWKAAEFLQMLEAIKALEVRNKEN SAPLEETTTGKNEAKKRKIAETSNVITESLPSAESEPVEIEVEIAEGTIEVEDEGIAALEEMAS GKQSIKYIQSTGSSDDSALALLADITSKYRPGESKGQISEDDCASDPISKQVEGIEIVELQLSH VKDLFHCEKCNRSFKLFYHFKEHMKSHSTESFKCEICNKRYLRESAWKHHLNCYHLEEGGVSKK QRTGKKIHTCQYCEKQFDHFGHFKEHLRKHTGEKPFECSNCHERFARNSTLKCHLTACQTGVGA KKGRKKLYECQVCNSVFNSWDQFKDHLVIHTGDKPNHCTLCDLWFMQGNELRRHLSDAHNISER IVTEEVLSVETHLQTEPVTSMTIIEQVGKVHVLPLLQVQVDSAQVTVEQVHPDLLQDGQVHDSQ MSALPEQVQVSYLEVGRIQTEEGTEVHVEELHVERVNQMPVEVQTELLEADLDHMTPEMMSQEE SEPNHADAAMEEYEDTEGLETKPGEHSHAVKVDHDRTSMPVLE hide sequence

RefSeq Acc Id:	XP_006232023 ⟸ XM_006231961
- Peptide Label:	isoform X1
- UniProtKB:	B1WC22 (UniProtKB/TrEMBL), F7FPM3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEAEETMECLQEFPEHHKMILDRLNEQREQDRFTDITLIVDGHHFKAHKAVLAACSKFFYKFFQ EFTQEPLVEIEGVSKMAFRHLIEFTYTAKLMIQGEEEANDVWKAAEFLQMLEAIKALEVRNKEN SAPLEETTTGKNEAKKRKIAETSNVITESLPSAESEPVEIEVEIAEGTIEVEDEGIAALEEMAS GKQSIKYIQSTGSSDDSALALLADITSKYRPGESKGQISEDDCASDPISKQVEGIEIVELQLSH VKDLFHCEKCNRSFKLFYHFKEHMKSHSTESFKCEICNKRYLRESAWKHHLNCYHLEEGGVSKK QRTGKKIHTCQYCEKQFDHFGHFKEHLRKHTGEKPFECSNCHERFARNSTLKCHLTACQTGVGA KKGRKKLYECQVCNSVFNSWDQFKDHLVIHTGDKPNHCTLCDLWFMQGNELRRHLSDAHNISER IVTEEVLSVETHLQTEPVTSMTIIEQVGKVHVLPLLQVQVDSAQVTVEQVHPDLLQDGQVHDSQ MSALPEQVQVSYLEVGRIQTEEGTEVHVEELHVERVNQMPVEVQTELLEADLDHMTPEMMSQEE SEPNHADAAMEEYEDTEGLETKPGEHSHAVKVDHDRTSMPVLE hide sequence

Ensembl Acc Id:

ENSRNOP00000021608 ⟸ ENSRNOT00000021608

Ensembl Acc Id:

ENSRNOP00000070103 ⟸ ENSRNOT00000089303

RefSeq Acc Id:	XP_038958181 ⟸ XM_039102253
- Peptide Label:	isoform X4

Ensembl Acc Id:

ENSRNOP00000086042 ⟸ ENSRNOT00000107342

Ensembl Acc Id:

ENSRNOP00000089583 ⟸ ENSRNOT00000104695

RefSeq Acc Id:	XP_063137848 ⟸ XM_063281778
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2JX21 (UniProtKB/TrEMBL), A6I5X1 (UniProtKB/TrEMBL), A0A8I6AC93 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063137851 ⟸ XM_063281781
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2JX21 (UniProtKB/TrEMBL), A6I5X1 (UniProtKB/TrEMBL), A0A8I6AC93 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063137850 ⟸ XM_063281780
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2JX21 (UniProtKB/TrEMBL), A6I5X1 (UniProtKB/TrEMBL), A0A8I6AC93 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063137849 ⟸ XM_063281779
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2JX21 (UniProtKB/TrEMBL), A6I5X1 (UniProtKB/TrEMBL), A0A8I6AC93 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063137852 ⟸ XM_063281782
- Peptide Label:	isoform X3

Protein Domains

BTB C2H2-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B1WC22-F1-model_v2	AlphaFold	B1WC22	1-619	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13691159

Promoter ID:

EPDNEW_R1684

Type:

single initiation site

Name:

Zfp131_1

Description:

zinc finger protein 131

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	2	52,531,096 - 52,531,156	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307638	AgrOrtholog
BioCyc Gene	G2FUF-54272	BioCyc
Ensembl Genes	ENSRNOG00000015925	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000021608	ENTREZGENE
	ENSRNOT00000021608.8	UniProtKB/TrEMBL
	ENSRNOT00000089303	ENTREZGENE
	ENSRNOT00000089303.3	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
	Potassium Channel Kv1.1, Chain A	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7379163	IMAGE-MGC_LOAD
	IMAGE:9029363	IMAGE-MGC_LOAD
InterPro	BTB/POZ-like	UniProtKB/TrEMBL
	BTB/POZ_fold	UniProtKB/TrEMBL
	Znf_C2H2/integrase_DNA-bd	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
KEGG Report	rno:310375	UniProtKB/TrEMBL
MGC_CLONE	MGC:112898	IMAGE-MGC_LOAD
	MGC:187784	IMAGE-MGC_LOAD
NCBI Gene	310375	ENTREZGENE
PANTHER	ZINC FINGER PROTEIN	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN 131	UniProtKB/TrEMBL
Pfam	BTB	UniProtKB/TrEMBL
	zf-met	UniProtKB/TrEMBL
PhenoGen	Zfp131	PhenoGen
PROSITE	BTB	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000015925	RatGTEx
SMART	BTB	UniProtKB/TrEMBL
	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	BTB/POZ_fold	UniProtKB/TrEMBL
	SSF57667	UniProtKB/TrEMBL
UniProt	A0A0G2JX21	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AC93	ENTREZGENE
	A6I5X1	ENTREZGENE, UniProtKB/TrEMBL
	B1WC22	ENTREZGENE, UniProtKB/TrEMBL
	F7FPM3	ENTREZGENE, UniProtKB/TrEMBL
	Q4G013_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-12-06	Zfp131	zinc finger protein 131	Zfp131_predicted	zinc finger protein 131 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Zfp131_predicted	zinc finger protein 131 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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