Stard7 (StAR-related lipid transfer domain containing 7) - Rat Genome Database

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Gene: Stard7 (StAR-related lipid transfer domain containing 7) Rattus norvegicus
Analyze
Symbol: Stard7
Name: StAR-related lipid transfer domain containing 7
RGD ID: 1307613
Description: Predicted to enable molecular carrier activity. Predicted to act upstream of or within several processes, including establishment of skin barrier; mucociliary clearance; and myeloid dendritic cell activation. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in familial adult myoclonic epilepsy 2. Orthologous to human STARD7 (StAR related lipid transfer domain containing 7); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; amphetamine; flutamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC296128; StAR-related lipid transfer (START) domain containing 7; stAR-related lipid transfer protein 7, mitochondrial; START domain containing 7
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83134,935,602 - 134,969,140 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3134,940,471 - 134,969,168 (+)EnsemblGRCr8
mRatBN7.23114,487,161 - 114,515,828 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3114,485,600 - 114,515,813 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3118,378,715 - 118,407,260 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03126,974,259 - 127,002,811 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03124,634,639 - 124,663,185 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03119,698,655 - 119,727,303 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3119,698,652 - 119,727,347 (+)Ensemblrn6Rnor6.0
Rnor_5.03126,224,026 - 126,252,674 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43114,768,201 - 114,795,440 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3113,327,785 - 113,353,643 (+)NCBICelera
RGSC_v3.13114,671,196 - 114,702,430 (+)NCBI
Cytogenetic Map3q36NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:20042613   PMID:24270810   PMID:25980009   PMID:34800366  


Genomics

Comparative Map Data
Stard7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83134,935,602 - 134,969,140 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3134,940,471 - 134,969,168 (+)EnsemblGRCr8
mRatBN7.23114,487,161 - 114,515,828 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3114,485,600 - 114,515,813 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3118,378,715 - 118,407,260 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03126,974,259 - 127,002,811 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03124,634,639 - 124,663,185 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03119,698,655 - 119,727,303 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3119,698,652 - 119,727,347 (+)Ensemblrn6Rnor6.0
Rnor_5.03126,224,026 - 126,252,674 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43114,768,201 - 114,795,440 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3113,327,785 - 113,353,643 (+)NCBICelera
RGSC_v3.13114,671,196 - 114,702,430 (+)NCBI
Cytogenetic Map3q36NCBI
STARD7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38296,184,859 - 96,208,827 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl296,184,859 - 96,208,849 (-)Ensemblhg38GRCh38
GRCh37296,850,597 - 96,874,565 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36296,214,324 - 96,238,300 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34296,272,478 - 96,296,437NCBI
Celera291,291,407 - 91,315,383 (-)NCBICelera
Cytogenetic Map2q11.2NCBI
HuRef290,811,956 - 90,836,005 (-)NCBIHuRef
CHM1_1296,854,939 - 96,878,926 (-)NCBICHM1_1
T2T-CHM13v2.0296,691,466 - 96,715,435 (-)NCBIT2T-CHM13v2.0
Stard7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392127,112,123 - 127,140,855 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2127,112,138 - 127,140,852 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm382127,270,202 - 127,298,935 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2127,270,218 - 127,298,932 (+)Ensemblmm10GRCm38
MGSCv372127,095,965 - 127,124,670 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv362126,961,680 - 126,990,374 (+)NCBIMGSCv36mm8
Celera2128,509,611 - 128,538,273 (+)NCBICelera
Cytogenetic Map2F1NCBI
cM Map261.88NCBI
Stard7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554703,770,817 - 3,790,667 (-)Ensembl
ChiLan1.0NW_0049554703,771,410 - 3,790,667 (-)NCBIChiLan1.0ChiLan1.0
STARD7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21232,100,004 - 32,123,672 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A32,102,770 - 32,126,432 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A103,106,863 - 103,130,490 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A97,109,537 - 97,132,081 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A97,111,420 - 97,132,081 (-)EnsemblpanPan2panpan1.1
STARD7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11734,534,036 - 34,562,733 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1734,534,529 - 34,554,994 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1734,303,763 - 34,332,453 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01735,305,062 - 35,333,958 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1735,305,549 - 35,329,392 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11734,434,402 - 34,463,345 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01734,502,811 - 34,531,457 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01734,709,654 - 34,738,561 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Stard7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629283,049,295 - 83,076,182 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936744302,238 - 328,852 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936744302,238 - 329,189 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
STARD7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl346,992,777 - 47,019,206 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1346,992,708 - 47,017,668 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2349,121,946 - 49,159,690 (+)NCBISscrofa10.2Sscrofa10.2susScr3
STARD7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.114613,118 - 636,542 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl14611,299 - 636,499 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666041168,040,059 - 168,063,367 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Stard7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247492,294,141 - 2,312,559 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247492,289,591 - 2,312,423 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Stard7
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v15106,048,686 - 106,077,688 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Stard7
155 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:47
Count of miRNA genes:42
Interacting mature miRNAs:47
Transcripts:ENSRNOT00000066114
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1582233Insul10Insulin level QTL 105.40.0015blood insulin amount (VT:0001560)serum insulin level times blood glucose level (CMO:0002040)3133259579178259579Rat
2301414Kidm37Kidney mass QTL 370.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)396509147141509147Rat
1582238Bw68Body weight QTL 683.20.0064body mass (VT:0001259)body weight (CMO:0000012)373592512136118980Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)3129154923182114333Rat
1582239Epfw1Epididymal fat weight QTL 14.50.0006epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)373592512136118980Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)351581665184004958Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)367641776167835660Rat
1358362Srcrt2Stress Responsive Cort QTL 22.78blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)358601291153936591Rat
1582216Bw65Body weight QTL 656.3body mass (VT:0001259)body weight (CMO:0000012)3122654702136118980Rat
737818Hcar12Hepatocarcinoma resistance QTL 122.6liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)349872657138829559Rat
1582218Bw74Body weight QTL 743.90.0021body mass (VT:0001259)body weight (CMO:0000012)373592512136118980Rat
1582219Bw63Body weight QTL 633.80.001body mass (VT:0001259)body weight (CMO:0000012)3116582412136118980Rat
1582221Kidm30Kidney mass QTL 303.50.0008kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)385062224136118980Rat
1582210Bw71Body weight QTL 713.30.0012body mass (VT:0001259)body weight (CMO:0000012)385062224136118980Rat
7387306Bw124Body weight QTL 1243.20.0003body mass (VT:0001259)body weight (CMO:0000012)3104545086149545086Rat
1578754Stresp16Stress response QTL 1640.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)3133134628178134628Rat
1300111Rf12Renal function QTL 123.78renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)381425008141509147Rat
724523Tsu1Thymus enlargement suppressive QTL 13.84thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)370845569136091483Rat
1600376Arunc5Aerobic running capacity QTL 50.21exercise endurance trait (VT:0002332)longest distance run on treadmill (CMO:0001406)393829559138829559Rat
8694437Bw167Body weight QTL 16722.460.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)3112250810157250810Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)379649560177741895Rat
1581503Cm58Cardiac mass QTL 582.70.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)396509147141509147Rat
1354611Despr2Despair related QTL 23.030.0028locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)3117537367162537367Rat
2303620Vencon4Ventilatory control QTL 43.9respiration trait (VT:0001943)tidal volume (CMO:0000222)3125116475170116475Rat
631649Bp123Blood pressure QTL 1233.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3110225882155225882Rat
12879848Bw181Body weght QTL 1810.015body mass (VT:0001259)body weight (CMO:0000012)390755164141509147Rat
5686842Rf59Renal function QTL 59urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)3122395989167395989Rat
2301971Cm71Cardiac mass QTL 714.63heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)3131036586176036586Rat
1358885Bp251Blood pressure QTL 2513.8arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)31141509147Rat
2301970Bw81Body weight QTL 815.19body mass (VT:0001259)body weight (CMO:0000012)3131036586176036586Rat
1581546Pur13Proteinuria QTL 132.930.0335urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)398651826167012663Rat
631665Bw8Body weight QTL 85.5body mass (VT:0001259)body weight (CMO:0000012)3125814931139636791Rat
1331758Bp207Blood pressure QTL 2072.848arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3110634702155634702Rat
1358888Bp264Blood pressure QTL 2644.43arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)35675975141509147Rat
724532Cm17Cardiac mass QTL 172heart mass (VT:0007028)calculated heart weight (CMO:0000073)3116188400161188400Rat

Markers in Region
D11Mit209  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81776,809,265 - 76,809,379 (+)Marker Load Pipeline
mRatBN7.21771,899,823 - 71,899,938 (+)MAPPERmRatBN7.2
mRatBN7.23114,502,185 - 114,502,286 (+)MAPPERmRatBN7.2
Rnor_6.01775,830,171 - 75,830,285NCBIRnor6.0
Rnor_6.03119,713,666 - 119,713,764NCBIRnor6.0
Rnor_5.03126,239,037 - 126,239,135UniSTSRnor5.0
Rnor_5.01777,485,698 - 77,485,812UniSTSRnor5.0
RGSC_v3.41783,200,045 - 83,200,159UniSTSRGSC3.4
RGSC_v3.43114,783,212 - 114,783,310UniSTSRGSC3.4
Celera1771,359,238 - 71,359,352UniSTS
Cytogenetic Map3q36UniSTS
Cytogenetic Map17q12.3UniSTS
RH127881  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23114,515,433 - 114,515,651 (+)MAPPERmRatBN7.2
Rnor_6.03119,726,912 - 119,727,129NCBIRnor6.0
Rnor_5.03126,252,283 - 126,252,500UniSTSRnor5.0
RGSC_v3.43114,796,461 - 114,796,678UniSTSRGSC3.4
Celera3113,354,664 - 113,354,881UniSTS
RH 3.4 Map3997.5UniSTS
Cytogenetic Map3q36UniSTS
RH131518  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23114,503,239 - 114,503,430 (+)MAPPERmRatBN7.2
Rnor_6.03119,714,718 - 119,714,908NCBIRnor6.0
Rnor_5.03126,240,089 - 126,240,279UniSTSRnor5.0
RGSC_v3.43114,784,264 - 114,784,454UniSTSRGSC3.4
RH 3.4 Map3997.3UniSTS
Cytogenetic Map3q36UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000066114   ⟹   ENSRNOP00000059922
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3134,940,485 - 134,969,136 (+)Ensembl
mRatBN7.2 Ensembl3114,487,172 - 114,514,413 (+)Ensembl
Rnor_6.0 Ensembl3119,698,655 - 119,725,891 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000088834   ⟹   ENSRNOP00000070067
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3134,959,189 - 134,969,168 (+)Ensembl
mRatBN7.2 Ensembl3114,505,877 - 114,515,813 (+)Ensembl
Rnor_6.0 Ensembl3119,698,652 - 119,727,347 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000095321   ⟹   ENSRNOP00000097118
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3134,940,471 - 134,969,168 (+)Ensembl
mRatBN7.2 Ensembl3114,485,600 - 114,515,813 (+)Ensembl
RefSeq Acc Id: NM_001399278   ⟹   NP_001386207
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83134,940,477 - 134,969,140 (+)NCBI
mRatBN7.23114,487,161 - 114,515,828 (+)NCBI
RefSeq Acc Id: XM_063283329   ⟹   XP_063139399
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83134,935,602 - 134,958,694 (+)NCBI
RefSeq Acc Id: XR_010064580
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83134,935,602 - 134,960,156 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001386207 (Get FASTA)   NCBI Sequence Viewer  
  XP_063139399 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL80112 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000059922.3
  ENSRNOP00000070067.2
  ENSRNOP00000097118
  ENSRNOP00000097118.1
Ensembl Acc Id: ENSRNOP00000059922   ⟸   ENSRNOT00000066114
Ensembl Acc Id: ENSRNOP00000070067   ⟸   ENSRNOT00000088834
Ensembl Acc Id: ENSRNOP00000097118   ⟸   ENSRNOT00000095321
RefSeq Acc Id: NP_001386207   ⟸   NM_001399278
- UniProtKB: A0A8I6ATX5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063139399   ⟸   XM_063283329
- Peptide Label: isoform X1
Protein Domains
START

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2JWY8-F1-model_v2 AlphaFold A0A0G2JWY8 1-373 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13692401
Promoter ID:EPDNEW_R2926
Type:initiation region
Name:Stard7_1
Description:StAR-related lipid transfer domain containing 7
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R2927  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.03119,698,660 - 119,698,720EPDNEW
RGD ID:13692402
Promoter ID:EPDNEW_R2927
Type:initiation region
Name:Stard7_2
Description:StAR-related lipid transfer domain containing 7
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R2926  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.03119,699,151 - 119,699,211EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1307613 AgrOrtholog
BioCyc Gene G2FUF-47998 BioCyc
Ensembl Genes ENSRNOG00000013479 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000066114.4 UniProtKB/TrEMBL
  ENSRNOT00000088834.3 UniProtKB/TrEMBL
  ENSRNOT00000095321 ENTREZGENE
  ENSRNOT00000095321.2 UniProtKB/TrEMBL
Gene3D-CATH 3.30.530.20 UniProtKB/TrEMBL
InterPro START-like_dom UniProtKB/TrEMBL
  START_lipid-bd UniProtKB/TrEMBL
  START_lipid_transfer UniProtKB/TrEMBL
  START_STARD7 UniProtKB/TrEMBL
NCBI Gene 296128 ENTREZGENE
PANTHER PHOSPHATIDYLCHOLINE TRANSFER PROTEIN UniProtKB/TrEMBL
  STAR-RELATED LIPID TRANSFER PROTEIN 7, MITOCHONDRIAL UniProtKB/TrEMBL
Pfam START UniProtKB/TrEMBL
PhenoGen Stard7 PhenoGen
PROSITE START UniProtKB/TrEMBL
RatGTEx ENSRNOG00000013479 RatGTEx
SMART START UniProtKB/TrEMBL
Superfamily-SCOP Bet v1-like UniProtKB/TrEMBL
UniProt A0A0G2JWY8_RAT UniProtKB/TrEMBL
  A0A8I6ATX5 ENTREZGENE, UniProtKB/TrEMBL
  D3ZXY9_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-12 Stard7  StAR-related lipid transfer domain containing 7  Stard7  StAR-related lipid transfer (START) domain containing 7  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-10-23 Stard7  StAR-related lipid transfer (START) domain containing 7  Stard7  START domain containing 7   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Stard7  START domain containing 7   Stard7_predicted  START domain containing 7 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Stard7_predicted  START domain containing 7 (predicted)      Symbol and Name status set to approved 70820 APPROVED