Yju2b (YJU2 splicing factor homolog B) - Rat Genome Database

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Gene: Yju2b (YJU2 splicing factor homolog B) Rattus norvegicus
Analyze
Symbol: Yju2b
Name: YJU2 splicing factor homolog B
RGD ID: 1307598
Description: Predicted to be involved in RNA splicing and response to virus. Predicted to be part of U2-type spliceosomal complex and post-mRNA release spliceosomal complex. Orthologous to human YJU2B (YJU2 splicing factor homolog B); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Ccdc130; coiled-coil domain containing 130; coiled-coil domain-containing protein 130; LOC304656; MGC125030; probable splicing factor YJU2B; RGD1307598; similar to RIKEN cDNA 4930527D15
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81940,799,392 - 40,810,885 (+)NCBIGRCr8
mRatBN7.21923,894,587 - 23,906,084 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1923,894,649 - 23,906,077 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1930,719,344 - 30,727,131 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01931,373,753 - 31,381,540 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01933,596,498 - 33,604,286 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01925,367,552 - 25,378,993 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1925,367,543 - 25,378,974 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01936,343,726 - 36,355,150 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41925,582,029 - 25,589,845 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11925,570,050 - 25,589,046 (+)NCBI
Celera1923,447,125 - 23,454,940 (+)NCBICelera
Cytogenetic Map19q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:3203696   PMID:12477932   PMID:15489334   PMID:16854843  


Genomics

Comparative Map Data
Yju2b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81940,799,392 - 40,810,885 (+)NCBIGRCr8
mRatBN7.21923,894,587 - 23,906,084 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1923,894,649 - 23,906,077 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1930,719,344 - 30,727,131 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01931,373,753 - 31,381,540 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01933,596,498 - 33,604,286 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01925,367,552 - 25,378,993 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1925,367,543 - 25,378,974 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01936,343,726 - 36,355,150 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41925,582,029 - 25,589,845 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11925,570,050 - 25,589,046 (+)NCBI
Celera1923,447,125 - 23,454,940 (+)NCBICelera
Cytogenetic Map19q11NCBI
YJU2B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381913,731,752 - 13,763,289 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1913,731,760 - 13,763,296 (+)EnsemblGRCh38hg38GRCh38
GRCh371913,842,566 - 13,874,103 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361913,719,753 - 13,735,106 (+)NCBINCBI36Build 36hg18NCBI36
Celera1913,752,540 - 13,767,891 (+)NCBICelera
Cytogenetic Map19p13.13NCBI
HuRef1913,430,368 - 13,445,785 (+)NCBIHuRef
CHM1_11913,859,295 - 13,874,649 (+)NCBICHM1_1
T2T-CHM13v2.01913,857,964 - 13,889,514 (+)NCBIT2T-CHM13v2.0
Yju2b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39884,984,396 - 84,997,087 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl884,984,424 - 84,997,009 (-)EnsemblGRCm39 Ensembl
GRCm38884,257,767 - 84,270,458 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl884,257,795 - 84,270,380 (-)EnsemblGRCm38mm10GRCm38
MGSCv37886,781,694 - 86,794,259 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36887,147,900 - 87,160,465 (-)NCBIMGSCv36mm8
Celera888,559,931 - 88,572,477 (-)NCBICelera
Cytogenetic Map8C2NCBI
cM Map840.77NCBI
Yju2b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541532,560,168 - 32,584,886 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541532,560,182 - 32,584,747 (+)NCBIChiLan1.0ChiLan1.0
YJU2B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22018,661,388 - 18,693,435 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11917,662,570 - 17,694,352 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01913,294,502 - 13,326,499 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11914,028,031 - 14,059,681 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1914,028,054 - 14,059,676 (+)Ensemblpanpan1.1panPan2
YJU2B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12048,659,426 - 48,671,771 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2048,659,652 - 48,669,329 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2048,533,386 - 48,545,729 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02049,177,579 - 49,189,910 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2049,177,590 - 49,189,840 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12048,388,002 - 48,400,791 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02048,814,890 - 48,827,232 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02049,057,988 - 49,070,333 (-)NCBIUU_Cfam_GSD_1.0
Yju2b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118207,828,313 - 207,841,611 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366592,515,747 - 2,525,799 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366592,513,139 - 2,525,982 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
YJU2B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl265,353,578 - 65,372,085 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1265,355,921 - 65,372,120 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2265,683,170 - 65,699,421 (-)NCBISscrofa10.2Sscrofa10.2susScr3
YJU2B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1612,408,839 - 12,423,920 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl612,409,702 - 12,423,968 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660747,264,376 - 7,279,381 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Yju2b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249011,095,376 - 1,106,488 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249011,092,566 - 1,105,585 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Yju2b
35 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:138
Count of miRNA genes:110
Interacting mature miRNAs:119
Transcripts:ENSRNOT00000011150
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
7411590Foco7Food consumption QTL 76.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)19124688055Rat
10054132Srcrt9Stress Responsive Cort QTL 92.870.0017blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19127355345Rat
631678Cm9Cardiac mass QTL 94.270.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)19128982497Rat
631681Cm12Cardiac mass QTL 123.330.00053heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)19128982497Rat
1549847Bss8Bone structure and strength QTL 84lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)19131963836Rat
9590298Uminl5Urine mineral level QTL 53.590.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)19136824771Rat
8552935Pigfal10Plasma insulin-like growth factor 1 level QTL 105.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)19136824771Rat
9590250Scort11Serum corticosterone level QTL 1123.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19136824771Rat
9590090Insglur8Insulin/glucose ratio QTL 810.810.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)19136824771Rat
9589102Slep13Serum leptin concentration QTL 134.630.001blood leptin amount (VT:0005667)plasma leptin level (CMO:0000781)1956937445569374Rat
8694186Bw152Body weight QTL 1523.340.001body mass (VT:0001259)body weight gain (CMO:0000420)1956937445569374Rat
7247442Uae39Urinary albumin excretion QTL 39urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19218792746708701Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19218792756457239Rat
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)19231612147316121Rat
2317848Alcrsp21Alcohol response QTL 211.8999999761581420.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)19320477748204777Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
724518Uae19Urinary albumin excretion QTL 195.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19745724942983518Rat
724565Tcas5Tongue tumor susceptibility QTL 510.04tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)19997775339654489Rat
61423Cia14Collagen induced arthritis QTL 143joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)191082797043544039Rat
61407Scl12Serum cholesterol level QTL 120.001blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)191392640130303727Rat
1558656Prcs1Prostate cancer susceptibility QTL 15prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)191511459834521833Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)191545586057337602Rat
1331788Rf45Renal function QTL 452.818kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)191560502346559041Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)191563020157337602Rat
2298478Eau8Experimental allergic uveoretinitis QTL 80.0163uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)191715443357337602Rat
61350Bp32Blood pressure QTL 320.012arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)192048357557337602Rat

Markers in Region
RH126162  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.01936,343,813 - 36,344,047NCBIRnor5.0
RGSC_v3.41925,589,539 - 25,589,772UniSTSRGSC3.4
Celera1923,454,634 - 23,454,867UniSTS
Cytogenetic Map19q11UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 12 10 4 9 4 66 24 40 10
Low 31 47 37 10 37 8 11 8 11 1 1 8
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000011150   ⟹   ENSRNOP00000011150
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1923,894,649 - 23,906,077 (+)Ensembl
Rnor_6.0 Ensembl1925,367,543 - 25,378,974 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000096739   ⟹   ENSRNOP00000082392
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1923,894,713 - 23,906,077 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000104713   ⟹   ENSRNOP00000085853
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1923,894,649 - 23,905,461 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000114282   ⟹   ENSRNOP00000092066
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1923,899,876 - 23,906,077 (+)Ensembl
RefSeq Acc Id: NM_001037644   ⟹   NP_001032733
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81940,803,055 - 40,810,870 (+)NCBI
mRatBN7.21923,898,250 - 23,906,065 (+)NCBI
Rnor_6.01925,367,553 - 25,375,368 (-)NCBI
Rnor_5.01936,343,726 - 36,355,150 (-)NCBI
RGSC_v3.41925,582,029 - 25,589,845 (+)RGD
Celera1923,447,125 - 23,454,940 (+)RGD
Sequence:
RefSeq Acc Id: XM_006255252   ⟹   XP_006255314
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81940,799,393 - 40,810,885 (+)NCBI
mRatBN7.21923,894,587 - 23,906,084 (+)NCBI
Rnor_6.01925,367,552 - 25,378,993 (-)NCBI
Rnor_5.01936,343,726 - 36,355,150 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006255253   ⟹   XP_006255315
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81940,805,158 - 40,810,885 (+)NCBI
mRatBN7.21923,894,587 - 23,906,084 (+)NCBI
Rnor_6.01925,367,552 - 25,378,993 (-)NCBI
Rnor_5.01936,343,726 - 36,355,150 (-)NCBI
Sequence:
RefSeq Acc Id: XM_063277967   ⟹   XP_063134037
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81940,799,543 - 40,810,885 (+)NCBI
RefSeq Acc Id: XM_063277968   ⟹   XP_063134038
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81940,799,392 - 40,809,915 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_001032733   ⟸   NM_001037644
- UniProtKB: Q32PZ9 (UniProtKB/Swiss-Prot),   A6IY97 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006255315   ⟸   XM_006255253
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006255314   ⟸   XM_006255252
- Peptide Label: isoform X1
- UniProtKB: Q32PZ9 (UniProtKB/Swiss-Prot),   A6IY97 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000011150   ⟸   ENSRNOT00000011150
RefSeq Acc Id: ENSRNOP00000085853   ⟸   ENSRNOT00000104713
RefSeq Acc Id: ENSRNOP00000082392   ⟸   ENSRNOT00000096739
RefSeq Acc Id: ENSRNOP00000092066   ⟸   ENSRNOT00000114282
RefSeq Acc Id: XP_063134038   ⟸   XM_063277968
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063134037   ⟸   XM_063277967
- Peptide Label: isoform X1
- UniProtKB: Q32PZ9 (UniProtKB/Swiss-Prot),   A6IY97 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q32PZ9-F1-model_v2 AlphaFold Q32PZ9 1-385 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13701018
Promoter ID:EPDNEW_R11542
Type:multiple initiation site
Name:Ccdc130_1
Description:coiled-coil domain containing 130
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01925,378,917 - 25,378,977EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1307598 AgrOrtholog
BioCyc Gene G2FUF-6100 BioCyc
Ensembl Genes ENSRNOG00000008319 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSRNOG00055008092 UniProtKB/Swiss-Prot
  ENSRNOG00060013229 UniProtKB/Swiss-Prot
  ENSRNOG00065010004 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000011150.8 UniProtKB/Swiss-Prot
  ENSRNOT00000096739.1 UniProtKB/TrEMBL
  ENSRNOT00000104713.1 UniProtKB/TrEMBL
  ENSRNOT00000114282 ENTREZGENE
  ENSRNOT00000114282.1 UniProtKB/Swiss-Prot
  ENSRNOT00055013695 UniProtKB/Swiss-Prot
  ENSRNOT00055013705 UniProtKB/Swiss-Prot
  ENSRNOT00060022550 UniProtKB/Swiss-Prot
  ENSRNOT00060022554 UniProtKB/Swiss-Prot
  ENSRNOT00065016103 UniProtKB/Swiss-Prot
  ENSRNOT00065016111 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7460239 IMAGE-MGC_LOAD
InterPro Saf4/Yju2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:304656 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE MGC:125030 IMAGE-MGC_LOAD
NCBI Gene 304656 ENTREZGENE
PANTHER COILED-COIL DOMAIN-CONTAINING PROTEIN 130 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12111 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DUF572 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Yju2b PhenoGen
RatGTEx ENSRNOG00000008319 RatGTEx
  ENSRNOG00055008092 RatGTEx
  ENSRNOG00060013229 RatGTEx
  ENSRNOG00065010004 RatGTEx
UniProt A0A8I5ZWY1_RAT UniProtKB/TrEMBL
  A0A8I6GDF3_RAT UniProtKB/TrEMBL
  A6IY97 ENTREZGENE, UniProtKB/TrEMBL
  CC130_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-04-12 Yju2b  YJU2 splicing factor homolog B  Ccdc130  coiled-coil domain containing 130  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-07 Ccdc130  coiled-coil domain containing 130  RGD1307598  similar to RIKEN cDNA 4930527D15  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1307598  similar to RIKEN cDNA 4930527D15  RGD1307598_predicted  similar to RIKEN cDNA 4930527D15 (predicted)  Symbol and Name status set to approved 1299863 APPROVED
2005-01-20 RGD1307598_predicted  similar to RIKEN cDNA 4930527D15 (predicted)  LOC304656_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC304656_predicted  similar to RIKEN cDNA 4930527D15 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL