Rasal2 (RAS protein activator like 2) - Rat Genome Database

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Pathways
Gene: Rasal2 (RAS protein activator like 2) Rattus norvegicus
Analyze
Symbol: Rasal2
Name: RAS protein activator like 2
RGD ID: 1307566
Description: Predicted to enable GTPase activator activity. Predicted to be involved in several processes, including adipose tissue development; response to dietary excess; and response to glucose. Orthologous to human RASAL2 (RAS protein activator like 2); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC304893; ras GTPase-activating protein nGAP
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81371,808,740 - 72,102,723 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1371,813,261 - 72,102,723 (-)EnsemblGRCr8
mRatBN7.21369,279,882 - 69,569,161 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1369,258,622 - 69,569,940 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1371,846,853 - 72,136,113 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01373,161,821 - 73,451,044 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01370,423,312 - 70,712,531 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01374,770,557 - 75,059,298 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1374,771,522 - 75,059,326 (-)Ensemblrn6Rnor6.0
Rnor_5.01379,688,195 - 79,976,930 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41372,381,047 - 72,534,202 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1369,114,622 - 69,264,415 (-)NCBICelera
RGSC_v3.11372,395,925 - 72,686,393 (-)NCBI
Cytogenetic Map13q22NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
2,4-dinitrotoluene  (EXP)
2-hydroxypropanoic acid  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
6-propyl-2-thiouracil  (EXP)
aflatoxin B1  (EXP,ISO)
aflatoxin M1  (ISO)
all-trans-retinoic acid  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (EXP)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
Butylbenzyl phthalate  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
caffeine  (ISO)
chlorpyrifos  (ISO)
cisplatin  (ISO)
copper(II) sulfate  (ISO)
coumarin  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
cylindrospermopsin  (ISO)
dimethyl sulfoxide  (ISO)
doxorubicin  (ISO)
epoxiconazole  (ISO)
FR900359  (ISO)
fulvestrant  (ISO)
glyphosate  (ISO)
hydrogen peroxide  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
ozone  (ISO)
paracetamol  (EXP)
phenobarbital  (ISO)
pirinixic acid  (ISO)
potassium chromate  (ISO)
rac-lactic acid  (ISO)
rotenone  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
simazine  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
tebuconazole  (ISO)
theophylline  (ISO)
thiram  (ISO)
titanium dioxide  (ISO)
tributylstannane  (EXP)
trichostatin A  (ISO)
valproic acid  (EXP,ISO)
verteporfin  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:25931508  


Genomics

Comparative Map Data
Rasal2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81371,808,740 - 72,102,723 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1371,813,261 - 72,102,723 (-)EnsemblGRCr8
mRatBN7.21369,279,882 - 69,569,161 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1369,258,622 - 69,569,940 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1371,846,853 - 72,136,113 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01373,161,821 - 73,451,044 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01370,423,312 - 70,712,531 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01374,770,557 - 75,059,298 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1374,771,522 - 75,059,326 (-)Ensemblrn6Rnor6.0
Rnor_5.01379,688,195 - 79,976,930 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41372,381,047 - 72,534,202 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1369,114,622 - 69,264,415 (-)NCBICelera
RGSC_v3.11372,395,925 - 72,686,393 (-)NCBI
Cytogenetic Map13q22NCBI
RASAL2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381178,094,104 - 178,478,850 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1178,093,768 - 178,484,147 (+)Ensemblhg38GRCh38
GRCh371178,063,239 - 178,447,985 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361176,330,253 - 176,710,181 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341174,795,286 - 175,175,212NCBI
Celera1151,171,756 - 151,557,813 (+)NCBICelera
Cytogenetic Map1q25.2NCBI
HuRef1149,290,237 - 149,676,448 (+)NCBIHuRef
CHM1_11179,486,733 - 179,872,515 (+)NCBICHM1_1
T2T-CHM13v2.01177,448,790 - 177,833,573 (+)NCBIT2T-CHM13v2.0
Rasal2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391156,962,759 - 157,240,170 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1156,962,752 - 157,240,165 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381157,135,183 - 157,412,595 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1157,135,182 - 157,412,595 (-)Ensemblmm10GRCm38
MGSCv371159,065,314 - 159,342,726 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361159,070,842 - 159,342,069 (-)NCBIMGSCv36mm8
Celera1159,539,962 - 159,820,171 (-)NCBICelera
Cytogenetic Map1H1NCBI
cM Map167.97NCBI
Rasal2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540617,603,377 - 17,910,464 (+)Ensembl
ChiLan1.0NW_00495540617,602,584 - 17,904,611 (+)NCBIChiLan1.0ChiLan1.0
RASAL2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2171,256,809 - 71,633,419 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1170,927,422 - 71,302,793 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01153,609,277 - 153,986,155 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11157,302,891 - 157,676,050 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1157,303,646 - 157,670,415 (+)EnsemblpanPan2panpan1.1
RASAL2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1721,243,984 - 21,591,932 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl721,222,089 - 21,591,973 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha720,770,373 - 21,118,261 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0720,982,842 - 21,331,201 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl720,987,398 - 21,331,779 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1720,889,826 - 21,237,535 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0720,997,571 - 21,345,351 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0721,132,975 - 21,480,958 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Rasal2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934492,512,991 - 92,841,673 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648110,365,303 - 10,688,578 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493648110,358,673 - 10,688,535 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RASAL2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9119,941,862 - 120,325,316 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.19119,941,303 - 120,329,817 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29131,867,893 - 132,014,192 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RASAL2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12550,838,985 - 51,211,683 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2550,840,184 - 50,941,942 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605552,368,944 - 52,763,158 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rasal2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247713,797,187 - 4,126,379 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247713,791,337 - 4,125,982 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Rasal2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11036,485,362 - 36,754,830 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Rasal2
1727 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:82
Count of miRNA genes:68
Interacting mature miRNAs:73
Transcripts:ENSRNOT00000033324
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134863963493639634Rat
10755495Bp387Blood pressure QTL 3873.78arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133721624190057603Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1338975045103588154Rat
8655951Rf63Renal function QTL 6312.2blood urea nitrogen amount (VT:0005265)plasma urea nitrogen level (CMO:0000586)1371610804109350286Rat
70220Bp55Blood pressure QTL 555.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133992469384924693Rat
8655945Rf61Renal function QTL 613.6blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)137161080489333251Rat
71119Thym2Thymus enlargement QTL 23.8thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)134874981487285480Rat
4889861Pur29Proteinuria QTL 2913.80.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)133996821183286298Rat
1331783Bp221Blood pressure QTL 2213.72886arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)137161080489333251Rat
1300166Kidm6Kidney mass QTL 63.93kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)137161080489333251Rat
2293687Bss26Bone structure and strength QTL 264.60.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1367635937109350286Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13742179187286911Rat
61340Bp25Blood pressure QTL 254.20.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133708798382087983Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13600200888706694Rat
1549897Stresp12Stress response QTL 123.35stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)134098358585983585Rat
724564Uae11Urinary albumin excretion QTL 115.7urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)134735425894285672Rat
738027Lnnr6Liver neoplastic nodule remodeling QTL 63.3liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)1365613454109350286Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1321120177109350286Rat
7387280Uae43Urinary albumin excretion QTL 435.690.4174urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1368983334109350286Rat
738026Lnnr5Liver neoplastic nodule remodeling QTL 53.29liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)136242459288113509Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133379409678794096Rat
2293702Bss34Bone structure and strength QTL 344.610.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1367635937109350286Rat
61349Bp31Blood pressure QTL 315.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133992469384924693Rat
1576318Schws5Schwannoma susceptibility QTL 50.0351nervous system integrity trait (VT:0010566)post-insult time to trigeminal nerve neurilemmoma formation (CMO:0002019)1364497900109350286Rat
2303563Bw89Body weight QTL 896body mass (VT:0001259)body weight (CMO:0000012)133483494779834947Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1311081740103588154Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13600200888706694Rat
12879477Bp401Blood pressure QTL 401arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133981472684814726Rat
1331750Bp220Blood pressure QTL 2202.98arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133996821184968211Rat
12879475Bp400Blood pressure QTL 400arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1364375743109350286Rat
11530006Niddm72Non-insulin dependent diabetes mellitus QTL 720.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)133828629883286298Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131103588154Rat
2293341Glom15Glomerulus QTL 159.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1367635937109350286Rat

Markers in Region
D13Got51  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21369,535,761 - 69,535,887 (+)MAPPERmRatBN7.2
Rnor_6.01375,026,588 - 75,026,713NCBIRnor6.0
Rnor_5.01379,943,650 - 79,943,775UniSTSRnor5.0
RGSC_v3.41372,638,816 - 72,638,941RGDRGSC3.4
RGSC_v3.41372,638,816 - 72,638,941UniSTSRGSC3.4
Celera1369,366,174 - 69,366,299UniSTS
RGSC_v3.11372,653,004 - 72,653,129RGD
RH 3.4 Map13403.5UniSTS
RH 3.4 Map13403.5RGD
RH 2.0 Map13502.1RGD
Cytogenetic Map13q22UniSTS
AU048429  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21369,402,608 - 69,402,711 (+)MAPPERmRatBN7.2
Rnor_6.01374,894,161 - 74,894,263NCBIRnor6.0
Rnor_5.01379,811,241 - 79,811,343UniSTSRnor5.0
RGSC_v3.41372,505,176 - 72,505,278UniSTSRGSC3.4
Celera1369,235,398 - 69,235,498UniSTS
Cytogenetic Map13q22UniSTS
AU048512  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21369,357,282 - 69,357,452 (+)MAPPERmRatBN7.2
Rnor_6.01374,848,863 - 74,849,030NCBIRnor6.0
Rnor_5.01379,765,943 - 79,766,110UniSTSRnor5.0
RGSC_v3.41372,459,850 - 72,460,017UniSTSRGSC3.4
Celera1369,190,074 - 69,190,241UniSTS
Cytogenetic Map13q22UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 76 59 6 339 176 11 144 80 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001401195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001401196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006250065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006250066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006250067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008769638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017598813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017598814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017598815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039090766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272344 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272345 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272346 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272347 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063272348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH473958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000033324   ⟹   ENSRNOP00000033372
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1371,813,455 - 71,930,835 (-)Ensembl
mRatBN7.2 Ensembl1369,280,371 - 69,431,635 (-)Ensembl
Rnor_6.0 Ensembl1374,771,522 - 74,923,402 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000089062   ⟹   ENSRNOP00000068634
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1371,813,455 - 71,904,106 (-)Ensembl
mRatBN7.2 Ensembl1369,280,371 - 69,337,674 (-)Ensembl
Rnor_6.0 Ensembl1374,772,015 - 75,059,326 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000102068   ⟹   ENSRNOP00000089478
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1371,813,455 - 72,102,723 (-)Ensembl
mRatBN7.2 Ensembl1369,283,166 - 69,569,940 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000103896   ⟹   ENSRNOP00000092478
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1371,813,261 - 72,102,723 (-)Ensembl
mRatBN7.2 Ensembl1369,258,622 - 69,569,940 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000106934   ⟹   ENSRNOP00000083854
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1371,813,455 - 72,102,723 (-)Ensembl
mRatBN7.2 Ensembl1369,258,622 - 69,569,940 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000137660   ⟹   ENSRNOP00000109186
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1371,813,455 - 71,917,576 (-)Ensembl
RefSeq Acc Id: NM_001401195   ⟹   NP_001388124
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81371,813,455 - 72,102,723 (-)NCBI
mRatBN7.21369,279,882 - 69,569,161 (-)NCBI
RefSeq Acc Id: NM_001401196   ⟹   NP_001388125
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81371,813,455 - 72,102,723 (-)NCBI
mRatBN7.21369,279,882 - 69,569,161 (-)NCBI
RefSeq Acc Id: XM_006250065   ⟹   XP_006250127
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81371,808,740 - 71,904,436 (-)NCBI
mRatBN7.21369,279,882 - 69,370,875 (-)NCBI
Rnor_6.01374,770,557 - 74,862,509 (-)NCBI
Rnor_5.01379,688,195 - 79,976,930 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006250066   ⟹   XP_006250128
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81371,808,740 - 71,931,324 (-)NCBI
mRatBN7.21369,279,882 - 69,401,573 (-)NCBI
Rnor_6.01374,770,557 - 74,889,969 (-)NCBI
Rnor_5.01379,688,195 - 79,976,930 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006250067   ⟹   XP_006250129
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81371,808,740 - 71,904,631 (-)NCBI
mRatBN7.21369,279,882 - 69,371,050 (-)NCBI
Rnor_6.01374,770,557 - 74,865,655 (-)NCBI
Rnor_5.01379,688,195 - 79,976,930 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008769638   ⟹   XP_008767860
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81371,808,740 - 72,102,567 (-)NCBI
mRatBN7.21369,279,882 - 69,568,647 (-)NCBI
Rnor_6.01374,770,557 - 75,059,298 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017598813   ⟹   XP_017454302
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81371,808,740 - 72,102,567 (-)NCBI
mRatBN7.21369,279,882 - 69,568,647 (-)NCBI
Rnor_6.01374,770,557 - 75,059,298 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039090764   ⟹   XP_038946692
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81371,808,740 - 71,904,574 (-)NCBI
mRatBN7.21369,279,882 - 69,371,005 (-)NCBI
RefSeq Acc Id: XM_039090765   ⟹   XP_038946693
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81371,808,740 - 71,929,585 (-)NCBI
mRatBN7.21369,279,882 - 69,383,749 (-)NCBI
RefSeq Acc Id: XM_039090766   ⟹   XP_038946694
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81371,808,740 - 71,931,335 (-)NCBI
mRatBN7.21369,279,882 - 69,401,577 (-)NCBI
RefSeq Acc Id: XM_063272344   ⟹   XP_063128414
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81371,808,740 - 71,929,583 (-)NCBI
RefSeq Acc Id: XM_063272345   ⟹   XP_063128415
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81371,808,740 - 71,929,583 (-)NCBI
RefSeq Acc Id: XM_063272346   ⟹   XP_063128416
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81371,808,740 - 71,931,321 (-)NCBI
RefSeq Acc Id: XM_063272347   ⟹   XP_063128417
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81371,808,740 - 71,904,464 (-)NCBI
RefSeq Acc Id: XM_063272348   ⟹   XP_063128418
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81371,834,036 - 72,102,567 (-)NCBI
RefSeq Acc Id: XP_006250128   ⟸   XM_006250066
- Peptide Label: isoform X6
- UniProtKB: A0A8I6ABU3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006250129   ⟸   XM_006250067
- Peptide Label: isoform X12
- UniProtKB: A0A8I6ABU3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006250127   ⟸   XM_006250065
- Peptide Label: isoform X5
- UniProtKB: A0A8I6ABU3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008767860   ⟸   XM_008769638
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ABU3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017454302   ⟸   XM_017598813
- Peptide Label: isoform X2
- UniProtKB: A0A8I6ABU3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000068634   ⟸   ENSRNOT00000089062
Ensembl Acc Id: ENSRNOP00000033372   ⟸   ENSRNOT00000033324
RefSeq Acc Id: XP_038946694   ⟸   XM_039090766
- Peptide Label: isoform X11
- UniProtKB: A0A8I6ABU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038946693   ⟸   XM_039090765
- Peptide Label: isoform X10
- UniProtKB: A0A8I6ABU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038946692   ⟸   XM_039090764
- Peptide Label: isoform X9
- UniProtKB: A0A8I6ABU3 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000092478   ⟸   ENSRNOT00000103896
Ensembl Acc Id: ENSRNOP00000083854   ⟸   ENSRNOT00000106934
Ensembl Acc Id: ENSRNOP00000089478   ⟸   ENSRNOT00000102068
RefSeq Acc Id: NP_001388125   ⟸   NM_001401196
- Peptide Label: isoform 2
- UniProtKB: A0A8I6AI87 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001388124   ⟸   NM_001401195
- Peptide Label: isoform 1
- UniProtKB: A0A8I5ZWM6 (UniProtKB/TrEMBL),   A0A8I6AI87 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128416   ⟸   XM_063272346
- Peptide Label: isoform X7
- UniProtKB: A0A8I6AI87 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128415   ⟸   XM_063272345
- Peptide Label: isoform X4
- UniProtKB: A0A8I6ABU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128414   ⟸   XM_063272344
- Peptide Label: isoform X3
- UniProtKB: A0A8I6ABU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128417   ⟸   XM_063272347
- Peptide Label: isoform X8
- UniProtKB: A0A8I6ABU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128418   ⟸   XM_063272348
- Peptide Label: isoform X13
- UniProtKB: A0A8I6ABU3 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000109186   ⟸   ENSRNOT00000137660

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2JTA7-F1-model_v2 AlphaFold A0A0G2JTA7 1-1279 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1307566 AgrOrtholog
BioCyc Gene G2FUF-17796 BioCyc
Ensembl Genes ENSRNOG00000004917 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000033324 ENTREZGENE
  ENSRNOT00000033324.7 UniProtKB/TrEMBL
  ENSRNOT00000089062 ENTREZGENE
  ENSRNOT00000089062.3 UniProtKB/TrEMBL
  ENSRNOT00000102068 ENTREZGENE
  ENSRNOT00000102068.2 UniProtKB/TrEMBL
  ENSRNOT00000103896 ENTREZGENE
  ENSRNOT00000103896.2 UniProtKB/TrEMBL
  ENSRNOT00000106934.2 UniProtKB/TrEMBL
  ENSRNOT00000137660.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.506.20 UniProtKB/TrEMBL
  2.60.40.150 UniProtKB/TrEMBL
  GTPase Activation - p120gap, domain 1 UniProtKB/TrEMBL
InterPro C2_Ca-dep UniProtKB/TrEMBL
  C2_domain_sf UniProtKB/TrEMBL
  DUF3498 UniProtKB/TrEMBL
  Pleckstrin_homology UniProtKB/TrEMBL
  Ras_GTPase UniProtKB/TrEMBL
  RasGAP UniProtKB/TrEMBL
  RasGAP_CS UniProtKB/TrEMBL
  Rho_GTPase_activation_prot UniProtKB/TrEMBL
NCBI Gene 304893 ENTREZGENE
PANTHER PTHR10194 UniProtKB/TrEMBL
  RAS GTPASE-ACTIVATING PROTEIN NGAP UniProtKB/TrEMBL
Pfam DUF3498 UniProtKB/TrEMBL
  PF00168 UniProtKB/TrEMBL
  PH_RASGAP UniProtKB/TrEMBL
  RasGAP UniProtKB/TrEMBL
PhenoGen Rasal2 PhenoGen
PROSITE PH_DOMAIN UniProtKB/TrEMBL
  PS50004 UniProtKB/TrEMBL
  RAS_GTPASE_ACTIV_1 UniProtKB/TrEMBL
  RAS_GTPASE_ACTIV_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000004917 RatGTEx
SMART RasGAP UniProtKB/TrEMBL
  SM00233 UniProtKB/TrEMBL
  SM00239 UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
  Rho_GAP UniProtKB/TrEMBL
  SSF49562 UniProtKB/TrEMBL
UniProt A0A0G2JTA7_RAT UniProtKB/TrEMBL
  A0A8I5ZWM6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6ABU3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AI87 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LUZ4_RAT UniProtKB/TrEMBL
  D4AAY3_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Rasal2  RAS protein activator like 2   Rasal2_predicted  RAS protein activator like 2 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Rasal2_predicted  RAS protein activator like 2 (predicted)      Symbol and Name status set to approved 70820 APPROVED