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Gene: Ing2 (inhibitor of growth family, member 2) Rattus norvegicus

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Symbol:

Ing2

Name:

inhibitor of growth family, member 2

RGD ID:

1307347

Description:

Predicted to enable DNA binding activity; histone H3K4me3 reader activity; and phosphatidylinositol binding activity. Predicted to be involved in several processes, including positive regulation of transforming growth factor beta receptor signaling pathway; seminiferous tubule development; and spermatogenesis. Predicted to act upstream of or within negative regulation of apoptotic signaling pathway. Predicted to be located in plasma membrane. Predicted to be part of CCAAT-binding activity factor complex and Sin3-type complex. Predicted to be active in nucleus. Orthologous to human ING2 (inhibitor of growth family member 2); PARTICIPATES IN histone modification pathway; INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

Ing1l; inhibitor of growth family, member 1-like; inhibitor of growth protein 2; LOC290744

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ING2 (inhibitor of growth family member 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Ing2 (inhibitor of growth family, member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ing2 (inhibitor of growth family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ING2 (inhibitor of growth family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ING2 (inhibitor of growth family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ing2 (inhibitor of growth family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ING2 (inhibitor of growth family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ING2 (inhibitor of growth family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ing2 (inhibitor of growth family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Ing2 (inhibitor of growth family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	MRPL1 (mitochondrial ribosomal protein L1)	HGNC	OMA
Alliance orthologs ³
Mus musculus (house mouse):	Ing2 (inhibitor of growth family, member 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	ING2 (inhibitor of growth family member 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ing2 (inhibitor of growth family, member 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	PHO23	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|OrthoInspector\|PANTHER)
Saccharomyces cerevisiae (baker's yeast):	PHO23	Alliance	DIOPT (Ensembl Compara\|OrthoInspector\|PANTHER)
Drosophila melanogaster (fruit fly):	CG7379	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	ing-3	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector)
Caenorhabditis elegans (roundworm):	lsy-13	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA)
Caenorhabditis elegans (roundworm):	lsy-13	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	YNG2	Alliance	DIOPT (InParanoid\|OMA\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	ing2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	51,305,311 - 51,316,177 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	16	51,307,466 - 51,316,177 (+)	Ensembl				GRCr8
mRatBN7.2	16	44,573,592 - 44,584,180 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	44,575,597 - 44,583,482 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	16	49,981,914 - 49,989,799 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	53,342,471 - 53,350,356 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	48,617,653 - 48,625,543 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	47,714,756 - 47,725,836 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	47,717,951 - 47,725,836 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	16	47,434,528 - 47,445,331 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	16	47,785,534 - 47,793,419 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	16	42,587,118 - 42,595,003 (+)	NCBI		Celera
RGSC_v3.1	16	47,786,053 - 47,792,041 (+)	NCBI
Cytogenetic Map	16	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-hydroxypropanoic acid (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-diaminodiphenylmethane (ISO)

all-trans-retinoic acid (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

choline (ISO)

clofibrate (ISO)

cobalt dichloride (ISO)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

decabromodiphenyl ether (EXP)

dexamethasone (ISO)

diarsenic trioxide (ISO)

dibutyl phthalate (EXP,ISO)

dicrotophos (ISO)

diethylstilbestrol (ISO)

enzyme inhibitor (ISO)

folic acid (ISO)

formaldehyde (ISO)

GSK-J4 (ISO)

hexane (EXP)

hypochlorous acid (ISO)

indometacin (ISO)

ketamine (EXP)

ketoconazole (ISO)

L-methionine (ISO)

methoxychlor (EXP)

morphine (EXP)

nitrates (ISO)

oxaliplatin (EXP)

paracetamol (EXP,ISO)

pirinixic acid (ISO)

rac-lactic acid (ISO)

rotenone (EXP)

sodium arsenite (ISO)

temozolomide (ISO)

thioacetamide (EXP)

thiram (ISO)

titanium dioxide (ISO)

topotecan (EXP)

triphenyl phosphate (ISO)

triptonide (ISO)

urethane (ISO)

valproic acid (ISO)

vincristine (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

chromatin organization (IEA)

flagellated sperm motility (ISO)

male germ-line stem cell asymmetric division (ISO)

male meiosis I (ISO)

negative regulation of apoptotic signaling pathway (ISO)

positive regulation of DNA-templated transcription (ISO)

positive regulation of transforming growth factor beta receptor signaling pathway (ISO)

regulation of DNA-templated transcription (ISO)

seminiferous tubule development (ISO)

spermatid development (ISO)

spermatogenesis (ISO)

Cellular Component

CCAAT-binding factor complex (ISO)

nucleoplasm (ISO)

nucleus (IEA,ISO)

plasma membrane (ISO)

Sin3-type complex (ISO)

Molecular Function

DNA binding (ISO)

histone H3K4me3 reader activity (ISO)

metal ion binding (IEA)

phosphatidylinositol binding (ISO)

protein binding (ISO)

protein-containing complex binding (ISO)

zinc ion binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

histone modification pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	Readout of epigenetic modifications.	Patel DJ and Wang Z, Annu Rev Biochem. 2013;82:81-118. doi: 10.1146/annurev-biochem-072711-165700.
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:12477932	PMID:15243141	PMID:16098148	PMID:16387653	PMID:16728974	PMID:16893883	PMID:18334480	PMID:21124965	PMID:25578879

Genomics

Comparative Map Data

Ing2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	51,305,311 - 51,316,177 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	16	51,307,466 - 51,316,177 (+)	Ensembl				GRCr8
mRatBN7.2	16	44,573,592 - 44,584,180 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	44,575,597 - 44,583,482 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	16	49,981,914 - 49,989,799 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	53,342,471 - 53,350,356 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	48,617,653 - 48,625,543 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	47,714,756 - 47,725,836 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	47,717,951 - 47,725,836 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	16	47,434,528 - 47,445,331 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	16	47,785,534 - 47,793,419 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	16	42,587,118 - 42,595,003 (+)	NCBI		Celera
RGSC_v3.1	16	47,786,053 - 47,792,041 (+)	NCBI
Cytogenetic Map	16	q11	NCBI

ING2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	183,505,058 - 183,512,429 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	183,505,058 - 183,512,429 (+)	Ensembl			hg38	GRCh38
GRCh37	4	184,426,211 - 184,433,582 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	184,663,214 - 184,669,243 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	4	184,801,368 - 184,807,399	NCBI
Celera	4	181,759,105 - 181,765,135 (+)	NCBI		Celera
Cytogenetic Map	4	q35.1	NCBI
HuRef	4	180,185,578 - 180,191,607 (+)	NCBI		HuRef
CHM1_1	4	184,402,988 - 184,409,017 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	4	186,847,848 - 186,855,219 (+)	NCBI		T2T-CHM13v2.0

Ing2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	48,120,213 - 48,128,627 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	48,120,213 - 48,128,591 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	8	47,667,178 - 47,675,159 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	47,667,178 - 47,675,556 (-)	Ensembl			mm10	GRCm38
MGSCv37	8	48,752,532 - 48,760,513 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	8	49,165,995 - 49,173,975 (-)	NCBI		MGSCv36	mm8
Celera	8	50,344,830 - 50,352,459 (-)	NCBI		Celera
Cytogenetic Map	8	B1.1	NCBI
cM Map	8	26.87	NCBI

Ing2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	25,325,600 - 25,331,175 (-)	Ensembl
ChiLan1.0	NW_004955403	25,325,600 - 25,331,175 (-)	NCBI	ChiLan1.0	ChiLan1.0

ING2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	181,239,194 - 181,245,250 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	181,604,462 - 181,610,045 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	175,683,040 - 175,689,646 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	187,909,495 - 187,915,674 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	187,909,495 - 187,915,674 (+)	Ensembl			panPan2	panpan1.1

ING2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	16	46,843,478 - 46,850,856 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	16	46,845,289 - 46,850,637 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	16	47,276,641 - 47,283,898 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	16	49,066,364 - 49,073,637 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	16	49,066,364 - 49,073,972 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	16	47,028,723 - 47,035,995 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	16	47,644,436 - 47,651,616 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	47,778,501 - 47,785,754 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Ing2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404943	32,516,686 - 32,523,622 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936554	5,587,548 - 5,593,635 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936554	5,585,953 - 5,593,536 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ING2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	44,918,066 - 44,925,867 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	15	44,917,595 - 44,925,900 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	51,531,019 - 51,537,530 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ING2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	7	129,486,978 - 129,493,740 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	7	129,487,339 - 129,493,596 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666037	109,702,646 - 109,708,819 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ing2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624769	14,257,403 - 14,264,391 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624769	14,257,369 - 14,263,912 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Ing2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	13	40,351,317 - 40,358,215 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Ing2
216 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	734
Count of miRNA genes:	301
Interacting mature miRNAs:	376
Transcripts:	ENSRNOT00000018689
Prediction methods:	Microtar, Miranda
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2300163	Bmd64	Bone mineral density QTL 64	5.3	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	16	44455123	89455123	Rat
70215	Niddm29	Non-insulin dependent diabetes mellitus QTL 29	3.54		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	16	36928782	81928782	Rat
1578768	Stresp22	Stress response QTL 22	2.8		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	16	41992064	86992064	Rat
737826	Alc11	Alcohol consumption QTL 11	3.2		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	16	4234212	66955197	Rat
2302057	Pia29	Pristane induced arthritis QTL 29	3.6	0.001	blood autoantibody amount (VT:0003725)	serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)	16	28468701	73468701	Rat
7205510	Activ5	Activity QTL 5	3.78	0.00028	locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	16	49099196	91442908	Rat
1357403	Slep4	Serum leptin concentration QTL 4	3.91		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	16	32361043	77361043	Rat
737819	Hcas4	Hepatocarcinoma susceptibility QTL 4	4.43		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	16	4234212	53708481	Rat
631833	Sach2	Saccharin preference QTL 2	4	0.01	consumption behavior trait (VT:0002069)	calculated saccharin drink intake rate (CMO:0001613)	16	49757666	56898388	Rat
8694453	Bw172	Body weight QTL 172	8.33	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	16	31058039	76058039	Rat
1298529	Arunc1	Aerobic running capacity QTL 1	4		exercise endurance trait (VT:0002332)	longest distance run on treadmill (CMO:0001406)	16	34398294	79398294	Rat
2312663	Slep9	Serum leptin concentration QTL 9		0.001	blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	16	839086	66195506	Rat
2312660	Bw95	Body weight QTL 95		0.05	inguinal fat pad mass (VT:0010424)	inguinal fat pad weight to body weight ratio (CMO:0001253)	16	839086	66195506	Rat
6903294	Stl30	Serum triglyceride level QTL 30	2.6	0.0013	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	16	31885271	76885271	Rat
2293690	Bss45	Bone structure and strength QTL 45	5.13	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	16	44455123	89455123	Rat
2312666	Insul16	Insulin level QTL 16		0.01	blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	16	839086	66195506	Rat
70205	Gcr3	Gastric cancer resistance QTL 3	2.3		stomach morphology trait (VT:0000470)	stomach tumor diameter (CMO:0001889)	16	17730818	72536785	Rat
2293343	Glom16	Glomerulus QTL 16	7.4		kidney glomerulus integrity trait (VT:0010546)	kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)	16	839086	52786090	Rat
2301406	Kidm39	Kidney mass QTL 39		0.002	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	16	15905802	60905802	Rat
2312669	Stl23	Serum triglyceride level QTL 23		0.01	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	16	839086	66195506	Rat

Markers in Region

RH131506

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	44,581,780 - 44,581,960 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	47,724,135 - 47,724,314	NCBI	Rnor6.0
Rnor_5.0	16	47,443,630 - 47,443,809	UniSTS	Rnor5.0
RGSC_v3.4	16	47,791,718 - 47,791,897	UniSTS	RGSC3.4
Celera	16	42,593,302 - 42,593,481	UniSTS
RH 3.4 Map	7	789.8	UniSTS
Cytogenetic Map	16	q11	UniSTS

BQ195509

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	44,582,611 - 44,582,799 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	47,724,966 - 47,725,153	NCBI	Rnor6.0
Rnor_5.0	16	47,444,461 - 47,444,648	UniSTS	Rnor5.0
RGSC_v3.4	16	47,792,549 - 47,792,736	UniSTS	RGSC3.4
Celera	16	42,594,133 - 42,594,320	UniSTS
RH 3.4 Map	16	439.8	UniSTS
Cytogenetic Map	16	q11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001106083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253131	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253132	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253133	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC168652	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473995	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000018689 ⟹ ENSRNOP00000018689

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	51,307,569 - 51,316,177 (+)	Ensembl
mRatBN7.2 Ensembl	16	44,575,597 - 44,583,482 (+)	Ensembl
Rnor_6.0 Ensembl	16	47,717,951 - 47,725,836 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000166374 ⟹ ENSRNOP00000102164

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	51,307,466 - 51,315,725 (+)	Ensembl

RefSeq Acc Id:

NM_001106083 ⟹ NP_001099553

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	51,308,292 - 51,316,177 (+)	NCBI
mRatBN7.2	16	44,575,597 - 44,583,482 (+)	NCBI
Rnor_6.0	16	47,717,951 - 47,725,836 (+)	NCBI
Rnor_5.0	16	47,434,528 - 47,445,331 (+)	NCBI
RGSC_v3.4	16	47,785,534 - 47,793,419 (+)	RGD
Celera	16	42,587,118 - 42,595,003 (+)	RGD

Sequence:

show sequence

GGGCAAGTCCACTGAGACTCCGACAGGCAAGGAGGCTGATAGCGAGGCGAGAGGATAGCGAGGG
TCTTGTCACGGGGATCCGGGCGACCGGGCAGCTCTGGTGGTGTCTGGGGAGTCCCAGGGGGGAC
AGCCAGTGTCACCGCCCGGGAGCCCGGCGCCGTCGGCCGCGGGGAACCCCGCTGCTCTCTCCCA
GCGAGGGAGGGGGCCGGAGGGAGCCCCGGTCTCGCCCCGCCCTTGGGCTTGTTACCGCGGGGGC
GGGGAGTAAGGGTTTCTTCTGGGGGGAGTGGAGATCGGGGGACTCGGCGGTGCCCTCTCGAGCG
GCGGCCGTGTCCCCGCGGCGCCGGGCTGCCGAGCGGAGGAGCGGCGGTCGTGGCTGTTGCATGT
GTGGCTGCTGGATGCGGAGGCGGCGGCGGCGGCGGCGGCGAGGAGCAGCAGCGGCGGCAGGATG
TTAGGGCAGCAGCAGCAGCTGTACTCGTCGGCCGCGCTCCTGACCGGAGAGCGGAGCCGGCTGC
TCACCTGCTACGTGCAGGACTACCTGGAGTGTGTGGAGTCGCTGCCCCACGACATGCAGAGGAA
CGTGTCGGTGCTGCGGGAGCTGGACAACAAATACCAAGAAACTTTAAAGGAAATTGATGATGTC
TATGAAAAATATAAGAAAGAAGATGATTCAAACCAGAAAAAACGCCTACAGCAGCATCTCCAGA
GAGCATTAATCAATAGCCAAGAATTGGGAGATGAAAAGATTCAGATTGTCACACAGATGCTGGA
ATTGGTGGAAAACCGAGCCAGACAAATGGAGCTGCATTCACAGTGTTTCCAGGATCCTGCTGAA
AGTGAGCGGGCCTCAGACAAATCCAAGATGGATTCCAGTCAACCCGAAAGATCTTCCAGAAGAC
CTCGAAGACAGCGGACCAGTGAGAGCCGTGATTTATGTCACATGACAAACGGGATTGATGACTG
CGATGATCAGCCACCGAAAGAAAAGAAATCCAAATCCGCCAAGAAGAAAAAGCGCTCCAAGGCC
AAGCAGGAGAGGGAAGCGTCACCTGTTGAGTTTGCCATAGATCCCAACGAGCCCACCTACTGCT
TATGTAACCAAGTGTCTTACGGGGAGATGATAGGCTGTGACAATGAACAGTGTCCCATTGAGTG
GTTTCACTTTTCCTGCGTTTCACTCACCTATAAACCAAAGGGGAAATGGTATTGCCCAAAGTGC
AGGGGAGACAGTGAGAAAACCATGGACAAAAGTACTGAAAAGACAAGAAAGGAGAGAAGAGCGA
GGTAGTGAAGGCCATCCGGTTTTAAAGGGTTCTTTGTCTTTTATATAATTGCTTTACTTTCAGA
AAATGTTTTAGGGTAAATGCATAAGACTATGCAATAATTTTTAATCATTAGTATTGATGGTGTA
TTAAAAGTTGTTGTACTTTGTCTGTGACCTTAATTTTCTGCACTGAATTACCAAATATTTTCAG
CCAGATAGTCTTGTGAGGACCCGATGAAAGGAACAGGCAGTTTCCCAAGCCACGCCCATCCCAG
CCCCACCTCGAACTCCCATGCTGGCTGGGGGTGGTAAACCCAAAAGTTTTGCTAACATTTTATT
TTAGTTCTGTATGCTTAAGAATTTCATGTATTGTTGGATTTCTCTGTCAAATTATCTTGGTAAT
TTCGAACATGAACACTATCCTGTTTAGAGATTCTTCCTGCCTCCTTGTTTTCAGATACTTGTTA
AATCTCTAGTGGCCCAGAAATCCCAGAAACAGACAGAGTGATCTGTGCTTCCACACGGGCTAGT
GCGCTCTTACTGGAGTATTTGTTGCTGTATTTCCTGGGTAGCTTTTGATACCTGTCAGTTGTAG
TGTCTGGAAAAGCCCTGCTTCTTTAGAACAGACACACCTCATCTAGTGCTTAATAAGGGACTTG
TTTTGTTTTGATCAGGACATATAAGACTAGTTAGAAATACCAAGAAACAAAACAAACAAACAAA
AAAACAACAACAAAAAACGCTGCCCCTGGCAAGATTTGGATTATTTAGCATCATGGCTCAAGGT
TGAACAATTTAAAGGTGTGTCTTAATATTTTCCATGTGACCCACTGCTGGGATGTTTAGTCACA
GACCTGTCATGGGAAAAGGGCATTTATTAGTCTTTAGATATTGATATTGCCTTTTCTGTTAAAC
AGTTATTTGAAATAGTTTTTCTGGGACCTAGAGTTTATTTCTGTCCAAAGGAGAATTATACATT
AATTTAAATAATCACATATTTACCCTAACCTGGTATTGGTGCTGTTGATGTTTCATGTTTATGG
AATTAACTTCATTATAACGATACCATCAATAATGCATTTGTAAATTGAGTTTTCCAAGATTTTC
ATATTCTAAGGGTAAGCATCTTGGTGGATCTGTGACCATGTATTGGAGCAGTTTTTGGTTATGG
TGGGCAGCAGATGGACTAGTCCTTTAGACTTATATGTAGCATCCGTCCCATTCATCATTTCTTT
CTAATCTGATAATCTTGGTTCTTTTTGATTAACATGTGAAAAAATCCTGTCTGCTTGTTTGGAA
AAGAATTTTTTTTTTTCCTCTTCAAGCTGTCTGTGTGACTTAGCCATGTCATTTCACCTTACCT
GAATGTGAGGTCATCGACCTGGGAAATGAGTTGGTTTAACCATCCCCCAGGGTCTTCAGAAATT
TCAGTGTTGTACTGTTGGTGAAAGATTTTTAACAATGAAATGGCTTGCTT

hide sequence

RefSeq Acc Id:

XM_006253131 ⟹ XP_006253193

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	51,305,311 - 51,314,867 (+)	NCBI
mRatBN7.2	16	44,573,592 - 44,584,180 (+)	NCBI
Rnor_6.0	16	47,714,756 - 47,724,788 (+)	NCBI
Rnor_5.0	16	47,434,528 - 47,445,331 (+)	NCBI

Sequence:

show sequence

GTCCTCTGCAAGAGCAGCAGGCGCTCTGAACCACTGAGCCATATCTATACCCCATCACCTAAGA
TTTTAATAATCCCCTGCAGGTAAAACACAAGAGTTCTACATTAAATATAGTCACATGCTGATAA
CGGTGACCCTGAGCAAATGCTATATATAAGTACACTTTTGTGTTTAGAAGTTTACATCATAAAA
AAATTAAAAAAAAATATATATAGCTGGGCATGGTAGCACATGCCTGTATTCCAGCACTAGGGAG
GCAGACAAGATCTCAAGTCTGAGGCCAACCTGGCCTAGGACACATTTGTAAGTTGCCATGATAA
AGCCCACTACTTTGTATGCTAACCTGAAAAAAAGGCAAAATTCAAAAAGGTTTTAAAACATTCA
GGGCTGGAGAGATGGCTCAAAGGTTAAGAGAACTTAAGGCTCTTGCAGGGGCCCTGTTGGTCCC
CAGCACTCACATGGAGGCTCACAACTGTGTGCAATTCTAGGTCCACAGGATCTGACACCCTTTT
CAATGTACCAACCACAATATCCTTGAGCACCAGGCATGTGCATGGTGCACATGTGCACATGAAA
GAAAATAAATCTTTAAAAAGGAAAAACATGAAATATTAAAAAGAAAAGATTTTCTAATGTAATT
GGCTTAATTCAAGCAGAAACTGATTCTTTTCTCTCAGAAGTCCTAGCTAGTTTGCTTTTAATTA
GTTGAGACTGTTCCTCTCATCTCATATTGTATTAACTATGGATATAAACGTTTTAGTATAAAGG
AAATAGGCTTGGGGACATTTCCCATCAGGGACCTAATAAAAGGCATACACTAGACTTAGTCCAG
TAACTTGAAGCCAATTGCATACTAATTTGGAGGCATCGGCTACTCATCTCTTATCTTTTTCCGG
GTCAGTTTAAGAGCAGAACAAAATACCAAACAACAACCCTGCACCCAACCCCCACTCCCAGAGT
ATCATCAATTTCTATATTGTAGAGAGTGGGGGATTTTTAAGCTCTGCCTTCAGGAGAATTAGGA
GACTGACTGAGTAGCTACTTAGAGGGAAAGGACAATGATAAACAGCTAGGGTCAGGAGTTGGAA
TTGCAAGGACCAAGGCATGCAATGCTCACTTTCCAACCTCCTGTAAACATTCTCCCCACACCGG
CTGCTTTCAGAAGGATGTCAGAATTAGATAAACCTGTGTGAATAAACGCAGCAAGAAATGCACA
CCTGAAATAAGCCATACATATTATCATGTTTGAGGTTCGGAAGGTTTAATACCAGCGCCTGGTG
GAGATACAATGATCTGGACTCCCTCCCCCTTCAGTCTGTCAGAACTATGGGAGGTACCCGATGC
TTTCCCAAACCCTTCCTTGCTTCCCAGCTTGTTTTTTGGTTCTTGGTTAAAACTGCATCACCGA
CTTTCCTCTGTTCCCACACATCAAGTCTGCCTGTAGAGCATTAATAAGCAGGCTGCATAAAATC
CATGGGCCCCAACAGCGCCTAACTCCAATAAGTAAGGAAAGGAGCGGCTTGCAATTATTCCATC
TTTTAGTTAGGATTGGCTGAGCCAAATTTGTGAGTGAACACAAAAATTAATTCAGGTAAAATAA
AACAAGTCAATAACCTTAGCAACGATTATTGTTCAACAAGACCTGGCTTTTTAATATTAAAGTA
TGGCAGCAAGATAATTCGGCCCAAGTTCTCAGAAATTCAATAGTGTGTTTGCCTGGGTTGACCT
AATATTCGACTGGTCAAAATCTCAGCGTTAAAGGATATTAACCCCTGAGTTCCCAGGCCTTACA
AGATAACTCTTGTCCTCGGGACGCCGAATTCCGCGTTGTGTTTTACGAATCCAAATTTTCACTT
AGACCCGGACCTAGATTTCCCTTGGCAAACACCTGCTTTGCATATAGCACTTCGCAAGTGTTCG
GAACAGGCCGTGCAACAGGTACAGCGCTGCAAACCAGGCAAGAGCACCCCAAACTCATCTCTCT
GGCCTTTTCTTACTCAGAGACTCTGCTCCCATGGGGGTTTACACAAGCGTTGCATCAAAATTCG
GTGAGTACTCTTACTTATACCTATTTCTGGGGAAACAAAAACAAAAACCAAACAGCTCACATAT
TTATATACATTCCGGAAGTCTATCCGTAATTACAGTTAGCTCCTCCTCCTGGCATTTCACTGAT
GGTACTGGGAGAGTAAGGCGGCTAACCAACCGCTCACACAGACAGCACCGCACTCGGTGGCTGA
TCCGATTTTTAATCCCATCTGCACGGCTCCCCTGCTGGTTAGTGGTGAAGCCGAGTGAAAATAC
AGTGCCGCGCGCGTGTGTGTAGTGAAAAATACAGTGTCGTCTGTGTGTATGTGTGCGTCTCTCA
TTCTGCGGCCACGCCAAGTCCTCCCTGGTGTGTGATGCCTAAGCGATTCGACCTATGGAAACAG
TGTCCTTAAGGTGGTTTGGGGTCGGGGGACAGGGCGGGGCGCAGTCTTGTCACCTTCTCCCTAA
ACCAAACTCTAAGGCGCGCGGGGAGGGGAGCCGACCCTGCGAGCCACCCTGGAGCTGGGGGGAG
GGGACCGCATGCGAGGCGGGAATCGGCATTTAAAAACCGAGGGCAGGGGGCGCACCGCCTACCT
CCGCGGTCGGCCCCGGTACTCCGGGAGCCTGGCGGCGACCGGAGCACAACCGTGGCCGCGGGGC
GCTCGGCGGGAAGTCGCCGCGCATGCCCGGAGCCGCGCCCGCTGCACCCTGGGTCGCTTTAGTT
CTCTCAGGCCTCACTCGGCCAGCAGCGCCCAGGGGCCGCTCGCTGCTGTCTTGGAGGCTCGCGA
GGGAGGCGCTGGATCCGCCAGATGGAGGCAAGAAACTTTAAAGGAAATTGATGATGTCTATGAA
AAATATAAGAAAGAAGATGATTCAAACCAGAAAAAACGCCTACAGCAGCATCTCCAGAGAGCAT
TAATCAATAGCCAAGAATTGGGAGATGAAAAGATTCAGATTGTCACACAGATGCTGGAATTGGT
GGAAAACCGAGCCAGACAAATGGAGCTGCATTCACAGTGTTTCCAGGATCCTGCTGAAAGTGAG
CGGGCCTCAGACAAATCCAAGATGGATTCCAGTCAACCCGAAAGATCTTCCAGAAGACCTCGAA
GACAGCGGACCAGTGAGAGCCGTGATTTATGTCACATGACAAACGGGATTGATGACTGCGATGA
TCAGCCACCGAAAGAAAAGAAATCCAAATCCGCCAAGAAGAAAAAGCGCTCCAAGGCCAAGCAG
GAGAGGGAAGCGTCACCTGTTGAGTTTGCCATAGATCCCAACGAGCCCACCTACTGCTTATGTA
ACCAAGTGTCTTACGGGGAGATGATAGGCTGTGACAATGAACAGTGTCCCATTGAGTGGTTTCA
CTTTTCCTGCGTTTCACTCACCTATAAACCAAAGGGGAAATGGTATTGCCCAAAGTGCAGGGGA
GACAGTGAGAAAACCATGGACAAAAGTACTGAAAAGACAAGAAAGGAGAGAAGAGCGAGGTAGT
GAAGGCCATCCGGTTTTAAAGGGTTCTTTGTCTTTTATATAATTGCTTTACTTTCAGAAAATGT
TTTAGGGTAAATGCATAAGACTATGCAATAATTTTTAATCATTAGTATTGATGGTGTATTAAAA
GTTGTTGTACTTTGTCTGTGACCTTAATTTTCTGCACTGAATTACCAAATATTTTCAGCCAGAT
AGTCTTGTGAGGACCCGATGAAAGGAACAGGCAGTTTCCCAAGCCACGCCCATCCCAGCCCCAC
CTCGAACTCCCATGCTGGCTGGGGGTGGTAAACCCAAAAGTTTTGCTAACATTTTATTTTAGTT
CTGTATGCTTAAGAATTTCATGTATTGTTGGATTTCTCTGTCAAATTATCTTGGTAATTTCGAA
CATGAACACTATCCTGTTTA

hide sequence

RefSeq Acc Id:

XM_006253132 ⟹ XP_006253194

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	51,309,036 - 51,314,867 (+)	NCBI
mRatBN7.2	16	44,576,352 - 44,584,180 (+)	NCBI
Rnor_6.0	16	47,719,215 - 47,724,788 (+)	NCBI
Rnor_5.0	16	47,434,528 - 47,445,331 (+)	NCBI

Sequence:

show sequence

CCCAGCCTAGGGGCGGGGCCTGCAGGTGTGACGTCGTATGGGCGGGGCGCGCGCTCCCGCGGGC
GTCGGCCACAGCGGGCTGCTCCTAGGGGCCGGGTGAACTGAACTGACTGCGGGCGGGACAGTAG
AAGGGCCTGGGCGGAGTTAGCGTTGGGTGGTGATGTTTCAAATCTGTCCTACCCCGAGAGTGAA
TCAAGGCGCGGGCACTGCCGTGGGACTGTCTCTGACCCTGGCTTAGCGTAGGTTCCGGGCTATG
TGTCACTTCCGGACTTCTGGAGGAAGTGGGTTCGTTGGCTGGGCAACCACCTGGCGTCCTTGCA
CCCTTGGGTTCCTCCTCCACCAAGTTTAAATGAGGAGAAAAGCTTTTTTGTGTTGTTAGCAAAG
AAACTAGGGCAGGGAATTATCTTTAGGGACTATCATACCTTTAGGTCCTTTAGGGACTGCTAGG
ACAGGAGATATTTAAATGGGGATATGTTCAGGCTTTAGTAACTCCTAGTCAGGAAACTGTAGAG
ATCTAATATGGACCATAAAAACAACATGGAACCATTCTGTTCTCCCGGACCATCACCAGTCCTG
TAACTTAATCCTGTAATACAGCCCATGATGACTTAGCACGTTAGAGCACTTAGTTGTTTCAATC
TACAAACTTGTTTTCTGAGTCTCTGATAAGATTGTTTATAGAACGTCAGTGTTTTCACCAGATT
CAAAATTTATGAGTCATGTAACATAAAGCAGTGGTGAGGGATGCATAGTAATACCGTGGGAAGC
TAAAACAATGGGGCACCGACGGAGCGTTGAAATCCAGAGCTGCTGTGTATTTGTTACCCCCAGG
AAGACAGACCTCCTTCATGTAGCATTGTTGGAAACTTTAAAGGAAATTGATGATGTCTATGAAA
AATATAAGAAAGAAGATGATTCAAACCAGAAAAAACGCCTACAGCAGCATCTCCAGAGAGCATT
AATCAATAGCCAAGAATTGGGAGATGAAAAGATTCAGATTGTCACACAGATGCTGGAATTGGTG
GAAAACCGAGCCAGACAAATGGAGCTGCATTCACAGTGTTTCCAGGATCCTGCTGAAAGTGAGC
GGGCCTCAGACAAATCCAAGATGGATTCCAGTCAACCCGAAAGATCTTCCAGAAGACCTCGAAG
ACAGCGGACCAGTGAGAGCCGTGATTTATGTCACATGACAAACGGGATTGATGACTGCGATGAT
CAGCCACCGAAAGAAAAGAAATCCAAATCCGCCAAGAAGAAAAAGCGCTCCAAGGCCAAGCAGG
AGAGGGAAGCGTCACCTGTTGAGTTTGCCATAGATCCCAACGAGCCCACCTACTGCTTATGTAA
CCAAGTGTCTTACGGGGAGATGATAGGCTGTGACAATGAACAGTGTCCCATTGAGTGGTTTCAC
TTTTCCTGCGTTTCACTCACCTATAAACCAAAGGGGAAATGGTATTGCCCAAAGTGCAGGGGAG
ACAGTGAGAAAACCATGGACAAAAGTACTGAAAAGACAAGAAAGGAGAGAAGAGCGAGGTAGTG
AAGGCCATCCGGTTTTAAAGGGTTCTTTGTCTTTTATATAATTGCTTTACTTTCAGAAAATGTT
TTAGGGTAAATGCATAAGACTATGCAATAATTTTTAATCATTAGTATTGATGGTGTATTAAAAG
TTGTTGTACTTTGTCTGTGACCTTAATTTTCTGCACTGAATTACCAAATATTTTCAGCCAGATA
GTCTTGTGAGGACCCGATGAAAGGAACAGGCAGTTTCCCAAGCCACGCCCATCCCAGCCCCACC
TCGAACTCCCATGCTGGCTGGGGGTGGTAAACCCAAAAGTTTTGCTAACATTTTATTTTAGTTC
TGTATGCTTAAGAATTTCATGTATTGTTGGATTTCTCTGTCAAATTATCTTGGTAATTTCGAAC
ATGAACACTATCCTGTTTA

hide sequence

RefSeq Acc Id:

XM_006253133 ⟹ XP_006253195

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	51,308,766 - 51,314,867 (+)	NCBI
mRatBN7.2	16	44,576,075 - 44,584,180 (+)	NCBI
Rnor_6.0	16	47,718,484 - 47,724,788 (+)	NCBI
Rnor_5.0	16	47,434,528 - 47,445,331 (+)	NCBI

Sequence:

show sequence

ACCTGGAGTGTGTGGAGTCGCTGCCCCACGACATGCAGAGGAACGTGTCGGTGCTGCGGGAGCT
GGACAACAAATACCAAGTCATGTAACATAAAGCAGTGGTGAGGGATGCATAGTAATACCGTGGG
AAGCTAAAACAATGGGGCACCGACGGAGCGTTGAAATCCAGAGCTGCTGTGTATTTGTTACCCC
CAGGAAGACAGACCTCCTTCATGTAGCATTGTTGGAAACTTTAAAGGAAATTGATGATGTCTAT
GAAAAATATAAGAAAGAAGATGATTCAAACCAGAAAAAACGCCTACAGCAGCATCTCCAGAGAG
CATTAATCAATAGCCAAGAATTGGGAGATGAAAAGATTCAGATTGTCACACAGATGCTGGAATT
GGTGGAAAACCGAGCCAGACAAATGGAGCTGCATTCACAGTGTTTCCAGGATCCTGCTGAAAGT
GAGCGGGCCTCAGACAAATCCAAGATGGATTCCAGTCAACCCGAAAGATCTTCCAGAAGACCTC
GAAGACAGCGGACCAGTGAGAGCCGTGATTTATGTCACATGACAAACGGGATTGATGACTGCGA
TGATCAGCCACCGAAAGAAAAGAAATCCAAATCCGCCAAGAAGAAAAAGCGCTCCAAGGCCAAG
CAGGAGAGGGAAGCGTCACCTGTTGAGTTTGCCATAGATCCCAACGAGCCCACCTACTGCTTAT
GTAACCAAGTGTCTTACGGGGAGATGATAGGCTGTGACAATGAACAGTGTCCCATTGAGTGGTT
TCACTTTTCCTGCGTTTCACTCACCTATAAACCAAAGGGGAAATGGTATTGCCCAAAGTGCAGG
GGAGACAGTGAGAAAACCATGGACAAAAGTACTGAAAAGACAAGAAAGGAGAGAAGAGCGAGGT
AGTGAAGGCCATCCGGTTTTAAAGGGTTCTTTGTCTTTTATATAATTGCTTTACTTTCAGAAAA
TGTTTTAGGGTAAATGCATAAGACTATGCAATAATTTTTAATCATTAGTATTGATGGTGTATTA
AAAGTTGTTGTACTTTGTCTGTGACCTTAATTTTCTGCACTGAATTACCAAATATTTTCAGCCA
GATAGTCTTGTGAGGACCCGATGAAAGGAACAGGCAGTTTCCCAAGCCACGCCCATCCCAGCCC
CACCTCGAACTCCCATGCTGGCTGGGGGTGGTAAACCCAAAAGTTTTGCTAACATTTTATTTTA
GTTCTGTATGCTTAAGAATTTCATGTATTGTTGGATTTCTCTGTCAAATTATCTTGGTAATTTC
GAACATGAACACTATCCTGTTTA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001099553	(Get FASTA)	NCBI Sequence Viewer
	XP_006253193	(Get FASTA)	NCBI Sequence Viewer
	XP_006253194	(Get FASTA)	NCBI Sequence Viewer
	XP_006253195	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI68652	(Get FASTA)	NCBI Sequence Viewer
	EDL78911	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000018689.5
	ENSRNOP00000102164
	ENSRNOP00000102164.1

RefSeq Acc Id:

NP_001099553 ⟸ NM_001106083

- UniProtKB:

B5DEF8 (UniProtKB/TrEMBL), A6JPL0 (UniProtKB/TrEMBL), F7F129 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLGQQQQLYSSAALLTGERSRLLTCYVQDYLECVESLPHDMQRNVSVLRELDNKYQETLKEIDD
VYEKYKKEDDSNQKKRLQQHLQRALINSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPA
ESERASDKSKMDSSQPERSSRRPRRQRTSESRDLCHMTNGIDDCDDQPPKEKKSKSAKKKKRSK
AKQEREASPVEFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPK
CRGDSEKTMDKSTEKTRKERRAR

hide sequence

RefSeq Acc Id:

XP_006253193 ⟸ XM_006253131

- Peptide Label:

isoform X1

- Sequence:

show sequence

MRGGNRHLKTEGRGRTAYLRGRPRYSGSLAATGAQPWPRGARREVAAHARSRARCTLGRFSSLR
PHSASSAQGPLAAVLEAREGGAGSARWRQETLKEIDDVYEKYKKEDDSNQKKRLQQHLQRALIN
SQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERASDKSKMDSSQPERSSRRPRRQR
TSESRDLCHMTNGIDDCDDQPPKEKKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYCLCNQV
SYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRGDSEKTMDKSTEKTRKERRAR

hide sequence

RefSeq Acc Id:

XP_006253195 ⟸ XM_006253133

- Peptide Label:

isoform X2

- Sequence:

show sequence

MGHRRSVEIQSCCVFVTPRKTDLLHVALLETLKEIDDVYEKYKKEDDSNQKKRLQQHLQRALIN
SQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERASDKSKMDSSQPERSSRRPRRQR
TSESRDLCHMTNGIDDCDDQPPKEKKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYCLCNQV
SYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRGDSEKTMDKSTEKTRKERRAR

hide sequence

RefSeq Acc Id:

XP_006253194 ⟸ XM_006253132

- Peptide Label:

isoform X2

- Sequence:

show sequence

MGHRRSVEIQSCCVFVTPRKTDLLHVALLETLKEIDDVYEKYKKEDDSNQKKRLQQHLQRALIN
SQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERASDKSKMDSSQPERSSRRPRRQR
TSESRDLCHMTNGIDDCDDQPPKEKKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYCLCNQV
SYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRGDSEKTMDKSTEKTRKERRAR

hide sequence

Ensembl Acc Id:

ENSRNOP00000018689 ⟸ ENSRNOT00000018689

Ensembl Acc Id:

ENSRNOP00000102164 ⟸ ENSRNOT00000166374

Protein Domains

PHD-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B5DEF8-F1-model_v2	AlphaFold	B5DEF8	1-279	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13700089

Promoter ID:

EPDNEW_R10613

Type:

multiple initiation site

Name:

Ing2_1

Description:

inhibitor of growth family, member 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_R10614

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	16	47,717,955 - 47,718,015	EPDNEW

RGD ID:

13700090

Promoter ID:

EPDNEW_R10614

Type:

multiple initiation site

Name:

Ing2_2

Description:

inhibitor of growth family, member 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_R10613

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	16	47,718,245 - 47,718,305	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307347	AgrOrtholog
BioCyc Gene	G2FUF-11410	BioCyc
Ensembl Genes	ENSRNOG00000013480	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000018689.7	UniProtKB/TrEMBL
	ENSRNOT00000166374	ENTREZGENE
	ENSRNOT00000166374.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.40.10	UniProtKB/TrEMBL
	6.10.140.1740	UniProtKB/TrEMBL
InterPro	ING2_PHD	UniProtKB/TrEMBL
	ING_fam	UniProtKB/TrEMBL
	ING_N	UniProtKB/TrEMBL
	Zinc_finger_PHD-type_CS	UniProtKB/TrEMBL
	Znf_FYVE_PHD	UniProtKB/TrEMBL
	Znf_PHD	UniProtKB/TrEMBL
	Znf_PHD-finger	UniProtKB/TrEMBL
	Znf_RING/FYVE/PHD	UniProtKB/TrEMBL
KEGG Report	rno:290744	UniProtKB/TrEMBL
NCBI Gene	290744	ENTREZGENE
PANTHER	PTHR10333	UniProtKB/TrEMBL
	PTHR10333:SF37	UniProtKB/TrEMBL
Pfam	ING	UniProtKB/TrEMBL
PhenoGen	Ing2	PhenoGen
PROSITE	ZF_PHD_1	UniProtKB/TrEMBL
	ZF_PHD_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000013480	RatGTEx
SMART	ING	UniProtKB/TrEMBL
	PHD	UniProtKB/TrEMBL
Superfamily-SCOP	FYVE_PHD_ZnF	UniProtKB/TrEMBL
UniProt	A0ABK0LJX1_RAT	UniProtKB/TrEMBL
	A0ABZ3NNN7_RAT	UniProtKB/TrEMBL
	A6JPL0	ENTREZGENE, UniProtKB/TrEMBL
	B5DEF8	ENTREZGENE
	F7F129	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	B5DEF8	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-04	Ing2	inhibitor of growth family, member 2	Ing1l_predicted	inhibitor of growth family, member 1-like (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-12	Ing1l_predicted	inhibitor of growth family, member 1-like (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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RGD Manual Annotations