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Gene: L3mbtl1 (L3MBTL histone methyl-lysine binding protein 1) Rattus norvegicus

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Symbol:

L3mbtl1

Name:

L3MBTL histone methyl-lysine binding protein 1

RGD ID:

1307316

Description:

Predicted to enable several functions, including SAM domain binding activity; histone binding activity; and histone reader activity. Predicted to be involved in several processes, including negative regulation of macromolecule biosynthetic process; regulation of megakaryocyte differentiation; and regulation of mitotic nuclear division. Predicted to be located in chromatin; condensed chromosome; and nucleoplasm. Predicted to be part of chromatin lock complex. Predicted to be active in nucleus. Orthologous to human L3MBTL1 (L3MBTL histone methyl-lysine binding protein 1); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; INTERACTS WITH atrazine; bisphenol A; lead diacetate.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

H-l(3)mbt protein; L(3)mbt protein homolog; l(3)mbt-like (Drosophila); l(3)mbt-like 1; l(3)mbt-like 1 (Drosophila); L3mbtl; L3MBTL1, histone methyl-lysine binding protein; lethal(3)malignant brain tumor-like protein; lethal(3)malignant brain tumor-like protein 1; LOC311613; RGD1307316; similar to KIAA0681 protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	172,014,774 - 172,053,181 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	172,021,416 - 172,053,181 (+)	Ensembl				GRCr8
mRatBN7.2	3	151,597,903 - 151,633,657 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	151,602,980 - 151,631,233 (+)	Ensembl				mRatBN7.2
Rnor_6.0	3	159,316,580 - 159,348,914 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	159,321,310 - 159,347,631 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	165,513,621 - 165,545,362 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	153,811,334 - 153,836,990 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	150,258,873 - 150,290,717 (+)	NCBI		Celera
RGSC_v3.1	3	153,713,787 - 153,743,026 (+)	NCBI
Cytogenetic Map	3	q42	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

breast cancer (ISO)

genetic disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2-palmitoylglycerol (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

amiodarone (ISO)

atrazine (EXP)

avobenzone (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

CGP 52608 (ISO)

cisplatin (ISO)

clothianidin (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

Dibutyl phosphate (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

entinostat (ISO)

epoxiconazole (ISO)

formaldehyde (ISO)

fulvestrant (ISO)

GSK-J4 (ISO)

indometacin (ISO)

lead diacetate (EXP)

methamphetamine (EXP)

methylmercury chloride (ISO)

nickel atom (ISO)

okadaic acid (ISO)

paracetamol (ISO)

raloxifene (ISO)

SB 431542 (ISO)

SCH 23390 (EXP)

serpentine asbestos (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

tamoxifen (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

chromatin organization (IEA,ISO)

constitutive heterochromatin formation (ISO)

hemopoiesis (ISO)

heterochromatin formation (ISO)

negative regulation of DNA-templated transcription (IBA,ISO)

regulation of DNA-templated transcription (IEA)

regulation of megakaryocyte differentiation (ISO)

regulation of mitotic nuclear division (ISO)

regulation of transcription by RNA polymerase II (IEA)

regulation of ubiquitin-dependent protein catabolic process (IEA)

Cellular Component

chromatin (ISO)

chromatin lock complex (ISO)

condensed chromosome (ISO)

nuclear body (IEA,ISO)

nucleolus (ISO)

nucleoplasm (IEA,ISO)

nucleus (IBA,IEA,ISO)

Molecular Function

chromatin binding (IBA,ISO)

DNA-binding transcription factor activity, RNA polymerase II-specific (IEA)

histone binding (IBA,ISO)

histone H1 reader activity (ISO)

histone H1K26me1 reader activity (ISO)

histone H1K26me2 reader activity (ISO)

histone H4K20me2 reader activity (ISO,ISS)

identical protein binding (ISO)

metal ion binding (IEA)

nucleosome binding (ISO)

protein binding (ISO)

RNA polymerase II transcription regulatory region sequence-specific DNA binding (IEA)

SAM domain binding (ISO)

zinc ion binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

ataxia telangiectasia-mutated (ATM) signaling pathway (ISO)

histone modification pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Double-strand break repair: 53BP1 comes into focus.	Panier S and Boulton SJ, Nat Rev Mol Cell Biol. 2014 Jan;15(1):7-18. doi: 10.1038/nrm3719. Epub 2013 Dec 11.
3.	Push back to respond better: regulatory inhibition of the DNA double-strand break response.	Panier S and Durocher D, Nat Rev Mol Cell Biol. 2013 Oct;14(10):661-72. doi: 10.1038/nrm3659. Epub 2013 Sep 4.
4.	Readout of epigenetic modifications.	Patel DJ and Wang Z, Annu Rev Biochem. 2013;82:81-118. doi: 10.1146/annurev-biochem-072711-165700.
5.	GOA pipeline	RGD automated data pipeline
6.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
8.	Comprehensive gene review and curation	RGD comprehensive gene curation
9.	Physical activity and breast cancer survival: an epigenetic link through reduced methylation of a tumor suppressor gene L3MBTL1.	Zeng H, etal., Breast Cancer Res Treat. 2012 May;133(1):127-35. doi: 10.1007/s10549-011-1716-7. Epub 2011 Aug 12.

Additional References at PubMed

PMID:10445843	PMID:12588862	PMID:15334543	PMID:17540172	PMID:18408754	PMID:18474616	PMID:19144645	PMID:20622853	PMID:22120668

Genomics

Comparative Map Data

L3mbtl1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	172,014,774 - 172,053,181 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	172,021,416 - 172,053,181 (+)	Ensembl				GRCr8
mRatBN7.2	3	151,597,903 - 151,633,657 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	151,602,980 - 151,631,233 (+)	Ensembl				mRatBN7.2
Rnor_6.0	3	159,316,580 - 159,348,914 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	159,321,310 - 159,347,631 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	165,513,621 - 165,545,362 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	153,811,334 - 153,836,990 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	150,258,873 - 150,290,717 (+)	NCBI		Celera
RGSC_v3.1	3	153,713,787 - 153,743,026 (+)	NCBI
Cytogenetic Map	3	q42	NCBI

L3MBTL1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	43,507,697 - 43,550,954 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	43,489,442 - 43,550,954 (+)	Ensembl			hg38	GRCh38
GRCh37	20	42,136,337 - 42,179,594 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	41,576,467 - 41,603,949 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	20	41,576,487 - 41,603,242	NCBI
Celera	20	38,850,523 - 38,878,002 (+)	NCBI		Celera
Cytogenetic Map	20	q13.12	NCBI
HuRef	20	38,872,453 - 38,906,163 (+)	NCBI		HuRef
CHM1_1	20	42,040,166 - 42,074,338 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	20	45,240,962 - 45,284,158 (+)	NCBI		T2T-CHM13v2.0

L3mbtl1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	162,784,260 - 162,819,726 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	162,785,392 - 162,816,442 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	162,942,333 - 162,977,806 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	162,943,472 - 162,974,522 (+)	Ensembl			mm10	GRCm38
MGSCv37	2	162,769,201 - 162,800,258 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	162,634,906 - 162,665,963 (+)	NCBI		MGSCv36	mm8
Celera	2	168,890,449 - 168,921,538 (+)	NCBI		Celera
Cytogenetic Map	2	H2	NCBI
cM Map	2	83.88	NCBI

L3mbtl1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955445	13,621,791 - 13,645,799 (-)	Ensembl
ChiLan1.0	NW_004955445	13,621,007 - 13,645,809 (-)	NCBI	ChiLan1.0	ChiLan1.0

L3MBTL1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	21	49,247,805 - 49,291,112 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	20	49,240,906 - 49,284,213 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	39,846,011 - 39,889,267 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	40,947,112 - 40,984,160 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	40,946,487 - 40,974,309 (+)	Ensembl			panPan2	panpan1.1

L3MBTL1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	31,238,787 - 31,266,062 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	31,217,184 - 31,265,291 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	30,877,015 - 30,909,735 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	31,941,094 - 31,973,823 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	31,940,208 - 31,973,827 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	31,204,815 - 31,237,493 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	31,316,163 - 31,348,842 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	31,856,564 - 31,889,296 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

L3mbtl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	180,236,745 - 180,267,353 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936530	3,038,847 - 3,069,494 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936530	3,038,873 - 3,069,724 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

L3MBTL1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	46,136,013 - 46,173,944 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	17	46,135,567 - 46,176,967 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	51,529,650 - 51,562,094 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

L3MBTL1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	20,253,598 - 20,299,022 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666050	68,995,758 - 69,041,527 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

L3mbtl1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624790	10,761,632 - 10,791,891 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624790	10,762,340 - 10,799,228 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

L3mbtl1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	5	155,007,706 - 155,034,100 (-)	NCBI		Rrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	121
Count of miRNA genes:	89
Interacting mature miRNAs:	101
Transcripts:	ENSRNOT00000045677, ENSRNOT00000063906
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2301411	Bp320	Blood pressure QTL 320		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	141555229	186555229	Rat
12879876	Bw182	Body weight QTL 182		0.003	body mass (VT:0001259)	body weight (CMO:0000012)	3	141555229	186555229	Rat
1582233	Insul10	Insulin level QTL 10	5.4	0.0015	blood insulin amount (VT:0001560)	serum insulin level times blood glucose level (CMO:0002040)	3	133259579	178259579	Rat
1300113	Bp176	Blood pressure QTL 176	3.9		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	166376089	177728348	Rat
12879872	Cm97	Cardiac mass QTL 97		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	141555229	186555229	Rat
1578653	Vnigr3	Vascular neointimal growth QTL 3	3.1		artery morphology trait (VT:0002191)	artery neointimal hyperplastic lesion area (CMO:0001414)	3	151075912	189428310	Rat
12879873	Cm96	Cardiac mass QTL 96		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	3	141555229	186555229	Rat
2302373	Gluco39	Glucose level QTL 39	5.01		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	3	129154923	182114333	Rat
12879874	Cm98	Cardiac mass QTL 98		0.005	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	3	141555229	186555229	Rat
1298068	Bp167	Blood pressure QTL 167		0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	161492708	189428310	Rat
12879875	Kidm64	Kidney mass QTL 64		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	141555229	186555229	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	51581665	184004958	Rat
8552791	Vie2	Viral induced encephalitis QTL 2	4.1		brain integrity trait (VT:0010579)	encephalitis incidence/prevalence measurement (CMO:0002361)	3	166376089	189428310	Rat
61335	Bp20	Blood pressure QTL 20	3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	161799493	176036425	Rat
1331726	Bp208	Blood pressure QTL 208	3.129		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	161799270	187311134	Rat
1578754	Stresp16	Stress response QTL 16	4	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	3	133134628	178134628	Rat
1582213	Insul6	Insulin level QTL 6	3.7	0.0009	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	3	155759447	189428310	Rat
1598854	Memor10	Memory QTL 10	2		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	3	166376089	189428310	Rat
9589106	Insul23	Insulin level QTL 23	13.86	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	3	152055202	189428310	Rat
10755461	Coatc16	Coat color QTL 16			coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	3	142898802	187898802	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	79649560	177741895	Rat
1559282	Emca5	Estrogen-induced mammary cancer QTL 5	3.9		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	3	145335553	189428310	Rat
1582256	Insul9	Insulin level QTL 9	4.4	0.0016	blood insulin amount (VT:0001560)	absolute change in serum insulin level (CMO:0002038)	3	155759447	189428310	Rat
1576306	Schws3	Schwannoma susceptibility QTL 3		0.001	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	3	139299381	184299381	Rat
1300159	Kidm4	Kidney mass QTL 4	3.83		kidney mass (VT:0002707)	right kidney wet weight to body weight ratio (CMO:0001953)	3	141508991	177728348	Rat
631673	Iddm13	Insulin dependent diabetes mellitus QTL 13	1.3	0.663	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	3	137114333	182114333	Rat
1582248	Insul7	Insulin level QTL 7	3.9	0.0041	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	3	155759447	189428310	Rat
2301971	Cm71	Cardiac mass QTL 71	4.63		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	3	131036586	176036586	Rat
2301970	Bw81	Body weight QTL 81	5.19		body mass (VT:0001259)	body weight (CMO:0000012)	3	131036586	176036586	Rat
1578666	Vnigr1	Vascular neointimal growth QTL 1	4.6		artery morphology trait (VT:0002191)	artery lumen area (CMO:0001409)	3	151075912	189428310	Rat
1578656	Vnigr2	Vascular neointimal growth QTL 2	4.2		artery morphology trait (VT:0002191)	lesioned artery residual lumen area (CMO:0001417)	3	151075912	189428310	Rat
12879871	Am7	Aortic mass QTL 7		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	3	141555229	186555229	Rat
631541	Bp81	Blood pressure QTL 81	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	144575244	189428310	Rat

Markers in Region

AU049239

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	3	172,028,450 - 172,028,700 (+)	Marker Load Pipeline
mRatBN7.2	3	151,608,921 - 151,609,170 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	159,325,333 - 159,325,581	NCBI	Rnor6.0
Rnor_5.0	3	165,521,773 - 165,522,021	UniSTS	Rnor5.0
RGSC_v3.4	3	153,814,687 - 153,814,935	UniSTS	RGSC3.4
Celera	3	150,267,125 - 150,267,373	UniSTS
Cytogenetic Map	3	q42	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
14	11	63	162	83	82	51	77	51	6	324	173	11	141	79	91	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001419616	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006224736	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592280	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592281	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592282	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602677	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602678	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602679	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602680	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602681	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039106720	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039106721	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039106722	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_230849	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000045677 ⟹ ENSRNOP00000049326

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	172,021,416 - 172,053,181 (+)	Ensembl
mRatBN7.2 Ensembl	3	151,602,980 - 151,631,233 (+)	Ensembl
Rnor_6.0 Ensembl	3	159,321,310 - 159,347,631 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000063906 ⟹ ENSRNOP00000059126

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	3	159,321,328 - 159,340,332 (+)	Ensembl

RefSeq Acc Id:

NM_001419616 ⟹ NP_001406545

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	172,021,416 - 172,053,181 (+)	NCBI
mRatBN7.2	3	151,601,883 - 151,633,657 (+)	NCBI

RefSeq Acc Id:

XM_017592280 ⟹ XP_017447769

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	172,014,774 - 172,053,181 (+)	NCBI
mRatBN7.2	3	151,597,903 - 151,633,657 (+)	NCBI
Rnor_6.0	3	159,316,580 - 159,348,914 (+)	NCBI

Sequence:

show sequence

TGTGTGTGTGTGTGTGTGTGAGTGAAGAGGCTTCTGTGGATATGGTTATCCCCATCCTTTTCTG
ACTAATCTTGTTCCTAAAAATACAAAATGTGATTAAAACTGTGGAGGCAAGGCAGAACACGTGT
AAAGAGTAGTTAAGATCTATATAAATTTAAACTGTTGATCACAGCAGTTGGGAGAATACCATTT
AAATAAGAACTATCTTTCATCTGGACTAAATCTAAAGATTTGGCTGATGGCTAGCTACTACATA
AGCCAAGTAAACCTGTTTTCTTTTCTGCGAAATAAAGGAGTAAAATTAAAAATGAGTGTATAAG
AGGGAACTGGGGCGACTGAAGAGTTGACCTCTTTCACATGGGTTAGTCAATCAGAAGACACGAG
TACCCACTCTGCTAGTACTGCGGATACTAAGAACCAGTGGGTTTCTTCCTAGAGTGTGGGGTCT
CTTTAACTCCTGAGTTACTCAAGTCTCCTATGATACAGGCGTGGTGTTAGAATAAGAACCAATA
AAAATAGCGGTCTGGTAGAGACAGATCAATTAAAAAAAAGTGGAAGGCACAAGAGCAATGATTT
GCTCAAATCAACACAAAAGGAACCATTCTCGAACTCTAGAATGCAGCATGATAGTCTTCCAATG
TTCAGTGGAAGCGCAGGAGGTACAGTGATGTTCCCAGGGAACATGGTCAACCAGTGGCAGTGGA
TCATCCAAAGGCTGCTATGGCTGGGGTCCTCGATGCCAAGCAAGCTCAAGGCGTCCCTACTATG
GTTGTGCGTGCTCTTCACCCATTCTATGAGTTCCCTGAAACTCCTAAAGTCCCCTCCAAATGTG
GAACCCGACTTAGGCAAGGTTGCAGCCTTGCTGGATAAGACGGCCTGGAAGGAATCCAACAGGC
TAACTGCTTCTGGCTCTGTGGTTCCCAGGATGCTATAAAAACCTCCACCCACTTCTCCAGCGCA
GCTAGCGGGTCTCACAGGGGAGAGACAATTAAGCCTGCACCCCCAAGGCTCCGACGGAAAGCAA
AAGCTGTAACCTAGGGCCATGGCCATGCAGACCCGCCAGCTAAGGAGCTCTGAGCCCCCTCTGC
AGGGTACAGGCCCGCCCCCTGTGTGCGCAGGCGCGCGCCGCACCAGGCTCCCACGGTCGCTCGG
TGCGGGCGGCAACCGCCAGCCTTGCAGACGCAACCAGATGGAGGGGCACAGTGACATGGAAATA
ATAAGGGCAGTGAAAGGGTCTGCCACGGGGGAGATCAACGTACACCTGGTGGCCAGAGACAGCG
CGGGTTCCCACCCTCACCTGCCTACAACCACCTTCATCATTCCTACCAATGCAGCTACCCTTGG
TCTGCCTAGCACTGCCCTGGATGTGTCCTACCCCCGGGAGCCAGTCCACGTGGGCGCAGCGGAG
CGAGTGGCTGGCAGCGAACCCGTCACAGCCACCATTCTGCCACAGCTGAGCACCGGACCAGGGA
CCAATAGCACAGTCAGGCTTCTGGACTGGACAGGGGTTTCTGCACCTTTAGCTGGGAGCGGCAT
GAGGCCCTCAGAACTTGGTCCTGCATCCCAGTTCCGGATAAACGAGTACGCGACACAGAACATG
ATCGAAATAGAGCGGCCACGAAGCCCAGAGCAGCGACATGAGGGTGGCACGGCTGGAAGAGAAG
CAGACATCCAGCACCCTGATGTTCACAAGGACCCTCAAGAAGTCATTCCTCAGGAACCTTCAGT
AGACGCAGGTTCTTGCAAGTGCCAGACTTGTGGGCCCCAACAAAGTATTGGTCTAGACGTTGGT
TCATCCGGAGACCGGTGTCCTCAGCCTTTCCAGAAGCGGTCAGTCATAGTTGAGAACTCAGGCT
GTACCGTCGCTTCTGAGCTGATAAAACCCATGAAAAAGAGGAAACATAAGGAGTATCAGAGCCC
GTCAGAGGAGTCCGAGCCGGAGGCCATGAAGCAAGGAAAAGGAAAAGACCCAGACAGAGAGCCC
ACCCCGGGCACCTCAGAGAATGAGGAGTGGAGCAGAAGCCAGCTGGTGTCCAGTGAGAAGAAGG
AAGGCTGGTCCTGGGAGTCCTACCTGGAGGAGCAGAAGGCAGTCACGGCCCCAGTTAGCCTCTT
CCAGGACTCCCAGGCAGTCACCCATAACAAGAATGGCTTCAAACTGGGCATGAAGCTAGAGGGC
GTTGACCCCCAACACCCGTCCATGTACTTCGTCCTCACTGTGGCTGAGGTGTGTGGCTACCGCC
TGCGTCTGCACTTTGATGGCTACTCTGAGTGCCATGACTTCTGGGTCAATGCCAACTCCCCGGA
CATTCATCCTGCCGGCTGGTTTGAGAAGACTGGACACAAGCTGCAGCCTCCCAAAGGTTACAAG
GAGGAGGAGTTCAGCTGGAGCCAGTACCTGCGCAGCACGAAAGCTCAGGCAGCCCCCAAGCATC
TGTTTGTGAGCCAGAGCCACAGTCCTCCGCCGGTGGGCTTCCAGGTGGGCATGAAGCTAGAAGC
TGTGGACCGCATGAACCCATCCCTCGTGTGTGTGGCCAGCGTGACCGATGTGGTGGCCAGCCGC
TTCCTGGTGCACTTTGATGACTGGGACGATACTTATGACTACTGGTGTGATGCCAGCAGCCCCT
ACATCCACCCAGTAGGCTGGTGCCAGAAGCAAGGAAAGCCCCTTACCCCTCCACAAGACTACCC
AGACCCTGACAGCTTCTGCTGGGAGAAATATCTAGAAGAAACTGGGACCTCAGCTGTGCCCACT
TGGGCCTTCAAAGTGCGACCCCCTCACAGCTTCCTGGTCAACATGAAGCTGGAGGCTGTAGACC
GCCGGAACCCAGCACTGATTCGGGTAGCCAGTGTGGAGGATGTGGAGGATCACCGGATAAAGCT
CCACTTTGATGGCTGGAGTCACAACTATGATTTCTGGATTGATGCTGATCACCCGGACATCCAT
CCTGCAGGCTGGTGCTCCAAGACAGGACATCCCCTGGAGCCTCCTCTCCGGCCCAGAGAGTCCA
GCTCTGCCTCCCCTGGGGGATGCCCCCCTCTCAGCCACAGGAGCCCACCCCACACAAAGACCTC
CAAGTATAGCTTTCACCACCGGAAGTGCCCCACTCCTGGCTGTGACGGCTCCGGCCATGTCACT
GGTAAGTTCACAGCTCATCACTGCCTCTCTGGCTGCCCACTGGCTGAGAGGAACCAGAGCCGGC
TGAAAGCGGAGCTGTCCGACTCAGAGACCACAGCCAGGAAGAAGAACCAGTCTAATTTGTCCCC
AAGGAAAAAGCCTCGCCATCAAGGCCGGATTGGACGCCCTCCAAAGTATCGCAAGATGCCAGAT
GAAGATTTCCAAGCCCTCCCTCCCAGTGTGGTACACCAGTCCCTCTTCATGTCCACCTTGCCGA
CCCACGCTGATCGCCCACTGTCTGTGTGCTGGGAGCAACACTGCAAGCTGTTGCCAGGAGTGGC
AGGCATCTCAGCCTCCGCAGTCTCCAAGTGGACCATCGAAGAGGTCTTTGGCTTCGTTCAGACC
TTGACGGGCTCTGAGGACCAAGCGCGCCTCTTCAAAGAGGAGATGATTGACGGCGAGGCCTTCC
TTTTGCTGACACAGGCGGATATTGTGAAGATCATGAGTGTCAAGCTGGGCCCAGCTTTGAAGAT
CTATAATGCCATTCTCATGTTCAAAAACAATGACGATGTCTTTAAGTGACTGACTGGGGGGGGG
GGGCAGTGTGGAATGCTCCTCCCACCCTCGCTGGGCTCCCTCTGCAGATGGTGCTTCTCTCCCA
ACTTGAGTTCTGCACCCCTGCCCTCACTGTCTGACTAGGTGTACGGGAGCAGAGGCGCCCAGGG
AAGAGGGTCTAAGTCCTCAGTCCTGGAGTTCATTTGTCTCCAGTTGCCCCAGGGAGGGTGTGAC
TAAACTGAGGCCTGACTGACAGAAAGGGCTGCACGTATCCTGACTAGGGCAGCCACCTTGGTTA
TCGTCTTAGGAAGTAGAAAGACATGGTAGGCAGTCTCTATTCAGACCTATGTCCTTCTTGGCAT
CTCGATGCCCTTTCTCCTCCTCGGACCCTCTCTTCCTATTAAGAAGTGACCATGACCTTGGCAT
ACATATTTACACATGAAAGGTGCCTCCTCCCTTTCTGCTGGTAGCTATGTACCCTTGCTCCCCA
TTCATGGTCCAGCCAGGCCCCATGGCTCTTCCCCTGTAGATGCTTAAGTCTCAGAAATATGGGA
ACTTCCTACTAGGAGCCTCTGGCTGTCTAGGCAGAGATTCAGAACCAAGGCACCTTCCTGAACA
CATTCAGTTCAGGATCACTGAGCACTGAAGTGGGCATACGGAGTGAGCAGATGGTTAAAGCCCC
TGTCATAACAAGCAGGGTCTAAGTCCCCTGATGCTTTCTCTGTTGGGTGTGGGGAGAAGCCTGG
CCTGACTAGCAGTCCAGGCTAGGATATCGTCAGACACATCGGCGTCTTTGACCTGAAGAGTAGC
TCCAGAAAGCACGACAGCAGCATCCTTCTCTCTGTGTCTGTGGATCTCAGCCAAGATATCACAC
ATGAGGGAGAGTCCCCTGCCAGCCCAGCCTGCCAGTAGAGTGTAGCCGTCCAGCATACAACCCC
TGTGACATCACGTCCACTCTGTCCCTTAAACGTTTTTCATTTTGCTCTTAAGACTAACAAAGGC
CACTTACAGTAGAAAGTTGGAAAGGTCCCCTCTCCTGGCCTTTCCTGCCAGTCTCCAACAGTCT
CTCACTGCCAGCTAGGTTCCTGCTGGGGCTCTAGGACTTGGACCTTTCCGTCCGAGTAGAGATT
CAGCCTCTGCTCAATTACTGCCAAACCCGCCTCCCAGCCTAAGCGGGGAGTGCCAGAGCCCAAT
AGGTGGGAACCAGTGCCAAGCATCATCTGGTGCTGAGGTGGGCCCGCAGGCTGAAGAGCAGGGT
CGTCCCCCAGTCTGGTATACTTCTAAGTCGTGGTGTGTGTGTGTGTGTGTGT

hide sequence

RefSeq Acc Id:

XM_017592281 ⟹ XP_017447770

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	172,014,774 - 172,053,181 (+)	NCBI
mRatBN7.2	3	151,597,903 - 151,633,657 (+)	NCBI
Rnor_6.0	3	159,316,580 - 159,348,914 (+)	NCBI

Sequence:

show sequence

TGTGTGTGTGTGTGTGTGTGAGTGAAGAGGCTTCTGTGGATATGGTTATCCCCATCCTTTTCTG
ACTAATCTTGTTCCTAAAAATACAAAATGTGATTAAAACTGTGGAGGCAAGGCAGAACACGTGT
AAAGAGTAGTTAAGATCTATATAAATTTAAACTGTTGATCACAGCAGTTGGGAGAATACCATTT
AAATAAGAACTATCTTTCATCTGGACTAAATCTAAAGATTTGGCTGATGGCTAGCTACTACATA
AGCCAAGTAAACCTGTTTTCTTTTCTGCGAAATAAAGGAGTAAAATTAAAAATGAGTGTATAAG
AGGGAACTGGGGCGACTGAAGAGTTGACCTCTTTCACATGGGTTAGTCAATCAGAAGACACGAG
TACCCACTCTGCTAGTACTGCGGATACTAAGAACCAGTGGGTTTCTTCCTAGAGTGTGGGGTCT
CTTTAACTCCTGAGTTACTCAAGTCTCCTATGATACAGGCGTGGTGTTAGAATAAGAACCAATA
AAAATAGCGGTCTGGTAGAGACAGATCAATTAAAAAAAAGTGGAAGGCACAAGAGCAATGATTT
GCTCAAATCAACACAAAAGGAACCATTCTCGAACTCTAGAATGCAGCATGATAGTCTTCCAATG
TTCAGTGGAAGCGCAGGAGGTACAGTGATGTTCCCAGGGAACATGGTCAACCAGTGGCAGTGGA
TCATCCAAAGGCTGCTATGGCTGGGGTCCTCGATGCCAAGCAAGCTCAAGGCGTCCCTACTATG
GTTGTGCGTGCTCTTCACCCATTCTATGAGTTCCCTGAAACTCCTAAAGTCCCCTCCAAATGTG
GAACCCGACTTAGGCAAGGTTGCAGCCTTGCTGGATAAGACGGCCTGGAAGGAATCCAACAGGC
TAACTGCTTCTGGCTCTGTGGTTCCCAGGATGCTATAAAAACCTCCACCCACTTCTCCAGCGCA
GCTAGCGGGTCTCACAGGGGAGAGACAATTAAGCCTGCACCCCCAAGGCTCCGACGGAAAGCAA
AAGCTGTAACCTAGGGCCATGGCCATGCAGACCCGCCAGCTAAGGAGCTCTGAGCCCCCTCTGC
AGGGTACAGGCCCGCCCCCTGTGTGCGCAGGCGCGCGCCGCACCAGGCTCCCACGGTCGCTCGG
TGCGGGCGGCAACCGCCAGCCTTGCAGACGCAACCAGATGGAGGGGCACAGTGACATGGAAATA
ATAAGGGCAGTGAAAGGGTCTGCCACGGGGGAGATCAACGTACACCTGGTGGCCAGAGACAGCG
CGGGTTCCCACCCTCACCTGCCTACAACCACCTTCATCATTCCTACCAATGCAGCTACCCTTGG
TCTGCCTAGCACTGCCCTGGATGTGTCCTACCCCCGGGAGCCAGTCCACGTGGGCGCAGCGGAG
CGAGTGGCTGGCAGCGAACCCGTCACAGCCACCATTCTGCCACAGCTGAGCACCGGACCAGGGA
CCAATAGCACAGTCAGGCTTCTGGACTGGACAGGGGTTTCTGCACCTTTAGCTGGGAGCGGCAT
GAGGCCCTCAGAACTTGGTCCTGCATCCCAGTTCCGGATAAACGAGTACGCGACACAGAACATG
ATCGAAATAGAGCGGCCACGAAGCCCAGAGCAGCGACATGAGGGTGGCACGGCTGGAAGAGAAG
CAGACATCCAGCACCCTGATGTTCACAAGGACCCTCAAGAAGTCATTCCTCAGGAACCTTCAGT
AGACGCAGGTTCTTGCAAGTGCCAGACTTGTGGGCCCCAACAAAGTATTGGTCTAGACGTTGGT
TCATCCGGAGACCGGTGTCCTCAGCCTTTCCAGAAGCGGTCAGTCATAGTTGAGAACTCAGGCT
GTACCGTCGCTTCTGAGCTGATAAAACCCATGAAAAAGAGGAAACATAAGGAGTATCAGAGCCC
GTCAGAGGAGTCCGAGCCGGAGGCCATGCAAGGAAAAGGAAAAGACCCAGACAGAGAGCCCACC
CCGGGCACCTCAGAGAATGAGGAGTGGAGCAGAAGCCAGCTGGTGTCCAGTGAGAAGAAGGAAG
GCTGGTCCTGGGAGTCCTACCTGGAGGAGCAGAAGGCAGTCACGGCCCCAGTTAGCCTCTTCCA
GGACTCCCAGGCAGTCACCCATAACAAGAATGGCTTCAAACTGGGCATGAAGCTAGAGGGCGTT
GACCCCCAACACCCGTCCATGTACTTCGTCCTCACTGTGGCTGAGGTGTGTGGCTACCGCCTGC
GTCTGCACTTTGATGGCTACTCTGAGTGCCATGACTTCTGGGTCAATGCCAACTCCCCGGACAT
TCATCCTGCCGGCTGGTTTGAGAAGACTGGACACAAGCTGCAGCCTCCCAAAGGTTACAAGGAG
GAGGAGTTCAGCTGGAGCCAGTACCTGCGCAGCACGAAAGCTCAGGCAGCCCCCAAGCATCTGT
TTGTGAGCCAGAGCCACAGTCCTCCGCCGGTGGGCTTCCAGGTGGGCATGAAGCTAGAAGCTGT
GGACCGCATGAACCCATCCCTCGTGTGTGTGGCCAGCGTGACCGATGTGGTGGCCAGCCGCTTC
CTGGTGCACTTTGATGACTGGGACGATACTTATGACTACTGGTGTGATGCCAGCAGCCCCTACA
TCCACCCAGTAGGCTGGTGCCAGAAGCAAGGAAAGCCCCTTACCCCTCCACAAGACTACCCAGA
CCCTGACAGCTTCTGCTGGGAGAAATATCTAGAAGAAACTGGGACCTCAGCTGTGCCCACTTGG
GCCTTCAAAGTGCGACCCCCTCACAGCTTCCTGGTCAACATGAAGCTGGAGGCTGTAGACCGCC
GGAACCCAGCACTGATTCGGGTAGCCAGTGTGGAGGATGTGGAGGATCACCGGATAAAGCTCCA
CTTTGATGGCTGGAGTCACAACTATGATTTCTGGATTGATGCTGATCACCCGGACATCCATCCT
GCAGGCTGGTGCTCCAAGACAGGACATCCCCTGGAGCCTCCTCTCCGGCCCAGAGAGTCCAGCT
CTGCCTCCCCTGGGGGATGCCCCCCTCTCAGCCACAGGAGCCCACCCCACACAAAGACCTCCAA
GTATAGCTTTCACCACCGGAAGTGCCCCACTCCTGGCTGTGACGGCTCCGGCCATGTCACTGGT
AAGTTCACAGCTCATCACTGCCTCTCTGGCTGCCCACTGGCTGAGAGGAACCAGAGCCGGCTGA
AAGCGGAGCTGTCCGACTCAGAGACCACAGCCAGGAAGAAGAACCAGTCTAATTTGTCCCCAAG
GAAAAAGCCTCGCCATCAAGGCCGGATTGGACGCCCTCCAAAGTATCGCAAGATGCCAGATGAA
GATTTCCAAGCCCTCCCTCCCAGTGTGGTACACCAGTCCCTCTTCATGTCCACCTTGCCGACCC
ACGCTGATCGCCCACTGTCTGTGTGCTGGGAGCAACACTGCAAGCTGTTGCCAGGAGTGGCAGG
CATCTCAGCCTCCGCAGTCTCCAAGTGGACCATCGAAGAGGTCTTTGGCTTCGTTCAGACCTTG
ACGGGCTCTGAGGACCAAGCGCGCCTCTTCAAAGAGGAGATGATTGACGGCGAGGCCTTCCTTT
TGCTGACACAGGCGGATATTGTGAAGATCATGAGTGTCAAGCTGGGCCCAGCTTTGAAGATCTA
TAATGCCATTCTCATGTTCAAAAACAATGACGATGTCTTTAAGTGACTGACTGGGGGGGGGGGG
CAGTGTGGAATGCTCCTCCCACCCTCGCTGGGCTCCCTCTGCAGATGGTGCTTCTCTCCCAACT
TGAGTTCTGCACCCCTGCCCTCACTGTCTGACTAGGTGTACGGGAGCAGAGGCGCCCAGGGAAG
AGGGTCTAAGTCCTCAGTCCTGGAGTTCATTTGTCTCCAGTTGCCCCAGGGAGGGTGTGACTAA
ACTGAGGCCTGACTGACAGAAAGGGCTGCACGTATCCTGACTAGGGCAGCCACCTTGGTTATCG
TCTTAGGAAGTAGAAAGACATGGTAGGCAGTCTCTATTCAGACCTATGTCCTTCTTGGCATCTC
GATGCCCTTTCTCCTCCTCGGACCCTCTCTTCCTATTAAGAAGTGACCATGACCTTGGCATACA
TATTTACACATGAAAGGTGCCTCCTCCCTTTCTGCTGGTAGCTATGTACCCTTGCTCCCCATTC
ATGGTCCAGCCAGGCCCCATGGCTCTTCCCCTGTAGATGCTTAAGTCTCAGAAATATGGGAACT
TCCTACTAGGAGCCTCTGGCTGTCTAGGCAGAGATTCAGAACCAAGGCACCTTCCTGAACACAT
TCAGTTCAGGATCACTGAGCACTGAAGTGGGCATACGGAGTGAGCAGATGGTTAAAGCCCCTGT
CATAACAAGCAGGGTCTAAGTCCCCTGATGCTTTCTCTGTTGGGTGTGGGGAGAAGCCTGGCCT
GACTAGCAGTCCAGGCTAGGATATCGTCAGACACATCGGCGTCTTTGACCTGAAGAGTAGCTCC
AGAAAGCACGACAGCAGCATCCTTCTCTCTGTGTCTGTGGATCTCAGCCAAGATATCACACATG
AGGGAGAGTCCCCTGCCAGCCCAGCCTGCCAGTAGAGTGTAGCCGTCCAGCATACAACCCCTGT
GACATCACGTCCACTCTGTCCCTTAAACGTTTTTCATTTTGCTCTTAAGACTAACAAAGGCCAC
TTACAGTAGAAAGTTGGAAAGGTCCCCTCTCCTGGCCTTTCCTGCCAGTCTCCAACAGTCTCTC
ACTGCCAGCTAGGTTCCTGCTGGGGCTCTAGGACTTGGACCTTTCCGTCCGAGTAGAGATTCAG
CCTCTGCTCAATTACTGCCAAACCCGCCTCCCAGCCTAAGCGGGGAGTGCCAGAGCCCAATAGG
TGGGAACCAGTGCCAAGCATCATCTGGTGCTGAGGTGGGCCCGCAGGCTGAAGAGCAGGGTCGT
CCCCCAGTCTGGTATACTTCTAAGTCGTGGTGTGTGTGTGTGTGTGTGT

hide sequence

RefSeq Acc Id:

XM_039106720 ⟹ XP_038962648

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	172,021,358 - 172,053,181 (+)	NCBI
mRatBN7.2	3	151,601,825 - 151,633,657 (+)	NCBI

RefSeq Acc Id:

XM_039106721 ⟹ XP_038962649

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	172,021,459 - 172,053,181 (+)	NCBI
mRatBN7.2	3	151,602,868 - 151,633,657 (+)	NCBI

RefSeq Acc Id:

XM_039106722 ⟹ XP_038962650

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	172,014,774 - 172,041,240 (+)	NCBI
mRatBN7.2	3	151,597,903 - 151,620,066 (+)	NCBI

RefSeq Acc Id:

XM_230849 ⟹ XP_230849

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	172,014,774 - 172,053,181 (+)	NCBI
mRatBN7.2	3	151,597,903 - 151,633,657 (+)	NCBI
Rnor_6.0	3	159,316,580 - 159,348,914 (+)	NCBI
Rnor_5.0	3	165,513,621 - 165,545,362 (+)	NCBI
RGSC_v3.4	3	153,811,334 - 153,836,990 (+)	RGD

Sequence:

show sequence

TGTGTGTGTGTGTGTGTGTGAGTGAAGAGGCTTCTGTGGATATGGTTATCCCCATCCTTTTCTG
ACTAATCTTGTTCCTAAAAATACAAAATGTGATTAAAACTGTGGAGGCAAGGCAGAACACGTGT
AAAGAGTAGTTAAGATCTATATAAATTTAAACTGTTGATCACAGCAGTTGGGAGAATACCATTT
AAATAAGAACTATCTTTCATCTGGACTAAATCTAAAGATTTGGCTGATGGCTAGCTACTACATA
AGCCAAGTAAACCTGTTTTCTTTTCTGCGAAATAAAGGAGTAAAATTAAAAATGAGTGTATAAG
AGGGAACTGGGGCGACTGAAGAGTTGACCTCTTTCACATGGGTTAGTCAATCAGAAGACACGAG
TACCCACTCTGCTAGTACTGCGGATACTAAGAACCAGTGGGTTTCTTCCTAGAGTGTGGGGTCT
CTTTAACTCCTGAGTTACTCAAGTCTCCTATGATACAGGCGTGGTGTTAGAATAAGAACCAATA
AAAATAGCGGTCTGGTAGAGACAGATCAATTAAAAAAAAGTGGAAGGCACAAGAGCAATGATTT
GCTCAAATCAACACAAAAGGAACCATTCTCGAACTCTAGAATGCAGCATGATAGTCTTCCAATG
TTCAGTGGAAGCGCAGGAGGTACAGTGATGTTCCCAGGGAACATGGTCAACCAGTGGCAGTGGA
TCATCCAAAGGCTGCTATGGCTGGGGTCCTCGATGCCAAGCAAGCTCAAGGCGTCCCTACTATG
GTTGTGCGTGCTCTTCACCCATTCTATGAGTTCCCTGAAACTCCTAAAGTCCCCTCCAAATGTG
GAACCCGACTTAGGCAAGGTTGCAGCCTTGCTGGATAAGACGGCCTGGAAGGAATCCAACAGGC
TAACTGCTTCTGGCTCTGTGGTTCCCAGGATGCTATAAAAACCTCCACCCACTTCTCCAGCGCA
GCTAGCGGGTCTCACAGGGGAGAGACAATTAAGCCTGCACCCCCAAGGCTCCGACGGAAAGCAA
AAGCTGTAACCTAGGGCCATGGCCATGCAGACCCGCCAGCTAAGGAGCTCTGAGCCCCCTCTGC
AGGGTACAGGCCCGCCCCCTGTGTGCGCAGGCGCGCGCCGCACCAGGCTCCCACGGTCGCTCGG
TGCGGGCGGCAACCGCCAGCCTTGCAGACGCAACCAGATGGAGGGGCACAGTGACATGGAAATA
ATAAGGGCAGTGAAAGGGTCTGCCACGGGGGAGATCAACGTACACCTGGTGGCCAGAGACAGCG
CGGGTTCCCACCCTCACCTGCCTACAACCACCTTCATCATTCCTACCAATGCAGCTACCCTTGG
TCTGCCTAGCACTGCCCTGGATGTGTCCTACCCCCGGGAGCCAGTCCACGTGGGCGCAGCGGAG
CGAGTGGCTGGCAGCGAACCCGTCACAGCCACCATTCTGCCACAGCTGAGCACCGGACCAGGGA
CCAATAGCACAGTCAGGCTTCTGGACTGGACAGGGGTTTCTGCACCTTTAGCTGGGAGCGGCAT
GAGGTTCCGGATAAACGAGTACGCGACACAGAACATGATCGAAATAGAGCGGCCACGAAGCCCA
GAGCAGCGACATGAGGGTGGCACGGCTGGAAGAGAAGCAGACATCCAGCACCCTGATGTTCACA
AGGACCCTCAAGAAGTCATTCCTCAGGAACCTTCAGTAGACGCAGGTTCTTGCAAGTGCCAGAC
TTGTGGGCCCCAACAAAGTATTGGTCTAGACGTTGGTTCATCCGGAGACCGGTGTCCTCAGCCT
TTCCAGAAGCGGTCAGTCATAGTTGAGAACTCAGGCTGTACCGTCGCTTCTGAGCTGATAAAAC
CCATGAAAAAGAGGAAACATAAGGAGTATCAGAGCCCGTCAGAGGAGTCCGAGCCGGAGGCCAT
GAAGCAAGGAAAAGGAAAAGACCCAGACAGAGAGCCCACCCCGGGCACCTCAGAGAATGAGGAG
TGGAGCAGAAGCCAGCTGGTGTCCAGTGAGAAGAAGGAAGGCTGGTCCTGGGAGTCCTACCTGG
AGGAGCAGAAGGCAGTCACGGCCCCAGTTAGCCTCTTCCAGGACTCCCAGGCAGTCACCCATAA
CAAGAATGGCTTCAAACTGGGCATGAAGCTAGAGGGCGTTGACCCCCAACACCCGTCCATGTAC
TTCGTCCTCACTGTGGCTGAGGTGTGTGGCTACCGCCTGCGTCTGCACTTTGATGGCTACTCTG
AGTGCCATGACTTCTGGGTCAATGCCAACTCCCCGGACATTCATCCTGCCGGCTGGTTTGAGAA
GACTGGACACAAGCTGCAGCCTCCCAAAGGTTACAAGGAGGAGGAGTTCAGCTGGAGCCAGTAC
CTGCGCAGCACGAAAGCTCAGGCAGCCCCCAAGCATCTGTTTGTGAGCCAGAGCCACAGTCCTC
CGCCGGTGGGCTTCCAGGTGGGCATGAAGCTAGAAGCTGTGGACCGCATGAACCCATCCCTCGT
GTGTGTGGCCAGCGTGACCGATGTGGTGGCCAGCCGCTTCCTGGTGCACTTTGATGACTGGGAC
GATACTTATGACTACTGGTGTGATGCCAGCAGCCCCTACATCCACCCAGTAGGCTGGTGCCAGA
AGCAAGGAAAGCCCCTTACCCCTCCACAAGACTACCCAGACCCTGACAGCTTCTGCTGGGAGAA
ATATCTAGAAGAAACTGGGACCTCAGCTGTGCCCACTTGGGCCTTCAAAGTGCGACCCCCTCAC
AGCTTCCTGGTCAACATGAAGCTGGAGGCTGTAGACCGCCGGAACCCAGCACTGATTCGGGTAG
CCAGTGTGGAGGATGTGGAGGATCACCGGATAAAGCTCCACTTTGATGGCTGGAGTCACAACTA
TGATTTCTGGATTGATGCTGATCACCCGGACATCCATCCTGCAGGCTGGTGCTCCAAGACAGGA
CATCCCCTGGAGCCTCCTCTCCGGCCCAGAGAGTCCAGCTCTGCCTCCCCTGGGGGATGCCCCC
CTCTCAGCCACAGGAGCCCACCCCACACAAAGACCTCCAAGTATAGCTTTCACCACCGGAAGTG
CCCCACTCCTGGCTGTGACGGCTCCGGCCATGTCACTGGTAAGTTCACAGCTCATCACTGCCTC
TCTGGCTGCCCACTGGCTGAGAGGAACCAGAGCCGGCTGAAAGCGGAGCTGTCCGACTCAGAGA
CCACAGCCAGGAAGAAGAACCAGTCTAATTTGTCCCCAAGGAAAAAGCCTCGCCATCAAGGCCG
GATTGGACGCCCTCCAAAGTATCGCAAGATGCCAGATGAAGATTTCCAAGCCCTCCCTCCCAGT
GTGGTACACCAGTCCCTCTTCATGTCCACCTTGCCGACCCACGCTGATCGCCCACTGTCTGTGT
GCTGGGAGCAACACTGCAAGCTGTTGCCAGGAGTGGCAGGCATCTCAGCCTCCGCAGTCTCCAA
GTGGACCATCGAAGAGGTCTTTGGCTTCGTTCAGACCTTGACGGGCTCTGAGGACCAAGCGCGC
CTCTTCAAAGAGGAGATGATTGACGGCGAGGCCTTCCTTTTGCTGACACAGGCGGATATTGTGA
AGATCATGAGTGTCAAGCTGGGCCCAGCTTTGAAGATCTATAATGCCATTCTCATGTTCAAAAA
CAATGACGATGTCTTTAAGTGACTGACTGGGGGGGGGGGGCAGTGTGGAATGCTCCTCCCACCC
TCGCTGGGCTCCCTCTGCAGATGGTGCTTCTCTCCCAACTTGAGTTCTGCACCCCTGCCCTCAC
TGTCTGACTAGGTGTACGGGAGCAGAGGCGCCCAGGGAAGAGGGTCTAAGTCCTCAGTCCTGGA
GTTCATTTGTCTCCAGTTGCCCCAGGGAGGGTGTGACTAAACTGAGGCCTGACTGACAGAAAGG
GCTGCACGTATCCTGACTAGGGCAGCCACCTTGGTTATCGTCTTAGGAAGTAGAAAGACATGGT
AGGCAGTCTCTATTCAGACCTATGTCCTTCTTGGCATCTCGATGCCCTTTCTCCTCCTCGGACC
CTCTCTTCCTATTAAGAAGTGACCATGACCTTGGCATACATATTTACACATGAAAGGTGCCTCC
TCCCTTTCTGCTGGTAGCTATGTACCCTTGCTCCCCATTCATGGTCCAGCCAGGCCCCATGGCT
CTTCCCCTGTAGATGCTTAAGTCTCAGAAATATGGGAACTTCCTACTAGGAGCCTCTGGCTGTC
TAGGCAGAGATTCAGAACCAAGGCACCTTCCTGAACACATTCAGTTCAGGATCACTGAGCACTG
AAGTGGGCATACGGAGTGAGCAGATGGTTAAAGCCCCTGTCATAACAAGCAGGGTCTAAGTCCC
CTGATGCTTTCTCTGTTGGGTGTGGGGAGAAGCCTGGCCTGACTAGCAGTCCAGGCTAGGATAT
CGTCAGACACATCGGCGTCTTTGACCTGAAGAGTAGCTCCAGAAAGCACGACAGCAGCATCCTT
CTCTCTGTGTCTGTGGATCTCAGCCAAGATATCACACATGAGGGAGAGTCCCCTGCCAGCCCAG
CCTGCCAGTAGAGTGTAGCCGTCCAGCATACAACCCCTGTGACATCACGTCCACTCTGTCCCTT
AAACGTTTTTCATTTTGCTCTTAAGACTAACAAAGGCCACTTACAGTAGAAAGTTGGAAAGGTC
CCCTCTCCTGGCCTTTCCTGCCAGTCTCCAACAGTCTCTCACTGCCAGCTAGGTTCCTGCTGGG
GCTCTAGGACTTGGACCTTTCCGTCCGAGTAGAGATTCAGCCTCTGCTCAATTACTGCCAAACC
CGCCTCCCAGCCTAAGCGGGGAGTGCCAGAGCCCAATAGGTGGGAACCAGTGCCAAGCATCATC
TGGTGCTGAGGTGGGCCCGCAGGCTGAAGAGCAGGGTCGTCCCCCAGTCTGGTATACTTCTAAG
TCGTGGTGTGTGTGTGTGTGTGTGT

hide sequence

Protein Sequences


Protein RefSeqs	NP_001406545	(Get FASTA)	NCBI Sequence Viewer
	XP_017447769	(Get FASTA)	NCBI Sequence Viewer
	XP_017447770	(Get FASTA)	NCBI Sequence Viewer
	XP_038962648	(Get FASTA)	NCBI Sequence Viewer
	XP_038962649	(Get FASTA)	NCBI Sequence Viewer
	XP_038962650	(Get FASTA)	NCBI Sequence Viewer
	XP_230849	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	D3ZWK4	(Get FASTA)	NCBI Sequence Viewer
	EDL96599	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000049326
	ENSRNOP00000049326.3

RefSeq Acc Id:

XP_230849 ⟸ XM_230849

- Peptide Label:

isoform X3

- Sequence:

show sequence

MAMQTRQLRSSEPPLQGTGPPPVCAGARRTRLPRSLGAGGNRQPCRRNQMEGHSDMEIIRAVKG
SATGEINVHLVARDSAGSHPHLPTTTFIIPTNAATLGLPSTALDVSYPREPVHVGAAERVAGSE
PVTATILPQLSTGPGTNSTVRLLDWTGVSAPLAGSGMRFRINEYATQNMIEIERPRSPEQRHEG
GTAGREADIQHPDVHKDPQEVIPQEPSVDAGSCKCQTCGPQQSIGLDVGSSGDRCPQPFQKRSV
IVENSGCTVASELIKPMKKRKHKEYQSPSEESEPEAMKQGKGKDPDREPTPGTSENEEWSRSQL
VSSEKKEGWSWESYLEEQKAVTAPVSLFQDSQAVTHNKNGFKLGMKLEGVDPQHPSMYFVLTVA
EVCGYRLRLHFDGYSECHDFWVNANSPDIHPAGWFEKTGHKLQPPKGYKEEEFSWSQYLRSTKA
QAAPKHLFVSQSHSPPPVGFQVGMKLEAVDRMNPSLVCVASVTDVVASRFLVHFDDWDDTYDYW
CDASSPYIHPVGWCQKQGKPLTPPQDYPDPDSFCWEKYLEETGTSAVPTWAFKVRPPHSFLVNM
KLEAVDRRNPALIRVASVEDVEDHRIKLHFDGWSHNYDFWIDADHPDIHPAGWCSKTGHPLEPP
LRPRESSSASPGGCPPLSHRSPPHTKTSKYSFHHRKCPTPGCDGSGHVTGKFTAHHCLSGCPLA
ERNQSRLKAELSDSETTARKKNQSNLSPRKKPRHQGRIGRPPKYRKMPDEDFQALPPSVVHQSL
FMSTLPTHADRPLSVCWEQHCKLLPGVAGISASAVSKWTIEEVFGFVQTLTGSEDQARLFKEEM
IDGEAFLLLTQADIVKIMSVKLGPALKIYNAILMFKNNDDVFK

hide sequence

RefSeq Acc Id:

XP_017447769 ⟸ XM_017592280

- Peptide Label:

isoform X1

- Sequence:

show sequence

MAMQTRQLRSSEPPLQGTGPPPVCAGARRTRLPRSLGAGGNRQPCRRNQMEGHSDMEIIRAVKG
SATGEINVHLVARDSAGSHPHLPTTTFIIPTNAATLGLPSTALDVSYPREPVHVGAAERVAGSE
PVTATILPQLSTGPGTNSTVRLLDWTGVSAPLAGSGMRPSELGPASQFRINEYATQNMIEIERP
RSPEQRHEGGTAGREADIQHPDVHKDPQEVIPQEPSVDAGSCKCQTCGPQQSIGLDVGSSGDRC
PQPFQKRSVIVENSGCTVASELIKPMKKRKHKEYQSPSEESEPEAMKQGKGKDPDREPTPGTSE
NEEWSRSQLVSSEKKEGWSWESYLEEQKAVTAPVSLFQDSQAVTHNKNGFKLGMKLEGVDPQHP
SMYFVLTVAEVCGYRLRLHFDGYSECHDFWVNANSPDIHPAGWFEKTGHKLQPPKGYKEEEFSW
SQYLRSTKAQAAPKHLFVSQSHSPPPVGFQVGMKLEAVDRMNPSLVCVASVTDVVASRFLVHFD
DWDDTYDYWCDASSPYIHPVGWCQKQGKPLTPPQDYPDPDSFCWEKYLEETGTSAVPTWAFKVR
PPHSFLVNMKLEAVDRRNPALIRVASVEDVEDHRIKLHFDGWSHNYDFWIDADHPDIHPAGWCS
KTGHPLEPPLRPRESSSASPGGCPPLSHRSPPHTKTSKYSFHHRKCPTPGCDGSGHVTGKFTAH
HCLSGCPLAERNQSRLKAELSDSETTARKKNQSNLSPRKKPRHQGRIGRPPKYRKMPDEDFQAL
PPSVVHQSLFMSTLPTHADRPLSVCWEQHCKLLPGVAGISASAVSKWTIEEVFGFVQTLTGSED
QARLFKEEMIDGEAFLLLTQADIVKIMSVKLGPALKIYNAILMFKNNDDVFK

hide sequence

RefSeq Acc Id:

XP_017447770 ⟸ XM_017592281

- Peptide Label:

isoform X2

- Sequence:

show sequence

MAMQTRQLRSSEPPLQGTGPPPVCAGARRTRLPRSLGAGGNRQPCRRNQMEGHSDMEIIRAVKG
SATGEINVHLVARDSAGSHPHLPTTTFIIPTNAATLGLPSTALDVSYPREPVHVGAAERVAGSE
PVTATILPQLSTGPGTNSTVRLLDWTGVSAPLAGSGMRPSELGPASQFRINEYATQNMIEIERP
RSPEQRHEGGTAGREADIQHPDVHKDPQEVIPQEPSVDAGSCKCQTCGPQQSIGLDVGSSGDRC
PQPFQKRSVIVENSGCTVASELIKPMKKRKHKEYQSPSEESEPEAMQGKGKDPDREPTPGTSEN
EEWSRSQLVSSEKKEGWSWESYLEEQKAVTAPVSLFQDSQAVTHNKNGFKLGMKLEGVDPQHPS
MYFVLTVAEVCGYRLRLHFDGYSECHDFWVNANSPDIHPAGWFEKTGHKLQPPKGYKEEEFSWS
QYLRSTKAQAAPKHLFVSQSHSPPPVGFQVGMKLEAVDRMNPSLVCVASVTDVVASRFLVHFDD
WDDTYDYWCDASSPYIHPVGWCQKQGKPLTPPQDYPDPDSFCWEKYLEETGTSAVPTWAFKVRP
PHSFLVNMKLEAVDRRNPALIRVASVEDVEDHRIKLHFDGWSHNYDFWIDADHPDIHPAGWCSK
TGHPLEPPLRPRESSSASPGGCPPLSHRSPPHTKTSKYSFHHRKCPTPGCDGSGHVTGKFTAHH
CLSGCPLAERNQSRLKAELSDSETTARKKNQSNLSPRKKPRHQGRIGRPPKYRKMPDEDFQALP
PSVVHQSLFMSTLPTHADRPLSVCWEQHCKLLPGVAGISASAVSKWTIEEVFGFVQTLTGSEDQ
ARLFKEEMIDGEAFLLLTQADIVKIMSVKLGPALKIYNAILMFKNNDDVFK

hide sequence

Ensembl Acc Id:

ENSRNOP00000049326 ⟸ ENSRNOT00000045677

Ensembl Acc Id:

ENSRNOP00000059126 ⟸ ENSRNOT00000063906

RefSeq Acc Id:	XP_038962650 ⟸ XM_039106722
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038962648 ⟸ XM_039106720
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038962649 ⟸ XM_039106721
- Peptide Label:	isoform X4

RefSeq Acc Id:	NP_001406545 ⟸ NM_001419616
- UniProtKB:	D3ZWK4 (UniProtKB/Swiss-Prot), D4A6H6 (UniProtKB/Swiss-Prot)

Protein Domains

SAM

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZWK4-F1-model_v2	AlphaFold	D3ZWK4	1-826	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307316	AgrOrtholog
BioCyc Gene	G2FUF-46927	BioCyc
Ensembl Genes	ENSRNOG00000007044	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000045677	ENTREZGENE
	ENSRNOT00000045677.6	UniProtKB/Swiss-Prot
Gene3D-CATH	1.10.150.50	UniProtKB/Swiss-Prot
	2.30.30.140	UniProtKB/Swiss-Prot
	4.10.320.30	UniProtKB/Swiss-Prot
InterPro	Mbt	UniProtKB/Swiss-Prot
	MBT_L3MBTL1_rpt1	UniProtKB/Swiss-Prot
	MBT_L3MBTL1_rpt3	UniProtKB/Swiss-Prot
	PcG_chromatin_remod_factors	UniProtKB/Swiss-Prot
	SAM	UniProtKB/Swiss-Prot
	SAM/pointed_sf	UniProtKB/Swiss-Prot
	Znf_C2H2C	UniProtKB/Swiss-Prot
	Znf_C2H2C_sf	UniProtKB/Swiss-Prot
NCBI Gene	311613	ENTREZGENE
PANTHER	LETHAL(3)MALIGNANT BRAIN TUMOR-LIKE PROTEIN 1	UniProtKB/Swiss-Prot
	POLYCOMB GROUP PROTEIN	UniProtKB/Swiss-Prot
Pfam	MBT	UniProtKB/Swiss-Prot
	SAM_1	UniProtKB/Swiss-Prot
	zf-C2HC	UniProtKB/Swiss-Prot
PhenoGen	L3mbtl1	PhenoGen
PROSITE	MBT	UniProtKB/Swiss-Prot
	SAM_DOMAIN	UniProtKB/Swiss-Prot
	ZF_CCHHC	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000007044	RatGTEx
SMART	MBT	UniProtKB/Swiss-Prot
	SAM	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF103637	UniProtKB/Swiss-Prot
	SSF47769	UniProtKB/Swiss-Prot
	Tudor/PWWP/MBT	UniProtKB/Swiss-Prot
UniProt	D3ZWK4	ENTREZGENE
	D4A6H6	ENTREZGENE
	LMBL1_RAT	UniProtKB/Swiss-Prot
UniProt Secondary	D4A6H6	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-04-10	L3mbtl1	L3MBTL histone methyl-lysine binding protein 1	L3mbtl1	L3MBTL1, histone methyl-lysine binding protein	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2017-06-21	L3mbtl1	L3MBTL1, histone methyl-lysine binding protein	L3mbtl1	l(3)mbt-like 1 (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2011-08-02	L3mbtl1	l(3)mbt-like 1 (Drosophila)	L3mbtl	l(3)mbt-like (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-07	L3mbtl	l(3)mbt-like (Drosophila)	RGD1307316_predicted	similar to KIAA0681 protein (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	RGD1307316_predicted	similar to KIAA0681 protein (predicted)	LOC311613_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC311613_predicted	similar to KIAA0681 protein (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

RGD Manual Annotations