Advanced Search (OLGA)

Gene: Birc6 (baculoviral IAP repeat-containing 6) Rattus norvegicus

Analyze

Symbol:

Birc6

Name:

baculoviral IAP repeat-containing 6

RGD ID:

1307247

Description:

Predicted to enable cysteine-type endopeptidase inhibitor activity and ubiquitin conjugating enzyme activity. Predicted to be involved in negative regulation of extrinsic apoptotic signaling pathway; placenta development; and regulation of cytokinesis. Predicted to act upstream of or within labyrinthine layer development; positive regulation of cell population proliferation; and spongiotrophoblast layer development. Predicted to be located in several cellular components, including endosome; microtubule cytoskeleton; and midbody. Predicted to be active in nucleus and trans-Golgi network. Orthologous to human BIRC6 (baculoviral IAP repeat containing 6); PARTICIPATES IN ubiquitin/proteasome degradation pathway; INTERACTS WITH 17alpha-ethynylestradiol; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

baculoviral IAP repeat-containing protein 6; LOC313876

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	BIRC6 (baculoviral IAP repeat containing 6)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL
Mus musculus (house mouse):	Birc6 (baculoviral IAP repeat-containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Birc6 (baculoviral IAP repeat containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	BIRC6 (baculoviral IAP repeat containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	BIRC6 (baculoviral IAP repeat containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Birc6 (baculoviral IAP repeat containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	BIRC6 (baculoviral IAP repeat containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	BIRC6 (baculoviral IAP repeat containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Birc6 (baculoviral IAP repeat containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Birc6 (baculoviral IAP repeat containing 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	EPM2A (EPM2A glucan phosphatase, laforin)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	BIRC6 (baculoviral IAP repeat containing 6)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	BIRC6 (baculoviral IAP repeat containing 6)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Birc6 (baculoviral IAP repeat-containing 6)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Birc6 (baculoviral IAP repeat-containing 6)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	birc6 (baculoviral IAP repeat containing 6)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	birc6 (baculoviral IAP repeat containing 6)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Bruce	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Bruce	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	ubc-17	Alliance	DIOPT (Ensembl Compara\|OrthoFinder)
Caenorhabditis elegans (roundworm):	ubc-17	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	birc6	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	birc6	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	26,474,843 - 26,668,275 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	26,474,843 - 26,668,507 (-)	Ensembl				GRCr8
mRatBN7.2	6	20,722,922 - 20,916,396 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	20,722,922 - 20,916,434 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	21,052,875 - 21,246,458 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	21,368,724 - 21,562,308 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	20,849,173 - 21,042,748 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	21,900,763 - 22,092,484 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	21,950,100 - 22,092,346 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	31,789,563 - 31,980,891 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	20,655,186 - 20,848,961 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	20,282,854 - 20,476,452 (-)	NCBI		Celera
RGSC_v3.1	6	20,657,539 - 20,852,541 (-)	NCBI
Cytogenetic Map	6	q13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

adrenocortical carcinoma (ISO)

autism spectrum disorder (ISO)

cholangiocarcinoma (ISO)

clear cell renal cell carcinoma (ISO)

disease of cellular proliferation (ISO)

hereditary breast ovarian cancer syndrome (ISO)

lung squamous cell carcinoma (ISO)

prostate adenocarcinoma (ISO)

Testicular Germ Cell Tumor (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17alpha-ethynylestradiol (EXP,ISO)

17beta-estradiol (EXP,ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2-hydroxypropanoic acid (ISO)

2-palmitoylglycerol (ISO)

3,3',5,5'-tetrabromobisphenol A (ISO)

3,4-methylenedioxymethamphetamine (EXP)

4'-epidoxorubicin (ISO)

4,4'-sulfonyldiphenol (ISO)

5-fluorouracil (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

amitrole (EXP)

amphetamine (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

beta-lapachone (ISO)

bis(2-ethylhexyl) phthalate (EXP,ISO)

bisphenol A (EXP,ISO)

Brevetoxin B (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

CGP 52608 (ISO)

chlorpyrifos (EXP)

cisplatin (ISO)

clobetasol (ISO)

copper(II) sulfate (ISO)

crocidolite asbestos (ISO)

Cuprizon (EXP)

cyclosporin A (ISO)

DDT (EXP)

dextran sulfate (ISO)

dibutyl phthalate (EXP)

dieldrin (ISO)

doxorubicin (ISO)

endosulfan (EXP)

ethanol (ISO)

formaldehyde (ISO)

FR900359 (ISO)

fructose (ISO)

furosemide (EXP)

hydrogen peroxide (ISO)

ivermectin (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methimazole (EXP)

paracetamol (EXP,ISO)

phenobarbital (ISO)

phlorizin (ISO)

poly(I:C) (EXP)

potassium dichromate (ISO)

propylparaben (ISO)

rac-lactic acid (ISO)

silicon dioxide (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

triphenyl phosphate (ISO)

triptonide (ISO)

triticonazole (EXP)

tungsten (ISO)

tunicamycin (ISO)

valproic acid (EXP)

vinclozolin (EXP)

xylitol (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

apoptotic process (IEA)

cell division (IEA)

labyrinthine layer development (ISO)

negative regulation of apoptotic process (IBA,IEA,ISO)

negative regulation of extrinsic apoptotic signaling pathway (IEA,ISO)

placenta development (IEA,ISO)

positive regulation of cell population proliferation (ISO)

protein ubiquitination (IEA)

regulation of cell population proliferation (IEA,ISO)

regulation of cytokinesis (IEA,ISO)

spongiotrophoblast layer development (ISO)

Cellular Component

centrosome (IEA)

endosome (IEA,ISO)

Flemming body (IEA)

Golgi apparatus (IEA,ISO)

membrane (IEA,ISO)

microtubule organizing center (IEA,ISO)

midbody (IEA,ISO)

mitotic spindle (IEA,ISO)

nucleus (IBA)

spindle pole (IEA,ISO)

trans-Golgi network (IBA,IEA,ISO)

Molecular Function

cysteine-type endopeptidase inhibitor activity (IEA,ISO)

metal ion binding (IEA)

peptidase inhibitor activity (IEA)

protein binding (ISO)

transferase activity (IEA)

ubiquitin conjugating enzyme activity (IBA,IEA,ISO)

ubiquitin-protein transferase activity (IEA,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

ubiquitin/proteasome degradation pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Inhibitor of apoptosis proteins: new therapeutic targets in hematological cancer?	de Graaf AO, etal., Leukemia. 2004 Nov;18(11):1751-9.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
4.	Apollon ubiquitinates SMAC and caspase-9, and has an essential cytoprotection function.	Hao Y, etal., Nat Cell Biol. 2004 Sep;6(9):849-60. Epub 2004 Aug 8.
5.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
6.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
7.	The membrane-associated inhibitor of apoptosis protein, BRUCE/Apollon, antagonizes both the precursor and mature forms of Smac and caspase-9.	Qiu XB and Goldberg AL, J Biol Chem. 2005 Jan 7;280(1):174-82. Epub 2004 Oct 26.
8.	GOA pipeline	RGD automated data pipeline
9.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
10.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:9628897	PMID:14765125	PMID:15200957	PMID:15485903	PMID:15887267	PMID:18329369	PMID:19946888	PMID:22871113

Genomics

Comparative Map Data

Birc6
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	26,474,843 - 26,668,275 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	26,474,843 - 26,668,507 (-)	Ensembl				GRCr8
mRatBN7.2	6	20,722,922 - 20,916,396 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	20,722,922 - 20,916,434 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	21,052,875 - 21,246,458 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	21,368,724 - 21,562,308 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	20,849,173 - 21,042,748 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	21,900,763 - 22,092,484 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	21,950,100 - 22,092,346 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	31,789,563 - 31,980,891 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	20,655,186 - 20,848,961 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	20,282,854 - 20,476,452 (-)	NCBI		Celera
RGSC_v3.1	6	20,657,539 - 20,852,541 (-)	NCBI
Cytogenetic Map	6	q13	NCBI

BIRC6
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	32,357,023 - 32,618,878 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	32,357,023 - 32,619,571 (+)	Ensembl			hg38	GRCh38
GRCh37	2	32,582,091 - 32,843,945 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	32,435,600 - 32,697,470 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	2	32,493,964 - 32,754,622	NCBI
Celera	2	32,426,891 - 32,688,789 (+)	NCBI		Celera
Cytogenetic Map	2	p22.3	NCBI
HuRef	2	32,320,949 - 32,583,634 (+)	NCBI		HuRef
CHM1_1	2	32,512,260 - 32,774,075 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	32,405,536 - 32,667,526 (+)	NCBI		T2T-CHM13v2.0

Birc6
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	74,835,247 - 75,010,351 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	74,835,290 - 75,010,351 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	17	74,528,254 - 74,703,356 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	74,528,295 - 74,703,356 (+)	Ensembl			mm10	GRCm38
MGSCv37	17	74,927,635 - 75,103,113 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	17	74,433,277 - 74,608,126 (+)	NCBI		MGSCv36	mm8
Celera	17	78,838,153 - 79,014,648 (+)	NCBI		Celera
Cytogenetic Map	17	E2	NCBI
cM Map	17	45.64	NCBI

Birc6
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955441	739,567 - 922,959 (+)	Ensembl
ChiLan1.0	NW_004955441	740,299 - 923,920 (+)	NCBI	ChiLan1.0	ChiLan1.0

BIRC6
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	93,877,633 - 94,140,932 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	93,881,889 - 94,144,897 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	32,373,479 - 32,633,088 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	33,084,892 - 33,344,219 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	33,084,929 - 33,343,245 (+)	Ensembl			panPan2	panpan1.1

BIRC6
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	25,618,262 - 25,847,920 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	25,617,892 - 25,847,202 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	25,409,075 - 25,638,461 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	26,180,036 - 26,412,717 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
UMICH_Zoey_3.1	17	25,479,687 - 25,710,494 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	25,551,633 - 25,782,725 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	25,651,296 - 25,881,986 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Birc6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	69,724,144 - 69,936,276 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936493	899,961 - 1,115,493 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936493	903,295 - 1,115,434 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

BIRC6
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	107,012,986 - 107,269,477 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	3	107,012,967 - 107,269,370 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	113,955,900 - 114,112,369 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

BIRC6
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	74,879,597 - 75,138,462 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	74,878,700 - 75,138,441 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666045	36,936,136 - 37,192,673 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Birc6
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624738	13,991,022 - 14,246,225 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624738	13,990,997 - 14,246,741 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Birc6
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	7	18,544,267 - 18,736,016 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Birc6
1187 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	140
Count of miRNA genes:	109
Interacting mature miRNAs:	114
Transcripts:	ENSRNOT00000006830
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
8552962	Pigfal16	Plasma insulin-like growth factor 1 level QTL 16	9.4		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	6	1975879	46975879	Rat
8693699	Alc37	Alcohol consumption QTL 37	2.6	0.224	drinking behavior trait (VT:0001422)	calculated ethanol drink intake rate (CMO:0001615)	6	13717169	27053860	Rat
8693645	Alc31	Alcohol consumption QTL 31	3.7	0.038	drinking behavior trait (VT:0001422)	calculated ethanol drink intake rate (CMO:0001615)	6	23284664	29732046	Rat
10401812	Kidm54	Kidney mass QTL 54			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	6	20097635	65097635	Rat
8552910	Pigfal5	Plasma insulin-like growth factor 1 level QTL 5	4.3		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	6	22653889	67653889	Rat
2292589	Emca10	Estrogen-induced mammary cancer QTL 10		0.048	mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	6	22288257	27729050	Rat
10401800	Kidm49	Kidney mass QTL 49			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	6	20097635	65097635	Rat
1300164	Rf15	Renal function QTL 15	3.12		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	6	3239989	48239989	Rat
9589129	Insul24	Insulin level QTL 24	19.06	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	6	1975879	46975879	Rat
7411603	Foco13	Food consumption QTL 13	5.5	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	6	1975879	46975879	Rat
1598843	Cm63	Cardiac mass QTL 63	2.6		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	6	1	44788383	Rat
7411542	Bw127	Body weight QTL 127	5.5	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	6	1975879	46975879	Rat
2292616	Ept15	Estrogen-induced pituitary tumorigenesis QTL 15	4.4		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	6	1	44788383	Rat
9589048	Scfw3	Subcutaneous fat weight QTL 3	4.57	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	6	1975879	46975879	Rat
2293839	Kiddil2	Kidney dilation QTL 2	4.8		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	26618314	86868070	Rat
1576309	Emca7	Estrogen-induced mammary cancer QTL 7	4		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	6	20859430	113082285	Rat
2301964	Bp323	Blood pressure QTL 323	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	6	1	86868070	Rat
2293709	Bss23	Bone structure and strength QTL 23	5.18	0.0001	femur morphology trait (VT:0000559)	femur cross-sectional area (CMO:0001661)	6	3239989	48239989	Rat
2293650	Bss31	Bone structure and strength QTL 31	5.05	0.0001	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	6	3239989	48239989	Rat
2293841	Kiddil4	Kidney dilation QTL 4	4.4		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	26618314	86868070	Rat
1300128	Rf16	Renal function QTL 16	3.89		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	6	1	40163351	Rat
70199	Coreg1	Compensatory renal growth QTL 1	11.8		kidney mass (VT:0002707)	compensatory renal growth score (CMO:0001894)	6	14599473	63457687	Rat
2301972	Bp325	Blood pressure QTL 325	4.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	6	16089372	61967788	Rat
1358190	Ept1	Estrogen-induced pituitary tumorigenesis QTL 1	4.4		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	6	1	44788383	Rat
2293656	Bss28	Bone structure and strength QTL 28	6.79	0.0001	femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	6	3239989	48239989	Rat
1359023	Bp272	Blood pressure QTL 272	2.5		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	6	22288257	32981219	Rat
1354664	Slep2	Serum leptin concentration QTL 2	4.49		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	6	22288257	67288257	Rat
8693690	Alc35	Alcohol consumption QTL 35	2.2	0.606	drinking behavior trait (VT:0001422)	calculated ethanol drink intake rate (CMO:0001615)	6	13717169	27053860	Rat

Markers in Region

D6Rat41

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	6	26,618,314 - 26,618,573 (+)	Marker Load Pipeline
mRatBN7.2	6	20,866,422 - 20,866,681 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	22,042,854 - 22,043,112	NCBI	Rnor6.0
Rnor_5.0	6	31,931,908 - 31,932,166	UniSTS	Rnor5.0
RGSC_v3.4	6	20,798,926 - 20,799,185	RGD	RGSC3.4
RGSC_v3.4	6	20,798,927 - 20,799,185	UniSTS	RGSC3.4
Celera	6	20,425,918 - 20,426,176	UniSTS
RGSC_v3.1	6	20,801,879 - 20,802,138	RGD
RH 2.0 Map	6	184.2	RGD
SHRSP x BN Map	6	20.6398	RGD
FHH x ACI Map	6	20.5099	RGD
Cytogenetic Map	6	q12	UniSTS

D6Rat148

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	20,894,065 - 20,894,315 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	22,070,168 - 22,070,417	NCBI	Rnor6.0
Rnor_5.0	6	31,958,575 - 31,958,824	UniSTS	Rnor5.0
RGSC_v3.4	6	20,826,657 - 20,826,907	RGD	RGSC3.4
RGSC_v3.4	6	20,826,658 - 20,826,907	UniSTS	RGSC3.4
Celera	6	20,454,115 - 20,454,364	UniSTS
RGSC_v3.1	6	20,829,610 - 20,829,860	RGD
RH 2.0 Map	6	159.2	RGD
SHRSP x BN Map	6	20.6398	RGD
Cytogenetic Map	6	q12	UniSTS

RH144401

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	20,845,400 - 20,845,667 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	22,022,797 - 22,023,063	NCBI	Rnor6.0
Rnor_5.0	6	31,911,851 - 31,912,117	UniSTS	Rnor5.0
RGSC_v3.4	6	20,776,957 - 20,777,223	UniSTS	RGSC3.4
Celera	6	20,404,888 - 20,405,154	UniSTS
Cytogenetic Map	6	q12	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001170596	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CB605585	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473947	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000006830 ⟹ ENSRNOP00000006830

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	26,474,843 - 26,668,507 (-)	Ensembl
mRatBN7.2 Ensembl	6	20,722,922 - 20,916,396 (-)	Ensembl
Rnor_6.0 Ensembl	6	21,950,100 - 22,092,346 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000083128 ⟹ ENSRNOP00000070913

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	26,474,843 - 26,668,507 (-)	Ensembl
mRatBN7.2 Ensembl	6	20,722,922 - 20,916,434 (-)	Ensembl
Rnor_6.0 Ensembl	6	21,950,100 - 22,092,346 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000164019 ⟹ ENSRNOP00000109741

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	26,494,610 - 26,668,507 (-)	Ensembl

RefSeq Acc Id:

NM_001170596 ⟹ NP_001164067

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	26,474,843 - 26,668,275 (-)	NCBI
mRatBN7.2	6	20,722,922 - 20,916,396 (-)	NCBI
Rnor_6.0	6	21,900,763 - 22,092,484 (-)	NCBI
Rnor_5.0	6	31,789,563 - 31,980,891 (-)	NCBI
Celera	6	20,282,854 - 20,476,452 (-)	NCBI

Sequence:

show sequence

GGTGCGGCCCTCTTTCCCCTCCCCCGCCAGCCTCGGAGCTCGCTTGGCCTGGCCGGCCCGGCGG
GCGACGTTCCCTGTGCGTGCAGGCGCTTGACTTCACTTCCGGCTAACGCGCTCCGCTTTGCCCC
CTGGCCCCGGATGGTGACTGGCTGTGGTGCTGCACCTCCCGGGACTGTCACTGAGCCGCTTCCC
AGTGTGATTGTGCTGAGCGCAGGCCGGAAGATGGCGGCTGCGGCTGCGGAGGCCTCGGGCCCGA
GCTGCTCCTCCGCGGCGGCGGCGGCAGGGGCGGGGGCGGCCGGGGTCTCCGAGTGGCTGGTGCT
GCGGGATGGCTGCATGCGCTGCGACGCCGACGGGCTGCACAGCCTCTCCTACCACCCAGCGCTT
AACGCCATCCTGGCCGTCACCAGCCGCGGGACCATCAAAGTCATCGATGGCACGTCGGGGGCCA
CCCTTCAGGCCTCGGCGCTCAGCGCTAAACCGGGTGGACAGGTGAAATGTCAGTATATTTCTGC
TGTGGATAAAGTTATATTTGTGGATGATTATGCAGTAGGTTGTAGGAAGGACCTCAATGGGATC
TTGTTGCTAGACACTGCTCTACAAACTCCAGTTTCAAAGCAGGATGATGTGGTTCAGCTTGAAC
TTCCTGTCACAGAGGCACAACAACTCTTATCAGCATGCGTAGAAAAGATAGATGTTTCTAGTAC
AGAGGGTTATGATTTGTTCATCACACAGCTCAAAGATGGTTTAAAAAATACATCTCATGAAACT
GCAGCAAACCATAAAGTTGCTAAGTGGGCCACAGTTACATTTCATCTTCCTCATCATGTATTGA
AGTCTATTGCCAGTGCCATTGTAAATGAACTTAAGAAAATAAATCAAAATGTTGCTGCCTTACC
TGTGGCGTCCTCAGTGATGGACAGATTGTCTTACCTCTTACCCAGTGCACGTCCAGAACTTGGA
GTCGGGCCAGGCCGTTCTGTAGACAGGGCATTGATGTATAGTGAAGCTAACAGAAGGGAGACTT
TCACTTCATGGCCTCACGTTGGCTATAGGTGGGCACAGCCGGATCCCATGGCTCAAGCTGGATT
TTATCACCAGCCTGCTTCCTCTGGAGATGACAGAGCCATGTGTTTTACTTGCAGTGTATGCCTT
GTTTGTTGGGAACCCACGGATGAGCCTTGGTCTGAACACGAGAGACACTCTCCCAACTGCCCCT
TTGTGAAGGGCGAGCACACCCAGAATGTGCCCTTGTCAGTCACACTGGCAACCAGTCCTGCGCA
GCTCCCTTCTGCAGATGGAGCTGACAGAATATCTTGCTTTGGGTCTGGGAGCTGTCCACAGTTT
CTAGCTGCTGCTACCAAACGTGGGAAGATCTGCATATGGGACGTCTCCAAACTCATGAAGGTGC
ACTTGAAGTTTGAGATTAATGCCTACGACCCAGTAATTGTGCAACAGTTGATCCTATCAGGAGA
TCCAAGTTCAGGAGTTGATTCAAGGAGACCTACTTTGGCATGGCTGGAAGATTCTTCTAGTTGC
TCAGATATACCAAAACTGGAAGGAGACAGCGATGATTTACTGGAGGATTCAGACAGCGAAGAGC
ATTCCAGATCAGATTCTGTGACAGGGCACACATCACAGAAGGAAGCCATGGAAGTAAGCCTTGA
TATAACAGCTCTCAGCATTCTCCAGCAGCCAGAAAAACTGCAGTGGGAGATTGTGGCTAATGTG
CTTGAAGACACGGTTAAGGATCTTGAAGAACTTGGGGCGAACCCTTGCTTAACGAACTCTAAGA
GTGAAAAGACAAAGGAAAAGCACCAGGAACAACACAACATTCCCTTCCCATGTTTATTGGCTGG
AGGTTTATTAACATATAAATCTCCTGCTACCTCACCCATTAGTAGTAATTCTCACAGGTCACTG
GATGGTTTAAGCAGAACTCAGGGCGAAAGTATATCAGAACAAGGGTCAACTGACAATGAATCCT
GCACCAACTCAGAACTGAATTCTCCTCTGGTCAGGAGGACTTTACCTGTTTTACTTCTTTATAG
TATCAAAGAATCTGATGAGAAAGCAGGAAAAATCTTTTCACAGATGAACAATATTATGAGTAAA
AGTTTGCACGATGATGGTTTTACCGTTCCACAGATTATTGAAATGGAGCTGGATAACCAGGAGC
AGTTGTTGTTACAGGACCCGCCTGTGACTTACATTCAGCAGTTTGCAGATGCAGCAGCCAGTCT
CACCTCTCCAGATTCCGAGAAGTGGAACTCTGTGTTCCCCAAGCCTGGGACTTTGGTGCAGTGC
TTGAGGCTACCAAAGTTTGCAGAGGAGGAGACTCTTTGTATAGACTCTATAACTCCGTGTGCTG
ACGGAGTCCATTTGTTGGTCGGACTGCGGACATGCTCTGTGGAATCATTGAGTGCAATAAATCA
AGTTGAGGCCTTGAATAATTTAAATAAATTAAACTCTGCACTATGTAATAGACGTAAAGGTGAT
CTGGAATCCAATCTTGCTGTAGTGAATGGTGCAAATATTAGTGTGATCCAACATGAGTCACCAG
CAGATGTACCGGCTCCTTTGATCATTCAGCCGGAACAGAGGAATCTTAGTGGTGGATATTTAGT
TCTTTATAAGATGAATTATACCACTCGAATAGTGACTTTAGAAGAGGAGCCAGTGAAAATCCAA
CATATCAAAGATCCCCAGGACACAATTACCTCGCTCATTTTGCTTCCACCAGACATACTGGATA
ATCGAGAGGATGACTGTGAAGAACCTGCTGAGGAAATGCAGTTGACTTCTAAGAATGGGATTGA
AAGAGAAAAAAAGTCTGACGTTTCTACTCTTGGACACCTGGTAGTAACCACTCAGGGAGGATAC
GTAAAAGTATTAGACCTTTCAAACTTCGAAATTTTGGCCAAAGTGGAGCCTCCCAAAAAGGAGG
GCACTGAAGACCAGGATACATTTGTTTCTGTCATTTACTGCTCAGGCACAGACAGGCTGTGTGC
ATGCACCAAAGGTGGTGAGCTTCATTTTCTCCAAATTGGAGGAACTTGTGATGATATTGATGAA
GCTGATATTCTGGTAGATGGATCCCTTTCTAAAGGAATAGAACCATCTTTAGAAGGTTCCAGAC
CTTTATCAAATCCTTCAAGTCCTGGTATTTCAGGAGTTGATTTATTGGTGGACCAGCCTTTTAC
ACTTGAAATCTTGACGTCTCTAGTAGAGCTAACTCGATTTGAGACACTGACTCCACGATTTTCA
GCAACTGTTCCTCCATGTTGGGTAGAAGTTCAGCAAGAACAGCAGCAAAGAAGGCACCCTCAGC
ATCTGCATCAGCAGCACCATGGAGATGCTGCTCAACACACCCGGACTTGGAAACTGCAGACCGA
CAGCAACAGCTGGGATGAACATGTATTTGAATTGGTTCTACCTAAAGCCTGCATGGTGGGACAT
GTGGACTTCAAATTTGTTCTGAACTCGACCATCACCAGTGTGCCCCAGATACAAGTGAGCCTGC
TGAGGAACAGAGCCCCAGGCCTAGGGAAGGCCAATGCTCTTAACATTGAAGTGGAACAAAATGG
GAACCCGTCCCTGGTTGATTTGAATGAAGAAATGCACCCCATGGATGTAGAGGAGTCACAGTGT
CTTAGGTTATGTCCATTCTTAGAGGATCATAAAGAAGATATTCTGTGTGGCCCAGTATGGCTTG
CTAGTGGTCTTGACCTATCAGGTCATGCTGGGATGTTGACATTGACAAGCCCGAAACTTGTTAA
AGGCATGGCAGGAGGGAAGTACCGTTCGTTTTTAATCCACATCAAAGCAGTGAGTGACCGAGGA
GCAGATGAGGTGTGCAGCAGTGGCCTGCGTCCTGTCGTGAGACTTCCGTCTCTGAAACAGCAGG
GTCACAAGGGATACTCACTGGCTTCCCTCTTGGCAAAGGTTGCAGCAGGCAAGGAAAAGTCATC
TAATGTTAAAAATGAAAGTGCAGGAGGCACTCGTAAGTCTGAAAACCTGCGGGGCTGTGACTTA
CTTCAAGAGGTGTCTGTCACCATTCGGAGATTTAAGAAGACTTCAATTTGTAAGGAAAGGGTTC
AGCGTTGTGCCATGTTACAGTTTTCAGAATTTCATGAGAAGCTTCTTAACACTCTGTGTAGAAG
ATCAGATGATGGGCTGGTCACAGAACACGCTCAGAGTCTTGTGTTGGATACTCTCTGCTGGTTA
GCAGGCGTCCATTCAAATGGACCTGGCAGCTCAAAGGAAGGAAACGAGTGCCTACTTTCAAAAA
CACGAACATGTCTTTCAGATATTGTACGTGTTTGCTTCTTTGAGGCAGGACGAAGTATAGCCCA
TAAATGTGCCCGATTCCTAGCCTTGTGCATTAGTAATGGCAAATGCGACCCCTATCAGCCTGGA
TTTGGATCAGTTCTGTTGAAGGCTTTACTTGACAATATGTGCTTTTTACCTGCAGCAGCAACTG
GTGGGTCTGTCTATTGGTATTTCGTACTGCTGAATTATGTTAAGGATGAAGACTTGGCTGCATG
CAGCACAGCGTGTGCAGCTTTACTCACTGCCGTGTCCAGACAGCTGCAGGACAGGCTAACACCA
CTGGAGGCTCTCCTTCAGACACGATATGGATTATACAGCTCACCATTTGATCCTGTCCTTTTTG
ACTTGGAGATGAGTGGCTCTTCTTGTAAAAATGTGTACAATAGCAGCATCGGTGTCCAGTCAGA
TGAGATTGATTTGTCAGATGTCCTTTCAGGGAATGGAAAAGTCAGTAGCTGCACAGCTGCGGAG
GGAAGTTTCACATCTCTCACTGGACTTCTGGAGGTTGAGCCCCTTCACTTTACTTGCGTGTCAA
CTAGTGATGGAACCAGAATAGAAAGGGATGATGCAATGAGTTCCTTCGGGGTTACTCCTGCAGT
AGGTGGACTATCATCTGGCACAGTTGGGGAAGCCTCGACAGCCCTGAGTTCAGCAGCCCAGGTA
GCTTTGCAGTCTCTCTCTCATGCAATGGCTTCAGCCGAGCAACAGCTACAGGTGCTGCAAGAGA
AACAGCAGCAGCTTTTGAAGCTTCAGCAACAGAAAGCAAAGCTGGAAGCAAAGCTGCACCAGAC
AACAGCAGCAGCAGCAGCAGCCGCATCAGCCGCAGCAGCAGCAGGTCCTGTGCACAACGCTGTG
CCCTCCAACCCAGTGGCTGCTCCTGGATTTTTCATCCATCCGTCTGATGTCATTCCACCCACTC
CAAAAACAACGCCACTTTTTATGACTCCTCCTCTCACTCCGCCCAATGAAGCCGTGTCCGTTGT
GATTAATGCTGAGCTTGCACAGCTTTTCCCAGGCTCCGTCATTGATCCTCCAGCAGTGAACCTT
GCTGCACACAACAAAAATGCCAACAAGTCGAGAATGAATCCACTTGGTTCTGGTCTGGCCCTTG
CAATTTCTCATGCCTCACATTTTCTCCAGCCGCCACCTCACCAGTCCATTATTATAGAGCGAAT
GCATTCAGGAGCCAGGAGATTTGTGACCCTGGATTTTGGAAGACCTATACTGCTGACAGATGTA
CTGATTCCTACATGTGGAGACCTGGCGTCCTTATCAATTGACATATGGACATTAGGAGAGGAAG
TGGATGGAAGGCGTTTGGTAGTGGCAACTGATATAAGCACACACTCATTAATTCTTCATGACCT
AATCCCTCCACCTGTGTGCAGATTTATGAAGATCACCGTCATTGGACGTTATGGAAGCACAAAT
GCTAGAGCAAAGATTCCGTTAGGATTTTACTACGGGCATACCTATATCTTACCGTGGGAAAGTG
AACTGAAGTTGATGCATGACCCGCTGAGAGGTGAAGGAGAATCTGCCAACCAGCCAGAAATTGA
CCAGCATTTAGCAATGATGGTTGCTCTACAAGAAGATATACAGTGCAGATATAACTTAGCCTGT
CATCGTCTGGAAGCTCTTTTGCAGAGTATTGATCTTCCTCCTCTCAATAGTGCGAACAATGCAC
AGTACTTTTTGCGAAAACCAGACAAAGCAGTTGAGGAAGACAGTAGAGTTTTTTCTGCTTATCA
AGATTGTATTCAGCTACAGCTTCAACTAAATCTGGCTCATAATGCAGTGCAGAGGCTCAAAGTA
GCCATAGGTGCAAGTCGGAAGACGTTGAGTGAAACATCAGGTCCAGAAGACCTGATTCCGACGT
CGTCCACAGAGCAGTTGCGCACCATTGTGAGGTACTTACTGGACACGCTGCTCAGCCTTCTGCA
CTCTTCCAATGGGCATTCTGTTCCTGCAGTTTTGCAGAGTACCTTTCACGCTCAGGCCTGTGAA
GAACTGTTTAAACATTTGTGCATCAGTGGGACCCCAAAGATAAGGCTGCATACTGGCCTTCTCC
TTGTTCAGCTGTGTGGTGGTGAGAGATGGTGGGGCCAGTTTCTTTCTAACGTTCTTCAAGAGCT
GTATAATTCAGAGCAGCTTCTCATCTTCCCACAAGATAGGGTTTTTATGTTACTCTCCTGCATT
GGTCAGCGATCACTTAGTAACAGTGGAGTATTGGAAAGCTTACTTAATCTCTTGGATAATTTAT
TGTCACCTCTTCAACCAGAGTTAACCATGCACAGAAGGACAGAAGGAGTCCTGGATATCCCCAT
GATCAGTTGGGTTGTTATGCTGGTGTCCAGGTTACTGGATTACGTGGCCACAGTTGAAGATGAA
GCAGCAGCTGCAAAGAAACCTTTGAATGGTAACCAGTGGAGTTTTATTAACAATAATCTGCATA
CTCAGAGCTTAAACAGATCCTCCAAGGGAGGCAGTAGCCTCGATAGATTATATTCCAGAAAGAT
CCGAAAGCAGCTTGTCCATCATAAACAGCAACTTAACCTACTAAAGGCAAAACAGAAGGCTTTG
GTGGAACAGATGGAAAAAGAAAAAATACAGAGTAACAAAGGCTCATCATATAAACTGCTAGTAG
AGCAAGCCAAGCTGAAGCAGGCGACCTCCAAGCATTTTAAGGATTTGATTCGCTTGCGCCGGAC
AGCAGAATGGTCTCGTTCTAATTTAGACACTGAAGTTACAACAACAAAGGAGAGCCCCGAGATT
GAACCTCTTCCATTTACTCTGGCCCATGACCGTTGTATCTCAGTTGTGCAAAAGCTTGTCCTGT
TCCTCCTCTCCATGGATTTCACATGCCATGCAGACCTCCTACTGTTTGTCTGCAAGGTTCTTGC
ACGCATTGCAAATGCGACCAGGCCAACCATTCATTTGTGTGAGATTGTGAATGAGCCGCAGCTA
GAAAGACTGTTGTTGCTTCTGGTTGGAACTGACTTCAACAGAGGAGACATCTCTTGGGGTGGCG
CCTGGGCTCAGTACTCTTTAACCTGTATGCTGCAGGACATTCTAGCAGGAGAACTGTTGGCTCC
AGTAGCCGCGGAAGCGATGGAAGAAGGCACAGTGAGTGATGATGTCGGGGCAACAGCTGGCGAC
TCTGATGACTCTCTCCAGCAGTCTTCTGTTCAGCTGCTGGAAACCATAGATGAACCTTTGACAC
ACGAGATAGCAGGTACACCTCCTCTCTCTTCTTTGGAAAAAGATAAGGAAATTGACCTTGAGCT
ACTTCAAGATCTGATGGAAGCTGACATTGACCCTTTAGATATTGATTTAGAAAAGGATCCTCTT
GCAGCCAAGGTTTTTAAGCCTATAAGCAGTACATGGTATGACTACTGGGGTGCCGATTATGGTA
CCTATAATTATAATCCTTACATTGGAGGCCTGGGGATGCCTGTAGCAAAACCACCGTCAAACAC
AGAGAAGAATGGATCCCAGACTGTCAGTGTTTCAGTATCTCAGGCTTTAGATGCTCGCCTGGAG
GTTGGCCTTGAGCAGCAAGCAGAGCTTATGCTGAAAATGATGTCTACCCTGGAAGCGGACTCCA
TCTTACAAGCACTGACGAGTACGCCTCCCACCTTTTCACAATCTCCAAGTGGAACGGATGATTC
ACTTCTAGGGAGTTTACAACCAGCCAACCAGAATAGCCAGCTCATAATACAGTTGTCATCTGTC
CCAATGTTAAATGTTTGTTTCAATAAACTGTTTTCCATGCTTCAAGTCCATCATGTTCAGTTGG
AATCACTTCTTCAGTTGTGGCTCACATTGAGCCTTAATTCTAGTTCATCAGGGAACAAAGAGAA
TGGAGCAGATATTTTTTTATACAATGCTAATCGGATACCTGTCATCTCATTAAATCAAGCATCA
ATTACTAGCTTTCTCACAGTGCTAGCTTGGTATCCAAATACTTTGCTCCGGACGTGGTGCCTTG
TGCTTCATAGCCTAACACTCATGACGAATATGCAGCTTAATTCTGGTTCCAGCAGTTCTATTGG
AGCTCAAGAGACTACGGCTCATTTGTTGGTTTCAGATCCAAACCTTATTCATGTGTTAGTGAAA
TTTCTTTCTGGTACCAGTCCACATGGGACAAATCAGCACAGCCCACAGGTTGGTCCAACAGCCA
CACAAGCTATGCAAGAATTTCTCACCCGACTACAAGTGCATCTGTCTTCAACTTGTCCTCAGAT
ATTCAGTGAACTTTTGCTCAAGTTAATTCACATACTGTCCACGGAAAGGGGGGCCTTCCAGACA
GGTCAAGGACCGCTTGATGCCCAAGTGAAGCTGTTAGAGTTTACTCTGGAACAGAACTTTGAAG
TCGTCTCAGTTAGTACGATTTCTGCTGTGATAGAGTCTGTCACCTTTCTGGTGCATCACTACAT
CACTTGCTCAGACAAAGTCATGTCTAGAAGTGGATCAGATAGCTCTGTTGGTGCTCGAGCTTGC
TTTGGGGGACTCTTTGCTAACCTCATTCGTCCAGGTGATGCAAAAGCTGTTTGTGGTGAAATGA
CAAGAGATCAACTCATGTTTGATTTGTTAAAACTTGTTAACATTTTAGTACAGCTGCCTCTTTC
AAGCAACAGGGAATACAGCGCAAGAGTGTCCATGACCACCAATACCACAGATAGTGTTTCAGAT
GAAGAAAAAGTCTCAGGAGGCAAAGACGTCAACGGAAGCAATACCAGCATCCCAGGATCTCCTG
CCTATGTTGCTGACTTGGTCTTAGCCAACCAGCAGATTATGAGCCAGATTTTGTCTGCTCTAGG
CCTGTGTAATAGCAGTGCCATGGCAATGATAATTGGTGCAAGTGGCTTACATCTCACCAAACAT
GAAAACTTTCATGGTGGGTTAGATGCCATATCAGTTGGAGATGGATTATTTACTATATTGACAA
CACTCAGTAAGAAAGCCTCTACAGTTCACATGATGTTGCAGCCAATCTTGACCTACATGGCCTG
TGGATACATGGGCAGACAAGGCTCTCTTGCTACTTGCCAGTTATCTGAACCACTGTTGTGGTTT
ATTTTGAGAGTGTTGGATACTAGTGATGCATTGAAAGCATTCCATGATATGGGTGGAGTTCAGT
TAATCTGCAACAATATGGTTACCAGTACAAGGGCTATTGTGAACACTGCGAGAAGTATGGTGTC
AACTATTATGAAATTTCTTGATTCTGGTCCAAACAAAGCCGTGGACAGCACTTTGAAGACGAGA
ATCTTGGCCTCTGAGCCCGACAATGCAGAAGGAATCCATAACTTTGCACCCCTTGGTACAATCA
CCTCTAGTAGTCCTACTGCCCAGCCAGCTGAGGTGCTCTTGCAAGCCACACCGCCCCATCGAAG
GGCTCGTTCTGCTGCGTGGTCCTATATCTTTCTGCCAGAGGAAGCTTGGTGTGACCTTACCATC
CACCTTCCTTCAGCAGTGTTGCTGAAGGAGATACATATTCAGCCTCACCTTGCATCGCTTGCCA
CCTGCCCATCGTCAGTGTCCGTTGAAGTAAGTGCAGATGGTGTTAATATGCTCCCTTTGTCTAC
TCCTGTTGTCACAAGTGGTCTCACCTACATAAAAATACAGCTTGTGAAAGCTGAGGTAGCTTCT
GCTGTCTGCCTCAGACTACATCGTCCTCGGGATGCCAGCACACTAGGCCTTTCACAGATTAAAT
TATTAGGCCTTACTGCTTTTGGTACCACCTCATCAGCCACAGTTAATAATCCCTTCCTTCCATC
TGAAGATCAAGTTTCCAAAACAAGCATTGGATGGCTACGGTTATTGCATCATTGCCTTACACAC
ATAAGTGATCTAGAAGGGATGATGGCCAGTGCGGCTGCCCCTACTGCCAATTTGCTACAGACTT
GTGCTGCCTTACTGATGTCCCCATACTGTGGGATGCATTCCCCCAACATTGAGGTTGTGCTTGT
AAAGATCGGATTGCAGTCCACTAGAATTGGCCTGAAGCTTATTGACATTCTCCTGAGAAACTGT
GCAGCATCAGGCAGTGACCCTACAGATTTAAATAGCCCTTTACTTTTTGGAAGACTGAATGGAC
TTTCCTCTGATTCTACAATAGATATTCTTTACCAGCTTGGTACAACTCAGGACCCTGGAACTAA
AGACAGAATTCAGGCCTTGCTAAAGTGGGTCAGTGACTCTGCAAAAATGGCTGCTTTGAAGAGA
AGTGGCAGAATGAACTATATGTGCCCGAGCTCATCAGCTGTCGAGTATGGGCTTCTCATGCCGT
CCCCCTCTCATTTGCACTGTGTAGCTGCGATTCTTTGGCACAGTTATGAATTGCTTGTAGAGTA
TGACTTGCCAGCACTGCTAGACCGAGAGCTCTTTGAGTTACTTTTCAATTGGTCCATGTCACTT
CCGTGCAATGTGGTTTTGAAGAAAGCTGTTGACAGTCTACTTTGCTCCATGTGTCATATACATC
CAAATTATTTTTCCTTGCTCATGGGCTGGATGGGAATTATCCCTCCCCCAGTGCAATGTCATCA
TAGACTGTCCATGACAGATGATAGCAAGAAACAAGATCTTAGTTCATCACTGACAGATGATTCC
AAAAATGCACAAGCACCTCTTGCTCTAACTGAATCCCACTTGGCAACTCTTGCTTCCTCTTCTC
AGTCCCCAGAAGCTATTAAACAGTTGCTAGACTCAGGGTTGCCTTCCCTTCTTGTGAGGAGTCT
GGCTAGTTTTTGTTTTAGTCATATTTCCTACTCAGAAAGCATTGCTCAGTCAATAGATAATTCC
CAGGACAAACTCAGGCGGCATCATGTTCCACAGCATTGTAATAAGATGCCCATCACAGCAGACC
TAGTTGCTCCTATTCTTAGGTTTTTGACTGAAGTTGGCAATAGTCATATTATGAAAGATTGGCT
TGGTGGTTCTGAAGTCAATCCACTGTGGACAGCACTTCTGTTCTTACTGTGTCACTCTGGGTCT
ACTGCTGGAGGACATAATTTAGGGGCACAGCAGAGCAGCACAAGATCAGCTTCTCATTCTTCAG
CTGCTACGACAGTACTGACTACCCAGCAACGGACAGCCATTGAGAACGCGACTGTTGCCTTCTT
TCTGCAGTGTATTTCATGTCACCCTAATAACCAAAAGCTGATGGCCCAGGTTCTCTGTGAACTA
TTTCAGACAGCTCCTCAAAGGGGTAGCCTTCCAACTTCTGGGAACATTTCAGGGTTTGTACGAA
GACTGTTTCTACAGTTGATGCTAGAGGATGAGAAGGTGACAATGTTTCTTCAGTCACCTTGCCC
ATTATACAAAGGGAGGATTAATGCGACCAGCCATGTCATCCAACACCCAATGTTTGGAGCAGGC
CATAAGTTCCGTACTCTGCATTTGCCAGTCTCGACAACCCTGTCAGATGTTCTCGATAGAGTGT
CAGATACACCAAGTATCACAGCTAAACTTATTAGTGAGCAAAAAGATGATAAAGAAAAGAAGAA
CCATGAAGAGAAAGAAAAAGTTAAGGCGGACAATGGATTTCAGGATAACTACAGTGTTGTCGTT
GCCTCTGGGCTGAAATCACAGTCTAAACGTGCTGTGTCATCTACACCACCTCGCCCACCATCCA
GGAGGGGAAGAGCAATTCCTGATAAAATAGGGAGTACGTCCTCAAGTGCAGACACTGCTAACAA
AATCATCACCGTCCCTGTGTTTCATCTGTTTCACAGACTCTTGGCAGGTCAGCCATTGCCAGCA
GAAATGACACTTGCCCAGCTTTTAACTCTCCTTTATGACCGAAAACTTCCTCAAGGTTACCGTT
CAATAGATCTTACTGTTAAATTGGGATCAAAAGTCATTACAGATCCAAGTTTGTCAAAAACAGA
TTCTTTCAAAAGACTACACCCTGAAAAAGATCATGGAGAGTTAATTGGTAGCTGTCCAGAAGAT
GAGGCTCTTACTCCGAGCGATGAGTGCATGGATGGAGTATTGGATGAGTCTTTGCTGGAAACCT
GTCCCATTCAGTCACCATTACAGGTTTTTGCAGGAATGGGTGGACTGGCTCTTATTGCAGAGAG
ATTGCCCATGCTCTATCCAGAAGTGATTCAGCAGGTGAGTGCTCCAGTGGTAGCATCCACCACT
CAGGAAAAGCCAAAGGATAGTGATCAGTTTGAATGGGTGACCATAGAACAATCAGGCGAACTGG
TTTATGAAGCTCCAGAAACTATTGCAGCCGAGCCTCCCCCTGTTAAGTCAGCGGTGCAAGCCAC
TTCTCCCATACCTGCCCATTCTTTGGCTGCTTTTGGATTATTTCTTCGTCTTCCGGGCTATGCC
GAAGTGCTCCTGAAAGAGAGAAAACACGCCCAGTGCCTTCTTCGATTGGTATTGGGAGTTACAG
ATGATGGAGAAGGCAGTCACATTCTGCAATCTCCATCAGCCAATGTGCTTCCAACCCTTCCTTT
CCACGTTCTTCGCAGCTTGTTTAGTGCTACTCCCTTGACGACTGATGACGGTGTGCTTCTGCGT
CGGATGGCATTGGAAATTGGAGCATTGCACCTAATTCTTGTCTGTCTCTCAGCTCTGAGCCATC
ATGCACCACGAGTTCCAAACTCTAGCCTTAACCAAACTGAGCCACAGGTGTCAAATTCTCATAA
CCCTACGTCAACAGAAGAACAGCAGCTGTATTGGGCCAAAGGAACTGGCTTTGGTACTGGTTCT
ACAGCATCAGGATGGGATGTGGAACAAGCCTTAACCAAACAGAGGCTAGAAGAGGAGCATGTGA
CCTGTCTTTTACAGGTTCTTGCGAGCTACATAAACCCCATGAGCAGCGCTGTAAATGGGGAAGC
CCAGGTCTCTCCTGAGAGCCGCGCGCAGAACAGCAGTGCTCTGCCCTCTGTGCTTCTGGAGCTT
CTCAGTCAGTCGTGCCTCATCCCGGCCATGTCCTCCTACCTACGCAATGACTCTGTTCTGGACA
TGGCAAGACATGTGCCACTCTATCGAGCTCTGCTAGAATTGCTCCGGGCCATTGCTTCTTGTAC
ATCTATGGTGCCGCTGTTGTTGCCTCTTTCTACAGAGAATGGGGAAGAAGAGGAAGAAGAACAG
TCAGAATGTCAGACTTCTGTTGGTACATTATTAGCCAAAATGAAGACCTGTGTCGATACCTACA
CCAACCGCCTAAGATCTAAAAGGGAAAATATTAAAACAGGAGTCAAGCCAGATGCACCTGATCA
AGAACCAGAAGGACTTACTCTTCTGGTCCCAGACATCCAGCGGACCGCTGAGATCGTCCACGCA
GCCACCACCAATCTGCGACAAGCAAATCAAGAAAAAAAACTAGGTGAATATTCAAAGAAGGTGG
CTATGAAACCCAAACCTCTGTCAGTATTAAAATCACTTGAAGAGAAGTATGTGGCTGTCATGAA
AACATTGCAGTTTGATACATTTGAAATGGTTTCTGAAGATGACGATGGGAAATTGGGTTTTAAA
GTAAATTACCACTACATGTCTCAGGTGAAAAATGCCAATGATGCCAACAGTGCTGCCAGAGCCC
GCCGCCTGGCTCAGGAGGCGGTGACACTCTCAACCTCGCTGCCTCTGTCATCGTCTTCCAGTGT
CTTTGTGCGCTGCGATGAGGAGCGACTTGACATCATGAAGGTTCTGATAACTGGGCCAGCGGAC
ACCCCCTATGCAAATGGCTGCTTTGAGTTTGATGTATATTTTCCTCAGGATTATCCTAGCTCAC
CTCCTCTTGTGAACCTAGAAACCACTGGGGGTCATAGCGTGCGCTTCAATCCCAACCTTTACAA
TGATGGCAAGGTTTGTTTAAGCATCCTGAATACGTGGCATGGAAGACCAGAAGAGAAGTGGAAT
CCTCAGACATCAAGTTTTTTGCAAGTGTTGGTTTCTGTCCAGTCCCTTATATTAGTAGCTGAGC
CTTACTTCAATGAACCAGGATATGAACGGTCTAGAGGCACTCCCAGTGGCACACAGAGCTCTCG
AGAATACGATGGAAACATCCGACAAGCAACGGTTAAATGGGCAATGCTAGAACAAATCAGAAAC
CCTTCACCGTGCTTTAAAGAAGTCATACACAAGCACTTCTACTTGAAGAGAGTTGAGGTCATGG
CCCAGTGTGAGGAGTGGATTGCAGACATTCAGCAGTACAGCAGTGACAAGCGGGTGGGCAGGAC
CATGTCGCACCACGCAGCAGCTCTCAAGCGCCACACTGCTCAGCTCCGAGAAGAGCTACTGAAA
CTTCCTTGCCCTCAAGGCTTAGATCCAGACATTGAAGATGCCTCACCCGTGTGCAGGGCCACAG
CGGGTGCTGAAGAGACTCTAACACACGACCATGTCAAACCCAGCAGCAGCAAAGACATCCCCAG
TGACTTCCAATTATGAGCTGCATTGATGTGGATTTCGTAGACACACAGGCTTCGAAGCACAAGC
CAAATATGTCAATATTTGTATGTAAGAAACTAATTATGTAATAGGTAATGAAACTGAAACTATA
CTATGCCCTTAAGGAGATCCAGTTTAATTCAAGGTGATCTTTGATTTACCTGTACAAGAGTGTA
AACTTTTTTGTGCTTTTATTTTTCAATTGTGAGAACCACTGATTGGTATGTTCAACAAATTTGT
GTATACAAAGAAATGGATAAATCACTGATCTATAAGGGAAACTACCTTAGGAAAGAATGTTTAC
TGAATGTTTATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTGTAGAGTGAGAGGTTGTT
AACAAAGAATATATATTGGTCATTCTTACAACTACTATTTAAAGTCAGCAACTTTTCACTGAAT
TTGATAGATTTTATGTTTGGCCATATCTTCATGCTCATATTTGATTTCTGAAGACTTCCTACAT
ACACTTTAATAAAAGTTAAACAGACATAGCCCCTCTTTTTTGATTTACTGGTACATTTTTAAGT
AATAAATCTGCCATAAAATGCACTATAGCTGGAGACTTGCACTTGTATGGATGAATTTATTACA
TTCAACATATTTAATTTTATGCCTTCTAAGATGCAGAAAAAAAATAAATGAACATGATTTTATT
CTATGCCAAACATTTGGGCCTCTGAATGTATCCATTATTTGAATTTATTATATGAAAAGTTATG
GTCAATTGAAAAAGTCGATTTAAACTGTTTTCCTCAAGGGCTCCTCTTTTTCCTGGACTGTGTG
GTTTTGTTCCTGAAGTAGTCACATGTATGTATCAACACGAGGCTCTGTCGGAGAGAGGCTGGGC
CTCTCTGGTGCTGTCACAGTCCGCTCTGTACCTGCCACACAGGCTCATTTTCATGCAAACTCTT
CCTAGAGCCAATAAATAAAAACTTAGGTGAATTAGTA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001164067	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM02832	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000006830.8
	ENSRNOP00000070913
	ENSRNOP00000070913.2
	ENSRNOP00000109741.1

RefSeq Acc Id:

NP_001164067 ⟸ NM_001170596

- UniProtKB:

A6H9X7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MVTGCGAAPPGTVTEPLPSVIVLSAGRKMAAAAAEASGPSCSSAAAAAGAGAAGVSEWLVLRDG
CMRCDADGLHSLSYHPALNAILAVTSRGTIKVIDGTSGATLQASALSAKPGGQVKCQYISAVDK
VIFVDDYAVGCRKDLNGILLLDTALQTPVSKQDDVVQLELPVTEAQQLLSACVEKIDVSSTEGY
DLFITQLKDGLKNTSHETAANHKVAKWATVTFHLPHHVLKSIASAIVNELKKINQNVAALPVAS
SVMDRLSYLLPSARPELGVGPGRSVDRALMYSEANRRETFTSWPHVGYRWAQPDPMAQAGFYHQ
PASSGDDRAMCFTCSVCLVCWEPTDEPWSEHERHSPNCPFVKGEHTQNVPLSVTLATSPAQLPS
ADGADRISCFGSGSCPQFLAAATKRGKICIWDVSKLMKVHLKFEINAYDPVIVQQLILSGDPSS
GVDSRRPTLAWLEDSSSCSDIPKLEGDSDDLLEDSDSEEHSRSDSVTGHTSQKEAMEVSLDITA
LSILQQPEKLQWEIVANVLEDTVKDLEELGANPCLTNSKSEKTKEKHQEQHNIPFPCLLAGGLL
TYKSPATSPISSNSHRSLDGLSRTQGESISEQGSTDNESCTNSELNSPLVRRTLPVLLLYSIKE
SDEKAGKIFSQMNNIMSKSLHDDGFTVPQIIEMELDNQEQLLLQDPPVTYIQQFADAAASLTSP
DSEKWNSVFPKPGTLVQCLRLPKFAEEETLCIDSITPCADGVHLLVGLRTCSVESLSAINQVEA
LNNLNKLNSALCNRRKGDLESNLAVVNGANISVIQHESPADVPAPLIIQPEQRNLSGGYLVLYK
MNYTTRIVTLEEEPVKIQHIKDPQDTITSLILLPPDILDNREDDCEEPAEEMQLTSKNGIEREK
KSDVSTLGHLVVTTQGGYVKVLDLSNFEILAKVEPPKKEGTEDQDTFVSVIYCSGTDRLCACTK
GGELHFLQIGGTCDDIDEADILVDGSLSKGIEPSLEGSRPLSNPSSPGISGVDLLVDQPFTLEI
LTSLVELTRFETLTPRFSATVPPCWVEVQQEQQQRRHPQHLHQQHHGDAAQHTRTWKLQTDSNS
WDEHVFELVLPKACMVGHVDFKFVLNSTITSVPQIQVSLLRNRAPGLGKANALNIEVEQNGNPS
LVDLNEEMHPMDVEESQCLRLCPFLEDHKEDILCGPVWLASGLDLSGHAGMLTLTSPKLVKGMA
GGKYRSFLIHIKAVSDRGADEVCSSGLRPVVRLPSLKQQGHKGYSLASLLAKVAAGKEKSSNVK
NESAGGTRKSENLRGCDLLQEVSVTIRRFKKTSICKERVQRCAMLQFSEFHEKLLNTLCRRSDD
GLVTEHAQSLVLDTLCWLAGVHSNGPGSSKEGNECLLSKTRTCLSDIVRVCFFEAGRSIAHKCA
RFLALCISNGKCDPYQPGFGSVLLKALLDNMCFLPAAATGGSVYWYFVLLNYVKDEDLAACSTA
CAALLTAVSRQLQDRLTPLEALLQTRYGLYSSPFDPVLFDLEMSGSSCKNVYNSSIGVQSDEID
LSDVLSGNGKVSSCTAAEGSFTSLTGLLEVEPLHFTCVSTSDGTRIERDDAMSSFGVTPAVGGL
SSGTVGEASTALSSAAQVALQSLSHAMASAEQQLQVLQEKQQQLLKLQQQKAKLEAKLHQTTAA
AAAAASAAAAAGPVHNAVPSNPVAAPGFFIHPSDVIPPTPKTTPLFMTPPLTPPNEAVSVVINA
ELAQLFPGSVIDPPAVNLAAHNKNANKSRMNPLGSGLALAISHASHFLQPPPHQSIIIERMHSG
ARRFVTLDFGRPILLTDVLIPTCGDLASLSIDIWTLGEEVDGRRLVVATDISTHSLILHDLIPP
PVCRFMKITVIGRYGSTNARAKIPLGFYYGHTYILPWESELKLMHDPLRGEGESANQPEIDQHL
AMMVALQEDIQCRYNLACHRLEALLQSIDLPPLNSANNAQYFLRKPDKAVEEDSRVFSAYQDCI
QLQLQLNLAHNAVQRLKVAIGASRKTLSETSGPEDLIPTSSTEQLRTIVRYLLDTLLSLLHSSN
GHSVPAVLQSTFHAQACEELFKHLCISGTPKIRLHTGLLLVQLCGGERWWGQFLSNVLQELYNS
EQLLIFPQDRVFMLLSCIGQRSLSNSGVLESLLNLLDNLLSPLQPELTMHRRTEGVLDIPMISW
VVMLVSRLLDYVATVEDEAAAAKKPLNGNQWSFINNNLHTQSLNRSSKGGSSLDRLYSRKIRKQ
LVHHKQQLNLLKAKQKALVEQMEKEKIQSNKGSSYKLLVEQAKLKQATSKHFKDLIRLRRTAEW
SRSNLDTEVTTTKESPEIEPLPFTLAHDRCISVVQKLVLFLLSMDFTCHADLLLFVCKVLARIA
NATRPTIHLCEIVNEPQLERLLLLLVGTDFNRGDISWGGAWAQYSLTCMLQDILAGELLAPVAA
EAMEEGTVSDDVGATAGDSDDSLQQSSVQLLETIDEPLTHEIAGTPPLSSLEKDKEIDLELLQD
LMEADIDPLDIDLEKDPLAAKVFKPISSTWYDYWGADYGTYNYNPYIGGLGMPVAKPPSNTEKN
GSQTVSVSVSQALDARLEVGLEQQAELMLKMMSTLEADSILQALTSTPPTFSQSPSGTDDSLLG
SLQPANQNSQLIIQLSSVPMLNVCFNKLFSMLQVHHVQLESLLQLWLTLSLNSSSSGNKENGAD
IFLYNANRIPVISLNQASITSFLTVLAWYPNTLLRTWCLVLHSLTLMTNMQLNSGSSSSIGAQE
TTAHLLVSDPNLIHVLVKFLSGTSPHGTNQHSPQVGPTATQAMQEFLTRLQVHLSSTCPQIFSE
LLLKLIHILSTERGAFQTGQGPLDAQVKLLEFTLEQNFEVVSVSTISAVIESVTFLVHHYITCS
DKVMSRSGSDSSVGARACFGGLFANLIRPGDAKAVCGEMTRDQLMFDLLKLVNILVQLPLSSNR
EYSARVSMTTNTTDSVSDEEKVSGGKDVNGSNTSIPGSPAYVADLVLANQQIMSQILSALGLCN
SSAMAMIIGASGLHLTKHENFHGGLDAISVGDGLFTILTTLSKKASTVHMMLQPILTYMACGYM
GRQGSLATCQLSEPLLWFILRVLDTSDALKAFHDMGGVQLICNNMVTSTRAIVNTARSMVSTIM
KFLDSGPNKAVDSTLKTRILASEPDNAEGIHNFAPLGTITSSSPTAQPAEVLLQATPPHRRARS
AAWSYIFLPEEAWCDLTIHLPSAVLLKEIHIQPHLASLATCPSSVSVEVSADGVNMLPLSTPVV
TSGLTYIKIQLVKAEVASAVCLRLHRPRDASTLGLSQIKLLGLTAFGTTSSATVNNPFLPSEDQ
VSKTSIGWLRLLHHCLTHISDLEGMMASAAAPTANLLQTCAALLMSPYCGMHSPNIEVVLVKIG
LQSTRIGLKLIDILLRNCAASGSDPTDLNSPLLFGRLNGLSSDSTIDILYQLGTTQDPGTKDRI
QALLKWVSDSAKMAALKRSGRMNYMCPSSSAVEYGLLMPSPSHLHCVAAILWHSYELLVEYDLP
ALLDRELFELLFNWSMSLPCNVVLKKAVDSLLCSMCHIHPNYFSLLMGWMGIIPPPVQCHHRLS
MTDDSKKQDLSSSLTDDSKNAQAPLALTESHLATLASSSQSPEAIKQLLDSGLPSLLVRSLASF
CFSHISYSESIAQSIDNSQDKLRRHHVPQHCNKMPITADLVAPILRFLTEVGNSHIMKDWLGGS
EVNPLWTALLFLLCHSGSTAGGHNLGAQQSSTRSASHSSAATTVLTTQQRTAIENATVAFFLQC
ISCHPNNQKLMAQVLCELFQTAPQRGSLPTSGNISGFVRRLFLQLMLEDEKVTMFLQSPCPLYK
GRINATSHVIQHPMFGAGHKFRTLHLPVSTTLSDVLDRVSDTPSITAKLISEQKDDKEKKNHEE
KEKVKADNGFQDNYSVVVASGLKSQSKRAVSSTPPRPPSRRGRAIPDKIGSTSSSADTANKIIT
VPVFHLFHRLLAGQPLPAEMTLAQLLTLLYDRKLPQGYRSIDLTVKLGSKVITDPSLSKTDSFK
RLHPEKDHGELIGSCPEDEALTPSDECMDGVLDESLLETCPIQSPLQVFAGMGGLALIAERLPM
LYPEVIQQVSAPVVASTTQEKPKDSDQFEWVTIEQSGELVYEAPETIAAEPPPVKSAVQATSPI
PAHSLAAFGLFLRLPGYAEVLLKERKHAQCLLRLVLGVTDDGEGSHILQSPSANVLPTLPFHVL
RSLFSATPLTTDDGVLLRRMALEIGALHLILVCLSALSHHAPRVPNSSLNQTEPQVSNSHNPTS
TEEQQLYWAKGTGFGTGSTASGWDVEQALTKQRLEEEHVTCLLQVLASYINPMSSAVNGEAQVS
PESRAQNSSALPSVLLELLSQSCLIPAMSSYLRNDSVLDMARHVPLYRALLELLRAIASCTSMV
PLLLPLSTENGEEEEEEQSECQTSVGTLLAKMKTCVDTYTNRLRSKRENIKTGVKPDAPDQEPE
GLTLLVPDIQRTAEIVHAATTNLRQANQEKKLGEYSKKVAMKPKPLSVLKSLEEKYVAVMKTLQ
FDTFEMVSEDDDGKLGFKVNYHYMSQVKNANDANSAARARRLAQEAVTLSTSLPLSSSSSVFVR
CDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGK
VCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYD
GNIRQATVKWAMLEQIRNPSPCFKEVIHKHFYLKRVEVMAQCEEWIADIQQYSSDKRVGRTMSH
HAAALKRHTAQLREELLKLPCPQGLDPDIEDASPVCRATAGAEETLTHDHVKPSSSKDIPSDFQ
L

hide sequence

Ensembl Acc Id:

ENSRNOP00000006830 ⟸ ENSRNOT00000006830

Ensembl Acc Id:

ENSRNOP00000070913 ⟸ ENSRNOT00000083128

Ensembl Acc Id:

ENSRNOP00000109741 ⟸ ENSRNOT00000164019

Protein Domains

UBC core

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13694409

Promoter ID:

EPDNEW_R4934

Type:

initiation region

Name:

Birc6_1

Description:

baculoviral IAP repeat-containing 6

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	6	22,092,292 - 22,092,352	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307247	AgrOrtholog
BioCyc Gene	G2FUF-38450	BioCyc
Ensembl Genes	ENSRNOG00000027191	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000006830.9	UniProtKB/TrEMBL
	ENSRNOT00000083128	ENTREZGENE
	ENSRNOT00000083128.3	UniProtKB/TrEMBL
	ENSRNOT00000164019.1	UniProtKB/TrEMBL
Gene3D-CATH	3.10.110.10	UniProtKB/TrEMBL
	Inhibitor Of Apoptosis Protein (2mihbC-IAP-1), Chain A	UniProtKB/TrEMBL
InterPro	BIR	UniProtKB/TrEMBL
	DUF3643	UniProtKB/TrEMBL
	UBQ-conjugat_E2	UniProtKB/TrEMBL
	UBQ-conjugating_enzyme/RWD	UniProtKB/TrEMBL
NCBI Gene	313876	ENTREZGENE
PANTHER	(E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME	UniProtKB/TrEMBL
	BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 6	UniProtKB/TrEMBL
Pfam	BIR	UniProtKB/TrEMBL
	DUF3643	UniProtKB/TrEMBL
	UQ_con	UniProtKB/TrEMBL
PhenoGen	Birc6	PhenoGen
PROSITE	BIR_REPEAT_2	UniProtKB/TrEMBL
	UBC_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000027191	RatGTEx
SMART	BIR	UniProtKB/TrEMBL
	UBCc	UniProtKB/TrEMBL
Superfamily-SCOP	Inhibitor of apoptosis (IAP) repeat	UniProtKB/TrEMBL
	SSF54495	UniProtKB/TrEMBL
UniProt	A0A0G2JZ53_RAT	UniProtKB/TrEMBL
	A0ABK0LU64_RAT	UniProtKB/TrEMBL
	A6H9X7	ENTREZGENE, UniProtKB/TrEMBL
	F1LY70_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Birc6	baculoviral IAP repeat-containing 6	Birc6_predicted	baculoviral IAP repeat-containing 6 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Birc6_predicted	baculoviral IAP repeat-containing 6 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - KEGG (archival)

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - KEGG (archival)