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Gene: Rnf44 (ring finger protein 44) Rattus norvegicus

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Symbol:

Rnf44

Name:

ring finger protein 44

RGD ID:

1307212

Description:

Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in protein ubiquitination. Orthologous to human RNF44 (ring finger protein 44); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; acetamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC361212

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RNF44 (ring finger protein 44)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Rnf44 (ring finger protein 44)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rnf44 (ring finger protein 44)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RNF44 (ring finger protein 44)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RNF44 (ring finger protein 44)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rnf44 (ring finger protein 44)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RNF44 (ring finger protein 44)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RNF44 (ring finger protein 44)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rnf44 (ring finger protein 44)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Rnf44 (ring finger protein 44)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	COQ2 (coenzyme Q2, polyprenyltransferase)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	RNF44 (ring finger protein 44)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Rnf44 (ring finger protein 44)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rnf44 (ring finger protein 44)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	rnf44 (ring finger protein 44)	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	mura	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER)
Drosophila melanogaster (fruit fly):	mura	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	rnf44	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	rnf44	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	9,925,100 - 9,939,496 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	9,930,375 - 9,939,478 (+)	Ensembl				GRCr8
mRatBN7.2	17	9,919,982 - 9,934,376 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	9,919,993 - 9,932,193 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	17	9,939,699 - 9,946,665 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	11,473,134 - 11,480,094 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	9,936,134 - 9,943,100 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	10,458,036 - 10,472,410 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	10,458,110 - 10,472,447 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	12,583,971 - 12,598,211 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	15,987,215 - 15,994,156 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	10,000,270 - 10,007,211 (+)	NCBI		Celera
RGSC_v3.1	17	15,987,214 - 15,994,156 (+)	NCBI
Cytogenetic Map	17	p14	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-methylcholine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (ISO)

acetamide (EXP)

all-trans-retinoic acid (ISO)

antirheumatic drug (ISO)

arsane (ISO)

arsenic atom (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

buta-1,3-diene (ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

choline (ISO)

cisplatin (ISO)

cobalt dichloride (ISO)

copper(II) sulfate (ISO)

cyclophosphamide (EXP)

cyclosporin A (ISO)

diazinon (ISO)

dicrotophos (ISO)

diuron (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

ethanol (ISO)

folic acid (ISO)

fulvestrant (ISO)

gentamycin (EXP)

GSK-J4 (ISO)

L-methionine (ISO)

menadione (ISO)

methylmercury chloride (ISO)

nitrofen (EXP)

ozone (ISO)

paracetamol (EXP,ISO)

phenanthrene (ISO)

pirinixic acid (ISO)

resveratrol (ISO)

rotenone (EXP)

SB 431542 (ISO)

sodium arsenite (ISO)

succimer (ISO)

thioacetamide (EXP)

thiram (ISO)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

troglitazone (ISO)

tungsten (ISO)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

protein ubiquitination (IBA)

Molecular Function

metal ion binding (IEA)

protein binding (ISO)

ubiquitin protein ligase activity (IBA)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:15489334

Genomics

Comparative Map Data

Rnf44
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	9,925,100 - 9,939,496 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	9,930,375 - 9,939,478 (+)	Ensembl				GRCr8
mRatBN7.2	17	9,919,982 - 9,934,376 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	9,919,993 - 9,932,193 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	17	9,939,699 - 9,946,665 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	17	11,473,134 - 11,480,094 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	17	9,936,134 - 9,943,100 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	17	10,458,036 - 10,472,410 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	10,458,110 - 10,472,447 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	12,583,971 - 12,598,211 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	15,987,215 - 15,994,156 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	10,000,270 - 10,007,211 (+)	NCBI		Celera
RGSC_v3.1	17	15,987,214 - 15,994,156 (+)	NCBI
Cytogenetic Map	17	p14	NCBI

RNF44
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	176,526,712 - 176,543,513 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	176,526,700 - 176,538,025 (-)	Ensembl			hg38	GRCh38
GRCh37	5	175,953,713 - 175,964,403 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	175,886,306 - 175,897,027 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	5	175,886,305 - 175,897,027	NCBI
Celera	5	172,536,728 - 172,547,449 (+)	NCBI		Celera
Cytogenetic Map	5	q35.2	NCBI
HuRef	5	170,877,629 - 170,888,310 (-)	NCBI		HuRef
CHM1_1	5	175,386,494 - 175,397,117 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	177,071,267 - 177,092,499 (-)	NCBI		T2T-CHM13v2.0

Rnf44
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	54,827,212 - 54,841,889 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	54,827,212 - 54,841,720 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	13	54,679,399 - 54,694,076 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	54,679,399 - 54,693,907 (-)	Ensembl			mm10	GRCm38
MGSCv37	13	54,780,760 - 54,795,321 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	13	54,689,034 - 54,703,458 (-)	NCBI		MGSCv36	mm8
Celera	13	55,745,272 - 55,759,876 (-)	NCBI		Celera
Cytogenetic Map	13	B1	NCBI
cM Map	13	28.94	NCBI

Rnf44
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955408	28,809,383 - 28,825,865 (-)	Ensembl
ChiLan1.0	NW_004955408	28,809,383 - 28,826,587 (-)	NCBI	ChiLan1.0	ChiLan1.0

RNF44
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	171,606,477 - 171,622,948 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	169,746,016 - 169,762,489 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	171,824,102 - 171,840,582 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	178,896,097 - 178,903,872 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2

RNF44
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	36,785,556 - 36,818,688 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	36,791,672 - 36,800,129 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	36,752,273 - 36,789,008 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	37,151,620 - 37,188,426 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	37,151,028 - 37,177,287 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	36,977,441 - 37,014,215 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	37,165,279 - 37,202,060 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	37,673,402 - 37,710,159 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Rnf44
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	121,761,359 - 121,777,529 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936597	786,266 - 803,186 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936597	786,256 - 802,469 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RNF44
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	81,378,725 - 81,390,230 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	2	81,372,427 - 81,390,232 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	82,974,105 - 82,991,890 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RNF44
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	78,533,012 - 78,544,252 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	78,531,305 - 78,538,504 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666075	9,666,399 - 9,677,358 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rnf44
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624733	13,582,201 - 13,597,798 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Rnf44
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	14	73,021,327 - 73,035,615 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Rnf44
42 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	150
Count of miRNA genes:	108
Interacting mature miRNAs:	120
Transcripts:	ENSRNOT00000060822
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1354581	Bp247	Blood pressure QTL 247	4.5		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	17	1	43999106	Rat
2300002	Iddm36	Insulin dependent diabetes mellitus QTL 36	1.98		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	17	9266755	40968173	Rat
2293664	Bmd28	Bone mineral density QTL 28	5.1	0.0001	femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	17	4360057	27233623	Rat
1300123	Bp194	Blood pressure QTL 194	2.82		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	2120843	42054133	Rat
1582224	Epfw4	Epididymal fat weight QTL 4	3.5	0.0058	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	17	9206505	23859062	Rat
1582225	Bw67	Body weight QTL 67	6.2	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	17	9206505	23859062	Rat
2302377	Scl61	Serum cholesterol level QTL 61	4.36		blood HDL cholesterol amount (VT:0000184)	serum high density lipoprotein cholesterol level (CMO:0000361)	17	6221998	58177198	Rat
1582226	Bw64	Body weight QTL 64	4.2	0.0017	body mass (VT:0001259)	body weight (CMO:0000012)	17	9206505	23859062	Rat
10401807	Kidm52	Kidney mass QTL 52			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	17	1	31706603	Rat
10054088	Scort28	Serum corticosterone level QTL 28	2.04	0.0102	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	17	4733534	49733534	Rat
1582208	Kidm32	Kidney mass QTL 32	3.9	0.0018	kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	17	9206505	23859062	Rat
1549900	Iddm20	Insulin dependent diabetes mellitus QTL 20	3.7		pancreas integrity trait (VT:0010560)	percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)	17	1	22181410	Rat
1354613	Kidm14	Kidney mass QTL 14	6.2		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	17	1	36045694	Rat
2324619	Coatc4	Coat color QTL 4		0.001	coat/hair pigmentation trait (VT:0010463)	pigmented dorsal coat/hair area to total dorsal coat/hair area ratio (CMO:0001811)	17	1	21499218	Rat
2303627	Vencon8	Ventilatory control QTL 8		0.001	respiration trait (VT:0001943)	tidal volume (CMO:0000222)	17	4733534	49733534	Rat
1581553	Pur14	Proteinuria QTL 14	5.3	0.0001	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	17	7985243	16523460	Rat
70184	BpQTLcluster14	Blood pressure QTL cluster 14	3.38		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	17	8574342	32199534	Rat
1582258	Bw76	Body weight QTL 76	4.6	0.0005	body mass (VT:0001259)	body weight (CMO:0000012)	17	9206505	23859062	Rat
631207	Niddm41	Non-insulin dependent diabetes mellitus QTL 41			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	17	1	38037084	Rat
1582199	Insul5	Insulin level QTL 5	3.4	0.0119	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	17	9206505	23859062	Rat
1354662	Rf49	Renal function QTL 49	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	17	1	43999106	Rat
2293648	Bmd31	Bone mineral density QTL 31	4.5	0.0001	femur size trait (VT:1000369)	femoral neck cortical cross-sectional area (CMO:0001702)	17	4360057	27233623	Rat
1354658	Spl8	Serum phospholipid level QTL 8	3.8		blood VLDL phospholipid amount (VT:0010507)	blood very low density lipoprotein phospholipid level (CMO:0001571)	17	1	43999106	Rat
1641902	Colcr7	Colorectal carcinoma resistance QTL 7	3.35	0.0044	intestine integrity trait (VT:0010554)	benign colorectal tumor surface area measurement (CMO:0001799)	17	2120843	22087569	Rat
1582241	Bw70	Body weight QTL 70	4.6	0.0003	body mass (VT:0001259)	body weight (CMO:0000012)	17	9206505	23859062	Rat
1582245	Bw73	Body weight QTL 73	4.6	0.0004	body mass (VT:0001259)	body weight (CMO:0000012)	17	9206505	23859062	Rat
9590316	Scort21	Serum corticosterone level QTL 21	4.75	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	17	1	22877318	Rat

Markers in Region

RH133510

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	17	9,924,788 - 9,925,001 (+)	MAPPER	mRatBN7.2
Rnor_6.0	17	10,462,837 - 10,463,049	NCBI	Rnor6.0
Rnor_5.0	17	12,588,624 - 12,588,836	UniSTS	Rnor5.0
RGSC_v3.4	17	15,986,749 - 15,986,961	UniSTS	RGSC3.4
Celera	17	9,999,804 - 10,000,016	UniSTS
RH 3.4 Map	17	94.7	UniSTS
Cytogenetic Map	17	p14	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001024795	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001443826	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001443827	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253633	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253634	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253637	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253644	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600591	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600592	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600593	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600594	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600595	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039095850	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276555	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276556	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AY724486	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC098030	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474032	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000060822 ⟹ ENSRNOP00000057548

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	9,930,375 - 9,937,313 (+)	Ensembl
mRatBN7.2 Ensembl	17	9,925,255 - 9,932,193 (+)	Ensembl
Rnor_6.0 Ensembl	17	10,463,303 - 10,470,241 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000089885 ⟹ ENSRNOP00000068768

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	9,930,853 - 9,939,478 (+)	Ensembl
mRatBN7.2 Ensembl	17	9,919,993 - 9,932,193 (+)	Ensembl
Rnor_6.0 Ensembl	17	10,458,110 - 10,472,447 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000100371 ⟹ ENSRNOP00000094910

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	17	9,926,601 - 9,932,193 (+)	Ensembl

RefSeq Acc Id:

NM_001024795 ⟹ NP_001019966

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	9,930,375 - 9,937,316 (+)	NCBI
mRatBN7.2	17	9,925,255 - 9,932,196 (+)	NCBI
Rnor_6.0	17	10,463,303 - 10,470,244 (+)	NCBI
Rnor_5.0	17	12,583,971 - 12,598,211 (+)	NCBI
RGSC_v3.4	17	15,987,215 - 15,994,156 (+)	RGD
Celera	17	10,000,270 - 10,007,211 (+)	RGD

Sequence:

show sequence

CAGCCATTGGTCTCTTCAGCCATCTGGGTTGTCCCAGCTTTTTAAAGGCGCCGCGAAACGGAAC
AGAAAACGAGAGTCGAGAGGCGAGGTGAGCTATGAGGTCATCGCAGGCCTGCAGGGCTCGGGAG
TGACGTCATCTCCGGGAAGTGTGCTTGCTGGGCTGAGAGCGGTCTTCTCACCTCGGCTGCCTGA
GAGGCTGCGTGCCCCACAAAGGCCGCGGCCCTAAGAAGGGTTGTGAGCCCCGGTCCAGCCCCTC
CATCTCCCTGCCCTCCTGATGAGGCCATGGGCTCTGGCAGTGACTAAGTGGCCGCCCTCTGCCC
CCGTGGGTCACTGTCGAGTCTCTACGAGACCTAGCAGCAGCCCAGGCCAGCTCTGGGGAAGCAG
CTGCTGCCCCGACCGCCACACCTCTCTGTAGAGGAGCACCGAGCTTCAGAAGCTCCTGCCGGCA
GGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGACCA
GGTGCACCAGGGACCTGTCCCTCTGTCCTACACAGTCACCACAGTGACAACCCAAGGCTTCCCT
TTGCCTGCAAGCCAACATATCCCTGGCTGCAGTGCCCAGCAGCTCCCAGCATGCTCCGTGATGT
TCAGTGGGCAGCACTACCCCCTCTGCTGCCTCCCGCCTCCGCTGATCCAGGCGTGCACCATGCA
GCAGCTCCCCGTGCCCTACCACACCTACCCCCACCTCATCTCCAGTGACCACTACATCCTTCAC
CCCCCACCACCGGCCCCGCCGCCCCAACCTACCCACATGGCCCCGCTTGGGCAGTTTGTATCCC
TGCAGACCCAGCACCCACGTATGCCCCTGCAGCGGCTGGACAATGAGATGGACCTTCGAGGAGA
TCAGCACCCCTTGGGTAGCTTTACTTACTCCACCTCTGCCACTGGCCCCACCTTGTCGCCTTCA
GTGCCCCTTCACTACCTACCCCATGATCCACTGCACCAGGAGCTGTCCTTTGGTGTTCCATATT
CCCACATGATGCCACGAAGACTGAGCACACAAAGATACCGCCTGCAACAGCCGCTGCCACCACC
CCCACCGCCGCCTCCACCATCGTATTACCCAAGCTTCCTCCCCTACTTCCTTTCAATGCTGCCA
ATGTCACCAACCACCGTGGGCCCTACCATCAGCCTGGACCTGGATGTGGATGACGTGGAGATGG
AGAACTATGAGGCTCTCCTGAACCTGGCTGAGAGGCTAGGAGATGCCAAGCCCCGAGGCCTCAC
CAAAGCAGACATAGAGCAGCTGCCGTCATACCGCTTTAACCCTGACAGTCACCAGTCTGAGCAG
ACGCTGTGTGTGGTCTGCTTCAGTGACTTCGAGGTGCGGCAGCTGCTCCGAGTTCTCCCCTGCA
ACCACGAGTTCCATGCCAAGTGTGTTGACAAGTGGTTGAAGGCCAACCGGACCTGTCCCATTTG
CCGGGCGGATGCCTCCGAGGTGCCCAGGGAGGCCGAGTGAGGCTCCACAGCCACCACAAGAGCC
CTGCCCAAAGCTCCGGAGACGGGTGGGGGGAAGCAGGGAGTGGCCCAGGGAGAACTGTAAGGGA
GGGGCCAGGCCTGTCAGCGTTCCCACCTGCTACTCCAGAGCTGGTGCCAGGGTCAGCCCTGGAG
AAGCCCCTGCAATAAGCCCCTGCGTTTGCCAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA

hide sequence

RefSeq Acc Id:

XM_006253633 ⟹ XP_006253695

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	9,930,417 - 9,939,496 (+)	NCBI
mRatBN7.2	17	9,925,300 - 9,934,376 (+)	NCBI
Rnor_6.0	17	10,462,361 - 10,472,410 (+)	NCBI
Rnor_5.0	17	12,583,971 - 12,598,211 (+)	NCBI

Sequence:

show sequence

ACAGTTACCAAATTTAAAAATCTAAACCAGGAGTGGTGGTATATGCCTGTAATTTCAGCTCTTG
GGGAAGATCAAGAGTTTGAAGCTGCCTGAGATACAGGAGACTATGTTTATAAACAAACAAAAAC
AACAGTAAACAAAGAAAATAGAAAATGCCCTCCCGAACAGGTGCACCCTAATGACAATTCCTGT
ATCATTTCAGGATACTGTATGTAGATACAATATCCAGTTGAAATTAATAATACTGTTACATCCT
ATTAGCAAATTAGTTTGATTTTTTTAGTATTTGAGATTATGGGATACATCTACAAAATACAGAG
TGTCACCAGTCTGTAGCCACAGAGGTTTAACAAATGTTGCCATTTTCTACTGACACCTTGTTCT
AGGTTGGTGGGCGCTGGAAGAATCCAGTTACTACAGACCATCCTAGTAGACATGAGTGCTTTAG
GTAATGCAGATAGATGCAGAAGCTTATATAATCGGTGCAGACACCATACCCCACTTTGTACGTT
TGCCTGGAGGACAGTCTAAGGGGAGACCGATGTCTGCTCCATCTCTTCTCTCAGCTGTGTTTCC
TGGTGTGTGATACTTTGTTGTTTGTCTTTTGAAGACAAGGTCTCTGTAGCTATGTAGACCAGTC
TGTTCTCGAACTCACATTGATCCACCGGTCCTGGTGGAGTGACTCTCCTCTAGGGTATAGTGGA
CTCCTTGTCATAATCCCTAGGCTCACACGTGTTGGGAGGCATAGAGAACTAAAGTGCAGAAACT
TCCCTGGGTTTGGTACAAGGGATTCCAGCTCTTCCTACTACTGCTGAACTAGAGTCTCTCCACC
CCTTTTCCCGGGCCGCGCTGGAGGCGGGGTGGCGAAATGTTTCTGTGACGTCATCATACGCAGG
ACCAATCCCCCTGCCCGGGAGACGTTAAATCATTTGCATGGGACCTCAGCCATTGGTCTCTTCA
GCCATCTGGGTTGTCCCAGCTTTTTAAAGGCGCCGCGAAACGGAACAGAAAACGAGAGTCGAGA
GGCGAGGTGAGCTATGAGGTCATCGCAGGCCTGCAGGGCTCGGGAGTGACGTCATCTCCGGGAA
GTGTGCTTGCTGGGCTGAGAGCGGTCTTCTCACCTCGGCTGCCTGAGAGGCTGCGTGCCCCACA
AAGGCCGCGGCCCTAAGAAGGGTTGTGAGCCCCGGTCCAGCCCCTCCATCTCCCTGCCCTCCTG
ATGAGGCCATGGGCTCTGGCAGTGACTAAGTGGCCGCCCTCTGCCCCCGTGGGTCACTGTCGAG
TCTCTACGAGACCTAGCAGCAGCCCAGGCCAGCTCTGGGGAAGCCTTGGCCACGAGGGCCCCCT
GGCCAGCCCACCTGCCCAGAATGAGCGCTTACCCTCCCAGCAGCTGCTGCCCCGACCGCCACAC
CTCTCTGTAGAGGAGCACCGAGCTTCAGAAGCTCCTGCCGGCAGGAGCCCCCGAATGCTGCACC
CAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGACCAGGTGCACCAGGGACCTGTCCC
TCTGTCCTACACAGTCACCACAGTGACAACCCAAGGCTTCCCTTTGCCTGCAAGCCAACATATC
CCTGGCTGCAGTGCCCAGCAGCTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCACTACCCCC
TCTGCTGCCTCCCGCCTCCGCAGCTGATCCAGGCGTGCACCATGCAGCAGCTCCCCGTGCCCTA
CCACACCTACCCCCACCTCATCTCCAGTGACCACTACATCCTTCACCCCCCACCACCGGCCCCG
CCGCCCCAACCTACCCACATGGCCCCGCTTGGGCAGTTTGTATCCCTGCAGACCCAGCACCCAC
GTATGCCCCTGCAGCGGCTGGACAATGAGATGGACCTTCGAGGAGATCAGCACCCCTTGGGTAG
CTTTACTTACTCCACCTCTGCCACTGGCCCCACCTTGTCGCCTTCAGTGCCCCTTCACTACCTA
CCCCATGATCCACTGCACCAGGAGCTGTCCTTTGGTGTTCCATATTCCCACATGATGCCACGAA
GACTGAGCACACAAAGATACCGCCTGCAACAGCCGCTGCCACCACCCCCACCGCCGCCTCCACC
ATCGTATTACCCAAGCTTCCTCCCCTACTTCCTTTCAATGCTGCCAATGTCACCAACCACCGTG
GGCCCTACCATCAGCCTGGACCTGGATGTGGATGACGTGGAGATGGAGAACTATGAGGCTCTCC
TGAACCTGGCTGAGAGGCTAGGAGATGCCAAGCCCCGAGGCCTCACCAAAGCAGACATAGAGCA
GCTGCCGTCATACCGCTTTAACCCTGACAGTCACCAGTCTGAGCAGACGCTGTGTGTGGTCTGC
TTCAGTGACTTCGAGGTGCGGCAGCTGCTCCGAGTTCTCCCCTGCAACCACGAGTTCCATGCCA
AGTGTGTTGACAAGTGGTTGAAGGCCAACCGGACCTGTCCCATTTGCCGGGCGGATGCCTCCGA
GGTGCCCAGGGAGGCCGAGTGAGGCTCCACAGCCACCACAAGAGCCCTGCCCAAAGCTCCGGAG
ACGGGTGGGGGGAAGCAGGGAGTGGCCCAGGGAGAACTGTAAGGGAGGGGCCAGGCCTGTCAGC
GTTCCCACCTGCTACTCCAGAGCTGGTGCCAGGGTCAGCCCTGGAGAAGCCCCTGCAATAAGCC
CCTGCGTTTGCCAAGCTCCAAAGACTCCTTCCCCCGTCTGCCTGCCTGCCTGCCTGCCTGCCCG
CCCGCCATGGAGCTGTCTGAGTGTCCCCAACTCAGTCTGCCTCCTAGTTACCCCTGGGTCCTTC
TTCCTGCTGGCTCTGGGAGGCAGGAGTCCATTGCCTGAGTGTGGTGGCTGGTGTGATTCCTCAG
GCCCCAAAACGGGCCAAGGAATGGCCGCCCTGGGTCAACTGGTCTCTTGTACTGAAGTGAAGTG
TTCCTTCCCTGCCCTAGTGTCCTGCCAGGTGTGTGGGCAGAGAGTAGCCAGAGACATTTCCTCA
GTTCTCCTGTTTAACTCCAGACAGACTTAGGCAGTCAGCTCTGCCGCTGTGCGGGGTGGGTCTG
ACCCCCAGGACCCTTACTTACCCCAGGCACAGCACTCTAGCCCCCCTCCAGGCTGGAGAGTGTC
CCAGCCAGGCTCCATGAGCAAGTGGGAAGGGGCTCCAACGGATACGTTGTGTTCTGCAGTAGCC
GAGCCACGATCTGGGCATGTCCTTGTGTTTCTGGTGGCTACCCCTTCACCAGTGACAATGTCAG
ACCCATGCTCGATCTTCCCCTCTGTCGTTTTGCATGAATGTGAGGAACAGCAGTTTTTGTTTAT
TCATTTGGCCCAAAATTGCGTGTAGGGTGTGGATATTTAAGAGGTGTTTGGTTTTTATTATCTT
GTTTTCCCTTTGGTGTAATAGGAGTGGGGGCATAGGGACCGACCAGGACCAAATGCCCATGGGG
CAGGGTAGGGTCAGGTTGTGCCACACCAGTCCTCCTCATGAGTGTGCGGCTGGGACTGCGCTGG
GTGGCTGGAAGTCACAGGGCAGAGTTGGGGGGTCTGTGCTCAGCTGATAACTGCCATGCACTGT
ACTGCACATGTCCCTAGAGCCTCCCGGGACCGGCTGCTTTTCAGGGCATCTCCTCTCCAGCCAG
GGCCTGTGTCCCACCTGCCTGGGTGAGTCTCCTAGCAATCCGGTGAGGACAGGGATCAGGGAGG
GTGTGAACCTCCACCTGGGGGCCCCTCCCAGCCTGATTCCTGCCCTCCAAGGTCTGGAGGAGGC
TGTGTTCCTTACCCTCCCTCCAGGTCCCTTCCCTTTCCCTTCCTACCGCCAACCAACTGGGGTT
GCTGCCCGGAGTGAAGGAACCGCGTGTGGGGCCGGCACATCCTAGCAGGCAGCCATTGGCGCCT
GCTGCCTCAGGGATGCTCCAACCACCCTCCTTCTCACAGCAGCCCTGGCTCCCTGCCTCCCGCC
CCAGCCTGCCAGGGCCCCATTGGCCTGCTCCCATCCCACAAGAACCCAAAGTCTTACTGTATAT
AACTCCAGGTGATGTTTCTATATTTATAGCAGTGTTGAAAATCCACGTGTTTTACACAGAGAAC
CACCTTCTCCAACCCCCATCCCTTCCTCACCCCAAAAAAGGTTTTCAAACCCTTGTGGTTCCTG
GGGCAGCGGAATCGGCTCATGGATTGTGTCGGCTGCGGTGAGGATTCCAACAAGCAGCTACTAG
GGGGGAATACACCTTTTCTTTTTAATCATTTAAGAAGATTTATGAAGCAATTACTTAGGATGTT
TGTGATTTGCCGACCTTGCTGTAGATGCCATGTTACCAATGATCTCCTGTGGTGGGGGCTGGCA
TTGTTTACTCTTTATTTACCAACTTCTGGCCTAGGCATGACAGTGGGCACCTTCCCCAGCACTG
CTGGGCCAGCGCCTGTGTTCTGTGTTAGAAGGTTTATATATATATAACTGAACACACACACGCA
CACATATATAAACACACGTGATTTGGGGGCCCTGTTCCTTGCACATCTTACAGTTACCTCATTT
TTCCCATGTATGTATTTGAGAAAATGCTAATATATAGAGACAAATGGTTCTTAAAGCTTAAATG
TGTGGTTTTTCCATCCCATTGGACTCACATTGGTTTGTAGCATTTATCATAACTAGTATGTTGT
ACTATATATGTGTATACATTTAACATAACTAGTATGTTGTACTATATATGTGTATACTGATTGA
AATTTTTAACAGATTTGTACTTTTTTTAAAATGAAAGTTGCTAGTTCTGCTTGACCAAGTAGTG
CAATCATTATTTTTTTTAATATTGTTGCTGATTTCAGAGGGATATTCACTAATAAATGTATGAT
GAATA

hide sequence

RefSeq Acc Id:

XM_006253634 ⟹ XP_006253696

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	9,925,100 - 9,939,496 (+)	NCBI
mRatBN7.2	17	9,919,982 - 9,934,376 (+)	NCBI
Rnor_6.0	17	10,458,036 - 10,472,410 (+)	NCBI
Rnor_5.0	17	12,583,971 - 12,598,211 (+)	NCBI

Sequence:

show sequence

GCAGGGTCGTCGCCACTGGGAGGTTCCACTGCGGGCGCAGGGGGAGGGCCGCGGCCGGCGGCTT
GCGAGCCGCAGCCGGAGCCGGACCGGGCTGCCCCGGGAGCAACGCGCCGCTGCCTATTCGGGGT
GGAGCCCAGCCGTGGCCCCAGGGTTGTGAGCCCCGGTCCAGCCCCTCCATCTCCCTGCCCTCCT
GATGAGGCCATGGGCTCTGGCAGTGACTAAGTGGCCGCCCTCTGCCCCCGTGGGTCACTGTCGA
GTCTCTACGAGACCTAGCAGCAGCCCAGGCCAGCTCTGGGGAAGCCTTGGCCACGAGGGCCCCC
TGGCCAGCCCACCTGCCCAGAATGAGCGCTTACCCTCCCAGCAGCTGCTGCCCCGACCGCCACA
CCTCTCTGTAGAGGAGCACCGAGCTTCAGAAGCTCCTGCCGGCAGGAGCCCCCGAATGCTGCAC
CCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGACCAGGTGCACCAGGGACCTGTCC
CTCTGTCCTACACAGTCACCACAGTGACAACCCAAGGCTTCCCTTTGCCTGCAAGCCAACATAT
CCCTGGCTGCAGTGCCCAGCAGCTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCACTACCCC
CTCTGCTGCCTCCCGCCTCCGCAGCTGATCCAGGCGTGCACCATGCAGCAGCTCCCCGTGCCCT
ACCACACCTACCCCCACCTCATCTCCAGTGACCACTACATCCTTCACCCCCCACCACCGGCCCC
GCCGCCCCAACCTACCCACATGGCCCCGCTTGGGCAGTTTGTATCCCTGCAGACCCAGCACCCA
CGTATGCCCCTGCAGCGGCTGGACAATGAGATGGACCTTCGAGGAGATCAGCACCCCTTGGGTA
GCTTTACTTACTCCACCTCTGCCACTGGCCCCACCTTGTCGCCTTCAGTGCCCCTTCACTACCT
ACCCCATGATCCACTGCACCAGGAGCTGTCCTTTGGTGTTCCATATTCCCACATGATGCCACGA
AGACTGAGCACACAAAGATACCGCCTGCAACAGCCGCTGCCACCACCCCCACCGCCGCCTCCAC
CATCGTATTACCCAAGCTTCCTCCCCTACTTCCTTTCAATGCTGCCAATGTCACCAACCACCGT
GGGCCCTACCATCAGCCTGGACCTGGATGTGGATGACGTGGAGATGGAGAACTATGAGGCTCTC
CTGAACCTGGCTGAGAGGCTAGGAGATGCCAAGCCCCGAGGCCTCACCAAAGCAGACATAGAGC
AGCTGCCGTCATACCGCTTTAACCCTGACAGTCACCAGTCTGAGCAGACGCTGTGTGTGGTCTG
CTTCAGTGACTTCGAGGTGCGGCAGCTGCTCCGAGTTCTCCCCTGCAACCACGAGTTCCATGCC
AAGTGTGTTGACAAGTGGTTGAAGGCCAACCGGACCTGTCCCATTTGCCGGGCGGATGCCTCCG
AGGTGCCCAGGGAGGCCGAGTGAGGCTCCACAGCCACCACAAGAGCCCTGCCCAAAGCTCCGGA
GACGGGTGGGGGGAAGCAGGGAGTGGCCCAGGGAGAACTGTAAGGGAGGGGCCAGGCCTGTCAG
CGTTCCCACCTGCTACTCCAGAGCTGGTGCCAGGGTCAGCCCTGGAGAAGCCCCTGCAATAAGC
CCCTGCGTTTGCCAAGCTCCAAAGACTCCTTCCCCCGTCTGCCTGCCTGCCTGCCTGCCTGCCC
GCCCGCCATGGAGCTGTCTGAGTGTCCCCAACTCAGTCTGCCTCCTAGTTACCCCTGGGTCCTT
CTTCCTGCTGGCTCTGGGAGGCAGGAGTCCATTGCCTGAGTGTGGTGGCTGGTGTGATTCCTCA
GGCCCCAAAACGGGCCAAGGAATGGCCGCCCTGGGTCAACTGGTCTCTTGTACTGAAGTGAAGT
GTTCCTTCCCTGCCCTAGTGTCCTGCCAGGTGTGTGGGCAGAGAGTAGCCAGAGACATTTCCTC
AGTTCTCCTGTTTAACTCCAGACAGACTTAGGCAGTCAGCTCTGCCGCTGTGCGGGGTGGGTCT
GACCCCCAGGACCCTTACTTACCCCAGGCACAGCACTCTAGCCCCCCTCCAGGCTGGAGAGTGT
CCCAGCCAGGCTCCATGAGCAAGTGGGAAGGGGCTCCAACGGATACGTTGTGTTCTGCAGTAGC
CGAGCCACGATCTGGGCATGTCCTTGTGTTTCTGGTGGCTACCCCTTCACCAGTGACAATGTCA
GACCCATGCTCGATCTTCCCCTCTGTCGTTTTGCATGAATGTGAGGAACAGCAGTTTTTGTTTA
TTCATTTGGCCCAAAATTGCGTGTAGGGTGTGGATATTTAAGAGGTGTTTGGTTTTTATTATCT
TGTTTTCCCTTTGGTGTAATAGGAGTGGGGGCATAGGGACCGACCAGGACCAAATGCCCATGGG
GCAGGGTAGGGTCAGGTTGTGCCACACCAGTCCTCCTCATGAGTGTGCGGCTGGGACTGCGCTG
GGTGGCTGGAAGTCACAGGGCAGAGTTGGGGGGTCTGTGCTCAGCTGATAACTGCCATGCACTG
TACTGCACATGTCCCTAGAGCCTCCCGGGACCGGCTGCTTTTCAGGGCATCTCCTCTCCAGCCA
GGGCCTGTGTCCCACCTGCCTGGGTGAGTCTCCTAGCAATCCGGTGAGGACAGGGATCAGGGAG
GGTGTGAACCTCCACCTGGGGGCCCCTCCCAGCCTGATTCCTGCCCTCCAAGGTCTGGAGGAGG
CTGTGTTCCTTACCCTCCCTCCAGGTCCCTTCCCTTTCCCTTCCTACCGCCAACCAACTGGGGT
TGCTGCCCGGAGTGAAGGAACCGCGTGTGGGGCCGGCACATCCTAGCAGGCAGCCATTGGCGCC
TGCTGCCTCAGGGATGCTCCAACCACCCTCCTTCTCACAGCAGCCCTGGCTCCCTGCCTCCCGC
CCCAGCCTGCCAGGGCCCCATTGGCCTGCTCCCATCCCACAAGAACCCAAAGTCTTACTGTATA
TAACTCCAGGTGATGTTTCTATATTTATAGCAGTGTTGAAAATCCACGTGTTTTACACAGAGAA
CCACCTTCTCCAACCCCCATCCCTTCCTCACCCCAAAAAAGGTTTTCAAACCCTTGTGGTTCCT
GGGGCAGCGGAATCGGCTCATGGATTGTGTCGGCTGCGGTGAGGATTCCAACAAGCAGCTACTA
GGGGGGAATACACCTTTTCTTTTTAATCATTTAAGAAGATTTATGAAGCAATTACTTAGGATGT
TTGTGATTTGCCGACCTTGCTGTAGATGCCATGTTACCAATGATCTCCTGTGGTGGGGGCTGGC
ATTGTTTACTCTTTATTTACCAACTTCTGGCCTAGGCATGACAGTGGGCACCTTCCCCAGCACT
GCTGGGCCAGCGCCTGTGTTCTGTGTTAGAAGGTTTATATATATATAACTGAACACACACACGC
ACACATATATAAACACACGTGATTTGGGGGCCCTGTTCCTTGCACATCTTACAGTTACCTCATT
TTTCCCATGTATGTATTTGAGAAAATGCTAATATATAGAGACAAATGGTTCTTAAAGCTTAAAT
GTGTGGTTTTTCCATCCCATTGGACTCACATTGGTTTGTAGCATTTATCATAACTAGTATGTTG
TACTATATATGTGTATACATTTAACATAACTAGTATGTTGTACTATATATGTGTATACTGATTG
AAATTTTTAACAGATTTGTACTTTTTTTAAAATGAAAGTTGCTAGTTCTGCTTGACCAAGTAGT
GCAATCATTATTTTTTTTAATATTGTTGCTGATTTCAGAGGGATATTCACTAATAAATGTATGA
TGAATA

hide sequence

RefSeq Acc Id:

XM_006253637 ⟹ XP_006253699

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	9,930,620 - 9,939,496 (+)	NCBI
mRatBN7.2	17	9,925,495 - 9,934,376 (+)	NCBI
Rnor_6.0	17	10,462,361 - 10,472,410 (+)	NCBI
Rnor_5.0	17	12,583,971 - 12,598,211 (+)	NCBI

Sequence:

show sequence

ACAGTTACCAAATTTAAAAATCTAAACCAGGAGTGGTGGTATATGCCTGTAATTTCAGCTCTTG
GGGAAGATCAAGAGTTTGAAGCTGCCTGAGATACAGGAGACTATGTTTATAAACAAACAAAAAC
AACAGTAAACAAAGAAAATAGAAAATGCCCTCCCGAACAGGTGCACCCTAATGACAATTCCTGT
ATCATTTCAGGATACTGTATGTAGATACAATATCCAGTTGAAATTAATAATACTGTTACATCCT
ATTAGCAAATTAGTTTGATTTTTTTAGTATTTGAGATTATGGGATACATCTACAAAATACAGAG
TGTCACCAGTCTGTAGCCACAGAGGTTTAACAAATGTTGCCATTTTCTACTGACACCTTGTTCT
AGGTTGGTGGGCGCTGGAAGAATCCAGTTACTACAGACCATCCTAGTAGACATGAGTGCTTTAG
GTAATGCAGATAGATGCAGAAGCTTATATAATCGGTGCAGACACCATACCCCACTTTGTACGTT
TGCCTGGAGGACAGTCTAAGGGGAGACCGATGTCTGCTCCATCTCTTCTCTCAGCTGTGTTTCC
TGGTGTGTGATACTTTGTTGTTTGTCTTTTGAAGACAAGGTCTCTGTAGCTATGTAGACCAGTC
TGTTCTCGAACTCACATTGATCCACCGGTCCTGGTGGAGTGACTCTCCTCTAGGGTATAGTGGA
CTCCTTGTCATAATCCCTAGGCTCACACGTGTTGGGAGGCATAGAGAACTAAAGTGCAGAAACT
TCCCTGGGTTTGGTACAAGGGATTCCAGCTCTTCCTACTACTGCTGAACTAGAGTCTCTCCACC
CCTTTTCCCGGGCCGCGCTGGAGGCGGGGTGGCGAAATGTTTCTGTGACGTCATCATACGCAGG
ACCAATCCCCCTGCCCGGGAGACGTTAAATCATTTGCATGGGACCTCAGCCATTGGTCTCTTCA
GCCATCTGGGTTGTCCCAGCTTTTTAAAGGCGCCGCGAAACGGAACAGAAAACGAGAGTCGAGA
GGCGAGGTGAGCTATGAGGTCATCGCAGGCCTGCAGGGCTCGGGAGTGACGTCATCTCCGGGAA
GTGTGCTTGCTGGGCTGAGAGCGGTCTTCTCACCTCGGCTGCCTGAGAGGCTGCGTGCCCCACA
AAGGCCGCGGCCCTAAGAAGGTAACCATGACATGTTAGTGCGCGCCGCCGCCCGGGCACCTGAG
GTCGTGCCCCTTTTCACCTGCAACCTGGCCTTGGGGGTTTTGAAGTATGAGGTGGGGGCGAAGA
GGCTTTTTTAGCCAGCCTTTCAAGATGGCGACCCGCTAGTCACGTGCCGTCCGCAGGACCCGAT
TGGCCGACGCGCGGGGTGGGGCGGGGCCTGCGGGGCGGGGCGGGTGCCGGCTCCAGCCGCTACT
GTTTGCTTGAGCGTCCTGGCGCGCCCCCGCGAGCCGCCTCCCGCGCTGCGCGCCTCCGCCGCTC
CGAATGTTGTGAATCAAAACGTGGGGCTGGTTCCATCCGGCCGCCGCGGACAGTTCTTAAAGGG
CCAGCCCTCGGAGAGCACAGCTGCGTCCTGCGCCGCCCTTCTCTCGGGCCCGGGCTGGGGAGGC
GGAAGACAGAGCAGGCTCGCGAAGGAGCGGGCGCTTCACCGTCCGCACCCCGCATCGCGAACAA
AGGAGCCCGCGTGTGGTCGGACGGCTGCCGGGTTGTGAGCCCCGGTCCAGCCCCTCCATCTCCC
TGCCCTCCTGATGAGGCCATGGGCTCTGGCAGTGACTAAGTGGCCGCCCTCTGCCCCCGTGGGT
CACTGTCGAGTCTCTACGAGACCTAGCAGCAGCCCAGGCCAGCTCTGGGGAAGCCTTGGCCACG
AGGGCCCCCTGGCCAGCCCACCTGCCCAGAATGAGCGCTTACCCTCCCAGCAGCTGCTGCCCCG
ACCGCCACACCTCTCTGTAGAGGAGCACCGAGCTTCAGAAGCTCCTGCCGGCAGGAGCCCCCGA
ATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGACCAGGTGCACCAGG
GACCTGTCCCTCTGTCCTACACAGTCACCACAGTGACAACCCAAGGCTTCCCTTTGCCTGCAAG
CCAACATATCCCTGGCTGCAGTGCCCAGCAGCTCCCAGCATGCTCCGTGATGTTCAGTGGGCAG
CACTACCCCCTCTGCTGCCTCCCGCCTCCGCAGCTGATCCAGGCGTGCACCATGCAGCAGCTCC
CCGTGCCCTACCACACCTACCCCCACCTCATCTCCAGTGACCACTACATCCTTCACCCCCCACC
ACCGGCCCCGCCGCCCCAACCTACCCACATGGCCCCGCTTGGGCAGTTTGTATCCCTGCAGACC
CAGCACCCACGTATGCCCCTGCAGCGGCTGGACAATGAGATGGACCTTCGAGGAGATCAGCACC
CCTTGGGTAGCTTTACTTACTCCACCTCTGCCACTGGCCCCACCTTGTCGCCTTCAGTGCCCCT
TCACTACCTACCCCATGATCCACTGCACCAGGAGCTGTCCTTTGGTGTTCCATATTCCCACATG
ATGCCACGAAGACTGAGCACACAAAGATACCGCCTGCAACAGCCGCTGCCACCACCCCCACCGC
CGCCTCCACCATCGTATTACCCAAGCTTCCTCCCCTACTTCCTTTCAATGCTGCCAATGTCACC
AACCACCGTGGGCCCTACCATCAGCCTGGACCTGGATGTGGATGACGTGGAGATGGAGAACTAT
GAGGCTCTCCTGAACCTGGCTGAGAGGCTAGGAGATGCCAAGCCCCGAGGCCTCACCAAAGCAG
ACATAGAGCAGCTGCCGTCATACCGCTTTAACCCTGACAGTCACCAGTCTGAGCAGACGCTGTG
TGTGGTCTGCTTCAGTGACTTCGAGGTGCGGCAGCTGCTCCGAGTTCTCCCCTGCAACCACGAG
TTCCATGCCAAGTGTGTTGACAAGTGGTTGAAGGCCAACCGGACCTGTCCCATTTGCCGGGCGG
ATGCCTCCGAGGTGCCCAGGGAGGCCGAGTGAGGCTCCACAGCCACCACAAGAGCCCTGCCCAA
AGCTCCGGAGACGGGTGGGGGGAAGCAGGGAGTGGCCCAGGGAGAACTGTAAGGGAGGGGCCAG
GCCTGTCAGCGTTCCCACCTGCTACTCCAGAGCTGGTGCCAGGGTCAGCCCTGGAGAAGCCCCT
GCAATAAGCCCCTGCGTTTGCCAAGCTCCAAAGACTCCTTCCCCCGTCTGCCTGCCTGCCTGCC
TGCCTGCCCGCCCGCCATGGAGCTGTCTGAGTGTCCCCAACTCAGTCTGCCTCCTAGTTACCCC
TGGGTCCTTCTTCCTGCTGGCTCTGGGAGGCAGGAGTCCATTGCCTGAGTGTGGTGGCTGGTGT
GATTCCTCAGGCCCCAAAACGGGCCAAGGAATGGCCGCCCTGGGTCAACTGGTCTCTTGTACTG
AAGTGAAGTGTTCCTTCCCTGCCCTAGTGTCCTGCCAGGTGTGTGGGCAGAGAGTAGCCAGAGA
CATTTCCTCAGTTCTCCTGTTTAACTCCAGACAGACTTAGGCAGTCAGCTCTGCCGCTGTGCGG
GGTGGGTCTGACCCCCAGGACCCTTACTTACCCCAGGCACAGCACTCTAGCCCCCCTCCAGGCT
GGAGAGTGTCCCAGCCAGGCTCCATGAGCAAGTGGGAAGGGGCTCCAACGGATACGTTGTGTTC
TGCAGTAGCCGAGCCACGATCTGGGCATGTCCTTGTGTTTCTGGTGGCTACCCCTTCACCAGTG
ACAATGTCAGACCCATGCTCGATCTTCCCCTCTGTCGTTTTGCATGAATGTGAGGAACAGCAGT
TTTTGTTTATTCATTTGGCCCAAAATTGCGTGTAGGGTGTGGATATTTAAGAGGTGTTTGGTTT
TTATTATCTTGTTTTCCCTTTGGTGTAATAGGAGTGGGGGCATAGGGACCGACCAGGACCAAAT
GCCCATGGGGCAGGGTAGGGTCAGGTTGTGCCACACCAGTCCTCCTCATGAGTGTGCGGCTGGG
ACTGCGCTGGGTGGCTGGAAGTCACAGGGCAGAGTTGGGGGGTCTGTGCTCAGCTGATAACTGC
CATGCACTGTACTGCACATGTCCCTAGAGCCTCCCGGGACCGGCTGCTTTTCAGGGCATCTCCT
CTCCAGCCAGGGCCTGTGTCCCACCTGCCTGGGTGAGTCTCCTAGCAATCCGGTGAGGACAGGG
ATCAGGGAGGGTGTGAACCTCCACCTGGGGGCCCCTCCCAGCCTGATTCCTGCCCTCCAAGGTC
TGGAGGAGGCTGTGTTCCTTACCCTCCCTCCAGGTCCCTTCCCTTTCCCTTCCTACCGCCAACC
AACTGGGGTTGCTGCCCGGAGTGAAGGAACCGCGTGTGGGGCCGGCACATCCTAGCAGGCAGCC
ATTGGCGCCTGCTGCCTCAGGGATGCTCCAACCACCCTCCTTCTCACAGCAGCCCTGGCTCCCT
GCCTCCCGCCCCAGCCTGCCAGGGCCCCATTGGCCTGCTCCCATCCCACAAGAACCCAAAGTCT
TACTGTATATAACTCCAGGTGATGTTTCTATATTTATAGCAGTGTTGAAAATCCACGTGTTTTA
CACAGAGAACCACCTTCTCCAACCCCCATCCCTTCCTCACCCCAAAAAAGGTTTTCAAACCCTT
GTGGTTCCTGGGGCAGCGGAATCGGCTCATGGATTGTGTCGGCTGCGGTGAGGATTCCAACAAG
CAGCTACTAGGGGGGAATACACCTTTTCTTTTTAATCATTTAAGAAGATTTATGAAGCAATTAC
TTAGGATGTTTGTGATTTGCCGACCTTGCTGTAGATGCCATGTTACCAATGATCTCCTGTGGTG
GGGGCTGGCATTGTTTACTCTTTATTTACCAACTTCTGGCCTAGGCATGACAGTGGGCACCTTC
CCCAGCACTGCTGGGCCAGCGCCTGTGTTCTGTGTTAGAAGGTTTATATATATATAACTGAACA
CACACACGCACACATATATAAACACACGTGATTTGGGGGCCCTGTTCCTTGCACATCTTACAGT
TACCTCATTTTTCCCATGTATGTATTTGAGAAAATGCTAATATATAGAGACAAATGGTTCTTAA
AGCTTAAATGTGTGGTTTTTCCATCCCATTGGACTCACATTGGTTTGTAGCATTTATCATAACT
AGTATGTTGTACTATATATGTGTATACATTTAACATAACTAGTATGTTGTACTATATATGTGTA
TACTGATTGAAATTTTTAACAGATTTGTACTTTTTTTAAAATGAAAGTTGCTAGTTCTGCTTGA
CCAAGTAGTGCAATCATTATTTTTTTTAATATTGTTGCTGATTTCAGAGGGATATTCACTAATA
AATGTATGATGAATA

hide sequence

RefSeq Acc Id:

XM_006253644 ⟹ XP_006253706

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	9,934,192 - 9,939,496 (+)	NCBI
mRatBN7.2	17	9,920,022 - 9,934,376 (+)	NCBI
Rnor_6.0	17	10,458,038 - 10,472,410 (+)	NCBI
Rnor_5.0	17	12,583,971 - 12,598,211 (+)	NCBI

Sequence:

show sequence

AGGGTCGTCGCCACTGGGAGGTTCCACTGCGGGCGCAGGGGGAGGGCCGCGGCCGGCGGCTTGC
GAGCCGCAGCCGGAGCCGGACCGGGCTGCCCCGGGAGCAACGCGCCGCTGCCTATTCGGGGTGG
AGCCCAGCCGTGGCCCCAGGGTTGTGAGCCCCGGTCCAGCCCCTCCATCTCCCTGCCCTCCTGA
TGAGGCCATGGGCTCTGGCAGTGACTAAGTGGCCGCCCTCTGCCCCCGTGGGTCACTGTCGAGT
CTCTACGAGACCTAGCAGCAGCCCAGGCCAGCTCTGGGGAAGCAGCTGCTGCCCCGACCGCCAC
ACCTCTCTGTAGAGGAGCACCGAGCTTCAGAAGCTCCTGCCGGCAGGAGCCCCCGAATGCTGCA
CCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGACCAGGTGCACCAGGGACCTGTC
CCTCTGTCCTACACAGTCACCACAGTGACAACCCAAGGCTTCCCTTTGCCTGCAAGCCAACATA
TCCCTGGCTGCAGTGCCCAGCAGCTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCACTACCC
CCTCTGCTGCCTCCCGCCTCCGCAGCTGATCCAGGCGTGCACCATGCAGCAGCTCCCCGTGCCC
TACCACACCTACCCCCACCTCATCTCCAGTGACCACTACATCCTTCACCCCCCACCACCGGCCC
CGCCGCCCCAACCTACCCACATGGCCCCGCTTGGGCAGTTTGTATCCCTGCAGACCCAGCACCC
ACGTATGCCCCTGCAGCGGCTGGACAATGAGATGGACCTTCGAGGAGATCAGCACCCCTTGGGT
AGCTTTACTTACTCCACCTCTGCCACTGGCCCCACCTTGTCGCCTTCAGTGCCCCTTCACTACC
TACCCCATGATCCACTGCACCAGGAGCTGTCCTTTGGTGTTCCATATTCCCACATGATGCCACG
AAGACTGAGCACACAAAGATACCGCCTGCAACAGCCGCTGCCACCACCCCCACCGCCGCCTCCA
CCATCGTATTACCCAAGCTTCCTCCCCTACTTCCTTTCAATGCTGCCAATGTCACCAACCACCG
TGGGCCCTACCATCAGCCTGGACCTGGATGTGGATGACGTGGAGATGGAGAACTATGAGGCTCT
CCTGAACCTGGCTGAGAGGCTAGGAGATGCCAAGCCCCGAGGCCTCACCAAAGCAGACATAGAG
CAGCTGCCGTCATACCGCTTTAACCCTGACAGTCACCAGTCTGAGCAGACGCTGTGTGTGGTCT
GCTTCAGTGACTTCGAGGTGCGGCAGCTGCTCCGAGTTCTCCCCTGCAACCACGAGTTCCATGC
CAAGTGTGTTGACAAGTGGTTGAAGGCCAACCGGACCTGTCCCATTTGCCGGGCGGATGCCTCC
GAGGTGCCCAGGGAGGCCGAGTGAGGCTCCACAGCCACCACAAGAGCCCTGCCCAAAGCTCCGG
AGACGGGTGGGGGGAAGCAGGGAGTGGCCCAGGGAGAACTGTAAGGGAGGGGCCAGGCCTGTCA
GCGTTCCCACCTGCTACTCCAGAGCTGGTGCCAGGGTCAGCCCTGGAGAAGCCCCTGCAATAAG
CCCCTGCGTTTGCCAAGCTCCAAAGACTCCTTCCCCCGTCTGCCTGCCTGCCTGCCTGCCTGCC
CGCCCGCCATGGAGCTGTCTGAGTGTCCCCAACTCAGTCTGCCTCCTAGTTACCCCTGGGTCCT
TCTTCCTGCTGGCTCTGGGAGGCAGGAGTCCATTGCCTGAGTGTGGTGGCTGGTGTGATTCCTC
AGGCCCCAAAACGGGCCAAGGAATGGCCGCCCTGGGTCAACTGGTCTCTTGTACTGAAGTGAAG
TGTTCCTTCCCTGCCCTAGTGTCCTGCCAGGTGTGTGGGCAGAGAGTAGCCAGAGACATTTCCT
CAGTTCTCCTGTTTAACTCCAGACAGACTTAGGCAGTCAGCTCTGCCGCTGTGCGGGGTGGGTC
TGACCCCCAGGACCCTTACTTACCCCAGGCACAGCACTCTAGCCCCCCTCCAGGCTGGAGAGTG
TCCCAGCCAGGCTCCATGAGCAAGTGGGAAGGGGCTCCAACGGATACGTTGTGTTCTGCAGTAG
CCGAGCCACGATCTGGGCATGTCCTTGTGTTTCTGGTGGCTACCCCTTCACCAGTGACAATGTC
AGACCCATGCTCGATCTTCCCCTCTGTCGTTTTGCATGAATGTGAGGAACAGCAGTTTTTGTTT
ATTCATTTGGCCCAAAATTGCGTGTAGGGTGTGGATATTTAAGAGGTGTTTGGTTTTTATTATC
TTGTTTTCCCTTTGGTGTAATAGGAGTGGGGGCATAGGGACCGACCAGGACCAAATGCCCATGG
GGCAGGGTAGGGTCAGGTTGTGCCACACCAGTCCTCCTCATGAGTGTGCGGCTGGGACTGCGCT
GGGTGGCTGGAAGTCACAGGGCAGAGTTGGGGGGTCTGTGCTCAGCTGATAACTGCCATGCACT
GTACTGCACATGTCCCTAGAGCCTCCCGGGACCGGCTGCTTTTCAGGGCATCTCCTCTCCAGCC
AGGGCCTGTGTCCCACCTGCCTGGGTGAGTCTCCTAGCAATCCGGTGAGGACAGGGATCAGGGA
GGGTGTGAACCTCCACCTGGGGGCCCCTCCCAGCCTGATTCCTGCCCTCCAAGGTCTGGAGGAG
GCTGTGTTCCTTACCCTCCCTCCAGGTCCCTTCCCTTTCCCTTCCTACCGCCAACCAACTGGGG
TTGCTGCCCGGAGTGAAGGAACCGCGTGTGGGGCCGGCACATCCTAGCAGGCAGCCATTGGCGC
CTGCTGCCTCAGGGATGCTCCAACCACCCTCCTTCTCACAGCAGCCCTGGCTCCCTGCCTCCCG
CCCCAGCCTGCCAGGGCCCCATTGGCCTGCTCCCATCCCACAAGAACCCAAAGTCTTACTGTAT
ATAACTCCAGGTGATGTTTCTATATTTATAGCAGTGTTGAAAATCCACGTGTTTTACACAGAGA
ACCACCTTCTCCAACCCCCATCCCTTCCTCACCCCAAAAAAGGTTTTCAAACCCTTGTGGTTCC
TGGGGCAGCGGAATCGGCTCATGGATTGTGTCGGCTGCGGTGAGGATTCCAACAAGCAGCTACT
AGGGGGGAATACACCTTTTCTTTTTAATCATTTAAGAAGATTTATGAAGCAATTACTTAGGATG
TTTGTGATTTGCCGACCTTGCTGTAGATGCCATGTTACCAATGATCTCCTGTGGTGGGGGCTGG
CATTGTTTACTCTTTATTTACCAACTTCTGGCCTAGGCATGACAGTGGGCACCTTCCCCAGCAC
TGCTGGGCCAGCGCCTGTGTTCTGTGTTAGAAGGTTTATATATATATAACTGAACACACACACG
CACACATATATAAACACACGTGATTTGGGGGCCCTGTTCCTTGCACATCTTACAGTTACCTCAT
TTTTCCCATGTATGTATTTGAGAAAATGCTAATATATAGAGACAAATGGTTCTTAAAGCTTAAA
TGTGTGGTTTTTCCATCCCATTGGACTCACATTGGTTTGTAGCATTTATCATAACTAGTATGTT
GTACTATATATGTGTATACATTTAACATAACTAGTATGTTGTACTATATATGTGTATACTGATT
GAAATTTTTAACAGATTTGTACTTTTTTTAAAATGAAAGTTGCTAGTTCTGCTTGACCAAGTAG
TGCAATCATTATTTTTTTTAATATTGTTGCTGATTTCAGAGGGATATTCACTAATAAATGTATG
ATGAATA

hide sequence

RefSeq Acc Id:

XM_017600593 ⟹ XP_017456082

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	9,932,897 - 9,939,496 (+)	NCBI
mRatBN7.2	17	9,927,772 - 9,934,376 (+)	NCBI
Rnor_6.0	17	10,465,799 - 10,472,410 (+)	NCBI

Sequence:

show sequence

GTGGGGGTGGGGGCGAATGCTTTAGTCTTATTTCAGAGACTAGGATTTGTAATCTCCCAATGTT
TACTCTGACAACACCCGGTCATTGATGCCAGACTGTGTGCTTTTACATACATACAGTAAAGGCT
TTCTTCAGTGAATCCCACCCCTGCTGAGTGCCTGAACCTGAACAGGTCAGTGACAGAAATGAAT
CCAGGTGGTGTACCCCAGGCCTGTGGCCTTGGCTAGGCACTGTTGGGTAATGTGGAGAAAGCAC
TCTCCTGTTCAGATTGAAGAGTTGGGGCCCAAACTTGGGTAGAGGCAATGGTTCTTGTGATGTT
TGCAGGGATGACTGAGGTGCTTAACTGACACAACGCTCCCTTGCTGTGTCAGCAGGTGGCAGCA
TTTGGACATCAGATGGCCGTAGGTTTGTTGGCTGAGAAAGAGTGGAAAGACCACCTTGTGACAG
TGATGGCAGACGGCTGGCTGGTCCAATGTGATGCTCTTCAGTGTCCCAGGGCCCAGGTTGTGAG
CCCCGGTCCAGCCCCTCCATCTCCCTGCCCTCCTGATGAGGCCATGGGCTCTGGCAGTGACTAA
GTGGCCGCCCTCTGCCCCCGTGGGTCACTGTCGAGTCTCTACGAGACCTAGCAGCAGCCCAGGC
CAGCTCTGGGGAAGCCTTGGCCACGAGGGCCCCCTGGCCAGCCCACCTGCCCAGAATGAGCGCT
TACCCTCCCAGCAGCTGCTGCCCCGACCGCCACACCTCTCTGTAGAGGAGCACCGAGCTTCAGA
AGCTCCTGCCGGCAGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTT
GATCTCCACGACCAGGTGCACCAGGGACCTGTCCCTCTGTCCTACACAGTCACCACAGTGACAA
CCCAAGGCTTCCCTTTGCCTGCAAGCCAACATATCCCTGGCTGCAGTGCCCAGCAGCTCCCAGC
ATGCTCCGTGATGTTCAGTGGGCAGCACTACCCCCTCTGCTGCCTCCCGCCTCCGCAGCTGATC
CAGGCGTGCACCATGCAGCAGCTCCCCGTGCCCTACCACACCTACCCCCACCTCATCTCCAGTG
ACCACTACATCCTTCACCCCCCACCACCGGCCCCGCCGCCCCAACCTACCCACATGGCCCCGCT
TGGGCAGTTTGTATCCCTGCAGACCCAGCACCCACGTATGCCCCTGCAGCGGCTGGACAATGAG
ATGGACCTTCGAGGAGATCAGCACCCCTTGGGTAGCTTTACTTACTCCACCTCTGCCACTGGCC
CCACCTTGTCGCCTTCAGTGCCCCTTCACTACCTACCCCATGATCCACTGCACCAGGAGCTGTC
CTTTGGTGTTCCATATTCCCACATGATGCCACGAAGACTGAGCACACAAAGATACCGCCTGCAA
CAGCCGCTGCCACCACCCCCACCGCCGCCTCCACCATCGTATTACCCAAGCTTCCTCCCCTACT
TCCTTTCAATGCTGCCAATGTCACCAACCACCGTGGGCCCTACCATCAGCCTGGACCTGGATGT
GGATGACGTGGAGATGGAGAACTATGAGGCTCTCCTGAACCTGGCTGAGAGGCTAGGAGATGCC
AAGCCCCGAGGCCTCACCAAAGCAGACATAGAGCAGCTGCCGTCATACCGCTTTAACCCTGACA
GTCACCAGTCTGAGCAGACGCTGTGTGTGGTCTGCTTCAGTGACTTCGAGGTGCGGCAGCTGCT
CCGAGTTCTCCCCTGCAACCACGAGTTCCATGCCAAGTGTGTTGACAAGTGGTTGAAGGCCAAC
CGGACCTGTCCCATTTGCCGGGCGGATGCCTCCGAGGTGCCCAGGGAGGCCGAGTGAGGCTCCA
CAGCCACCACAAGAGCCCTGCCCAAAGCTCCGGAGACGGGTGGGGGGAAGCAGGGAGTGGCCCA
GGGAGAACTGTAAGGGAGGGGCCAGGCCTGTCAGCGTTCCCACCTGCTACTCCAGAGCTGGTGC
CAGGGTCAGCCCTGGAGAAGCCCCTGCAATAAGCCCCTGCGTTTGCCAAGCTCCAAAGACTCCT
TCCCCCGTCTGCCTGCCTGCCTGCCTGCCTGCCCGCCCGCCATGGAGCTGTCTGAGTGTCCCCA
ACTCAGTCTGCCTCCTAGTTACCCCTGGGTCCTTCTTCCTGCTGGCTCTGGGAGGCAGGAGTCC
ATTGCCTGAGTGTGGTGGCTGGTGTGATTCCTCAGGCCCCAAAACGGGCCAAGGAATGGCCGCC
CTGGGTCAACTGGTCTCTTGTACTGAAGTGAAGTGTTCCTTCCCTGCCCTAGTGTCCTGCCAGG
TGTGTGGGCAGAGAGTAGCCAGAGACATTTCCTCAGTTCTCCTGTTTAACTCCAGACAGACTTA
GGCAGTCAGCTCTGCCGCTGTGCGGGGTGGGTCTGACCCCCAGGACCCTTACTTACCCCAGGCA
CAGCACTCTAGCCCCCCTCCAGGCTGGAGAGTGTCCCAGCCAGGCTCCATGAGCAAGTGGGAAG
GGGCTCCAACGGATACGTTGTGTTCTGCAGTAGCCGAGCCACGATCTGGGCATGTCCTTGTGTT
TCTGGTGGCTACCCCTTCACCAGTGACAATGTCAGACCCATGCTCGATCTTCCCCTCTGTCGTT
TTGCATGAATGTGAGGAACAGCAGTTTTTGTTTATTCATTTGGCCCAAAATTGCGTGTAGGGTG
TGGATATTTAAGAGGTGTTTGGTTTTTATTATCTTGTTTTCCCTTTGGTGTAATAGGAGTGGGG
GCATAGGGACCGACCAGGACCAAATGCCCATGGGGCAGGGTAGGGTCAGGTTGTGCCACACCAG
TCCTCCTCATGAGTGTGCGGCTGGGACTGCGCTGGGTGGCTGGAAGTCACAGGGCAGAGTTGGG
GGGTCTGTGCTCAGCTGATAACTGCCATGCACTGTACTGCACATGTCCCTAGAGCCTCCCGGGA
CCGGCTGCTTTTCAGGGCATCTCCTCTCCAGCCAGGGCCTGTGTCCCACCTGCCTGGGTGAGTC
TCCTAGCAATCCGGTGAGGACAGGGATCAGGGAGGGTGTGAACCTCCACCTGGGGGCCCCTCCC
AGCCTGATTCCTGCCCTCCAAGGTCTGGAGGAGGCTGTGTTCCTTACCCTCCCTCCAGGTCCCT
TCCCTTTCCCTTCCTACCGCCAACCAACTGGGGTTGCTGCCCGGAGTGAAGGAACCGCGTGTGG
GGCCGGCACATCCTAGCAGGCAGCCATTGGCGCCTGCTGCCTCAGGGATGCTCCAACCACCCTC
CTTCTCACAGCAGCCCTGGCTCCCTGCCTCCCGCCCCAGCCTGCCAGGGCCCCATTGGCCTGCT
CCCATCCCACAAGAACCCAAAGTCTTACTGTATATAACTCCAGGTGATGTTTCTATATTTATAG
CAGTGTTGAAAATCCACGTGTTTTACACAGAGAACCACCTTCTCCAACCCCCATCCCTTCCTCA
CCCCAAAAAAGGTTTTCAAACCCTTGTGGTTCCTGGGGCAGCGGAATCGGCTCATGGATTGTGT
CGGCTGCGGTGAGGATTCCAACAAGCAGCTACTAGGGGGGAATACACCTTTTCTTTTTAATCAT
TTAAGAAGATTTATGAAGCAATTACTTAGGATGTTTGTGATTTGCCGACCTTGCTGTAGATGCC
ATGTTACCAATGATCTCCTGTGGTGGGGGCTGGCATTGTTTACTCTTTATTTACCAACTTCTGG
CCTAGGCATGACAGTGGGCACCTTCCCCAGCACTGCTGGGCCAGCGCCTGTGTTCTGTGTTAGA
AGGTTTATATATATATAACTGAACACACACACGCACACATATATAAACACACGTGATTTGGGGG
CCCTGTTCCTTGCACATCTTACAGTTACCTCATTTTTCCCATGTATGTATTTGAGAAAATGCTA
ATATATAGAGACAAATGGTTCTTAAAGCTTAAATGTGTGGTTTTTCCATCCCATTGGACTCACA
TTGGTTTGTAGCATTTATCATAACTAGTATGTTGTACTATATATGTGTATACATTTAACATAAC
TAGTATGTTGTACTATATATGTGTATACTGATTGAAATTTTTAACAGATTTGTACTTTTTTTAA
AATGAAAGTTGCTAGTTCTGCTTGACCAAGTAGTGCAATCATTATTTTTTTTAATATTGTTGCT
GATTTCAGAGGGATATTCACTAATAAATGTATGATGAATA

hide sequence

RefSeq Acc Id:

XM_017600594 ⟹ XP_017456083

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	9,925,100 - 9,939,496 (+)	NCBI
mRatBN7.2	17	9,919,982 - 9,934,376 (+)	NCBI
Rnor_6.0	17	10,465,799 - 10,472,410 (+)	NCBI

Sequence:

show sequence

GTGGGGGTGGGGGCGAATGCTTTAGTCTTATTTCAGAGACTAGGATTTGTAATCTCCCAATGTT
TACTCTGACAACACCCGGTCATTGATGCCAGACTGTGTGCTTTTACATACATACAGTAAAGGCT
TTCTTCAGTGAATCCCACCCCTGCTGAGTGCCTGAACCTGAACAGGTCAGTGACAGAAATGAAT
CCAGGTGGTGTACCCCAGGCCTGTGGCCTTGGCTAGGCACTGTTGGGTAATGTGGAGAAAGCAC
TCTCCTGTTCAGATTGAAGAGTTGGGGCCCAAACTTGGGTAGAGGCAATGGTTCTTGTGATGTT
TGCAGGGATGACTGAGGTGCTTAACTGACACAACGCTCCCTTGCTGTGTCAGCAGGTGGCAGCA
TTTGGACATCAGATGGCCGTAGGTTTGTTGGCTGAGAAAGAGTGGAAAGACCACCTTGTGACAG
TGATGGCAGACGGCTGGCTGGTCCAATGTGATGCTCTTCAGTGTCCCAGGGCCCAGTGGGTTTC
AGCATGTTCCTTGCCAAGGCTTCATCCTGACTCTGAGTTAGTTGCAGAAGCCTGAGTGAGATTG
GAGACCCTGCCCTGACCCACCCTTGGGTCTGCCTGGGGTTACAGGACGTGGGCATATACCAGGC
CTGGCATACTGCCAGCCGCAAACTCCTTTCCCAGTCCCTGTGAAGCCGTGAGGTGACCTTCCCC
ATGAGCAGCAGGCTGTAGAGACAGGCTTAAAGTCGCCCAATTCCTAGCTTTGCCATGTGGAACA
TAGGACAGTGAGTCTCTCTGCTAAAAGCTTTCCTTAATTAGTGGAGTCACCGAGTGTGCATTAG
AGGGAAGGGCTCAGGAGAAAGAGAACCACGTCTGGCCTCAGCCAAGTCCCGAGAGTGGGAAGCA
GGTCAGACTGCCTTATATAGCCTGTTAGAGGGAAGTCGAGTCCCAGGTCACTTTGGAGTTCCTC
TTCAGCCAGCCACATGAAAGGGAAACCTGAAGCTCCCCCAACCCCAAAAGCTGCAGCTGCCTAG
TCAGCCCCTGTCATGCGGCAGCGAAGGAGCTTTTCTCTAGCCTGCCCCTCACTCGAGCCAGCCG
GCCCTGAAGCACACTAGTCTGGTCTCTGAATTTACCATAGTCTAAGGAGATTTGATCCCATTTC
CCAGAACAGGAAACCAAGACTAGCGTGTTAGCGTTAGATCCCAGGCTTCAGAGAGGGATGGACC
TGTCCTGTCCGGGTTTTATCCATTTCCCAGTTCTTAATTATACAAGCAACTGGATTTTTCTATC
CCTCCACATCTTTCTCTAATTGCCTCCTAGGGTTGTGAGCCCCGGTCCAGCCCCTCCATCTCCC
TGCCCTCCTGATGAGGCCATGGGCTCTGGCAGTGACTAAGTGGCCGCCCTCTGCCCCCGTGGGT
CACTGTCGAGTCTCTACGAGACCTAGCAGCAGCCCAGGCCAGCTCTGGGGAAGCCTTGGCCACG
AGGGCCCCCTGGCCAGCCCACCTGCCCAGAATGAGCGCTTACCCTCCCAGCAGCTGCTGCCCCG
ACCGCCACACCTCTCTGTAGAGGAGCACCGAGCTTCAGAAGCTCCTGCCGGCAGGAGCCCCCGA
ATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGACCAGGTGCACCAGG
GACCTGTCCCTCTGTCCTACACAGTCACCACAGTGACAACCCAAGGCTTCCCTTTGCCTGCAAG
CCAACATATCCCTGGCTGCAGTGCCCAGCAGCTCCCAGCATGCTCCGTGATGTTCAGTGGGCAG
CACTACCCCCTCTGCTGCCTCCCGCCTCCGCTGATCCAGGCGTGCACCATGCAGCAGCTCCCCG
TGCCCTACCACACCTACCCCCACCTCATCTCCAGTGACCACTACATCCTTCACCCCCCACCACC
GGCCCCGCCGCCCCAACCTACCCACATGGCCCCGCTTGGGCAGTTTGTATCCCTGCAGACCCAG
CACCCACGTATGCCCCTGCAGCGGCTGGACAATGAGATGGACCTTCGAGGAGATCAGCACCCCT
TGGGTAGCTTTACTTACTCCACCTCTGCCACTGGCCCCACCTTGTCGCCTTCAGTGCCCCTTCA
CTACCTACCCCATGATCCACTGCACCAGGAGCTGTCCTTTGGTGTTCCATATTCCCACATGATG
CCACGAAGACTGAGCACACAAAGATACCGCCTGCAACAGCCGCTGCCACCACCCCCACCGCCGC
CTCCACCATCGTATTACCCAAGCTTCCTCCCCTACTTCCTTTCAATGCTGCCAATGTCACCAAC
CACCGTGGGCCCTACCATCAGCCTGGACCTGGATGTGGATGACGTGGAGATGGAGAACTATGAG
GCTCTCCTGAACCTGGCTGAGAGGCTAGGAGATGCCAAGCCCCGAGGCCTCACCAAAGCAGACA
TAGAGCAGCTGCCGTCATACCGCTTTAACCCTGACAGTCACCAGTCTGAGCAGACGCTGTGTGT
GGTCTGCTTCAGTGACTTCGAGGTGCGGCAGCTGCTCCGAGTTCTCCCCTGCAACCACGAGTTC
CATGCCAAGTGTGTTGACAAGTGGTTGAAGGCCAACCGGACCTGTCCCATTTGCCGGGCGGATG
CCTCCGAGGTGCCCAGGGAGGCCGAGTGAGGCTCCACAGCCACCACAAGAGCCCTGCCCAAAGC
TCCGGAGACGGGTGGGGGGAAGCAGGGAGTGGCCCAGGGAGAACTGTAAGGGAGGGGCCAGGCC
TGTCAGCGTTCCCACCTGCTACTCCAGAGCTGGTGCCAGGGTCAGCCCTGGAGAAGCCCCTGCA
ATAAGCCCCTGCGTTTGCCAAGCTCCAAAGACTCCTTCCCCCGTCTGCCTGCCTGCCTGCCTGC
CTGCCCGCCCGCCATGGAGCTGTCTGAGTGTCCCCAACTCAGTCTGCCTCCTAGTTACCCCTGG
GTCCTTCTTCCTGCTGGCTCTGGGAGGCAGGAGTCCATTGCCTGAGTGTGGTGGCTGGTGTGAT
TCCTCAGGCCCCAAAACGGGCCAAGGAATGGCCGCCCTGGGTCAACTGGTCTCTTGTACTGAAG
TGAAGTGTTCCTTCCCTGCCCTAGTGTCCTGCCAGGTGTGTGGGCAGAGAGTAGCCAGAGACAT
TTCCTCAGTTCTCCTGTTTAACTCCAGACAGACTTAGGCAGTCAGCTCTGCCGCTGTGCGGGGT
GGGTCTGACCCCCAGGACCCTTACTTACCCCAGGCACAGCACTCTAGCCCCCCTCCAGGCTGGA
GAGTGTCCCAGCCAGGCTCCATGAGCAAGTGGGAAGGGGCTCCAACGGATACGTTGTGTTCTGC
AGTAGCCGAGCCACGATCTGGGCATGTCCTTGTGTTTCTGGTGGCTACCCCTTCACCAGTGACA
ATGTCAGACCCATGCTCGATCTTCCCCTCTGTCGTTTTGCATGAATGTGAGGAACAGCAGTTTT
TGTTTATTCATTTGGCCCAAAATTGCGTGTAGGGTGTGGATATTTAAGAGGTGTTTGGTTTTTA
TTATCTTGTTTTCCCTTTGGTGTAATAGGAGTGGGGGCATAGGGACCGACCAGGACCAAATGCC
CATGGGGCAGGGTAGGGTCAGGTTGTGCCACACCAGTCCTCCTCATGAGTGTGCGGCTGGGACT
GCGCTGGGTGGCTGGAAGTCACAGGGCAGAGTTGGGGGGTCTGTGCTCAGCTGATAACTGCCAT
GCACTGTACTGCACATGTCCCTAGAGCCTCCCGGGACCGGCTGCTTTTCAGGGCATCTCCTCTC
CAGCCAGGGCCTGTGTCCCACCTGCCTGGGTGAGTCTCCTAGCAATCCGGTGAGGACAGGGATC
AGGGAGGGTGTGAACCTCCACCTGGGGGCCCCTCCCAGCCTGATTCCTGCCCTCCAAGGTCTGG
AGGAGGCTGTGTTCCTTACCCTCCCTCCAGGTCCCTTCCCTTTCCCTTCCTACCGCCAACCAAC
TGGGGTTGCTGCCCGGAGTGAAGGAACCGCGTGTGGGGCCGGCACATCCTAGCAGGCAGCCATT
GGCGCCTGCTGCCTCAGGGATGCTCCAACCACCCTCCTTCTCACAGCAGCCCTGGCTCCCTGCC
TCCCGCCCCAGCCTGCCAGGGCCCCATTGGCCTGCTCCCATCCCACAAGAACCCAAAGTCTTAC
TGTATATAACTCCAGGTGATGTTTCTATATTTATAGCAGTGTTGAAAATCCACGTGTTTTACAC
AGAGAACCACCTTCTCCAACCCCCATCCCTTCCTCACCCCAAAAAAGGTTTTCAAACCCTTGTG
GTTCCTGGGGCAGCGGAATCGGCTCATGGATTGTGTCGGCTGCGGTGAGGATTCCAACAAGCAG
CTACTAGGGGGGAATACACCTTTTCTTTTTAATCATTTAAGAAGATTTATGAAGCAATTACTTA
GGATGTTTGTGATTTGCCGACCTTGCTGTAGATGCCATGTTACCAATGATCTCCTGTGGTGGGG
GCTGGCATTGTTTACTCTTTATTTACCAACTTCTGGCCTAGGCATGACAGTGGGCACCTTCCCC
AGCACTGCTGGGCCAGCGCCTGTGTTCTGTGTTAGAAGGTTTATATATATATAACTGAACACAC
ACACGCACACATATATAAACACACGTGATTTGGGGGCCCTGTTCCTTGCACATCTTACAGTTAC
CTCATTTTTCCCATGTATGTATTTGAGAAAATGCTAATATATAGAGACAAATGGTTCTTAAAGC
TTAAATGTGTGGTTTTTCCATCCCATTGGACTCACATTGGTTTGTAGCATTTATCATAACTAGT
ATGTTGTACTATATATGTGTATACATTTAACATAACTAGTATGTTGTACTATATATGTGTATAC
TGATTGAAATTTTTAACAGATTTGTACTTTTTTTAAAATGAAAGTTGCTAGTTCTGCTTGACCA
AGTAGTGCAATCATTATTTTTTTTAATATTGTTGCTGATTTCAGAGGGATATTCACTAATAAAT
GTATGATGAATA

hide sequence

RefSeq Acc Id:

XM_039095850 ⟹ XP_038951778

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	9,934,190 - 9,939,496 (+)	NCBI
mRatBN7.2	17	9,920,024 - 9,934,376 (+)	NCBI

RefSeq Acc Id:

XM_063276555 ⟹ XP_063132625

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	9,932,897 - 9,939,496 (+)	NCBI

RefSeq Acc Id:

XM_063276556 ⟹ XP_063132626

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	9,930,417 - 9,939,496 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001019966	(Get FASTA)	NCBI Sequence Viewer
	NP_001430755	(Get FASTA)	NCBI Sequence Viewer
	NP_001430756	(Get FASTA)	NCBI Sequence Viewer
	XP_006253695	(Get FASTA)	NCBI Sequence Viewer
	XP_006253696	(Get FASTA)	NCBI Sequence Viewer
	XP_006253699	(Get FASTA)	NCBI Sequence Viewer
	XP_006253706	(Get FASTA)	NCBI Sequence Viewer
	XP_017456082	(Get FASTA)	NCBI Sequence Viewer
	XP_017456083	(Get FASTA)	NCBI Sequence Viewer
	XP_038951778	(Get FASTA)	NCBI Sequence Viewer
	XP_063132625	(Get FASTA)	NCBI Sequence Viewer
	XP_063132626	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH98030	(Get FASTA)	NCBI Sequence Viewer
	EDL94033	(Get FASTA)	NCBI Sequence Viewer
	EDL94034	(Get FASTA)	NCBI Sequence Viewer
	EDL94035	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000057548
	ENSRNOP00000068768
GenBank Protein	Q4V7B8	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001019966 ⟸ NM_001024795

- UniProtKB:

Q4V7B8 (UniProtKB/Swiss-Prot), A6KAX7 (UniProtKB/TrEMBL), A0A8I6ANS6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLHPATQQSPFMVDLHDQVHQGPVPLSYTVTTVTTQGFPLPASQHIPGCSAQQLPACSVMFSGQ
HYPLCCLPPPLIQACTMQQLPVPYHTYPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQTQ
HPRMPLQRLDNEMDLRGDQHPLGSFTYSTSATGPTLSPSVPLHYLPHDPLHQELSFGVPYSHMM
PRRLSTQRYRLQQPLPPPPPPPPPSYYPSFLPYFLSMLPMSPTTVGPTISLDLDVDDVEMENYE
ALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEF
HAKCVDKWLKANRTCPICRADASEVPREAE

hide sequence

RefSeq Acc Id:	XP_006253696 ⟸ XM_006253634
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JTM4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRPWALAVTKWPPSAPVGHCRVSTRPSSSPGQLWGSLGHEGPLASPPAQNERLPSQQLLPRPPH LSVEEHRASEAPAGRSPRMLHPATQQSPFMVDLHDQVHQGPVPLSYTVTTVTTQGFPLPASQHI PGCSAQQLPACSVMFSGQHYPLCCLPPPQLIQACTMQQLPVPYHTYPHLISSDHYILHPPPPAP PPQPTHMAPLGQFVSLQTQHPRMPLQRLDNEMDLRGDQHPLGSFTYSTSATGPTLSPSVPLHYL PHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPSYYPSFLPYFLSMLPMSPTTV GPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVC FSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVPREAE hide sequence

RefSeq Acc Id:	XP_006253706 ⟸ XM_006253644
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2JTM4 (UniProtKB/TrEMBL), A0A8L2QTU2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLHPATQQSPFMVDLHDQVHQGPVPLSYTVTTVTTQGFPLPASQHIPGCSAQQLPACSVMFSGQ HYPLCCLPPPQLIQACTMQQLPVPYHTYPHLISSDHYILHPPPPAPPPQPTHMAPLGQFVSLQT QHPRMPLQRLDNEMDLRGDQHPLGSFTYSTSATGPTLSPSVPLHYLPHDPLHQELSFGVPYSHM MPRRLSTQRYRLQQPLPPPPPPPPPSYYPSFLPYFLSMLPMSPTTVGPTISLDLDVDDVEMENY EALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHE FHAKCVDKWLKANRTCPICRADASEVPREAE hide sequence

RefSeq Acc Id:	XP_006253695 ⟸ XM_006253633
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JTM4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRPWALAVTKWPPSAPVGHCRVSTRPSSSPGQLWGSLGHEGPLASPPAQNERLPSQQLLPRPPH LSVEEHRASEAPAGRSPRMLHPATQQSPFMVDLHDQVHQGPVPLSYTVTTVTTQGFPLPASQHI PGCSAQQLPACSVMFSGQHYPLCCLPPPQLIQACTMQQLPVPYHTYPHLISSDHYILHPPPPAP PPQPTHMAPLGQFVSLQTQHPRMPLQRLDNEMDLRGDQHPLGSFTYSTSATGPTLSPSVPLHYL PHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPSYYPSFLPYFLSMLPMSPTTV GPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVC FSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVPREAE hide sequence

RefSeq Acc Id:	XP_006253699 ⟸ XM_006253637
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JTM4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRPWALAVTKWPPSAPVGHCRVSTRPSSSPGQLWGSLGHEGPLASPPAQNERLPSQQLLPRPPH LSVEEHRASEAPAGRSPRMLHPATQQSPFMVDLHDQVHQGPVPLSYTVTTVTTQGFPLPASQHI PGCSAQQLPACSVMFSGQHYPLCCLPPPQLIQACTMQQLPVPYHTYPHLISSDHYILHPPPPAP PPQPTHMAPLGQFVSLQTQHPRMPLQRLDNEMDLRGDQHPLGSFTYSTSATGPTLSPSVPLHYL PHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPSYYPSFLPYFLSMLPMSPTTV GPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVC FSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVPREAE hide sequence

RefSeq Acc Id:	XP_017456083 ⟸ XM_017600594
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6ANS6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRPWALAVTKWPPSAPVGHCRVSTRPSSSPGQLWGSLGHEGPLASPPAQNERLPSQQLLPRPPH LSVEEHRASEAPAGRSPRMLHPATQQSPFMVDLHDQVHQGPVPLSYTVTTVTTQGFPLPASQHI PGCSAQQLPACSVMFSGQHYPLCCLPPPLIQACTMQQLPVPYHTYPHLISSDHYILHPPPPAPP PQPTHMAPLGQFVSLQTQHPRMPLQRLDNEMDLRGDQHPLGSFTYSTSATGPTLSPSVPLHYLP HDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPSYYPSFLPYFLSMLPMSPTTVG PTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCF SDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVPREAE hide sequence

RefSeq Acc Id:	XP_017456082 ⟸ XM_017600593
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JTM4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRPWALAVTKWPPSAPVGHCRVSTRPSSSPGQLWGSLGHEGPLASPPAQNERLPSQQLLPRPPH LSVEEHRASEAPAGRSPRMLHPATQQSPFMVDLHDQVHQGPVPLSYTVTTVTTQGFPLPASQHI PGCSAQQLPACSVMFSGQHYPLCCLPPPQLIQACTMQQLPVPYHTYPHLISSDHYILHPPPPAP PPQPTHMAPLGQFVSLQTQHPRMPLQRLDNEMDLRGDQHPLGSFTYSTSATGPTLSPSVPLHYL PHDPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPPPSYYPSFLPYFLSMLPMSPTTV GPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVC FSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVPREAE hide sequence

Ensembl Acc Id:

ENSRNOP00000057548 ⟸ ENSRNOT00000060822

Ensembl Acc Id:

ENSRNOP00000068768 ⟸ ENSRNOT00000089885

RefSeq Acc Id:	XP_038951778 ⟸ XM_039095850
- Peptide Label:	isoform X3
- UniProtKB:	A0A8L2QTU2 (UniProtKB/TrEMBL), A0A0G2JTM4 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000094910 ⟸ ENSRNOT00000100371

RefSeq Acc Id:	XP_063132626 ⟸ XM_063276556
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6ANS6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063132625 ⟸ XM_063276555
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JTM4 (UniProtKB/TrEMBL)

Protein Domains

RING-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q4V7B8-F1-model_v2	AlphaFold	Q4V7B8	1-350	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13700327

Promoter ID:

EPDNEW_R10842

Type:

initiation region

Name:

Rnf44_1

Description:

ring finger protein 44

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	17	10,458,080 - 10,458,140	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307212	AgrOrtholog
BioCyc Gene	G2FUF-10178	BioCyc
Ensembl Genes	ENSRNOG00000017641	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000060822	ENTREZGENE
	ENSRNOT00000089885	ENTREZGENE
Gene3D-CATH	3.30.40.10	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7456296	IMAGE-MGC_LOAD
InterPro	Znf_RING	UniProtKB/Swiss-Prot
	Znf_RING/FYVE/PHD	UniProtKB/Swiss-Prot
KEGG Report	rno:361212	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:116184	IMAGE-MGC_LOAD
NCBI Gene	361212	ENTREZGENE
PANTHER	GH10160P	UniProtKB/Swiss-Prot
	RING FINGER PROTEIN 44	UniProtKB/Swiss-Prot
Pfam	zf-RING_2	UniProtKB/Swiss-Prot
PhenoGen	Rnf44	PhenoGen
PROSITE	ZF_RING_2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000017641	RatGTEx
SMART	RING	UniProtKB/Swiss-Prot
Superfamily-SCOP	RING/U-box	UniProtKB/Swiss-Prot
UniProt	A0A0G2JTM4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6ANS6	ENTREZGENE
	A0A8L2QTU2	ENTREZGENE
	A6KAX7	ENTREZGENE, UniProtKB/TrEMBL
	Q4V7B8	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-12-06	Rnf44	ring finger protein 44	Rnf44_predicted	ring finger protein 44 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Rnf44_predicted	ring finger protein 44 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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