Slc39a14 (solute carrier family 39 member 14) - Rat Genome Database

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Gene: Slc39a14 (solute carrier family 39 member 14) Rattus norvegicus
Analyze
Symbol: Slc39a14
Name: solute carrier family 39 member 14
RGD ID: 1307026
Description: Predicted to enable monoatomic cation transmembrane transporter activity. Predicted to be involved in several processes, including cellular response to glucose stimulus; intracellular zinc ion homeostasis; and transition metal ion transport. Predicted to act upstream of or within iron ion transport and zinc ion transport. Predicted to be located in apical plasma membrane; basolateral plasma membrane; and bounding membrane of organelle. Predicted to be active in plasma membrane. Human ortholog(s) of this gene implicated in hypermanganesemia with dystonia 2. Orthologous to human SLC39A14 (solute carrier family 39 member 14); PARTICIPATES IN iron uptake pathway; INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,2',5,5'-tetrachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC306009; metal cation symporter ZIP14; solute carrier family 39 (zinc transporter), member 14; zinc transporter ZIP14
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81551,786,517 - 51,833,260 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1551,786,623 - 51,833,229 (-)EnsemblGRCr8
mRatBN7.21545,376,806 - 45,423,549 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1545,376,917 - 45,423,524 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1549,494,780 - 49,541,394 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01550,606,267 - 50,652,883 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01547,465,592 - 47,512,197 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01551,982,872 - 52,029,841 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1551,982,982 - 52,029,816 (-)Ensemblrn6Rnor6.0
Rnor_5.01555,707,497 - 55,752,631 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41550,703,198 - 50,749,644 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1545,056,455 - 45,103,098 (-)NCBICelera
RGSC_v3.11550,721,996 - 50,738,831 (-)NCBI
Cytogenetic Map15p11NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
1,3-dicyclohexylcarbodiimide  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-dinitrotoluene  (EXP)
2-bromohexadecanoic acid  (ISO)
2-methylcholine  (ISO)
3,3',4,4'-tetrachlorobiphenyl  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
acetamide  (EXP)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (EXP)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
Azoxymethane  (ISO)
benzo[a]pyrene  (ISO)
benzo[e]pyrene  (ISO)
beta-naphthoflavone  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
cadmium atom  (EXP,ISO)
cadmium dichloride  (EXP,ISO)
calcitriol  (ISO)
cannabidiol  (ISO)
carbon nanotube  (ISO)
chloroethene  (ISO)
cisplatin  (ISO)
cobalt atom  (ISO)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
coumarin  (ISO)
cyclophosphamide  (EXP)
cyclosporin A  (ISO)
DDE  (ISO)
dextran sulfate  (ISO)
dibenz[a,h]anthracene  (ISO)
Dibutyl phosphate  (ISO)
diclofenac  (ISO)
diethyl maleate  (ISO)
dioxygen  (ISO)
diquat  (ISO)
dorsomorphin  (ISO)
endosulfan  (EXP)
entinostat  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
folic acid  (ISO)
FR900359  (ISO)
glafenine  (EXP)
hexane  (ISO)
indometacin  (EXP)
inulin  (ISO)
iron atom  (ISO)
iron(0)  (ISO)
isoniazide  (ISO)
isotretinoin  (ISO)
lead diacetate  (EXP)
lead(0)  (EXP)
lipopolysaccharide  (ISO)
maneb  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
menadione  (ISO)
methapyrilene  (EXP,ISO)
methimazole  (EXP)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
motexafin gadolinium  (ISO)
N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine  (ISO)
N-acetyl-L-cysteine  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
nickel atom  (ISO)
ochratoxin A  (ISO)
okadaic acid  (ISO)
oxaliplatin  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP,ISO)
PCB138  (EXP)
perfluorohexanesulfonic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenacetin  (EXP)
phenobarbital  (ISO)
phenylhydrazine  (EXP)
pirinixic acid  (ISO)
progesterone  (ISO)
quercetin  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
senecionine  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (EXP)
sulfadimethoxine  (EXP)
sunitinib  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (EXP,ISO)
tetrachloromethane  (ISO)
thiram  (ISO)
titanium dioxide  (ISO)
topotecan  (EXP)
trichloroethene  (EXP)
triclosan  (ISO)
triphenyl phosphate  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
trovafloxacin  (ISO)
tunicamycin  (ISO)
valproic acid  (ISO)
vancomycin  (ISO)
zidovudine  (ISO)
zinc acetate  (ISO)
zinc atom  (ISO)
zinc dichloride  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Regulators of Iron Homeostasis: New Players in Metabolism, Cell Death, and Disease. Bogdan AR, etal., Trends Biochem Sci. 2016 Mar;41(3):274-86. doi: 10.1016/j.tibs.2015.11.012. Epub 2015 Dec 23.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Cellular iron uptake, trafficking and metabolism: Key molecules and mechanisms and their roles in disease. Lane DJ, etal., Biochim Biophys Acta. 2015 May;1853(5):1130-44. doi: 10.1016/j.bbamcr.2015.01.021. Epub 2015 Feb 4.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:15642354   PMID:16950869   PMID:18270315   PMID:20682781   PMID:21445361   PMID:21653899   PMID:21917916   PMID:22571646   PMID:25007852   PMID:27231142   PMID:27703010   PMID:27785531  
PMID:28536273   PMID:29621230   PMID:31028174   PMID:31699897  


Genomics

Comparative Map Data
Slc39a14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81551,786,517 - 51,833,260 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1551,786,623 - 51,833,229 (-)EnsemblGRCr8
mRatBN7.21545,376,806 - 45,423,549 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1545,376,917 - 45,423,524 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1549,494,780 - 49,541,394 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01550,606,267 - 50,652,883 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01547,465,592 - 47,512,197 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01551,982,872 - 52,029,841 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1551,982,982 - 52,029,816 (-)Ensemblrn6Rnor6.0
Rnor_5.01555,707,497 - 55,752,631 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41550,703,198 - 50,749,644 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1545,056,455 - 45,103,098 (-)NCBICelera
RGSC_v3.11550,721,996 - 50,738,831 (-)NCBI
Cytogenetic Map15p11NCBI
SLC39A14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38822,367,278 - 22,434,129 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl822,366,727 - 22,434,129 (+)Ensemblhg38GRCh38
GRCh37822,224,791 - 22,291,642 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36822,280,737 - 22,336,143 (+)NCBIBuild 36Build 36hg18NCBI36
Celera821,186,754 - 21,253,275 (+)NCBICelera
Cytogenetic Map8p21.3NCBI
HuRef820,766,860 - 20,833,952 (+)NCBIHuRef
CHM1_1822,426,738 - 22,493,738 (+)NCBICHM1_1
T2T-CHM13v2.0822,641,238 - 22,707,959 (+)NCBIT2T-CHM13v2.0
Slc39a14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391470,540,916 - 70,588,873 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1470,540,918 - 70,588,874 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381470,303,467 - 70,351,452 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1470,303,469 - 70,351,425 (-)Ensemblmm10GRCm38
MGSCv371470,703,274 - 70,751,231 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361469,038,547 - 69,086,505 (-)NCBIMGSCv36mm8
Celera1467,844,935 - 67,892,707 (-)NCBICelera
Cytogenetic Map14D2NCBI
cM Map1436.32NCBI
Slc39a14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540345,827,942 - 45,867,309 (+)Ensembl
ChiLan1.0NW_00495540345,828,247 - 45,867,309 (+)NCBIChiLan1.0ChiLan1.0
SLC39A14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2740,874,344 - 40,929,610 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1816,599,597 - 16,654,820 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0821,617,529 - 21,672,726 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1818,555,894 - 18,610,606 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl818,555,895 - 18,621,510 (+)EnsemblpanPan2panpan1.1
SLC39A14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12534,854,371 - 34,901,030 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2534,846,653 - 34,869,695 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2535,443,359 - 35,490,017 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02535,064,234 - 35,111,050 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2535,055,363 - 35,111,056 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12535,010,469 - 35,057,085 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02534,864,496 - 34,911,061 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02535,019,411 - 35,066,227 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Slc39a14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244053647 - 9,308 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049390451 - 9,335 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049390451 - 7,491 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC39A14
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl146,639,206 - 6,687,924 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1146,639,485 - 6,687,929 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2147,073,522 - 7,120,393 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC39A14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1820,446,756 - 20,502,585 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605221,729,303 - 21,788,987 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc39a14
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475817,912,827 - 17,953,294 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462475817,911,889 - 17,954,870 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Slc39a14
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11253,997,645 - 54,044,196 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Slc39a14
424 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:438
Count of miRNA genes:251
Interacting mature miRNAs:319
Transcripts:ENSRNOT00000013067
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300144Rf23Renal function QTL 233.61renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)1544806773104695021Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15231575953331089Rat
152025253Hrtrt24Heart rate QTL 243.82heart pumping trait (VT:2000009)153185580392671517Rat
1582227Gluco30Glucose level QTL 303.60.0003blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)154367724488677244Rat
10054130Srcrt8Stress Responsive Cort QTL 82.180.0085blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)152852773273527732Rat
1582228Epfw3Epididymal fat weight QTL 34.10.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)154367724488677244Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)1525285835104695021Rat
2324620Coatc3Coat color QTL 3coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)152233635152597086Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)1525285835104695021Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151915576287086765Rat
1598828Glom14Glomerulus QTL 142.5kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)154046315285463152Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151492659471614418Rat
631550Bw7Body weight QTL 73.6body mass (VT:0001259)body weight (CMO:0000012)152233635167336351Rat
1582242Gluco28Glucose level QTL 283.30.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)154367724488677244Rat
2306968Anxrr23Anxiety related response QTL 234.83reflex trait (VT:0001961)amplitude of the acoustic startle response (CMO:0001520)154480677352597086Rat
1582244Bw79Body weight QTL 7940.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)154367724488677244Rat
1578660Bss19Bone structure and strength QTL 194.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)1525285835104695021Rat
7411725Strs7Sensitivity to stroke QTL 73.8cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)154446544756583797Rat
1582214Stl21Serum triglyceride level QTL 213.10.022blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)154367724488677244Rat

Markers in Region
RH139853  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21545,376,996 - 45,377,181 (+)MAPPERmRatBN7.2
Rnor_6.01551,983,062 - 51,983,246NCBIRnor6.0
Rnor_5.01555,707,687 - 55,707,871UniSTSRnor5.0
RGSC_v3.41550,703,278 - 50,703,462UniSTSRGSC3.4
Celera1545,056,535 - 45,056,719UniSTS
Cytogenetic Map15p11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 162 91 90 59 91 59 6 355 191 11 141 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000013067   ⟹   ENSRNOP00000013066
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1551,786,623 - 51,833,229 (-)Ensembl
mRatBN7.2 Ensembl1545,376,917 - 45,423,524 (-)Ensembl
Rnor_6.0 Ensembl1551,982,982 - 52,029,816 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000105917   ⟹   ENSRNOP00000091533
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1551,786,623 - 51,833,229 (-)Ensembl
mRatBN7.2 Ensembl1545,376,917 - 45,423,524 (-)Ensembl
RefSeq Acc Id: NM_001107275   ⟹   NP_001100745
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81551,786,623 - 51,833,229 (-)NCBI
mRatBN7.21545,376,917 - 45,423,524 (-)NCBI
Rnor_6.01551,982,982 - 52,029,816 (-)NCBI
Rnor_5.01555,707,497 - 55,752,631 (-)NCBI
RGSC_v3.41550,703,198 - 50,749,644 (-)RGD
Celera1545,056,455 - 45,103,098 (-)RGD
Sequence:
RefSeq Acc Id: XM_006252270   ⟹   XP_006252332
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81551,786,517 - 51,833,260 (-)NCBI
mRatBN7.21545,376,806 - 45,423,549 (-)NCBI
Rnor_6.01551,982,872 - 52,029,841 (-)NCBI
Rnor_5.01555,707,497 - 55,752,631 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039093343   ⟹   XP_038949271
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81551,786,517 - 51,833,236 (-)NCBI
mRatBN7.21545,376,806 - 45,423,546 (-)NCBI
RefSeq Acc Id: XM_039093346   ⟹   XP_038949274
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81551,786,517 - 51,833,248 (-)NCBI
mRatBN7.21545,376,806 - 45,423,543 (-)NCBI
RefSeq Acc Id: XM_039093347   ⟹   XP_038949275
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81551,786,517 - 51,810,542 (-)NCBI
mRatBN7.21545,376,806 - 45,398,808 (-)NCBI
RefSeq Acc Id: XM_063274299   ⟹   XP_063130369
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81551,786,517 - 51,810,958 (-)NCBI
RefSeq Acc Id: XM_063274301   ⟹   XP_063130371
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81551,786,517 - 51,801,107 (-)NCBI
RefSeq Acc Id: NP_001100745   ⟸   NM_001107275
- Peptide Label: precursor
- UniProtKB: D3ZZM0 (UniProtKB/TrEMBL),   A6HTK2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006252332   ⟸   XM_006252270
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ABU1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000013066   ⟸   ENSRNOT00000013067
RefSeq Acc Id: XP_038949271   ⟸   XM_039093343
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ABU1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038949274   ⟸   XM_039093346
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ABU1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038949275   ⟸   XM_039093347
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ABU1 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000091533   ⟸   ENSRNOT00000105917
RefSeq Acc Id: XP_063130369   ⟸   XM_063274299
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ABU1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063130371   ⟸   XM_063274301
- Peptide Label: isoform X2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZZM0-F1-model_v2 AlphaFold D3ZZM0 1-490 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699807
Promoter ID:EPDNEW_R10330
Type:initiation region
Name:Slc39a14_1
Description:solute carrier family 39 member 14
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01552,029,814 - 52,029,874EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1307026 AgrOrtholog
BioCyc Gene G2FUF-13228 BioCyc
Ensembl Genes ENSRNOG00000009832 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000013067 ENTREZGENE
  ENSRNOT00000013067.5 UniProtKB/TrEMBL
  ENSRNOT00000105917 ENTREZGENE
  ENSRNOT00000105917.2 UniProtKB/TrEMBL
InterPro ZIP UniProtKB/TrEMBL
  ZIP_Transporter UniProtKB/TrEMBL
KEGG Report rno:306009 UniProtKB/TrEMBL
NCBI Gene 306009 ENTREZGENE
PANTHER METAL CATION SYMPORTER ZIP14 UniProtKB/TrEMBL
  SOLUTE CARRIER FAMILY 39 UniProtKB/TrEMBL
Pfam Zip UniProtKB/TrEMBL
PhenoGen Slc39a14 PhenoGen
RatGTEx ENSRNOG00000009832 RatGTEx
UniProt A0A8I6ABU1 ENTREZGENE, UniProtKB/TrEMBL
  A6HTK2 ENTREZGENE, UniProtKB/TrEMBL
  D3ZZM0 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-24 Slc39a14  solute carrier family 39 member 14  Slc39a14  solute carrier family 39 (zinc transporter), member 14  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Slc39a14  solute carrier family 39 (zinc transporter), member 14   Slc39a14_predicted  solute carrier family 39 (zinc transporter), member 14 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Slc39a14_predicted  solute carrier family 39 (zinc transporter), member 14 (predicted)      Symbol and Name status set to approved 70820 APPROVED