Pgls (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 16 | 18,334,299 - 18,339,785 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 16 | 18,300,317 - 18,305,803 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 16 | 18,300,317 - 18,305,803 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 16 | 18,351,215 - 18,356,701 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 16 | 19,483,253 - 19,488,771 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 16 | 18,404,153 - 18,409,639 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 16 | 20,020,444 - 20,025,930 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 16 | 20,020,444 - 20,025,930 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 16 | 19,880,872 - 19,886,358 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 16 | 18,791,241 - 18,796,727 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 16 | 18,792,185 - 18,796,720 (+) | NCBI | | | | | Celera | 16 | 18,504,223 - 18,509,709 (+) | NCBI | | Celera | | | Cytogenetic Map | 16 | p14 | NCBI | | | | |
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PGLS (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 19 | 17,511,649 - 17,521,288 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 19 | 17,511,636 - 17,521,288 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 19 | 17,622,458 - 17,632,097 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 19 | 17,483,432 - 17,493,097 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 19 | 17,483,431 - 17,493,095 | NCBI | | | | | Celera | 19 | 17,524,049 - 17,533,713 (+) | NCBI | | Celera | | | Cytogenetic Map | 19 | p13.11 | NCBI | | | | | HuRef | 19 | 17,187,513 - 17,197,177 (+) | NCBI | | HuRef | | | CHM1_1 | 19 | 17,621,814 - 17,631,479 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 19 | 17,646,286 - 17,655,924 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Pgls (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 8 | 72,044,828 - 72,048,911 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 8 | 72,044,820 - 72,053,736 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 8 | 71,592,184 - 71,596,267 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 8 | 71,592,176 - 71,601,092 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 8 | 74,116,083 - 74,120,166 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 8 | 74,521,173 - 74,525,256 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 8 | 74,106,490 - 74,110,576 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | B3.3 | NCBI | | | | | cM Map | 8 | 34.43 | NCBI | | | | |
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Pgls (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955524 | 793,239 - 801,107 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955524 | 797,439 - 801,070 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PGLS (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 20 | 22,377,115 - 22,391,692 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 19 | 21,388,521 - 21,398,262 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 19 | 16,998,851 - 17,008,558 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 19 | 17,971,544 - 17,980,431 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 19 | 17,971,544 - 17,980,431 (+) | Ensembl | panpan1.1 | | panPan2 | |
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PGLS (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 20 | 45,293,970 - 45,301,074 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 20 | 45,294,008 - 45,301,038 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 20 | 45,207,544 - 45,214,627 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 20 | 45,780,537 - 45,787,620 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 20 | 45,780,575 - 45,787,605 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 20 | 45,017,038 - 45,024,121 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 20 | 45,427,118 - 45,434,200 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 20 | 45,703,163 - 45,710,245 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Pgls (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405118 | 203,864,866 - 203,873,259 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936596 | 3,413,890 - 3,422,484 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936596 | 3,414,003 - 3,422,467 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PGLS (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 2 | 60,187,747 - 60,197,648 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 60,186,690 - 60,198,037 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 59,778,632 - 59,787,018 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PGLS (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 6 | 15,997,865 - 16,006,137 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 6 | 15,997,806 - 16,006,805 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666074 | 3,417,737 - 3,426,225 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Pgls (Heterocephalus glaber - naked mole-rat) |
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