Depdc1 (DEP domain containing 1) - Rat Genome Database

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Gene: Depdc1 (DEP domain containing 1) Rattus norvegicus
Analyze
Symbol: Depdc1
Name: DEP domain containing 1
RGD ID: 1306987
Description: Predicted to enable GTPase activator activity. Predicted to be involved in negative regulation of DNA-templated transcription. Predicted to be part of transcription repressor complex. Predicted to be active in nucleus. Orthologous to human DEPDC1 (DEP domain containing 1); INTERACTS WITH 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: DEP domain containing 1a; DEP domain-containing protein 1A; Depdc1a; LOC295538
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82251,343,250 - 251,376,709 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2251,343,281 - 251,376,709 (+)EnsemblGRCr8
mRatBN7.22248,684,508 - 248,717,951 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2248,684,523 - 248,717,951 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2256,394,121 - 256,427,701 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02254,287,651 - 254,321,231 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02249,254,597 - 249,288,165 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.02264,704,738 - 264,738,265 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2264,704,769 - 264,738,257 (+)Ensemblrn6Rnor6.0
Rnor_5.02283,373,918 - 283,407,440 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42257,763,301 - 257,796,571 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2240,433,308 - 240,466,751 (+)NCBICelera
RGSC_v3.12257,722,336 - 257,811,979 (+)NCBI
Cytogenetic Map2q45NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,1-dichloroethene  (ISO)
1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene  (ISO)
1-naphthyl isothiocyanate  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 3-benzoate  (EXP)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,4'-trichlorobiphenyl  (ISO)
2-butoxyethanol  (ISO)
2-palmitoylglycerol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3-methylcholanthrene  (ISO)
4,4'-sulfonyldiphenol  (ISO)
6-propyl-2-thiouracil  (EXP)
acetamide  (EXP)
acrylamide  (ISO)
aflatoxin B1  (ISO)
aflatoxin M1  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (EXP)
arsenous acid  (ISO)
azathioprine  (ISO)
azoxystrobin  (ISO)
benzene  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (EXP,ISO)
brequinar  (ISO)
butanal  (ISO)
cadmium dichloride  (EXP)
calcitriol  (ISO)
carbon nanotube  (ISO)
chlorpyrifos  (ISO)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diallyl trisulfide  (ISO)
diarsenic trioxide  (ISO)
dichloroacetic acid  (ISO)
dicrotophos  (ISO)
diethylstilbestrol  (ISO)
dimethylarsinic acid  (EXP)
dimethylarsinous acid  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
Enterolactone  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
FR900359  (ISO)
furan  (EXP)
gentamycin  (EXP)
hexadecanoic acid  (ISO)
indometacin  (ISO)
leflunomide  (ISO)
lipopolysaccharide  (ISO)
lucanthone  (ISO)
methamphetamine  (EXP)
methapyrilene  (ISO)
methimazole  (EXP)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
N-Nitrosopyrrolidine  (ISO)
nobiletin  (EXP,ISO)
okadaic acid  (ISO)
oxaliplatin  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
PCB138  (ISO)
pentanal  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenformin  (EXP)
pregnenolone 16alpha-carbonitrile  (EXP)
progesterone  (ISO)
propanal  (ISO)
quercetin  (ISO)
resveratrol  (ISO)
rotenone  (EXP,ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (ISO)
sulfadimethoxine  (EXP)
sulforaphane  (ISO)
sunitinib  (ISO)
temozolomide  (ISO)
testosterone  (EXP,ISO)
tetrachloromethane  (ISO)
thioacetamide  (EXP)
thiram  (ISO)
titanium dioxide  (EXP,ISO)
topotecan  (EXP)
trichloroethene  (EXP)
trichostatin A  (ISO)
trimellitic anhydride  (ISO)
trovafloxacin  (ISO)
tungsten  (ISO)
valproic acid  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
fibrillar center  (IEA,ISO)
nucleoplasm  (IEA,ISO)
nucleus  (IBA,IEA,ISO)
transcription repressor complex  (IBA,IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:20587513  


Genomics

Comparative Map Data
Depdc1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82251,343,250 - 251,376,709 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2251,343,281 - 251,376,709 (+)EnsemblGRCr8
mRatBN7.22248,684,508 - 248,717,951 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2248,684,523 - 248,717,951 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2256,394,121 - 256,427,701 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02254,287,651 - 254,321,231 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02249,254,597 - 249,288,165 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.02264,704,738 - 264,738,265 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2264,704,769 - 264,738,257 (+)Ensemblrn6Rnor6.0
Rnor_5.02283,373,918 - 283,407,440 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42257,763,301 - 257,796,571 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2240,433,308 - 240,466,751 (+)NCBICelera
RGSC_v3.12257,722,336 - 257,811,979 (+)NCBI
Cytogenetic Map2q45NCBI
DEPDC1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38168,474,152 - 68,497,082 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl168,474,152 - 68,497,230 (-)Ensemblhg38GRCh38
GRCh37168,939,835 - 68,962,765 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36168,713,526 - 68,735,295 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34168,652,959 - 68,674,728NCBI
Celera167,230,053 - 67,253,019 (-)NCBICelera
Cytogenetic Map1p31.3NCBI
HuRef167,049,654 - 67,072,558 (-)NCBIHuRef
CHM1_1169,055,195 - 69,078,161 (-)NCBICHM1_1
T2T-CHM13v2.0168,351,536 - 68,374,468 (-)NCBIT2T-CHM13v2.0
Depdc1a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393159,201,042 - 159,235,690 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3159,201,070 - 159,235,592 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm383159,495,414 - 159,529,955 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3159,495,433 - 159,529,955 (+)Ensemblmm10GRCm38
MGSCv373159,158,397 - 159,192,919 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv363159,430,744 - 159,464,869 (+)NCBIMGSCv36mm8
Celera3165,936,145 - 165,970,664 (+)NCBICelera
Cytogenetic Map3H4NCBI
cM Map382.47NCBI
Depdc1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542323,137,835 - 23,159,385 (+)Ensembl
ChiLan1.0NW_00495542323,137,841 - 23,157,548 (+)NCBIChiLan1.0ChiLan1.0
DEPDC1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21158,368,828 - 158,397,336 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11157,529,601 - 157,557,093 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0167,711,907 - 67,734,986 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1169,668,934 - 69,692,143 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl169,668,899 - 69,692,143 (-)EnsemblpanPan2panpan1.1
DEPDC1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1676,848,586 - 76,867,888 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl676,847,715 - 76,865,413 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha679,456,476 - 79,478,640 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0677,438,007 - 77,460,456 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl677,437,719 - 77,457,981 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1676,988,860 - 77,011,249 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0676,891,831 - 76,914,611 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0677,379,331 - 77,401,692 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Depdc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505881,153,752 - 81,185,722 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365913,304,067 - 3,323,462 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365913,303,915 - 3,323,462 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DEPDC1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6144,157,588 - 144,185,963 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.16144,157,569 - 144,183,977 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
DEPDC1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12064,615,693 - 64,639,088 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2064,615,866 - 64,636,294 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366603352,974,266 - 52,997,660 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Depdc1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474227,240,342 - 27,258,681 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474227,240,906 - 27,288,872 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Depdc1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v132,064,887 - 2,095,485 (+)NCBIRrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:182
Count of miRNA genes:79
Interacting mature miRNAs:82
Transcripts:ENSRNOT00000012667, ENSRNOT00000031544
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
7207484Bss108Bone structure and strength QTL 1085.3femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)2214404877251712708Rat
2313073Bmd75Bone mineral density QTL 754.10.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)2218051934251712708Rat
2307174Activ3Activity QTL 34.830.000058locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)2210956252251712708Rat
1331794Bp202Blood pressure QTL 2023.66819arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2143344967251712708Rat
7207482Bss107Bone structure and strength QTL 1077femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)2214404877251712708Rat
1298075Scl17Serum cholesterol level QTL 173.4blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)2214404877251712708Rat
1331805Cm29Cardiac mass QTL 293.50746heart mass (VT:0007028)heart wet weight (CMO:0000069)2143344967251712708Rat
1641891Alcrsp17Alcohol response QTL 17response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2151869660251712708Rat
2317752Glom23Glomerulus QTL 233.6urine protein amount (VT:0005160)urine protein level (CMO:0000591)2196140964251540988Rat
1549836Bss2Bone structure and strength QTL 27.5femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)2214404877251712708Rat
7207490Bss111Bone structure and strength QTL 1116.4femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)2214404877251712708Rat

Markers in Region
RH131980  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr82251,376,524 - 251,376,694 (+)Marker Load Pipeline
mRatBN7.22248,717,766 - 248,717,936 (+)MAPPERmRatBN7.2
Rnor_6.02264,738,081 - 264,738,250NCBIRnor6.0
Rnor_5.02283,407,256 - 283,407,425UniSTSRnor5.0
RGSC_v3.42257,797,188 - 257,797,357UniSTSRGSC3.4
Celera2240,466,567 - 240,466,736UniSTS
RH 3.4 Map21660.41UniSTS
Cytogenetic Map2q45UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 11 64 156 88 87 56 85 56 6 336 180 11 135 76 92 31 14 14

Sequence


Ensembl Acc Id: ENSRNOT00000012667   ⟹   ENSRNOP00000012667
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2251,343,281 - 251,376,709 (+)Ensembl
mRatBN7.2 Ensembl2248,684,523 - 248,717,951 (+)Ensembl
Rnor_6.0 Ensembl2264,704,769 - 264,738,257 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000118417   ⟹   ENSRNOP00000090441
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2251,343,307 - 251,376,707 (+)Ensembl
mRatBN7.2 Ensembl2248,684,534 - 248,717,942 (+)Ensembl
RefSeq Acc Id: NM_001305205   ⟹   NP_001292134
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82251,343,281 - 251,376,709 (+)NCBI
mRatBN7.22248,684,523 - 248,717,951 (+)NCBI
Rnor_6.02264,704,751 - 264,738,265 (+)NCBI
Celera2240,433,308 - 240,466,751 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006233537   ⟹   XP_006233599
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82251,343,250 - 251,376,709 (+)NCBI
mRatBN7.22248,684,508 - 248,717,150 (+)NCBI
Rnor_6.02264,704,738 - 264,738,265 (+)NCBI
Rnor_5.02283,373,918 - 283,407,440 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001292134 (Get FASTA)   NCBI Sequence Viewer  
  XP_006233599 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL82580 (Get FASTA)   NCBI Sequence Viewer  
  EDL82581 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000012667
  ENSRNOP00000012667.6
  ENSRNOP00000090441
  ENSRNOP00000090441.1
RefSeq Acc Id: XP_006233599   ⟸   XM_006233537
- Peptide Label: isoform X1
- UniProtKB: A0A8I6AEC2 (UniProtKB/TrEMBL),   A6HWU5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001292134   ⟸   NM_001305205
- UniProtKB: D3ZGJ9 (UniProtKB/TrEMBL),   A6HWU4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000012667   ⟸   ENSRNOT00000012667
Ensembl Acc Id: ENSRNOP00000090441   ⟸   ENSRNOT00000118417
Protein Domains
DEP   Rho-GAP

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZGJ9-F1-model_v2 AlphaFold D3ZGJ9 1-809 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13691839
Promoter ID:EPDNEW_R2364
Type:initiation region
Name:Depdc1_1
Description:DEP domain containing 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.02264,704,779 - 264,704,839EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306987 AgrOrtholog
BioCyc Gene G2FUF-50687 BioCyc
Ensembl Genes ENSRNOG00000009503 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000012667 ENTREZGENE
  ENSRNOT00000012667.10 UniProtKB/TrEMBL
  ENSRNOT00000118417 ENTREZGENE
  ENSRNOT00000118417.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.10.10 UniProtKB/TrEMBL
  1.10.555.10 UniProtKB/TrEMBL
InterPro DEP_dom UniProtKB/TrEMBL
  Rho_GTPase_activation_prot UniProtKB/TrEMBL
  RhoGAP_dom UniProtKB/TrEMBL
  WH-like_DNA-bd_sf UniProtKB/TrEMBL
  WH_DNA-bd_sf UniProtKB/TrEMBL
KEGG Report rno:295538 UniProtKB/TrEMBL
NCBI Gene 295538 ENTREZGENE
PANTHER DEP DOMAIN-CONTAINING UniProtKB/TrEMBL
  DEP DOMAIN-CONTAINING PROTEIN 1A UniProtKB/TrEMBL
Pfam DEP UniProtKB/TrEMBL
  RhoGAP UniProtKB/TrEMBL
PhenoGen Depdc1 PhenoGen
PROSITE DEP UniProtKB/TrEMBL
  RHOGAP UniProtKB/TrEMBL
RatGTEx ENSRNOG00000009503 RatGTEx
SMART DEP UniProtKB/TrEMBL
Superfamily-SCOP Rho_GAP UniProtKB/TrEMBL
  SSF46785 UniProtKB/TrEMBL
UniProt A0A8I6AEC2 ENTREZGENE, UniProtKB/TrEMBL
  A6HWU4 ENTREZGENE, UniProtKB/TrEMBL
  A6HWU5 ENTREZGENE, UniProtKB/TrEMBL
  D3ZGJ9 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-09-26 Depdc1  DEP domain containing 1  Depdc1a  DEP domain containing 1a   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Depdc1a  DEP domain containing 1a   Depdc1a_predicted  DEP domain containing 1a (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-30 Depdc1a_predicted  DEP domain containing 1a (predicted)  Depdc1_predicted  DEP domain containing 1 (predicted)  Symbol and Name updated 1299863 APPROVED
2005-01-12 Depdc1_predicted  DEP domain containing 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED