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Gene: Tdrd9 (tudor domain containing 9) Rattus norvegicus

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Symbol:

Tdrd9

Name:

tudor domain containing 9

RGD ID:

1306942

Description:

Predicted to enable ATP hydrolysis activity; RNA binding activity; and helicase activity. Predicted to be involved in several processes, including male meiosis I; regulatory ncRNA-mediated gene silencing; and spermatogenesis. Predicted to act upstream of or within transposable element silencing. Predicted to be located in piP-body. Predicted to be active in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in spermatogenic failure 30. Orthologous to human TDRD9 (tudor domain containing 9); INTERACTS WITH bisphenol A; N,N-diethyl-m-toluamide; permethrin.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

ATP-dependent RNA helicase TDRD9; LOC299343; putative ATP-dependent RNA helicase TDRD9; tudor domain-containing protein 9

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TDRD9 (tudor domain containing 9)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, Panther, PhylomeDB
Mus musculus (house mouse):	Tdrd9 (tudor domain containing 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tdrd9 (tudor domain containing 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TDRD9 (tudor domain containing 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TDRD9 (tudor domain containing 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tdrd9 (tudor domain containing 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TDRD9 (tudor domain containing 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TDRD9 (tudor domain containing 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tdrd9 (tudor domain containing 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Tdrd9 (tudor domain containing 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	FUZ (fuzzy planar cell polarity protein)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	TDRD9 (tudor domain containing 9)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Tdrd9 (tudor domain containing 9)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	tdrd9 (tudor domain containing 9)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	spn-E	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	spn-E	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	tdrd9	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	136,850,797 - 136,966,225 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	136,850,812 - 136,966,225 (+)	Ensembl				GRCr8
mRatBN7.2	6	131,029,644 - 131,145,076 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	131,029,652 - 131,144,651 (+)	Ensembl				mRatBN7.2
Rnor_6.0	6	136,536,636 - 136,650,481 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	136,536,736 - 136,649,859 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	145,545,128 - 145,660,285 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	136,758,888 - 136,876,987 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	128,583,056 - 128,697,859 (+)	NCBI		Celera
RGSC_v3.1	6	136,797,304 - 136,883,174 (+)	NCBI
Cytogenetic Map	6	q32	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

azoospermia (ISO)

COVID-19 (ISO)

male infertility (ISO)

spermatogenic failure 30 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-demecolcine (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4-D (ISO)

Aflatoxin B2 alpha (ISO)

aldehydo-D-glucose (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

Bisphenol A diglycidyl ether (ISO)

bisphenol AF (ISO)

CGP 52608 (ISO)

D-glucose (ISO)

dexamethasone (ISO)

ethyl methanesulfonate (ISO)

formaldehyde (ISO)

fructose (ISO)

glucose (ISO)

lipopolysaccharide (ISO)

methapyrilene (ISO)

methyl methanesulfonate (ISO)

mono(2-ethylhexyl) phthalate (ISO)

N,N-diethyl-m-toluamide (EXP)

okadaic acid (ISO)

permethrin (EXP)

potassium dichromate (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

valproic acid (ISO)

vincristine (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell differentiation (IEA)

fertilization (IEA,ISO,ISS)

male meiosis I (IEA,ISO,ISS)

male meiotic nuclear division (IEA,ISO,ISS)

meiotic cell cycle (IEA)

piRNA processing (IEA,ISO,ISS)

regulatory ncRNA-mediated gene silencing (IEA)

spermatogenesis (IEA,ISO,ISS)

transposable element silencing (ISO)

transposable element silencing by piRNA-mediated DNA methylation (IEA,ISO,ISS)

transposable element silencing by piRNA-mediated heterochromatin formation (IEA,ISO,ISS)

Cellular Component

cytoplasm (IBA,IEA,ISO)

nucleus (IBA,IEA,ISO,ISS)

piP-body (IEA,ISO,ISS)

Molecular Function

ATP binding (IEA)

ATP hydrolysis activity (IEA,ISO,ISS)

helicase activity (IBA,IEA)

hydrolase activity (IEA)

nucleic acid binding (IEA)

nucleotide binding (IEA)

protein binding (ISO)

RNA binding (IBA)

RNA helicase activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:20011505	PMID:20059948	PMID:27473657	PMID:28536242	PMID:28633017

Genomics

Comparative Map Data

Tdrd9
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	136,850,797 - 136,966,225 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	136,850,812 - 136,966,225 (+)	Ensembl				GRCr8
mRatBN7.2	6	131,029,644 - 131,145,076 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	131,029,652 - 131,144,651 (+)	Ensembl				mRatBN7.2
Rnor_6.0	6	136,536,636 - 136,650,481 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	136,536,736 - 136,649,859 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	145,545,128 - 145,660,285 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	136,758,888 - 136,876,987 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	128,583,056 - 128,697,859 (+)	NCBI		Celera
RGSC_v3.1	6	136,797,304 - 136,883,174 (+)	NCBI
Cytogenetic Map	6	q32	NCBI

TDRD9
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	103,928,456 - 104,052,667 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	103,928,456 - 104,052,667 (+)	Ensembl			hg38	GRCh38
GRCh37	14	104,394,793 - 104,519,004 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	103,506,687 - 103,588,755 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	14	103,506,686 - 103,588,755	NCBI
Celera	14	84,449,057 - 84,573,226 (+)	NCBI		Celera
Cytogenetic Map	14	q32.33	NCBI
HuRef	14	84,574,195 - 84,698,206 (+)	NCBI		HuRef
CHM1_1	14	104,333,415 - 104,457,554 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	14	98,165,768 - 98,289,910 (+)	NCBI		T2T-CHM13v2.0

Tdrd9
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	111,937,922 - 112,035,288 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	111,937,993 - 112,035,288 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	12	111,971,488 - 112,068,854 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	111,971,559 - 112,068,854 (+)	Ensembl			mm10	GRCm38
MGSCv37	12	113,209,770 - 113,307,065 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	12	112,441,483 - 112,516,088 (+)	NCBI		MGSCv36	mm8
Celera	12	113,183,556 - 113,261,746 (+)	NCBI		Celera
Cytogenetic Map	12	F1	NCBI
cM Map	12	61.14	NCBI

Tdrd9
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955538	2,667,299 - 2,749,248 (+)	Ensembl
ChiLan1.0	NW_004955538	2,667,219 - 2,749,805 (+)	NCBI	ChiLan1.0	ChiLan1.0

TDRD9
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	105,086,875 - 105,210,976 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	104,303,377 - 104,427,478 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	84,553,807 - 84,677,904 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	104,388,558 - 104,483,554 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	104,388,558 - 104,483,552 (+)	Ensembl			panPan2	panpan1.1

TDRD9
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	71,610,653 - 71,717,772 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	71,610,711 - 71,717,199 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	71,120,610 - 71,228,073 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	71,886,616 - 71,993,319 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	71,888,154 - 71,992,748 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	71,575,326 - 71,683,074 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	71,615,778 - 71,722,590 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	72,014,293 - 72,121,198 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Tdrd9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	2,357,686 - 2,454,268 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936621	1,185,920 - 1,283,303 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936621	1,186,643 - 1,283,213 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TDRD9
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa10.2	7	131,038,909 - 131,119,104 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TDRD9
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	81,864,846 - 81,992,674 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	81,866,235 - 81,992,093 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666053	69,188,530 - 69,319,098 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tdrd9
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624734	971,695 - 1,067,121 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624734	971,174 - 1,067,178 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Tdrd9
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	7	129,564,529 - 129,675,816 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Tdrd9
3823 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	222
Count of miRNA genes:	139
Interacting mature miRNAs:	157
Transcripts:	ENSRNOT00000017118, ENSRNOT00000064451
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4145118	Mcs26	Mammary carcinoma susceptibility QTL 26		0.0001	mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	6	112483610	147156653	Rat
1331797	Bp213	Blood pressure QTL 213	3.291		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	6	114241077	147156653	Rat
1641917	Colcr5	Colorectal carcinoma resistance QTL 5	3.18	0.0009	intestine integrity trait (VT:0010554)	benign colorectal tumor number (CMO:0001795)	6	98944780	143944780	Rat
71111	Iddm8	Insulin dependent diabetes mellitus QTL 8	1.9	0.002	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	6	110921244	147156653	Rat
724524	Uae2	Urinary albumin excretion QTL 2	2.7	0.0005	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	79198463	144254945	Rat
1358355	Srcrt4	Stress Responsive Cort QTL 4	6.39		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	106095977	147156653	Rat
2303624	Vencon5	Ventilatory control QTL 5	4.45		respiration trait (VT:0001943)	minute ventilation (CMO:0000132)	6	93778632	138778632	Rat
737976	Pia24	Pristane induced arthritis QTL 24			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	6	118366855	147156653	Rat
2312560	Pur20	Proteinuria QTL 20	2.1	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	6	131392689	143944780	Rat
2313399	Anxrr28	Anxiety related response QTL 28			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	6	101593607	138161926	Rat
1298087	Iddm18	Insulin dependent diabetes mellitus QTL 18		0.0001	urine glucose amount (VT:0001758)	percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)	6	122236101	147156653	Rat
12801471	Schws9	Schwannoma susceptibility QTL 9			nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	6	101593607	146593607	Rat
2293085	Iddm29	Insulin dependent diabetes mellitus QTL 29	7.66		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	6	121444670	147156653	Rat

Markers in Region

AA998592

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	131,042,407 - 131,042,586 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	136,548,546 - 136,548,724	NCBI	Rnor6.0
Rnor_5.0	6	145,557,384 - 145,557,562	UniSTS	Rnor5.0
RGSC_v3.4	6	136,771,757 - 136,771,935	UniSTS	RGSC3.4
Celera	6	128,595,423 - 128,595,601	UniSTS
RH 3.4 Map	6	783.9	UniSTS
Cytogenetic Map	6	q32	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
7	9	56	139	58	56	26	74	26	6	274	154	5	116	80	78	30	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001419577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_001072421	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006225882	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764983	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764985	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008776327	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594514	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594515	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594516	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594517	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594518	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594519	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017603301	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017603302	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017603303	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017603304	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017603305	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017603306	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039113387	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039113388	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039113391	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261791	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010052076	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC120242	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC087164	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC104675	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000086594 ⟹ ENSRNOP00000073728

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	136,850,812 - 136,966,225 (+)	Ensembl
mRatBN7.2 Ensembl	6	131,029,652 - 131,144,651 (+)	Ensembl
Rnor_6.0 Ensembl	6	136,536,736 - 136,649,859 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000110617 ⟹ ENSRNOP00000093190

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	136,850,812 - 136,966,225 (+)	Ensembl
mRatBN7.2 Ensembl	6	131,029,652 - 131,144,651 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000171820 ⟹ ENSRNOP00000111390

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	136,850,812 - 136,966,225 (+)	Ensembl

RefSeq Acc Id:

NM_001419577 ⟹ NP_001406506

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	136,850,812 - 136,966,225 (+)	NCBI
mRatBN7.2	6	131,029,661 - 131,145,076 (+)	NCBI

RefSeq Acc Id:

XM_008764985 ⟹ XP_008763207

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	136,850,797 - 136,965,468 (+)	NCBI
mRatBN7.2	6	131,029,645 - 131,144,320 (+)	NCBI
Rnor_6.0	6	136,536,637 - 136,649,751 (+)	NCBI

Sequence:

show sequence

GCTTCTGGAACGGTCGTTGTGGGAGGCCGGGAGGGCCGTGCCCTAAAGGCTTTGCCACCATTGG
AGTCAGGCAGTTGAGGCAGCTCTTGGGCACCGAGGATGTTGCGCAAGCTCACGGTCGACCAGAT
AAATGACTGGTTCACCATAGGCAAGACGGTGACCAATGTGGAGCTGCTGGGCTTGCCGCCTGCC
TTCCCTGCGGAGGCGCCCCGGGAGGAGGTCCAGCGCTCGGAGGAGGTCCCCAGCGAGGCCCCTA
CGGCCCAGGCCCAGGATCCAGTTAAGGCCACAGCACTGGCCAGACCAGCTTCAGCCTTTGGAAG
GTCGCTCAGCCAGAGGAGCTCAGAAGTAGAGTATATTAACAAATACAGACAGCTTGAAGCACAA
GAACTTGATATTTATGGCCAAGATCAGCCACCCAGTGGGCCAGGTCTGAGGTCACCATTGGCTA
AGATAAGTAATGTGGCATGCATCCCAGAGACAACTTACAAATATCCTGATTTGCCTATAAATCG
GTGTAAAGAAGAGGTTATTTCCTTGATAGAAAGCAATTCTGTGGTGATCATACACGGTGCCACA
GGGAGCGGCAAGAGCACACAGCTTCCACAGTACGTCCTGGACCACTACACACAGCGCTCTGCCT
TCTGCAACATCGTAGTCACCCAGCCACGGAAAATAGGGGCCAGCAGCATTGCCAGGTGGATCAG
TAAGGAGCGCTCCTGGACTCTGGGTGGCTTGGTAGGCTATCAGGTAGGGCTGGAGAAAACAGCA
ACAGAAGACACTCGGCTGATTTACATGACCACTGGAGTCCTGCTTCAGAAGATCGTTAGTGCCA
AGAGCTTGATGGAGTTCACGCACGTCTTCATTGATGAGGTGCACGAACGAACTGAAGAGATGGA
TTTCCTGCTCTTGGTAGTCCGTAAACTCCTGAGGACAAACTCACGTTTTGTGAAGGTGATCCTC
ATGTCTGCCACCATCAACTGCAAGCAGTTTGCAGACTACTTTGCTGTTCCTGTTCAGAACAAGA
TGAACCCTGCATATGTGTTTGAGGTGGAAGGCAAGCCCCACACTATCGAACAGTATTACCTTAA
TGATTTGGGGCACATTTATCACAGTGGGCTCCCCCCCTACCGTCTGGAGGAGCCAGTGATAACG
AAGGACGTCTATGAAGTTGCCGTCTCCCTCATCCAGATGTTCGATGACCTGGACATGAAGGAGA
GTGGGAACAAGACCTGGTCCGGGGCCCAGTTTGTGTCGGAGCGGAGCAGCGTGCTGGTGTTTCT
GCCAGGTCTGGGTGAGATCAATTATATGCATGAGCTTCTCACAAACATGATTCACAAAAGGTTA
CAGGTCTATCCACTCCATTCCAGTGTGACTTTAGAAGAACAGAATAATGTATTTTTAAGTCCAG
TCCCTGGGTACAGAAAGATTATCCTGTCAACCAACATTGCAGAGAGTTCTGTCACAGTTCCTGA
TGTCAAATATGTTATAGATTTTTGCCTGACCCGAACTCTGGTTTGTGATGAAGATACAAATTAT
CAGAGTCTGCGGCTAAGCTGGGCCTCGAAGACCAGCTGTGACCAGAGAAAAGGCCGTGCTGGAC
GAGTGTCTAAAGGATATTGCTACAGGCTGATCCACAGGGACTTCTGGGACAGCGCCATCCCTGA
CCACGTTGTTCCTGAGATGTTGCGCTGTCCGCTGGGAAGCACCGTATTGAAGGTGAAGTTGCTC
GACATGGGTGAACCTAGAGCTCTGCTGGCAACCGCGCTGTCTCCACCCAGCCTGAGTGACATCG
AGCGCACCATTCTTCTGTTGAAGGAGGTTGGAGCACTGGCAGTTAGTGGGCAGAGAGAGGACGA
AAACCCTCATGATGGTGAATTGACCTTCCTGGGAAGAGTGCTGGCACAGCTCCCTGTCAGTCAG
CAGCTGGGTAAACTCATTGTGCTGGGACATGTATTTGGGTGCCTGGATGAGTGTCTCATCATAG
CGGCAGCTCTTTCTCTGAAGAACTTTTTCACGATGCCTTTTCGACAGCATCTGGATGGATATAG
GAACAAAGTGCACTTCTCAGGAAGTAGCAGGAGTGACTGCCTGGCACTTGTGGAGGCGTTCAGG
GCCTGGCAGGCTTGCAGACAGCGAGGAGAGCTGCGGCATCCCAAGGATGAACTTGACTGGGGAC
GGCTGAATTACATTCAAATAAAGAGAATCAGAGAGGTGGCTGAGTTATATGAAGAATTGAAGAA
TAGAATCTCACAGTTCAACATGTTTGTGGATCCTCGCCATCCTGTCTTGGATCAGGAGTATCCA
TATAAGCAGCGCTTCATCCTGCAGGTTGTACTAGCTGGTGCTTTTTATCCGAATTACTTTACTT
TTGGACAGCCAGACGAGGAGATGGCAGTAAGGGAGCTGGCAGGCAGAGACCCAAAGACAACAGT
CGTGCTGAAGCACATCCCCCCCTATGGATTTCTTTACTACAAGCAACTGCAGTCTCTCTTCAGA
CAGTGCGGTCAAGTCAAATCCATTGTGTTTGATGGCGCAAAAGCCTTTGTGGAGTTTTCACGGA
ATCCGACAGAAAGATTTAAGACCCTCCCTGCTGTGAACTTGGCAGTCAAGATGTCCCAGTTAAA
AGTGTCCCTTGAGCTCAGTATCCATGCCGCAGAGGAGATCGAGGGGAAGGTGCAAGGCGGGTCG
GTGTCAAAGCTCAGGAACACAAGGGTGAATGTGGACTTCCAGAAGCAGACAGTAGACCCCATGC
AAGTGTCATTCAACACCCTGGACAGACCCCGGACAGTAGCAGATCTCCTCCTGACAGTTGATGT
CACTGAGGTGGTAGAAGTGGGGCACTTCTGGGGGTACAGGATCGACGAGAGGAACGCAGAGCTG
CTGAGACAACTGACTGCTGAGATAAACCGCCTAGAGCTGGTTCCTCTGCCTATCCACCCGCATC
CGGACTTAGTCTGCCTGGCACCTTTCACTGATTACAACAAGGAGAGCTACTTTAGAGCTCAAAT
TCTTTATGTTTCGGGAAATTCTGCTGAGGTATTCTTTGTAGACTATGGGAATAGGTCTCATGTA
GACCTAGATCTCCTGAGGGAGATCCCCTGTCAGCTTTTGGAGCTTCCATTTCAGGCTTTGGAAT
TCAAGATTTGCAAAATGCGACCATCAGCAAAGTCTCTCATCTGTGGAGAGCACTGGAGTGGAGG
CGCCAATGGGCGGTTTGCCGCCCTGGTCAGCGGCTGCCCTCTCCTGGTGAAGGTGTTCTCCATT
GTACACAGCGTCCTGCACGTGGACGTGTACCGATACTCGGGCGCCCAGGATGCCGTCAACATCA
GAGACGTTCTCATCAGGGAGGGCTATGCTGAGCTTGCAGAGGAGTCCTATGAGTCCAAACAAAG
CTATGAAGTCCTCAAGGGTTTCTTTGCTAAGTCAGTGGACACCATGCCGGATGGCTCTGTGTCC
TCTCCTATGAAGGACGACGAGAAGCATCTCATCCAGATTCTGTTGGAGAGCTTTGCTTCCAATC
GGCTGGGTGCTCCAAACTGCAAGGCTGTCCTCCACGGGCCTTTTAATCCTTATGAGCTGAAGTG
TCATAGTCTGACCAGAATATCCAAGTTCAGATGTGTGTGGATTGAGAAGGAGAGCATCAATTCT
GTGGTCATCAGCGACAGCCCTGCCGACCTGCACCAGAGGATGCTGGTTGCAGCTTCACTCTCAG
TTAACGAGACTGGGTCCACCATGCTCCTGAGAGAGACTTCCCTGATGCCTCACATCCCAGGCCT
CCCCGCACTCCTCAGCATGCTGTTCGCACCGGTGATGGAGTTAAGAGTTGACCGTGAAGGAAAG
TGTTACACTGGGGTGCTTTGTGGTTTGGGGTGGAATTCAACTACGGAGGCCCCTATACTGCCAG
AGCATGACATTGAGCTGGCCTTTGATGTGTGCTTCAACGTGGAGGACATCGTTGAGATTAATAT
TCTCAGGGCTGCTATCAACAAGCTAGCGTGTGATGGGCCACATGGACCCAAGTATCTTGGGCCT
GAGAGAATTGCTCAGTTGCAGGAGAATGCACGTCAGAAACTTCTAGGCTTGTTCTGTCGGTTGA
AACCACGAGAGAAGATTACTCCTCAGTGGCATGAGAAACCCTACGAGTGGAACCAGGGCTATCA
CTGGACAAGCTGCCATTGCAGACTTCGGCATGGAACCCTGAGCTTGCGGTGCAGGGCCCATGAA
GTTGGCCGCATACTGGAAAGTCATGGGAAGTAGAGCTGTACTTGAGAGTTAGTGCGCTTTAGAA
AACTTTGTTTTAAATAAGTGCCCCCAAGTCACTGCTCCCACACACACACACACACACGTGTGTG
GGAGATTTCTCAGTGAGAGTTACCCCAGTATTAAACATCAGTCTTGAAGTGTTTGATGGGGGCA
GCAAAATGGTTTAGCTTGATTAGTCACCTTAGAGTCACATGGTGACAGGAGAGCTCCATCTGTC
TCAGGCTGCCCTCTAACCTTACACGTGTGCTGTGGCACATGCACAAACGCATGTGCACACACAA
ATGAAATTTCAAAACCCCACAATGTGTATTAAAGTGGATGACCAGGTATGTGGGGTGAATTGTG
AAAGTGGAGAAGCATCTGCAAATAGTTTTGTAAAATGGAAAGAACACTTGTCTGTCTTATATGT
CCATATCTGTGAGCACATAGTTTTCTGAATTTGGTGTCTAGACTGGTTTCATCCAGAGCCTGAC
TTGCTGCTTCTCCTCTCTGCAT

hide sequence

RefSeq Acc Id:

XM_017594514 ⟹ XP_017450003

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	136,850,797 - 136,965,470 (+)	NCBI
mRatBN7.2	6	131,029,644 - 131,144,322 (+)	NCBI
Rnor_6.0	6	136,536,637 - 136,649,751 (+)	NCBI

Sequence:

show sequence

GCTTCTGGAACGGTCGTTGTGGGAGGCCGGGAGGGCCGTGCCCTAAAGGCTTTGCCACCATTGG
AGTCAGGCAGTTGAGGCAGCTCTTGGGCACCGAGGATGTTGCGCAAGCTCACGGTCGACCAGAT
AAATGACTGGTTCACCATAGGCAAGACGGTGACCAATGTGGAGCTGCTGGGCTTGCCGCCTGCC
TTCCCTGCGGAGGCGCCCCGGGAGGAGGTCCAGCGCTCGGAGGAGGTCCCCAGCGAGGCCCCTA
CGGCCCAGGCCCAGGATCCAGTTAAGGCCACAGCACTGGCCAGACCAGCTTCAGCCTTTGGAAG
GTCGCTCAGCCAGAGGAGCTCAGAAGTAGAGTATATTAACAAATACAGACAGCTTGAAGCACAA
GAACTTGATATTTATGGCCAAGATCAGCCACCCAGTGGGCCAGGTCTGAGGTCACCATTGGCTA
AGATAAGTAATGTGGCATGCATCCCAGAGACAACTTACAAATATCCTGATTTGCCTATAAATCG
GTGTAAAGAAGAGGTTATTTCCTTGATAGAAAGCAATTCTGTGGTGATCATACACGGTGCCACA
GGGAGCGGCAAGAGCACACAGCTTCCACAGTACGTCCTGGACCACTACACACAGCGCTCTGCCT
TCTGCAACATCGTAGTCACCCAGCCACGGAAAATAGGGGCCAGCAGCATTGCCAGGTGGATCAG
TAAGGAGCGCTCCTGGACTCTGGGTGGCTTGGTAGGCTATCAGGTAGGGCTGGAGAAAACAGCA
ACAGAAGACACTCGGCTGATTTACATGACCACTGGAGTCCTGCTTCAGAAGATCGTTAGTGCCA
AGAGCTTGATGGAGTTCACGCACGTCTTCATTGATGAGGTGCACGAACGAACTGAAGAGATGGA
TTTCCTGCTCTTGGTAGTCCGTAAACTCCTGAGGACAAACTCACGTTTTGTGAAGGTGATCCTC
ATGTCTGCCACCATCAACTGCAAGCAGTTTGCAGACTACTTTGCTGTTCCTGTTCAGAACAAGA
TGAACCCTGCATATGTGTTTGAGGTGGAAGGCAAGCCCCACACTATCGAACAGTATTACCTTAA
TGATTTGGGGCACATTTATCACAGTGGGCTCCCCCCCTACCGTCTGGAGGAGCCAGTGATAACG
AAGGACGTCTATGAAGTTGCCGTCTCCCTCATCCAGATGTTCGATGACCTGGACATGAAGGAGA
GTGGGAACAAGACCTGGTCCGGGGCCCAGTTTGTGTCGGAGCGGAGCAGCGTGCTGGTGTTTCT
GCCAGGTCTGGGTGAGATCAATTATATGCATGAGCTTCTCACAAACATGATTCACAAAAGGTTA
CAGGTCTATCCACTCCATTCCAGTGTGACTTTAGAAGAACAGAATAATGTATTTTTAAGTCCAG
TCCCTGGGTACAGAAAGATTATCCTGTCAACCAACATTGCAGAGAGTTCTGTCACAGTTCCTGA
TGTCAAATATGTTATAGATTTTTGCCTGACCCGAACTCTGGTTTGTGATGAAGATACAAATTAT
CAGAGTCTGCGGCTAAGCTGGGCCTCGAAGACCAGCTGTGACCAGAGAAAAGGCCGTGCTGGAC
GAGTGTCTAAAGGATATTGCTACAGGCTGATCCACAGGGACTTCTGGGACAGCGCCATCCCTGA
CCACGTTGTTCCTGAGATGTTGCGCTGTCCGCTGGGAAGCACCGTATTGAAGGTGAAGTTGCTC
GACATGGGTGAACCTAGAGCTCTGCTGGCAACCGCGCTGTCTCCACCCAGCCTGAGTGACATCG
AGCGCACCATTCTTCTGTTGAAGGAGGTTGGAGCACTGGCAGTTAGTGGGCAGAGAGAGGACGA
AAACCCTCATGATGGTGAATTGACCTTCCTGGGAAGAGTGCTGGCACAGCTCCCTGTCAGTCAG
CAGCTGGGTAAACTCATTGTGCTGGGACATGTATTTGGGTGCCTGGATGAGTGTCTCATCATAG
CGGCAGCTCTTTCTCTGAAGAACTTTTTCACGATGCCTTTTCGACAGCATCTGGATGGATATAG
GAACAAAGTGCACTTCTCAGGAAGTAGCAGGAGTGACTGCCTGGCACTTGTGGAGGCGTTCAGG
GCCTGGCAGGCTTGCAGACAGCGAGGAGAGCTGCGGCATCCCAAGGATGAACTTGACTGGGGAC
GGCTGAATTACATTCAAATAAAGAGAATCAGAGAGGTGGCTGAGTTATATGAAGAATTGAAGAA
TAGAATCTCACAGTTCAACATGTTTGTGGATCCTCGCCATCCTGTCTTGGATCAGGAGTATCCA
TATAAGCAGCGCTTCATCCTGCAGGTTGTACTAGCTGGTGCTTTTTATCCGAATTACTTTACTT
TTGGACAGCCAGACGAGGAGATGGCAGTAAGGGAGCTGGCAGGCAGAGACCCAAAGACAACAGT
CGTGCTGAAGCACATCCCCCCCTATGGATTTCTTTACTACAAGCAACTGCAGTCTCTCTTCAGA
CAGTGCGGTCAAGTCAAATCCATTGTGTTTGATGGCGCAAAAGCCTTTGTGGAGTTTTCACGGA
ATCCGACAGAAAGATTTAAGACCCTCCCTGCTGTGAACTTGGCAGTCAAGATGTCCCAGTTAAA
AGTGTCCCTTGAGCTCAGTATCCATGCCGCAGAGGAGATCGAGGGGAAGGTGCAAGGCGGGTCG
GTGTCAAAGCTCAGGAACACAAGGGTGAATGTGGACTTCCAGAAGCAGACAGTAGACCCCATGC
AAGTGTCATTCAACACCCTGGACAGACCCCGGACAGTAGCAGATCTCCTCCTGACAGTTGATGT
CACTGAGGTGGCCTTATGTGCCCACACTCTTCTCCTGCAGGTGGTAGAAGTGGGGCACTTCTGG
GGGTACAGGATCGACGAGAGGAACGCAGAGCTGCTGAGACAACTGACTGCTGAGATAAACCGCC
TAGAGCTGGTTCCTCTGCCTATCCACCCGCATCCGGACTTAGTCTGCCTGGCACCTTTCACTGA
TTACAACAAGGAGAGCTACTTTAGAGCTCAAATTCTTTATGTTTCGGGAAATTCTGCTGAGGTA
TTCTTTGTAGACTATGGGAATAGGTCTCATGTAGACCTAGATCTCCTGAGGGAGATCCCCTGTC
AGCTTTTGGAGCTTCCATTTCAGGCTTTGGAATTCAAGATTTGCAAAATGCGACCATCAGCAAA
GTCTCTCATCTGTGGAGAGCACTGGAGTGGAGGCGCCAATGGGCGGTTTGCCGCCCTGGTCAGC
GGCTGCCCTCTCCTGGTGAAGGTGTTCTCCATTGTACACAGCGTCCTGCACGTGGACGTGTACC
GATACTCGGGCGCCCAGGATGCCGTCAACATCAGAGACGTTCTCATCAGGGAGGGCTATGCTGA
GCTTGCAGAGGAGTCCTATGAGTCCAAACAAAGCTATGAAGTCCTCAAGGGTTTCTTTGCTAAG
TCAGTGGACACCATGCCGGATGGCTCTGTGTCCTCTCCTATGAAGGACGACGAGAAGCATCTCA
TCCAGATTCTGTTGGAGAGCTTTGCTTCCAATCGGCTGGGTGCTCCAAACTGCAAGGCTGTCCT
CCACGGGCCTTTTAATCCTTATGAGCTGAAGTGTCATAGTCTGACCAGAATATCCAAGTTCAGA
TGTGTGTGGATTGAGAAGGAGAGCATCAATTCTGTGGTCATCAGCGACAGCCCTGCCGACCTGC
ACCAGAGGATGCTGGTTGCAGCTTCACTCTCAGTTAACGAGACTGGGTCCACCATGCTCCTGAG
AGAGACTTCCCTGATGCCTCACATCCCAGGCCTCCCCGCACTCCTCAGCATGCTGTTCGCACCG
GTGATGGAGTTAAGAGTTGACCGTGAAGGAAAGTGTTACACTGGGGTGCTTTGTGGTTTGGGGT
GGAATTCAACTACGGAGGCCCCTATACTGCCAGAGCATGACATTGAGCTGGCCTTTGATGTGTG
CTTCAACGTGGAGGACATCGTTGAGATTAATATTCTCAGGGCTGCTATCAACAAGCTAGCGTGT
GATGGGCCACATGGACCCAAGTATCTTGGGCCTGAGAGAATTGCTCAGTTGCAGGAGAATGCAC
GTCAGAAACTTCTAGGCTTGTTCTGTCGGTTGAAACCACGAGAGAAGATTACTCCTCAGTGGCA
TGAGAAACCCTACGAGTGGAACCAGGGCTATCACTGGACAAGCTGCCATTGCAGACTTCGGCAT
GGAACCCTGAGCTTGCGGTGCAGGGCCCATGAAGTTGGCCGCATACTGGAAAGTCATGGGAAGT
AGAGCTGTACTTGAGAGTTAGTGCGCTTTAGAAAACTTTGTTTTAAATAAGTGCCCCCAAGTCA
CTGCTCCCACACACACACACACACACGTGTGTGGGAGATTTCTCAGTGAGAGTTACCCCAGTAT
TAAACATCAGTCTTGAAGTGTTTGATGGGGGCAGCAAAATGGTTTAGCTTGATTAGTCACCTTA
GAGTCACATGGTGACAGGAGAGCTCCATCTGTCTCAGGCTGCCCTCTAACCTTACACGTGTGCT
GTGGCACATGCACAAACGCATGTGCACACACAAATGAAATTTCAAAACCCCACAATGTGTATTA
AAGTGGATGACCAGGTATGTGGGGTGAATTGTGAAAGTGGAGAAGCATCTGCAAATAGTTTTGT
AAAATGGAAAGAACACTTGTCTGTCTTATATGTCCATATCTGTGAGCACATAGTTTTCTGAATT
TGGTGTCTAGACTGGTTTCATCCAGAGCCTGACTTGCTGCTTCTCCTCTCTGCAT

hide sequence

RefSeq Acc Id:

XM_017594515 ⟹ XP_017450004

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	136,850,797 - 136,966,225 (+)	NCBI
mRatBN7.2	6	131,029,645 - 131,145,076 (+)	NCBI
Rnor_6.0	6	136,536,637 - 136,650,481 (+)	NCBI

Sequence:

show sequence

GCTTCTGGAACGGTCGTTGTGGGAGGCCGGGAGGGCCGTGCCCTAAAGGCTTTGCCACCATTGG
AGTCAGGCAGTTGAGGCAGCTCTTGGGCACCGAGGATGTTGCGCAAGCTCACGGTCGACCAGAT
AAATGACTGGTTCACCATAGGCAAGACGGTGACCAATGTGGAGCTGCTGGGCTTGCCGCCTGCC
TTCCCTGCGGAGGCGCCCCGGGAGGAGGTCCAGCGCTCGGAGGAGGTCCCCAGCGAGGCCCCTA
CGGCCCAGGCCCAGGATCCAGTTAAGGCCACAGCACTGGCCAGACCAGCTTCAGCCTTTGGAAG
GTCGCTCAGCCAGAGGAGCTCAGAAGTAGAGTATATTAACAAATACAGACAGCTTGAAGCACAA
GAACTTGATATTTATGGCCAAGATCAGCCACCCAGTGGGCCAGGTCTGAGGTCACCATTGGCTA
AGATAAGTAATGTGGCATGCATCCCAGAGACAACTTACAAATATCCTGATTTGCCTATAAATCG
GTGTAAAGAAGAGGTTATTTCCTTGATAGAAAGCAATTCTGTGGTGATCATACACGGTGCCACA
GGGAGCGGCAAGAGCACACAGCTTCCACAGTACGTCCTGGACCACTACACACAGCGCTCTGCCT
TCTGCAACATCGTAGTCACCCAGCCACGGAAAATAGGGGCCAGCAGCATTGCCAGGTGGATCAG
TAAGGAGCGCTCCTGGACTCTGGGTGGCTTGGTAGGCTATCAGGTAGGGCTGGAGAAAACAGCA
ACAGAAGACACTCGGCTGATTTACATGACCACTGGAGTCCTGCTTCAGAAGATCGTTAGTGCCA
AGAGCTTGATGGAGTTCACGCACGTCTTCATTGATGAGGTGCACGAACGAACTGAAGAGATGGA
TTTCCTGCTCTTGGTAGTCCGTAAACTCCTGAGGACAAACTCACGTTTTGTGAAGGTGATCCTC
ATGTCTGCCACCATCAACTGCAAGCAGTTTGCAGACTACTTTGCTGTTCCTGTTCAGAACAAGA
TGAACCCTGCATATGTGTTTGAGGTGGAAGGCAAGCCCCACACTATCGAACAGTATTACCTTAA
TGATTTGGGGCACATTTATCACAGTGGGCTCCCCCCCTACCGTCTGGAGGAGCCAGTGATAACG
AAGGACGTCTATGAAGTTGCCGTCTCCCTCATCCAGATGTTCGATGACCTGGACATGAAGGAGA
GTGGGAACAAGACCTGGTCCGGGGCCCAGTTTGTGTCGGAGCGGAGCAGCGTGCTGGTGTTTCT
GCCAGGTCTGGGTGAGATCAATTATATGCATGAGCTTCTCACAAACATGATTCACAAAAGGTTA
CAGGTCTATCCACTCCATTCCAGTGTGACTTTAGAAGAACAGAATAATGTATTTTTAAGTCCAG
TCCCTGGGTACAGAAAGATTATCCTGTCAACCAACATTGCAGAGAGTTCTGTCACAGTTCCTGA
TGTCAAATATGTTATAGATTTTTGCCTGACCCGAACTCTGGTTTGTGATGAAGATACAAATTAT
CAGAGTCTGCGGCTAAGCTGGGCCTCGAAGACCAGCTGTGACCAGAGAAAAGGCCGTGCTGGAC
GAGTGTCTAAAGGATATTGCTACAGGCTGATCCACAGGGACTTCTGGGACAGCGCCATCCCTGA
CCACGTTGTTCCTGAGATGTTGCGCTGTCCGCTGGGAAGCACCGTATTGAAGGTGAAGTTGCTC
GACATGGGTGAACCTAGAGCTCTGCTGGCAACCGCGCTGTCTCCACCCAGCCTGAGTGACATCG
AGCGCACCATTCTTCTGTTGAAGGAGGTTGGAGCACTGGCAGTTAGTGGGCAGAGAGAGGACGA
AAACCCTCATGATGGTGAATTGACCTTCCTGGGAAGAGTGCTGGCACAGCTCCCTGTCAGTCAG
CAGCTGGGTAAACTCATTGTGCTGGGACATGTATTTGGGTGCCTGGATGAGTGTCTCATCATAG
CGGCAGCTCTTTCTCTGAAGAACTTTTTCACGATGCCTTTTCGACAGCATCTGGATGGATATAG
GAACAAAGTGCACTTCTCAGGAAGTAGCAGGAGTGACTGCCTGGCACTTGTGGAGGCGTTCAGG
GCCTGGCAGGCTTGCAGACAGCGAGGAGAGCTGCGGCATCCCAAGGATGAACTTGACTGGGGAC
GGCTGAATTACATTCAAATAAAGAGAATCAGAGAGGTGGCTGAGTTATATGAAGAATTGAAGAA
TAGAATCTCACAGTTCAACATGTTTGTGGATCCTCGCCATCCTGTCTTGGATCAGGAGTATCCA
TATAAGCAGCGCTTCATCCTGCAGGTTGTACTAGCTGGTGCTTTTTATCCGAATTACTTTACTT
TTGGACAGCCAGACGAGGAGATGGCAGTAAGGGAGCTGGCAGGCAGAGACCCAAAGACAACAGT
CGTGCTGAAGCACATCCCCCCCTATGGATTTCTTTACTACAAGCAACTGCAGTCTCTCTTCAGA
CAGTGCGGTCAAGTCAAATCCATTGTGTTTGATGGCGCAAAAGCCTTTGTGGAGTTTTCACGGA
ATCCGACAGAAAGATTTAAGACCCTCCCTGCTGTGAACTTGGCAGTCAAGATGTCCCAGTTAAA
AGTGTCCCTTGAGCTCAGTATCCATGCCGCAGAGGAGATCGAGGGGAAGGTGCAAGGCGGGTCG
GTGTCAAAGCTCAGGAACACAAGGGTGAATGTGGACTTCCAGAAGCAGACAGTAGACCCCATGC
AAGTGTCATTCAACACCCTGGACAGACCCCGGACAGTAGCAGATCTCCTCCTGACAGTTGATGT
CACTGAGGTGGCCTTATGTGCCCACACTCTTCTCCTGCAGGTGGTAGAAGTGGGGCACTTCTGG
GGGTACAGGATCGACGAGAGGAACGCAGAGCTGCTGAGACAACTGACTGCTGAGATAAACCGCC
TAGAGCTGGTTCCTCTGCCTATCCACCCGCATCCGGACTTAGTCTGCCTGGCACCTTTCACTGA
TTACAACAAGGAGAGCTACTTTAGAGCTCAAATTCTTTATGTTTCGGGAAATTCTGCTGAGGTA
TTCTTTGTAGACTATGGGAATAGGTCTCATGTAGACCTAGATCTCCTGAGGGAGATCCCCTGTC
AGCTTTTGGAGCTTCCATTTCAGGCTTTGGAATTCAAGATTTGCAAAATGCGACCATCAGCAAA
GTCTCTCATCTGTGGAGAGCACTGGAGTGGAGGCGCCAATGGGCGGTTTGCCGCCCTGGTCAGC
GGCTGCCCTCTCCTGGTGAAGGTGTTCTCCATTGTACACAGCGTCCTGCACGTGGACGTGTACC
GATACTCGGGCGCCCAGGATGCCGTCAACATCAGAGACGTTCTCATCAGGGAGGGCTATGCTGA
GCTTGCAGAGGAGTCCTATGAGTCCAAACAAAGCTATGAAGTCCTCAAGGGTTTCTTTGCTAAG
TCAGTGGACACCATGCCGGATGGCTCTGTGTCCTCTCCTATGAAGGACGACGAGAAGCATCTCA
TCCAGATTCTGTTGGAGAGCTTTGCTTCCAATCGGCTGGGTGCTCCAAACTGCAAGGCTGTCCT
CCACGGGCCTTTTAATCCTTATGAGCTGAAGTGTCATAGTCTGACCAGAATATCCAAGTTCAGA
TGTGTGTGGATTGAGAAGGAGAGCATCAATTCTGTGGTCATCAGCGACAGCCCTGCCGACCTGC
ACCAGAGGATGCTGGTTGCAGCTTCACTCTCAGTTAACGAGACTGGGTCCACCATGCTCCTGAG
AGAGACTTCCCTGATGCCTCACATCCCAGGCCTCCCCGCACTCCTCAGCATGCTGTTCGCACCG
GTGATGGAGTTAAGAGTTGACCGTGAAGGAAAGTGTTACACTGGGGTGCTTTGTGGTTTGGGGT
GGAATTCAACTACGGAGGCCCCTATACTGCCAGAGCATGACATTGAGCTGGCCTTTGATGTGTG
CTTCAACGTGGAGGACATCGTTGAGATTAATATTCTCAGGGCTGCTATCAACAAGCTAGCGTGT
GATGGGCCACATGGACCCAAGTATCTTGGGCCTGAGAGAATTGCTCAGTTGCAGGAGAATGCAC
GTCAGAAACTTCTAGGCTTGTTCTGTCGGTTGAAACCACGAGAGAAGATTACTCCTCAGTGGCA
TGAGAAACCCTACGAGTGGAACCAGGTGGACCCAAGGCTGGTCATCGAGCAGGCTGAGCGGGAG
GGCGGCCCAGGGAAGAGCACTTGCCTGTACCAGCTGCACACGCCTGTGGTGCTCAGCCCCTGAG
ACGCTGGTCCCCAGCTGCCCTCCCTGTGGGCAGTGGCAGAGGTCTCCTGCAGCTGCTTCCTACC
CCTGCTACCCTCAGGGGCTTCTCCTTCTTGCTGCCTTTGCTCAGAGTGGAGAGTGGTGCTTCTG
TTTGGGTGGGAAAAATCAGAAAGTCTAATCTTCTCCAGAAATGGGGGTCGTGGTATTAAATACT
TTGCAAAAAGTTGTTCTGAAAGAAGATTTTGTATTCTTCTTTAAATATATGAGGGTAAATCTAA
GTAGTCAGTCCCAGAAGAAAAGGTTCCAGAATGTGTTTGTATGCCTCTCCTGTCACAGTTTAGC
TGTTGTGCAGGAGAGAGCCAGACACATGTGAACCCCACCCCCAGTGTGTGTGTGCGTGCACATG
TCGGTGCAGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCATTTT
CTGATGTTCCTTTTTCTTCATTGAAAAGATGTGGTTTTGGTAAAACTTGAGCTTTCTGTGTTTG
GGACTTGTGGTTAAATTAAACCTCTTGGCCTGTGTTTTGGAAATTAGGAGATGTGACCCGACAA
CTGGCATATCTGCAAGACAATAAAGGCATTGACGTTGTGTTCTGA

hide sequence

RefSeq Acc Id:

XM_017594516 ⟹ XP_017450005

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	136,850,797 - 136,965,471 (+)	NCBI
mRatBN7.2	6	131,029,644 - 131,144,322 (+)	NCBI
Rnor_6.0	6	136,536,636 - 136,649,751 (+)	NCBI

Sequence:

show sequence

GGCTTCTGGAACGGTCGTTGTGGGAGGCCGGGAGGGCCGTGCCCTAAAGGCTTTGCCACCATTG
GAGTCAGGCAGTTGAGGCAGCTCTTGGGCACCGAGGATGTTGCGCAAGCTCACGGTCGACCAGA
TAAATGACTGGTTCACCATAGGCAAGACGGTGACCAATGTGGAGCTGCTGGGCTTGCCGCCTGC
CTTCCCTGCGGAGGCGCCCCGGGAGGAGGTCCAGCGCTCGGAGGAGGTCCCCAGCGAGGCCCCT
ACGGCCCAGGCCCAGGATCCAGTTAAGGCCACAGCACTGGCCAGACCAGCTTCAGCCTTTGGAA
GGTCGCTCAGCCAGAGGAGCTCAGAAGTAGAGTATATTAACAAATACAGACAGCTTGAAGCACA
AGAACTTGATATTTATGGCCAAGATCAGCCACCCAGTGGGCCAGGTCTGAGGTCACCATTGGCT
AAGATAAGTAATGTGGCATGCATCCCAGAGACAACTTACAAATATCCTGATTTGCCTATAAATC
GGTGTAAAGAAGAGGTTATTTCCTTGATAGAAAGCAATTCTGTGGTGATCATACACGGTGCCAC
AGGGAGCGGCAAGAGCACACAGCTTCCACAGTACGTCCTGGACCACTACACACAGCGCTCTGCC
TTCTGCAACATCGTAGTCACCCAGCCACGGAAAATAGGGGCCAGCAGCATTGCCAGGTGGATCA
GTAAGGAGCGCTCCTGGACTCTGGGTGGCTTGGTAGGCTATCAGGTAGGGCTGGAGAAAACAGC
AACAGAAGACACTCGGCTGATTTACATGACCACTGGAGTCCTGCTTCAGAAGATCGTTAGTGCC
AAGAGCTTGATGGAGTTCACGCACGTCTTCATTGATGAGGTGCACGAACGAACTGAAGAGATGG
ATTTCCTGCTCTTGGTAGTCCGTAAACTCCTGAGGACAAACTCACGTTTTGTGAAGGTGATCCT
CATGTCTGCCACCATCAACTGCAAGCAGTTTGCAGACTACTTTGCTGTTCCTGTTCAGAACAAG
ATGAACCCTGCATATGTGTTTGAGGTGGAAGGCAAGCCCCACACTATCGAACAGTATTACCTTA
ATGATTTGGGGCACATTTATCACAGTGGGCTCCCCCCCTACCGTCTGGAGGAGCCAGTGATAAC
GAAGGACGTCTATGAAGTTGCCGTCTCCCTCATCCAGATGTTCGATGACCTGGACATGAAGGAG
AGTGGGAACAAGACCTGGTCCGGGGCCCAGTTTGTGTCGGAGCGGAGCAGCGTGCTGGTGTTTC
TGCCAGGTCTGGGTGAGATCAATTATATGCATGAGCTTCTCACAAACATGATTCACAAAAGGTT
ACAGGTCTATCCACTCCATTCCAGTGTGACTTTAGAAGAACAGAATAATGTATTTTTAAGTCCA
GTCCCTGGGTACAGAAAGATTATCCTGTCAACCAACATTGCAGAGAGTTCTGTCACAGTTCCTG
ATGTCAAATATGTTATAGATTTTTGCCTGACCCGAACTCTGGTTTGTGATGAAGATACAAATTA
TCAGAGTCTGCGGCTAAGCTGGGCCTCGAAGACCAGCTGTGACCAGAGAAAAGGCCGTGCTGGA
CGAGTGTCTAAAGGATATTGCTACAGGCTGATCCACAGGGACTTCTGGGACAGCGCCATCCCTG
ACCACGTTGTTCCTGAGATGTTGCGCTGTCCGCTGGGAAGCACCGTATTGAAGGTGAAGTTGCT
CGACATGGGTGAACCTAGAGCTCTGCTGGCAACCGCGCTGTCTCCACCCAGCCTGAGTGACATC
GAGCGCACCATTCTTCTGTTGAAGGAGGTTGGAGCACTGGCAGTTAGTGGGCAGAGAGAGGACG
AAAACCCTCATGATGGTGAATTGACCTTCCTGGGAAGAGTGCTGGCACAGCTCCCTGTCAGTCA
GCAGCTGGGTAAACTCATTGTGCTGGGACATGTATTTGGGTGCCTGGATGAGTGTCTCATCATA
GCGGCAGCTCTTTCTCTGAAGAACTTTTTCACGATGCCTTTTCGACAGCATCTGGATGGATATA
GGAACAAAGTGCACTTCTCAGGAAGTAGCAGGAGTGACTGCCTGGCACTTGTGGAGGCGTTCAG
GGCCTGGCAGGCTTGCAGACAGCGAGGAGAGCTGCGGCATCCCAAGGATGAACTTGACTGGGGA
CGGCTGAATTACATTCAAATAAAGAGAATCAGAGAGGTTGTACTAGCTGGTGCTTTTTATCCGA
ATTACTTTACTTTTGGACAGCCAGACGAGGAGATGGCAGTAAGGGAGCTGGCAGGCAGAGACCC
AAAGACAACAGTCGTGCTGAAGCACATCCCCCCCTATGGATTTCTTTACTACAAGCAACTGCAG
TCTCTCTTCAGACAGTGCGGTCAAGTCAAATCCATTGTGTTTGATGGCGCAAAAGCCTTTGTGG
AGTTTTCACGGAATCCGACAGAAAGATTTAAGACCCTCCCTGCTGTGAACTTGGCAGTCAAGAT
GTCCCAGTTAAAAGTGTCCCTTGAGCTCAGTATCCATGCCGCAGAGGAGATCGAGGGGAAGGTG
CAAGGCGGGTCGGTGTCAAAGCTCAGGAACACAAGGGTGAATGTGGACTTCCAGAAGCAGACAG
TAGACCCCATGCAAGTGTCATTCAACACCCTGGACAGACCCCGGACAGTAGCAGATCTCCTCCT
GACAGTTGATGTCACTGAGGTGGCCTTATGTGCCCACACTCTTCTCCTGCAGGTGGTAGAAGTG
GGGCACTTCTGGGGGTACAGGATCGACGAGAGGAACGCAGAGCTGCTGAGACAACTGACTGCTG
AGATAAACCGCCTAGAGCTGGTTCCTCTGCCTATCCACCCGCATCCGGACTTAGTCTGCCTGGC
ACCTTTCACTGATTACAACAAGGAGAGCTACTTTAGAGCTCAAATTCTTTATGTTTCGGGAAAT
TCTGCTGAGGTATTCTTTGTAGACTATGGGAATAGGTCTCATGTAGACCTAGATCTCCTGAGGG
AGATCCCCTGTCAGCTTTTGGAGCTTCCATTTCAGGCTTTGGAATTCAAGATTTGCAAAATGCG
ACCATCAGCAAAGTCTCTCATCTGTGGAGAGCACTGGAGTGGAGGCGCCAATGGGCGGTTTGCC
GCCCTGGTCAGCGGCTGCCCTCTCCTGGTGAAGGTGTTCTCCATTGTACACAGCGTCCTGCACG
TGGACGTGTACCGATACTCGGGCGCCCAGGATGCCGTCAACATCAGAGACGTTCTCATCAGGGA
GGGCTATGCTGAGCTTGCAGAGGAGTCCTATGAGTCCAAACAAAGCTATGAAGTCCTCAAGGGT
TTCTTTGCTAAGTCAGTGGACACCATGCCGGATGGCTCTGTGTCCTCTCCTATGAAGGACGACG
AGAAGCATCTCATCCAGATTCTGTTGGAGAGCTTTGCTTCCAATCGGCTGGGTGCTCCAAACTG
CAAGGCTGTCCTCCACGGGCCTTTTAATCCTTATGAGCTGAAGTGTCATAGTCTGACCAGAATA
TCCAAGTTCAGATGTGTGTGGATTGAGAAGGAGAGCATCAATTCTGTGGTCATCAGCGACAGCC
CTGCCGACCTGCACCAGAGGATGCTGGTTGCAGCTTCACTCTCAGTTAACGAGACTGGGTCCAC
CATGCTCCTGAGAGAGACTTCCCTGATGCCTCACATCCCAGGCCTCCCCGCACTCCTCAGCATG
CTGTTCGCACCGGTGATGGAGTTAAGAGTTGACCGTGAAGGAAAGTGTTACACTGGGGTGCTTT
GTGGTTTGGGGTGGAATTCAACTACGGAGGCCCCTATACTGCCAGAGCATGACATTGAGCTGGC
CTTTGATGTGTGCTTCAACGTGGAGGACATCGTTGAGATTAATATTCTCAGGGCTGCTATCAAC
AAGCTAGCGTGTGATGGGCCACATGGACCCAAGTATCTTGGGCCTGAGAGAATTGCTCAGTTGC
AGGAGAATGCACGTCAGAAACTTCTAGGCTTGTTCTGTCGGTTGAAACCACGAGAGAAGATTAC
TCCTCAGTGGCATGAGAAACCCTACGAGTGGAACCAGGGCTATCACTGGACAAGCTGCCATTGC
AGACTTCGGCATGGAACCCTGAGCTTGCGGTGCAGGGCCCATGAAGTTGGCCGCATACTGGAAA
GTCATGGGAAGTAGAGCTGTACTTGAGAGTTAGTGCGCTTTAGAAAACTTTGTTTTAAATAAGT
GCCCCCAAGTCACTGCTCCCACACACACACACACACACGTGTGTGGGAGATTTCTCAGTGAGAG
TTACCCCAGTATTAAACATCAGTCTTGAAGTGTTTGATGGGGGCAGCAAAATGGTTTAGCTTGA
TTAGTCACCTTAGAGTCACATGGTGACAGGAGAGCTCCATCTGTCTCAGGCTGCCCTCTAACCT
TACACGTGTGCTGTGGCACATGCACAAACGCATGTGCACACACAAATGAAATTTCAAAACCCCA
CAATGTGTATTAAAGTGGATGACCAGGTATGTGGGGTGAATTGTGAAAGTGGAGAAGCATCTGC
AAATAGTTTTGTAAAATGGAAAGAACACTTGTCTGTCTTATATGTCCATATCTGTGAGCACATA
GTTTTCTGAATTTGGTGTCTAGACTGGTTTCATCCAGAGCCTGACTTGCTGCTTCTCCTCTCTG
CAT

hide sequence

RefSeq Acc Id:

XM_039113387 ⟹ XP_038969315

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	136,884,985 - 136,965,473 (+)	NCBI
mRatBN7.2	6	131,063,836 - 131,144,324 (+)	NCBI

RefSeq Acc Id:

XM_039113388 ⟹ XP_038969316

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	136,902,735 - 136,965,476 (+)	NCBI
mRatBN7.2	6	131,081,592 - 131,144,327 (+)	NCBI

RefSeq Acc Id:

XM_039113391 ⟹ XP_038969319

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	136,850,798 - 136,918,718 (+)	NCBI
mRatBN7.2	6	131,029,645 - 131,097,584 (+)	NCBI

RefSeq Acc Id:

XM_063261791 ⟹ XP_063117861

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	136,850,798 - 136,966,225 (+)	NCBI

RefSeq Acc Id:

XR_010052076

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	136,850,797 - 136,947,375 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001406506	(Get FASTA)	NCBI Sequence Viewer
	XP_008763207	(Get FASTA)	NCBI Sequence Viewer
	XP_017450003	(Get FASTA)	NCBI Sequence Viewer
	XP_017450004	(Get FASTA)	NCBI Sequence Viewer
	XP_017450005	(Get FASTA)	NCBI Sequence Viewer
	XP_038969315	(Get FASTA)	NCBI Sequence Viewer
	XP_038969316	(Get FASTA)	NCBI Sequence Viewer
	XP_038969319	(Get FASTA)	NCBI Sequence Viewer
	XP_063117861	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI04676	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000073728
	ENSRNOP00000073728.1
	ENSRNOP00000111390
GenBank Protein	Q3MHU3	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_008763207 ⟸ XM_008764985
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6AIH4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLRKLTVDQINDWFTIGKTVTNVELLGLPPAFPAEAPREEVQRSEEVPSEAPTAQAQDPVKATA LARPASAFGRSLSQRSSEVEYINKYRQLEAQELDIYGQDQPPSGPGLRSPLAKISNVACIPETT YKYPDLPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYTQRSAFCNIVVTQPRKI GASSIARWISKERSWTLGGLVGYQVGLEKTATEDTRLIYMTTGVLLQKIVSAKSLMEFTHVFID EVHERTEEMDFLLLVVRKLLRTNSRFVKVILMSATINCKQFADYFAVPVQNKMNPAYVFEVEGK PHTIEQYYLNDLGHIYHSGLPPYRLEEPVITKDVYEVAVSLIQMFDDLDMKESGNKTWSGAQFV SERSSVLVFLPGLGEINYMHELLTNMIHKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTN IAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCYRLIH RDFWDSAIPDHVVPEMLRCPLGSTVLKVKLLDMGEPRALLATALSPPSLSDIERTILLLKEVGA LAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFTM PFRQHLDGYRNKVHFSGSSRSDCLALVEAFRAWQACRQRGELRHPKDELDWGRLNYIQIKRIRE VAELYEELKNRISQFNMFVDPRHPVLDQEYPYKQRFILQVVLAGAFYPNYFTFGQPDEEMAVRE LAGRDPKTTVVLKHIPPYGFLYYKQLQSLFRQCGQVKSIVFDGAKAFVEFSRNPTERFKTLPAV NLAVKMSQLKVSLELSIHAAEEIEGKVQGGSVSKLRNTRVNVDFQKQTVDPMQVSFNTLDRPRT VADLLLTVDVTEVVEVGHFWGYRIDERNAELLRQLTAEINRLELVPLPIHPHPDLVCLAPFTDY NKESYFRAQILYVSGNSAEVFFVDYGNRSHVDLDLLREIPCQLLELPFQALEFKICKMRPSAKS LICGEHWSGGANGRFAALVSGCPLLVKVFSIVHSVLHVDVYRYSGAQDAVNIRDVLIREGYAEL AEESYESKQSYEVLKGFFAKSVDTMPDGSVSSPMKDDEKHLIQILLESFASNRLGAPNCKAVLH GPFNPYELKCHSLTRISKFRCVWIEKESINSVVISDSPADLHQRMLVAASLSVNETGSTMLLRE TSLMPHIPGLPALLSMLFAPVMELRVDREGKCYTGVLCGLGWNSTTEAPILPEHDIELAFDVCF NVEDIVEINILRAAINKLACDGPHGPKYLGPERIAQLQENARQKLLGLFCRLKPREKITPQWHE KPYEWNQGYHWTSCHCRLRHGTLSLRCRAHEVGRILESHGK hide sequence

RefSeq Acc Id:	XP_017450005 ⟸ XM_017594516
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6AIH4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLRKLTVDQINDWFTIGKTVTNVELLGLPPAFPAEAPREEVQRSEEVPSEAPTAQAQDPVKATA LARPASAFGRSLSQRSSEVEYINKYRQLEAQELDIYGQDQPPSGPGLRSPLAKISNVACIPETT YKYPDLPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYTQRSAFCNIVVTQPRKI GASSIARWISKERSWTLGGLVGYQVGLEKTATEDTRLIYMTTGVLLQKIVSAKSLMEFTHVFID EVHERTEEMDFLLLVVRKLLRTNSRFVKVILMSATINCKQFADYFAVPVQNKMNPAYVFEVEGK PHTIEQYYLNDLGHIYHSGLPPYRLEEPVITKDVYEVAVSLIQMFDDLDMKESGNKTWSGAQFV SERSSVLVFLPGLGEINYMHELLTNMIHKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTN IAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCYRLIH RDFWDSAIPDHVVPEMLRCPLGSTVLKVKLLDMGEPRALLATALSPPSLSDIERTILLLKEVGA LAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFTM PFRQHLDGYRNKVHFSGSSRSDCLALVEAFRAWQACRQRGELRHPKDELDWGRLNYIQIKRIRE VVLAGAFYPNYFTFGQPDEEMAVRELAGRDPKTTVVLKHIPPYGFLYYKQLQSLFRQCGQVKSI VFDGAKAFVEFSRNPTERFKTLPAVNLAVKMSQLKVSLELSIHAAEEIEGKVQGGSVSKLRNTR VNVDFQKQTVDPMQVSFNTLDRPRTVADLLLTVDVTEVALCAHTLLLQVVEVGHFWGYRIDERN AELLRQLTAEINRLELVPLPIHPHPDLVCLAPFTDYNKESYFRAQILYVSGNSAEVFFVDYGNR SHVDLDLLREIPCQLLELPFQALEFKICKMRPSAKSLICGEHWSGGANGRFAALVSGCPLLVKV FSIVHSVLHVDVYRYSGAQDAVNIRDVLIREGYAELAEESYESKQSYEVLKGFFAKSVDTMPDG SVSSPMKDDEKHLIQILLESFASNRLGAPNCKAVLHGPFNPYELKCHSLTRISKFRCVWIEKES INSVVISDSPADLHQRMLVAASLSVNETGSTMLLRETSLMPHIPGLPALLSMLFAPVMELRVDR EGKCYTGVLCGLGWNSTTEAPILPEHDIELAFDVCFNVEDIVEINILRAAINKLACDGPHGPKY LGPERIAQLQENARQKLLGLFCRLKPREKITPQWHEKPYEWNQGYHWTSCHCRLRHGTLSLRCR AHEVGRILESHGK hide sequence

RefSeq Acc Id:	XP_017450004 ⟸ XM_017594515
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AIH4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLRKLTVDQINDWFTIGKTVTNVELLGLPPAFPAEAPREEVQRSEEVPSEAPTAQAQDPVKATA LARPASAFGRSLSQRSSEVEYINKYRQLEAQELDIYGQDQPPSGPGLRSPLAKISNVACIPETT YKYPDLPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYTQRSAFCNIVVTQPRKI GASSIARWISKERSWTLGGLVGYQVGLEKTATEDTRLIYMTTGVLLQKIVSAKSLMEFTHVFID EVHERTEEMDFLLLVVRKLLRTNSRFVKVILMSATINCKQFADYFAVPVQNKMNPAYVFEVEGK PHTIEQYYLNDLGHIYHSGLPPYRLEEPVITKDVYEVAVSLIQMFDDLDMKESGNKTWSGAQFV SERSSVLVFLPGLGEINYMHELLTNMIHKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTN IAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCYRLIH RDFWDSAIPDHVVPEMLRCPLGSTVLKVKLLDMGEPRALLATALSPPSLSDIERTILLLKEVGA LAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFTM PFRQHLDGYRNKVHFSGSSRSDCLALVEAFRAWQACRQRGELRHPKDELDWGRLNYIQIKRIRE VAELYEELKNRISQFNMFVDPRHPVLDQEYPYKQRFILQVVLAGAFYPNYFTFGQPDEEMAVRE LAGRDPKTTVVLKHIPPYGFLYYKQLQSLFRQCGQVKSIVFDGAKAFVEFSRNPTERFKTLPAV NLAVKMSQLKVSLELSIHAAEEIEGKVQGGSVSKLRNTRVNVDFQKQTVDPMQVSFNTLDRPRT VADLLLTVDVTEVALCAHTLLLQVVEVGHFWGYRIDERNAELLRQLTAEINRLELVPLPIHPHP DLVCLAPFTDYNKESYFRAQILYVSGNSAEVFFVDYGNRSHVDLDLLREIPCQLLELPFQALEF KICKMRPSAKSLICGEHWSGGANGRFAALVSGCPLLVKVFSIVHSVLHVDVYRYSGAQDAVNIR DVLIREGYAELAEESYESKQSYEVLKGFFAKSVDTMPDGSVSSPMKDDEKHLIQILLESFASNR LGAPNCKAVLHGPFNPYELKCHSLTRISKFRCVWIEKESINSVVISDSPADLHQRMLVAASLSV NETGSTMLLRETSLMPHIPGLPALLSMLFAPVMELRVDREGKCYTGVLCGLGWNSTTEAPILPE HDIELAFDVCFNVEDIVEINILRAAINKLACDGPHGPKYLGPERIAQLQENARQKLLGLFCRLK PREKITPQWHEKPYEWNQVDPRLVIEQAEREGGPGKSTCLYQLHTPVVLSP hide sequence

RefSeq Acc Id:	XP_017450003 ⟸ XM_017594514
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6AIH4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLRKLTVDQINDWFTIGKTVTNVELLGLPPAFPAEAPREEVQRSEEVPSEAPTAQAQDPVKATA LARPASAFGRSLSQRSSEVEYINKYRQLEAQELDIYGQDQPPSGPGLRSPLAKISNVACIPETT YKYPDLPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYTQRSAFCNIVVTQPRKI GASSIARWISKERSWTLGGLVGYQVGLEKTATEDTRLIYMTTGVLLQKIVSAKSLMEFTHVFID EVHERTEEMDFLLLVVRKLLRTNSRFVKVILMSATINCKQFADYFAVPVQNKMNPAYVFEVEGK PHTIEQYYLNDLGHIYHSGLPPYRLEEPVITKDVYEVAVSLIQMFDDLDMKESGNKTWSGAQFV SERSSVLVFLPGLGEINYMHELLTNMIHKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTN IAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCYRLIH RDFWDSAIPDHVVPEMLRCPLGSTVLKVKLLDMGEPRALLATALSPPSLSDIERTILLLKEVGA LAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLIVLGHVFGCLDECLIIAAALSLKNFFTM PFRQHLDGYRNKVHFSGSSRSDCLALVEAFRAWQACRQRGELRHPKDELDWGRLNYIQIKRIRE VAELYEELKNRISQFNMFVDPRHPVLDQEYPYKQRFILQVVLAGAFYPNYFTFGQPDEEMAVRE LAGRDPKTTVVLKHIPPYGFLYYKQLQSLFRQCGQVKSIVFDGAKAFVEFSRNPTERFKTLPAV NLAVKMSQLKVSLELSIHAAEEIEGKVQGGSVSKLRNTRVNVDFQKQTVDPMQVSFNTLDRPRT VADLLLTVDVTEVALCAHTLLLQVVEVGHFWGYRIDERNAELLRQLTAEINRLELVPLPIHPHP DLVCLAPFTDYNKESYFRAQILYVSGNSAEVFFVDYGNRSHVDLDLLREIPCQLLELPFQALEF KICKMRPSAKSLICGEHWSGGANGRFAALVSGCPLLVKVFSIVHSVLHVDVYRYSGAQDAVNIR DVLIREGYAELAEESYESKQSYEVLKGFFAKSVDTMPDGSVSSPMKDDEKHLIQILLESFASNR LGAPNCKAVLHGPFNPYELKCHSLTRISKFRCVWIEKESINSVVISDSPADLHQRMLVAASLSV NETGSTMLLRETSLMPHIPGLPALLSMLFAPVMELRVDREGKCYTGVLCGLGWNSTTEAPILPE HDIELAFDVCFNVEDIVEINILRAAINKLACDGPHGPKYLGPERIAQLQENARQKLLGLFCRLK PREKITPQWHEKPYEWNQGYHWTSCHCRLRHGTLSLRCRAHEVGRILESHGK hide sequence

Ensembl Acc Id:

ENSRNOP00000073728 ⟸ ENSRNOT00000086594

RefSeq Acc Id:	XP_038969319 ⟸ XM_039113391
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038969315 ⟸ XM_039113387
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6AIH4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038969316 ⟸ XM_039113388
- Peptide Label:	isoform X7

Ensembl Acc Id:

ENSRNOP00000093190 ⟸ ENSRNOT00000110617

RefSeq Acc Id:	NP_001406506 ⟸ NM_001419577
- UniProtKB:	Q3MHU3 (UniProtKB/Swiss-Prot), A0A8I6AIH4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063117861 ⟸ XM_063261791
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6AIH4 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000111390 ⟸ ENSRNOT00000171820

Protein Domains

Helicase ATP-binding Helicase C-terminal Tudor

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q3MHU3-F1-model_v2	AlphaFold	Q3MHU3	1-1384	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306942	AgrOrtholog
BioCyc Gene	G2FUF-35815	BioCyc
Ensembl Genes	ENSRNOG00000053631	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000086594	ENTREZGENE
	ENSRNOT00000086594.2	UniProtKB/Swiss-Prot
	ENSRNOT00000171820	ENTREZGENE
Gene3D-CATH	1.20.120.1080	UniProtKB/Swiss-Prot
	2.30.30.140	UniProtKB/Swiss-Prot
	2.40.50.90	UniProtKB/Swiss-Prot
	3.40.50.300	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7135228	IMAGE-MGC_LOAD
InterPro	DEAD/DEAH_box_helicase_dom	UniProtKB/Swiss-Prot
	Helicase-assoc_dom	UniProtKB/Swiss-Prot
	Helicase_ATP-bd	UniProtKB/Swiss-Prot
	Helicase_C	UniProtKB/Swiss-Prot
	P-loop_NTPase	UniProtKB/Swiss-Prot
	SNase_OB-fold_sf	UniProtKB/Swiss-Prot
	Tudor	UniProtKB/Swiss-Prot
	Tudor_TDRD9	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:95321	IMAGE-MGC_LOAD
NCBI Gene	299343	ENTREZGENE
PANTHER	ATP-DEPENDENT RNA HELICASE	UniProtKB/Swiss-Prot
	ATP-DEPENDENT RNA HELICASE TDRD9	UniProtKB/Swiss-Prot
Pfam	DEAD	UniProtKB/Swiss-Prot
	HA2_C	UniProtKB/Swiss-Prot
	Helicase_C	UniProtKB/Swiss-Prot
	TUDOR	UniProtKB/Swiss-Prot
PhenoGen	Tdrd9	PhenoGen
PROSITE	HELICASE_ATP_BIND_1	UniProtKB/Swiss-Prot
	HELICASE_CTER	UniProtKB/Swiss-Prot
	TUDOR	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000053631	RatGTEx
SMART	DEXDc	UniProtKB/Swiss-Prot
	HA2	UniProtKB/Swiss-Prot
	HELICc	UniProtKB/Swiss-Prot
	TUDOR	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF52540	UniProtKB/Swiss-Prot
	Tudor/PWWP/MBT	UniProtKB/Swiss-Prot
UniProt	A0A8I6AIH4	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LKC9_RAT	UniProtKB/TrEMBL
	Q3MHU3	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-12-06	Tdrd9	tudor domain containing 9	Tdrd9_predicted	tudor domain containing 9 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Tdrd9_predicted	tudor domain containing 9 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM