Dock5 (dedicator of cytokinesis 5) - Rat Genome Database

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Gene: Dock5 (dedicator of cytokinesis 5) Rattus norvegicus
Analyze
Symbol: Dock5
Name: dedicator of cytokinesis 5
RGD ID: 1306872
Description: Predicted to enable guanyl-nucleotide exchange factor activity and small GTPase binding activity. Predicted to be involved in several processes, including Rac protein signal transduction; positive regulation of cell migration; and positive regulation of substrate adhesion-dependent cell spreading. Predicted to act upstream of or within bone remodeling and podosome assembly. Predicted to be located in podosome. Predicted to be active in cytoplasm and plasma membrane. Orthologous to human DOCK5 (dedicator of cytokinesis 5); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: dedicator of cytokinesis protein 5; LOC305987
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81546,155,124 - 46,334,127 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1546,155,125 - 46,334,042 (-)EnsemblGRCr8
mRatBN7.21541,979,728 - 42,158,733 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1541,979,729 - 42,158,649 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1543,844,391 - 44,023,294 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01544,994,614 - 45,173,520 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01543,439,945 - 43,618,862 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01544,449,108 - 44,627,774 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1544,453,308 - 44,627,765 (-)Ensemblrn6Rnor6.0
Rnor_5.01546,969,497 - 47,148,088 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41547,313,859 - 47,491,774 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1541,643,960 - 41,822,851 (-)NCBICelera
RGSC_v3.11547,330,683 - 47,462,329 (-)NCBI
Cytogenetic Map15p12NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
1-chloro-2,4-dinitrobenzene  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
2,4,6-tribromophenol  (ISO)
2,4-dinitrotoluene  (EXP)
3,3',5,5'-tetrabromobisphenol A  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
acrylamide  (EXP)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amiodarone  (ISO)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[e]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
butanal  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
calcitriol  (ISO)
CGP 52608  (ISO)
chloroprene  (ISO)
Cuprizon  (EXP)
cyclosporin A  (ISO)
cylindrospermopsin  (ISO)
decabromodiphenyl ether  (ISO)
Dibutyl phosphate  (ISO)
dicrotophos  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
entinostat  (ISO)
epoxiconazole  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
gentamycin  (EXP)
glyphosate  (ISO)
methapyrilene  (ISO)
methoxychlor  (EXP)
mono(2-ethylhexyl) phthalate  (ISO)
monobenzyl phthalate  (ISO)
Monobutylphthalate  (ISO)
monoethyl phthalate  (ISO)
niclosamide  (ISO)
oxaliplatin  (EXP)
ozone  (EXP,ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (ISO)
potassium chromate  (ISO)
propanal  (ISO)
quercetin  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
titanium dioxide  (ISO)
topotecan  (EXP)
triphenyl phosphate  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA,IEA,ISO)
cytosol  (IEA,ISO)
membrane  (IEA)
plasma membrane  (IBA,IEA,ISO)
podosome  (IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:18396277   PMID:19004829   PMID:22158624  


Genomics

Comparative Map Data
Dock5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81546,155,124 - 46,334,127 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1546,155,125 - 46,334,042 (-)EnsemblGRCr8
mRatBN7.21541,979,728 - 42,158,733 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1541,979,729 - 42,158,649 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1543,844,391 - 44,023,294 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01544,994,614 - 45,173,520 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01543,439,945 - 43,618,862 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01544,449,108 - 44,627,774 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1544,453,308 - 44,627,765 (-)Ensemblrn6Rnor6.0
Rnor_5.01546,969,497 - 47,148,088 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41547,313,859 - 47,491,774 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1541,643,960 - 41,822,851 (-)NCBICelera
RGSC_v3.11547,330,683 - 47,462,329 (-)NCBI
Cytogenetic Map15p12NCBI
DOCK5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38825,184,689 - 25,415,711 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl825,184,689 - 25,418,082 (+)Ensemblhg38GRCh38
GRCh37825,042,204 - 25,273,227 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36825,098,204 - 25,326,536 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34825,098,203 - 25,326,535NCBI
Celera824,006,779 - 24,231,488 (+)NCBICelera
Cytogenetic Map8p21.2NCBI
HuRef823,646,114 - 23,815,584 (+)NCBIHuRef
CHM1_1825,243,660 - 25,472,059 (+)NCBICHM1_1
T2T-CHM13v2.0825,463,647 - 25,690,937 (+)NCBIT2T-CHM13v2.0
Dock5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391467,989,377 - 68,171,021 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1467,989,584 - 68,170,891 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381467,751,928 - 67,933,572 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1467,752,135 - 67,933,442 (-)Ensemblmm10GRCm38
MGSCv371468,369,985 - 68,551,629 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361466,705,258 - 66,886,902 (-)NCBIMGSCv36mm8
Celera1465,509,536 - 65,693,300 (-)NCBICelera
Cytogenetic Map14D1NCBI
cM Map1434.66NCBI
Dock5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540348,146,084 - 48,338,218 (+)Ensembl
ChiLan1.0NW_00495540348,146,616 - 48,338,218 (+)NCBIChiLan1.0ChiLan1.0
DOCK5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2743,723,728 - 43,956,881 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1819,438,094 - 19,671,268 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0824,463,582 - 24,696,736 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1821,372,756 - 21,605,877 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl821,372,756 - 21,605,877 (+)EnsemblpanPan2panpan1.1
DOCK5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12532,046,165 - 32,257,011 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2532,046,527 - 32,283,658 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2532,630,797 - 32,841,994 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02532,245,463 - 32,457,029 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2532,248,523 - 32,457,282 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12532,201,136 - 32,412,574 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02532,050,626 - 32,261,933 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02532,216,436 - 32,428,154 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Dock5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494310,038,136 - 10,219,086 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367571,289,954 - 1,576,984 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049367571,289,941 - 1,419,257 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DOCK5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl149,197,293 - 9,436,249 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1149,197,280 - 9,438,715 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21410,412,335 - 10,593,481 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DOCK5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1823,310,524 - 23,540,174 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl823,310,673 - 23,540,478 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605218,627,353 - 18,861,082 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dock5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475820,255,062 - 20,440,370 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462475820,255,036 - 20,444,194 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Dock5
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11256,545,538 - 56,725,147 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Dock5
733 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:113
Count of miRNA genes:96
Interacting mature miRNAs:102
Transcripts:ENSRNOT00000030384, ENSRNOT00000058887
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1641913Colcr2Colorectal carcinoma resistance QTL 26.570.0197intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)15231575947315759Rat
1300144Rf23Renal function QTL 233.61renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)1544806773104695021Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15231575953331089Rat
152025253Hrtrt24Heart rate QTL 243.82heart pumping trait (VT:2000009)153185580392671517Rat
1582227Gluco30Glucose level QTL 303.60.0003blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)154367724488677244Rat
10054130Srcrt8Stress Responsive Cort QTL 82.180.0085blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)152852773273527732Rat
1582228Epfw3Epididymal fat weight QTL 34.10.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)154367724488677244Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)1525285835104695021Rat
2324620Coatc3Coat color QTL 3coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)152233635152597086Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)1525285835104695021Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151915576287086765Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)15278592347785923Rat
1598828Glom14Glomerulus QTL 142.5kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)154046315285463152Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151492659471614418Rat
631550Bw7Body weight QTL 73.6body mass (VT:0001259)body weight (CMO:0000012)152233635167336351Rat
1582242Gluco28Glucose level QTL 283.30.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)154367724488677244Rat
2306968Anxrr23Anxiety related response QTL 234.83reflex trait (VT:0001961)amplitude of the acoustic startle response (CMO:0001520)154480677352597086Rat
1582244Bw79Body weight QTL 7940.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)154367724488677244Rat
1578660Bss19Bone structure and strength QTL 194.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)1525285835104695021Rat
7411725Strs7Sensitivity to stroke QTL 73.8cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)154446544756583797Rat
1582214Stl21Serum triglyceride level QTL 213.10.022blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)154367724488677244Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 163 91 90 59 92 59 6 356 192 11 142 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000058887   ⟹   ENSRNOP00000055674
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1546,155,125 - 46,334,004 (-)Ensembl
mRatBN7.2 Ensembl1541,979,870 - 42,158,649 (-)Ensembl
Rnor_6.0 Ensembl1544,453,308 - 44,627,765 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000110516   ⟹   ENSRNOP00000094403
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1546,155,125 - 46,283,045 (-)Ensembl
mRatBN7.2 Ensembl1541,979,729 - 42,107,652 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000112046   ⟹   ENSRNOP00000077193
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1546,155,125 - 46,334,042 (-)Ensembl
mRatBN7.2 Ensembl1541,979,729 - 42,158,649 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000129151   ⟹   ENSRNOP00000107171
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1546,160,249 - 46,334,042 (-)Ensembl
RefSeq Acc Id: NM_001372012   ⟹   NP_001358941
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81546,155,124 - 46,334,042 (-)NCBI
mRatBN7.21541,979,728 - 42,158,649 (-)NCBI
RefSeq Acc Id: XM_039093338   ⟹   XP_038949266
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81546,155,130 - 46,334,124 (-)NCBI
mRatBN7.21541,979,728 - 42,158,732 (-)NCBI
RefSeq Acc Id: XM_039093339   ⟹   XP_038949267
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81546,170,884 - 46,334,127 (-)NCBI
mRatBN7.21541,995,494 - 42,158,733 (-)NCBI
RefSeq Acc Id: XM_063274295   ⟹   XP_063130365
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81546,155,130 - 46,290,527 (-)NCBI
RefSeq Acc Id: XR_010057823
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81546,194,963 - 46,334,127 (-)NCBI
Ensembl Acc Id: ENSRNOP00000055674   ⟸   ENSRNOT00000058887
RefSeq Acc Id: XP_038949266   ⟸   XM_039093338
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ARJ2 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001358941   ⟸   NM_001372012
- UniProtKB: A0A8I5ZK89 (UniProtKB/TrEMBL),   A0A8I6ARJ2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038949267   ⟸   XM_039093339
- Peptide Label: isoform X2
Ensembl Acc Id: ENSRNOP00000077193   ⟸   ENSRNOT00000112046
Ensembl Acc Id: ENSRNOP00000094403   ⟸   ENSRNOT00000110516
RefSeq Acc Id: XP_063130365   ⟸   XM_063274295
- Peptide Label: isoform X1
- UniProtKB: A0A8I6ARJ2 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000107171   ⟸   ENSRNOT00000129151
Protein Domains
C2 DOCK-type   DOCKER   SH3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1LVA9-F1-model_v2 AlphaFold F1LVA9 1-1868 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699770
Promoter ID:EPDNEW_R10288
Type:multiple initiation site
Name:Dock5_1
Description:dedicator of cytokinesis 5
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01544,627,779 - 44,627,839EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306872 AgrOrtholog
BioCyc Gene G2FUF-13299 BioCyc
Ensembl Genes ENSRNOG00000024703 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000058887 ENTREZGENE
  ENSRNOT00000058887.7 UniProtKB/TrEMBL
  ENSRNOT00000110516.2 UniProtKB/TrEMBL
  ENSRNOT00000112046 ENTREZGENE
  ENSRNOT00000112046.2 UniProtKB/TrEMBL
  ENSRNOT00000129151.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1270.350 UniProtKB/TrEMBL
  1.20.58.740 UniProtKB/TrEMBL
  1.25.40.410 UniProtKB/TrEMBL
  2.60.40.150 UniProtKB/TrEMBL
  SH3 Domains UniProtKB/TrEMBL
InterPro ARM-type_fold UniProtKB/TrEMBL
  C2_domain_sf UniProtKB/TrEMBL
  DHR-2 UniProtKB/TrEMBL
  DOCK UniProtKB/TrEMBL
  DOCK-C2 UniProtKB/TrEMBL
  DOCK1/DOCK5 UniProtKB/TrEMBL
  DOCK1_5_SH3 UniProtKB/TrEMBL
  DOCK_C_lobe_A UniProtKB/TrEMBL
  DOCK_C_lobe_C UniProtKB/TrEMBL
  DOCK_N UniProtKB/TrEMBL
  DOCK_N_sub1 UniProtKB/TrEMBL
  DOCKER_Lobe_A UniProtKB/TrEMBL
  DOCKER_Lobe_B UniProtKB/TrEMBL
  DOCKER_Lobe_C UniProtKB/TrEMBL
  SH3-like_dom UniProtKB/TrEMBL
  SH3_domain UniProtKB/TrEMBL
  TPR_DOCK UniProtKB/TrEMBL
NCBI Gene 305987 ENTREZGENE
PANTHER PTHR45653 UniProtKB/TrEMBL
  PTHR45653:SF3 UniProtKB/TrEMBL
Pfam Ded_cyto UniProtKB/TrEMBL
  DHR-2_Lobe_B UniProtKB/TrEMBL
  DHR-2_Lobe_C UniProtKB/TrEMBL
  DOCK-C2 UniProtKB/TrEMBL
  DOCK_N UniProtKB/TrEMBL
  SH3_1 UniProtKB/TrEMBL
  TPR_DOCK UniProtKB/TrEMBL
PhenoGen Dock5 PhenoGen
PROSITE DHR_1 UniProtKB/TrEMBL
  DHR_2 UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000024703 RatGTEx
SMART SH3 UniProtKB/TrEMBL
Superfamily-SCOP ARM-type_fold UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
UniProt A0A8I5ZK89 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6ARJ2 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LQC9_RAT UniProtKB/TrEMBL
  F1LVA9_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Dock5  dedicator of cytokinesis 5   Dock5_predicted  dedicator of cytokinesis 5 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Dock5_predicted  dedicator of cytokinesis 5 (predicted)      Symbol and Name status set to approved 70820 APPROVED