Mrpl1 (mitochondrial ribosomal protein L1) - Rat Genome Database

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Gene: Mrpl1 (mitochondrial ribosomal protein L1) Rattus norvegicus
Analyze
Symbol: Mrpl1
Name: mitochondrial ribosomal protein L1
RGD ID: 1306850
Description: Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in mitochondrion and ribosome. Predicted to be part of large ribosomal subunit. Orthologous to human MRPL1 (mitochondrial ribosomal protein L1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4,6-trinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: 39S ribosomal protein L1, mitochondrial; large ribosomal subunit protein uL1m; LOC100359687; LOC289491; mitochondrial ribosomal protein L1-like
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81413,604,498 - 13,663,633 (-)NCBIGRCr8
mRatBN7.21413,300,522 - 13,359,654 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1413,300,522 - 13,359,721 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1413,267,793 - 13,327,734 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01414,567,648 - 14,627,589 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01413,284,132 - 13,344,073 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01414,951,507 - 15,008,136 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1414,951,495 - 15,008,150 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01414,893,399 - 14,944,235 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41414,813,544 - 14,872,680 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11414,813,544 - 14,873,482 (-)NCBI
Celera1413,347,923 - 13,406,905 (-)NCBICelera
Cytogenetic Map14p22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 67 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mrpl1Rat1,2-dimethylhydrazine decreases expressionISOMrpl1 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of MRPL1 mRNACTDPMID:22206623
Mrpl1Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOMrpl1 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of MRPL1 mRNACTDPMID:19770486
Mrpl1Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of MRPL1 mRNACTDPMID:33387578
Mrpl1Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of MRPL1 mRNACTDPMID:32109520
Mrpl1Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOMrpl1 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of MRPL1 mRNACTDPMID:21570461
Mrpl1Rat2,4,6-trinitrotoluene affects expressionEXP 6480464Trinitrotoluene affects the expression of MRPL1 mRNACTDPMID:21346803
Mrpl1Rat2,6-dinitrotoluene affects expressionEXP 64804642 and 6-dinitrotoluene affects the expression of MRPL1 mRNACTDPMID:21346803
Mrpl1Rat2-hydroxypropanoic acid decreases expressionISOMRPL1 (Homo sapiens)6480464Lactic Acid results in decreased expression of MRPL1 mRNACTDPMID:30851411
Mrpl1Rat2-methylcholine affects expressionISOMRPL1 (Homo sapiens)6480464beta-methylcholine affects the expression of MRPL1 mRNACTDPMID:21179406
Mrpl1Rat4,4'-diaminodiphenylmethane decreases expressionISOMrpl1 (Mus musculus)64804644 and 4'-diaminodiphenylmethane results in decreased expression of MRPL1 mRNACTDPMID:18648102
Mrpl1Rat4,4'-sulfonyldiphenol increases expressionISOMrpl1 (Mus musculus)6480464bisphenol S results in increased expression of MRPL1 mRNACTDPMID:39298647
Mrpl1Rataflatoxin M1 decreases expressionISOMRPL1 (Homo sapiens)6480464Aflatoxin M1 results in decreased expression of MRPL1 mRNACTDPMID:30928695
Mrpl1Ratarsenite(3-) multiple interactionsISOMRPL1 (Homo sapiens)6480464arsenite promotes the reaction [G3BP1 protein binds to MRPL1 mRNA]CTDPMID:32406909
Mrpl1Ratatrazine decreases expressionISOMRPL1 (Homo sapiens)6480464Atrazine results in decreased expression of MRPL1 mRNACTDPMID:22378314
Mrpl1Ratbenzo[a]pyrene decreases expressionISOMrpl1 (Mus musculus)6480464Benzo(a)pyrene results in decreased expression of MRPL1 mRNACTDPMID:20504355
Mrpl1Ratbenzo[a]pyrene decreases methylationISOMRPL1 (Homo sapiens)6480464Benzo(a)pyrene results in decreased methylation of MRPL1 promoterCTDPMID:27901495
Mrpl1Ratbenzo[a]pyrene diol epoxide I decreases expressionISOMRPL1 (Homo sapiens)64804647 more ...CTDPMID:20382639
Mrpl1Ratbis(2-ethylhexyl) phthalate multiple interactionsISOMrpl1 (Mus musculus)6480464[diethyl phthalate co-treated with Diethylhexyl Phthalate co-treated with diisononyl phthalate co-treated with Dibutyl Phthalate co-treated with diisobutyl phthalate co-treated with butylbenzyl phthalate] affects the expression of MRPL1 mRNACTDPMID:39150890
Mrpl1Ratbisphenol A increases expressionEXP 6480464bisphenol A results in increased expression of MRPL1 mRNACTDPMID:25181051
Mrpl1Ratbisphenol A decreases expressionISOMRPL1 (Homo sapiens)6480464bisphenol A results in decreased expression of MRPL1 proteinCTDPMID:34186270

1 to 20 of 67 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mrpl1Rattranslation involved_inIEAInterPro:IPR0058791600115GO_REF:0000002InterProGO_REF:0000002

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mrpl1Ratlarge ribosomal subunit part_ofIEAInterPro:IPR0058791600115GO_REF:0000002InterProGO_REF:0000002
Mrpl1Ratmitochondrion located_inIEAUniProtKB-SubCell:SL-01731600115GO_REF:0000044UniProtGO_REF:0000044
Mrpl1Ratmitochondrion located_inIEAUniProtKB-KW:KW-04961600115GO_REF:0000043UniProtGO_REF:0000043
Mrpl1Ratmitochondrion located_inIEAInterPro:IPR0058791600115GO_REF:0000002InterProGO_REF:0000002
Mrpl1Ratribonucleoprotein complex part_ofIEAUniProtKB-KW:KW-06871600115GO_REF:0000043UniProtGO_REF:0000043
Mrpl1Ratribosome located_inIEAUniProtKB-KW:KW-06891600115GO_REF:0000043UniProtGO_REF:0000043

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Mrpl1Ratprotein binding enablesISOMRPL1 (Homo sapiens)1624291UniProtKB:Q8N0X2-4 more ...RGDPMID:25416956 and PMID:32296183
Mrpl1RatRNA binding enablesIEAInterPro:IPR0058791600115GO_REF:0000002InterProGO_REF:0000002
Mrpl1Ratstructural constituent of ribosome enablesIEAInterPro:IPR0058791600115GO_REF:0000002InterProGO_REF:0000002


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:12477932   PMID:18614015   PMID:22658674   PMID:22681889  



Mrpl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81413,604,498 - 13,663,633 (-)NCBIGRCr8
mRatBN7.21413,300,522 - 13,359,654 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1413,300,522 - 13,359,721 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1413,267,793 - 13,327,734 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01414,567,648 - 14,627,589 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01413,284,132 - 13,344,073 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01414,951,507 - 15,008,136 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1414,951,495 - 15,008,150 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01414,893,399 - 14,944,235 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41414,813,544 - 14,872,680 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11414,813,544 - 14,873,482 (-)NCBI
Celera1413,347,923 - 13,406,905 (-)NCBICelera
Cytogenetic Map14p22NCBI
MRPL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38477,862,830 - 77,952,785 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl477,862,830 - 77,952,785 (+)EnsemblGRCh38hg38GRCh38
GRCh37478,783,984 - 78,873,939 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36479,002,829 - 79,092,968 (+)NCBINCBI36Build 36hg18NCBI36
Build 34479,141,079 - 79,231,116NCBI
Celera476,085,074 - 76,174,865 (+)NCBICelera
Cytogenetic Map4q21.1NCBI
HuRef474,535,751 - 74,625,006 (+)NCBIHuRef
CHM1_1478,760,602 - 78,850,723 (+)NCBICHM1_1
T2T-CHM13v2.0481,202,852 - 81,293,608 (+)NCBIT2T-CHM13v2.0
Mrpl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39596,357,357 - 96,414,586 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl596,357,352 - 96,414,586 (+)EnsemblGRCm39 Ensembl
GRCm38596,209,498 - 96,266,727 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl596,209,493 - 96,266,727 (+)EnsemblGRCm38mm10GRCm38
MGSCv37596,639,134 - 96,695,728 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36596,450,417 - 96,507,011 (+)NCBIMGSCv36mm8
Celera593,553,498 - 93,610,078 (+)NCBICelera
Cytogenetic Map5E3NCBI
cM Map547.29NCBI
Mrpl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554332,353,844 - 2,437,743 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554332,327,830 - 2,436,198 (+)NCBIChiLan1.0ChiLan1.0
MRPL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2352,109,970 - 52,203,131 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1452,296,559 - 52,389,512 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0446,239,491 - 46,331,917 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1452,084,870 - 52,177,179 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl452,085,053 - 52,176,796 (-)Ensemblpanpan1.1panPan2
MRPL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1322,307,485 - 2,457,587 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl322,363,454 - 2,496,034 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3239,434,637 - 39,583,984 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0322,333,281 - 2,484,071 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl322,333,332 - 2,523,023 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1322,332,231 - 2,472,209 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0322,280,434 - 2,419,871 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03237,752,366 - 37,892,634 (-)NCBIUU_Cfam_GSD_1.0
Mrpl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244052859,878,695 - 9,958,409 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366761,553,406 - 1,627,659 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366761,549,018 - 1,628,548 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MRPL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1873,305,444 - 73,423,524 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2877,608,437 - 77,656,868 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MRPL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1726,352,441 - 26,444,150 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660374,707,259 - 4,799,626 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mrpl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475713,090,942 - 13,178,380 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475713,090,942 - 13,178,545 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Mrpl1
283 total Variants

Predicted Target Of
Summary Value
Count of predictions:128
Count of miRNA genes:95
Interacting mature miRNAs:99
Transcripts:ENSRNOT00000002834, ENSRNOT00000039083
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 16 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300114Srn2Serum renin concentration QTL 23.27blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)14381307421217635Rat
2293089Iddm31Insulin dependent diabetes mellitus QTL 314.7blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)14381307418274691Rat
1581500Renag1Renal agenesis QTL 1kidney development trait (VT:0000527)percentage of study population developing unilateral renal agenesis during a period of time (CMO:0000940)14817066868298175Rat
731183Pia20Pristane induced arthritis QTL 203.55joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)14908897839057237Rat
631212Bw5Body weight QTL55.43retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)141103081230320092Rat
2302277Gluco38Glucose level QTL 385.8blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062228035204Rat
1331740Bw26Body weight QTL 263.028body mass (VT:0001259)body weight (CMO:0000012)14381307430767156Rat
619619Rf4Renal disease susceptibility QTL 44.10.002urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)14132754612Rat
1358296Ael3Aortic elastin QTL 33.70.00051aorta elastin amount (VT:0003905)aortic elastin14826709053267090Rat
70195Mcs8Mammary carcinoma susceptibility QTL 84.28mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)14381307424531477Rat

1 to 10 of 16 rows
RH142878  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21413,311,044 - 13,311,284 (+)MAPPERmRatBN7.2
mRatBN7.21413,311,044 - 13,311,284 (-)MAPPERmRatBN7.2
Rnor_6.01414,962,031 - 14,962,270NCBIRnor6.0
Rnor_6.0856,491,312 - 56,491,551NCBIRnor6.0
Rnor_5.01414,903,923 - 14,904,162UniSTSRnor5.0
Rnor_5.0855,073,981 - 55,074,220UniSTSRnor5.0
RGSC_v3.41414,824,067 - 14,824,306UniSTSRGSC3.4
Celera1413,358,445 - 13,358,684UniSTS
Cytogenetic Map14p22UniSTS
RH143703  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81413,663,563 - 13,664,233 (+)Marker Load Pipeline
mRatBN7.21413,359,587 - 13,360,257 (+)MAPPERmRatBN7.2
Rnor_6.01415,008,179 - 15,008,848NCBIRnor6.0
Rnor_5.01414,949,656 - 14,950,325UniSTSRnor5.0
RGSC_v3.41414,872,723 - 14,873,392UniSTSRGSC3.4
Celera1413,406,948 - 13,407,617UniSTS
Cytogenetic Map14p22UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 9 28 94 71 72 43 22 43 6 171 70 77 43 51 29



Ensembl Acc Id: ENSRNOT00000002834   ⟹   ENSRNOP00000002834
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1413,300,522 - 13,351,447 (-)Ensembl
Rnor_6.0 Ensembl1414,951,602 - 15,008,119 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000039083   ⟹   ENSRNOP00000036682
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1413,300,522 - 13,359,721 (-)Ensembl
Rnor_6.0 Ensembl856,411,911 - 56,502,069 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000084617   ⟹   ENSRNOP00000069244
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1413,300,522 - 13,351,578 (-)Ensembl
Rnor_6.0 Ensembl1414,951,495 - 15,008,150 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000085278   ⟹   ENSRNOP00000070016
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1413,300,522 - 13,351,447 (-)Ensembl
Rnor_6.0 Ensembl856,451,240 - 56,501,979 (+)Ensembl
RefSeq Acc Id: NM_001105997   ⟹   NP_001099467
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81413,604,499 - 13,663,521 (-)NCBI
mRatBN7.21413,300,523 - 13,359,545 (-)NCBI
Rnor_6.01414,951,507 - 15,008,136 (-)NCBI
Rnor_5.01414,893,399 - 14,944,235 (-)NCBI
RGSC_v3.41414,813,544 - 14,872,680 (-)RGD
Celera1413,347,923 - 13,406,905 (-)RGD
Sequence:
RefSeq Acc Id: XM_039091670   ⟹   XP_038947598
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81413,604,498 - 13,646,645 (-)NCBI
mRatBN7.21413,300,522 - 13,342,710 (-)NCBI
RefSeq Acc Id: XM_039091672   ⟹   XP_038947600
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81413,604,498 - 13,663,606 (-)NCBI
mRatBN7.21413,300,522 - 13,359,631 (-)NCBI
RefSeq Acc Id: XM_039091673   ⟹   XP_038947601
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81413,639,618 - 13,663,633 (-)NCBI
mRatBN7.21413,335,647 - 13,359,654 (-)NCBI
RefSeq Acc Id: XM_063272899   ⟹   XP_063128969
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81413,606,658 - 13,663,633 (-)NCBI
RefSeq Acc Id: NP_001099467   ⟸   NM_001105997
- UniProtKB: B5DER4 (UniProtKB/TrEMBL),   F1M9A4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000069244   ⟸   ENSRNOT00000084617
Ensembl Acc Id: ENSRNOP00000002834   ⟸   ENSRNOT00000002834
RefSeq Acc Id: XP_038947600   ⟸   XM_039091672
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038947598   ⟸   XM_039091670
- Peptide Label: isoform X1
- UniProtKB: D3ZFE9 (UniProtKB/TrEMBL),   F1M9A4 (UniProtKB/TrEMBL)

Name Modeler Protein Id AA Range Protein Structure
AF-F1M9A4-F1-model_v2 AlphaFold F1M9A4 1-321 view protein structure
AF-D3ZFE9-F1-model_v2 AlphaFold D3ZFE9 1-328 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13699203
Promoter ID:EPDNEW_R9728
Type:multiple initiation site
Name:Mrpl1_1
Description:mitochondrial ribosomal protein L1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01415,008,138 - 15,008,198EPDNEW


1 to 29 of 29 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-16320 BioCyc
Ensembl Genes ENSRNOG00000002070 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOG00000045785 Ensembl
Ensembl Transcript ENSRNOT00000002834 ENTREZGENE
  ENSRNOT00000002834.7 UniProtKB/TrEMBL
  ENSRNOT00000039083.7 UniProtKB/TrEMBL
  ENSRNOT00000084617.2 UniProtKB/TrEMBL
  ENSRNOT00000085278 ENTREZGENE
  ENSRNOT00000085278.2 UniProtKB/TrEMBL
Gene3D-CATH 3.30.190.20 UniProtKB/TrEMBL
  3.40.50.790 UniProtKB/TrEMBL
InterPro Ribosomal_L1/biogenesis UniProtKB/TrEMBL
  Ribosomal_L1_3-a/b-sand UniProtKB/TrEMBL
  Ribosomal_L1_mit UniProtKB/TrEMBL
  Ribosomal_L1_SF UniProtKB/TrEMBL
KEGG Report rno:289491 UniProtKB/TrEMBL
NCBI Gene 289491 ENTREZGENE
PANTHER 39S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL UniProtKB/TrEMBL
  54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL UniProtKB/TrEMBL
Pfam Ribosomal_L1 UniProtKB/TrEMBL
PhenoGen Mrpl1 PhenoGen
RatGTEx ENSRNOG00000002070 RatGTEx
  ENSRNOG00000045785 RatGTEx
Superfamily-SCOP Ribosomal_L1 UniProtKB/TrEMBL
UniProt A0A0G2JUV4_RAT UniProtKB/TrEMBL
  A0A0G2JWU3_RAT UniProtKB/TrEMBL
  B5DER4 ENTREZGENE, UniProtKB/TrEMBL
  D3ZFE9 ENTREZGENE, UniProtKB/TrEMBL
  F1M9A4 ENTREZGENE, UniProtKB/TrEMBL
1 to 29 of 29 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Mrpl1  mitochondrial ribosomal protein L1  LOC100359687  mitochondrial ribosomal protein L1-like  Data merged from RGD:2325044 737654 PROVISIONAL
2010-05-20 LOC100359687  mitochondrial ribosomal protein L1-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-04-30 Mrpl1  mitochondrial ribosomal protein L1   Mrpl1_predicted  mitochondrial ribosomal protein L1 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Mrpl1_predicted  mitochondrial ribosomal protein L1 (predicted)      Symbol and Name status set to approved 70820 APPROVED