Zfp516 (zinc finger protein 516) - Rat Genome Database

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Pathways
Gene: Zfp516 (zinc finger protein 516) Rattus norvegicus
Analyze
Symbol: Zfp516
Name: zinc finger protein 516
RGD ID: 1306817
Description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific; DNA-binding transcription factor binding activity; and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including adipose tissue development; brown fat cell differentiation; and positive regulation of metabolic process. Predicted to be active in nucleus. Orthologous to human ZNF516 (zinc finger protein 516); INTERACTS WITH atrazine; bisphenol A; Cuprizon.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC291406; RGD1306817; similar to Hypothetical zinc finger protein KIAA0222; Znf516
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81878,561,069 - 78,661,263 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1878,573,562 - 78,674,419 (+)EnsemblGRCr8
mRatBN7.21876,286,453 - 76,386,526 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1876,302,096 - 76,385,269 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1878,445,002 - 78,485,067 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01879,117,046 - 79,157,114 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01876,959,667 - 76,999,739 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01879,768,387 - 79,857,909 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1879,773,608 - 79,854,192 (+)Ensemblrn6Rnor6.0
Rnor_5.01878,822,814 - 78,923,250 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41879,445,606 - 79,486,105 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1874,973,350 - 75,013,499 (+)NCBICelera
RGSC_v3.11879,518,878 - 79,559,768 (+)NCBI
Cytogenetic Map18q12.3NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. Cold-inducible Zfp516 activates UCP1 transcription to promote browning of white fat and development of brown fat. Dempersmier J, etal., Mol Cell. 2015 Jan 22;57(2):235-46. doi: 10.1016/j.molcel.2014.12.005. Epub 2015 Jan 8.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data
Zfp516
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81878,561,069 - 78,661,263 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1878,573,562 - 78,674,419 (+)EnsemblGRCr8
mRatBN7.21876,286,453 - 76,386,526 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1876,302,096 - 76,385,269 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1878,445,002 - 78,485,067 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01879,117,046 - 79,157,114 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01876,959,667 - 76,999,739 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01879,768,387 - 79,857,909 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1879,773,608 - 79,854,192 (+)Ensemblrn6Rnor6.0
Rnor_5.01878,822,814 - 78,923,250 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41879,445,606 - 79,486,105 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1874,973,350 - 75,013,499 (+)NCBICelera
RGSC_v3.11879,518,878 - 79,559,768 (+)NCBI
Cytogenetic Map18q12.3NCBI
ZNF516
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381876,357,682 - 76,496,419 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1876,357,682 - 76,496,132 (-)Ensemblhg38GRCh38
GRCh371874,069,637 - 74,207,198 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361872,200,607 - 72,304,045 (-)NCBIBuild 36Build 36hg18NCBI36
Celera1870,889,374 - 71,024,478 (-)NCBICelera
Cytogenetic Map18q23NCBI
HuRef1870,754,762 - 70,858,708 (-)NCBIHuRef
CHM1_11874,064,875 - 74,202,365 (-)NCBICHM1_1
T2T-CHM13v2.01876,587,498 - 76,725,258 (-)NCBIT2T-CHM13v2.0
Zfp516
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391882,925,324 - 83,023,439 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1882,928,788 - 83,023,439 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381882,909,688 - 83,005,314 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1882,910,663 - 83,005,314 (+)Ensemblmm10GRCm38
MGSCv371883,080,271 - 83,174,706 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361883,090,047 - 83,137,151 (+)NCBIMGSCv36mm8
Celera1883,980,281 - 84,075,429 (+)NCBICelera
Cytogenetic Map18E3NCBI
cM Map1857.39NCBI
Znf516
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540259,752,106 - 59,874,743 (-)Ensembl
ChiLan1.0NW_00495540259,750,682 - 59,874,987 (-)NCBIChiLan1.0ChiLan1.0
ZNF516
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21793,901,734 - 94,043,989 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11879,594,361 - 79,736,622 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01869,748,472 - 69,891,026 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11873,021,762 - 73,150,904 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1873,026,076 - 73,103,609 (-)EnsemblpanPan2panpan1.1
ZNF516
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.113,275,255 - 3,400,761 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl13,274,993 - 3,492,201 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha14,281,756 - 4,406,341 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.013,081,681 - 3,206,321 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl13,115,169 - 3,249,626 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.113,126,590 - 3,251,107 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.013,077,152 - 3,201,792 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.013,247,353 - 3,371,947 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Znf516
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494417,128,032 - 17,232,559 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366162,452,248 - 2,553,693 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049366162,451,952 - 2,553,843 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF516
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1147,984,481 - 148,087,719 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11147,987,660 - 148,100,788 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21163,849,431 - 163,946,769 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF516
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1183,449,624 - 3,588,105 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl183,504,027 - 3,583,816 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366606022,351,429 - 22,489,546 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf516
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248064,153,663 - 4,213,110 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248064,103,811 - 4,223,294 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Znf516
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11549,323,497 - 49,365,196 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Zfp516
685 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:117
Count of miRNA genes:97
Interacting mature miRNAs:102
Transcripts:ENSRNOT00000021768
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182507112683910656Rat
2303584Gluco55Glucose level QTL 552blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)185079521286134022Rat
1331730Scl27Serum cholesterol level QTL 273.826blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)185449080186134022Rat
61384Bp48Blood pressure QTL 4819.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)186289225779484461Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182349405785487725Rat
1298072Cia26Collagen induced arthritis QTL 263.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)186438376279484311Rat
631834Sach3Saccharin preference QTL 33.90.01consumption behavior trait (VT:0002069)calculated saccharin drink intake volume (CMO:0001600)183857591983575919Rat
738008Hcar14Hepatocarcinoma resistance QTL 144.3liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion number (CMO:0001462)185782524385493247Rat
634333Pia19Pristane induced arthritis QTL 193.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)187627210481806852Rat
631518Bw11Body weight QTL 112.8body mass (VT:0001259)body weight (CMO:0000012)183612162681121626Rat
6893683Bw110Body weight QTL 1102.70.002body mass (VT:0001259)body weight (CMO:0000012)184562030686134022Rat
8694366Abfw8Abdominal fat weight QTL 86.380.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)184891573786134022Rat
7794793Mcs34Mammary carcinoma susceptibility QTL 341.54mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)186563556785897775Rat
631274Sprol1Serum protein level QTL 15.3blood total protein amount (VT:0005567)serum total protein level (CMO:0000661)183164450879484311Rat
9589041Epfw12Epididymal fat weight QTL 1217.080.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)184891573786134022Rat
8694432Bw165Body weight QTL 1653.810.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)184891573786134022Rat
1358193Emca2Estrogen-induced mammary cancer QTL 21.6mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)186584644786134022Rat
1598832Glom11Glomerulus QTL 112.9kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)185326667186134022Rat
1600373Mamtr6Mammary tumor resistance QTL 6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)181955353285493247Rat
1331770Bp234Blood pressure QTL 2343.807arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)184562030686134022Rat
2303571Bw92Body weight QTL 923body mass (VT:0001259)body weight (CMO:0000012)185079521286134022Rat
631675Iddm15Insulin dependent diabetes mellitus QTL 15urine glucose amount (VT:0001758)percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)186289225779484461Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181206648285493247Rat
2303120Mamtr8Mammary tumor resistance QTL 80.001mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)183161050585493247Rat
724542Kidm2Kidney mass QTL 22.6kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)186144685386134022Rat
61367Iddm4Insulin dependent diabetes mellitus QTL 42.330.0074blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)184046238385462383Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181206648285493247Rat
1331754Bp230Blood pressure QTL 2304.61609arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181564228086134022Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
20 13 83 200 91 90 59 97 59 6 410 223 22 178 100 123 31 30 30

Sequence


Ensembl Acc Id: ENSRNOT00000021768   ⟹   ENSRNOP00000021768
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1878,573,562 - 78,661,263 (+)Ensembl
mRatBN7.2 Ensembl1876,302,096 - 76,385,269 (+)Ensembl
Rnor_6.0 Ensembl1879,813,759 - 79,853,866 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000088484   ⟹   ENSRNOP00000072097
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1878,573,562 - 78,661,263 (+)Ensembl
mRatBN7.2 Ensembl1876,302,096 - 76,385,269 (+)Ensembl
Rnor_6.0 Ensembl1879,773,608 - 79,854,192 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000163946   ⟹   ENSRNOP00000110282
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1878,573,562 - 78,674,419 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000174142   ⟹   ENSRNOP00000107085
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1878,573,562 - 78,657,396 (+)Ensembl
RefSeq Acc Id: NM_001191695   ⟹   NP_001178624
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81878,573,562 - 78,661,263 (+)NCBI
mRatBN7.21876,298,823 - 76,386,526 (+)NCBI
Rnor_6.01879,813,759 - 79,853,866 (+)NCBI
Rnor_5.01878,822,814 - 78,923,250 (+)NCBI
Celera1874,973,350 - 75,013,499 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001412457   ⟹   NP_001399386
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81878,573,562 - 78,661,263 (+)NCBI
mRatBN7.21876,298,823 - 76,386,526 (+)NCBI
RefSeq Acc Id: XM_008772099   ⟹   XP_008770321
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81878,573,093 - 78,661,263 (+)NCBI
mRatBN7.21876,298,359 - 76,386,526 (+)NCBI
Rnor_6.01879,769,505 - 79,857,909 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008772100   ⟹   XP_008770322
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81878,576,822 - 78,661,263 (+)NCBI
mRatBN7.21876,302,068 - 76,386,526 (+)NCBI
Rnor_6.01879,773,314 - 79,857,908 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017600868   ⟹   XP_017456357
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81878,573,529 - 78,661,263 (+)NCBI
mRatBN7.21876,298,787 - 76,386,526 (+)NCBI
Rnor_6.01879,770,005 - 79,857,909 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017600870   ⟹   XP_017456359
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81878,576,213 - 78,661,263 (+)NCBI
mRatBN7.21876,301,478 - 76,386,526 (+)NCBI
Rnor_6.01879,772,673 - 79,857,908 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017600871   ⟹   XP_017456360
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81878,577,294 - 78,661,263 (+)NCBI
mRatBN7.21876,302,553 - 76,386,526 (+)NCBI
Rnor_6.01879,773,741 - 79,857,909 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039096626   ⟹   XP_038952554
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81878,561,069 - 78,661,263 (+)NCBI
mRatBN7.21876,286,453 - 76,386,526 (+)NCBI
RefSeq Acc Id: XM_039096627   ⟹   XP_038952555
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81878,577,018 - 78,661,263 (+)NCBI
mRatBN7.21876,302,364 - 76,386,526 (+)NCBI
RefSeq Acc Id: XM_063277156   ⟹   XP_063133226
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81878,577,524 - 78,661,263 (+)NCBI
RefSeq Acc Id: NP_001178624   ⟸   NM_001191695
- Peptide Label: isoform 1
- UniProtKB: D4A239 (UniProtKB/TrEMBL),   A6K5K2 (UniProtKB/TrEMBL),   A0A0G2K242 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008770321   ⟸   XM_008772099
- Peptide Label: isoform X1
- UniProtKB: A0A0G2K242 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008770322   ⟸   XM_008772100
- Peptide Label: isoform X2
- UniProtKB: A0A0G2K242 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017456357   ⟸   XM_017600868
- Peptide Label: isoform X1
- UniProtKB: A0A0G2K242 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017456359   ⟸   XM_017600870
- Peptide Label: isoform X1
- UniProtKB: A0A0G2K242 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017456360   ⟸   XM_017600871
- Peptide Label: isoform X1
- UniProtKB: A0A0G2K242 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000021768   ⟸   ENSRNOT00000021768
Ensembl Acc Id: ENSRNOP00000072097   ⟸   ENSRNOT00000088484
RefSeq Acc Id: XP_038952554   ⟸   XM_039096626
- Peptide Label: isoform X1
- UniProtKB: A0A0G2K242 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038952555   ⟸   XM_039096627
- Peptide Label: isoform X1
- UniProtKB: A0A0G2K242 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001399386   ⟸   NM_001412457
- Peptide Label: isoform 2
- UniProtKB: A0A0G2K242 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063133226   ⟸   XM_063277156
- Peptide Label: isoform X1
- UniProtKB: A0A0G2K242 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000107085   ⟸   ENSRNOT00000174142
Ensembl Acc Id: ENSRNOP00000110282   ⟸   ENSRNOT00000163946
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K242-F1-model_v2 AlphaFold A0A0G2K242 1-1171 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306817 AgrOrtholog
BioCyc Gene G2FUF-6770 BioCyc
Ensembl Genes ENSRNOG00000016258 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000021768 ENTREZGENE
  ENSRNOT00000021768.8 UniProtKB/TrEMBL
  ENSRNOT00000088484 ENTREZGENE
  ENSRNOT00000088484.3 UniProtKB/TrEMBL
  ENSRNOT00000163946.1 UniProtKB/TrEMBL
  ENSRNOT00000174142 ENTREZGENE
  ENSRNOT00000174142.1 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro Krueppel_C2H2-ZF UniProtKB/TrEMBL
  Znf_C2H2/integrase_DNA-bd UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
KEGG Report rno:291406 UniProtKB/TrEMBL
NCBI Gene 291406 ENTREZGENE
PANTHER ZINC FINGER PROTEIN UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 516 UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/TrEMBL
PhenoGen Zfp516 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000016258 RatGTEx
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt A0A0G2K242 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LHI7_RAT UniProtKB/TrEMBL
  A0ABK0M137_RAT UniProtKB/TrEMBL
  A6K5K2 ENTREZGENE, UniProtKB/TrEMBL
  D4A239 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-19 Zfp516  zinc finger protein 516  Znf516  zinc finger protein 516  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-09-25 Znf516  zinc finger protein 516  Zfp516  zinc finger protein 516  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-07 Zfp516  zinc finger protein 516  RGD1306817_predicted  similar to Hypothetical zinc finger protein KIAA0222 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-20 RGD1306817_predicted  similar to Hypothetical zinc finger protein KIAA0222 (predicted)  LOC291406_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC291406_predicted  similar to Hypothetical zinc finger protein KIAA0222 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL