Nrap (nebulin-related anchoring protein) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Nrap (nebulin-related anchoring protein) Rattus norvegicus
Analyze
Symbol: Nrap
Name: nebulin-related anchoring protein
RGD ID: 1306731
Description: Predicted to enable actin filament binding activity; muscle alpha-actinin binding activity; and vinculin binding activity. Predicted to be involved in cardiac muscle thin filament assembly. Predicted to be located in fascia adherens; muscle tendon junction; and myofibril. Predicted to be active in Z disc. Orthologous to human NRAP (nebulin related anchoring protein); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 3,4-methylenedioxymethamphetamine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC307982; nebulin-related-anchoring protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81265,355,324 - 265,433,229 (-)NCBIGRCr8
mRatBN7.21255,350,113 - 255,427,704 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1255,350,113 - 255,427,693 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1263,556,625 - 263,637,474 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01270,262,666 - 270,343,513 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01262,910,694 - 262,989,554 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01277,104,519 - 277,181,397 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1277,104,514 - 277,181,414 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01284,485,970 - 284,562,998 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41262,591,454 - 262,672,255 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11262,802,570 - 262,883,294 (-)NCBI
Celera1251,051,595 - 251,127,339 (-)NCBICelera
Cytogenetic Map1q55NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9295142   PMID:10320340   PMID:11732910   PMID:12692149   PMID:15765519   PMID:35352799  


Genomics

Comparative Map Data
Nrap
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81265,355,324 - 265,433,229 (-)NCBIGRCr8
mRatBN7.21255,350,113 - 255,427,704 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1255,350,113 - 255,427,693 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1263,556,625 - 263,637,474 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01270,262,666 - 270,343,513 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01262,910,694 - 262,989,554 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01277,104,519 - 277,181,397 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1277,104,514 - 277,181,414 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01284,485,970 - 284,562,998 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41262,591,454 - 262,672,255 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11262,802,570 - 262,883,294 (-)NCBI
Celera1251,051,595 - 251,127,339 (-)NCBICelera
Cytogenetic Map1q55NCBI
NRAP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810113,588,714 - 113,664,041 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10113,588,714 - 113,664,070 (-)EnsemblGRCh38hg38GRCh38
GRCh3710115,348,473 - 115,423,800 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3610115,338,573 - 115,413,795 (-)NCBINCBI36Build 36hg18NCBI36
Build 3410115,338,573 - 115,413,795NCBI
Celera10109,076,182 - 109,151,224 (-)NCBICelera
Cytogenetic Map10q25.3NCBI
HuRef10108,975,705 - 109,050,768 (-)NCBIHuRef
CHM1_110115,630,550 - 115,705,862 (-)NCBICHM1_1
T2T-CHM13v2.010114,480,337 - 114,555,930 (-)NCBIT2T-CHM13v2.0
Nrap
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391956,308,473 - 56,378,466 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1956,308,467 - 56,378,469 (-)EnsemblGRCm39 Ensembl
GRCm381956,320,037 - 56,390,062 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1956,320,035 - 56,390,037 (-)EnsemblGRCm38mm10GRCm38
MGSCv371956,394,531 - 56,464,525 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361956,373,351 - 56,443,285 (-)NCBIMGSCv36mm8
Celera1958,507,428 - 58,577,358 (-)NCBICelera
Cytogenetic Map19D2NCBI
cM Map1951.8NCBI
Nrap
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543118,604,659 - 18,669,905 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543118,604,508 - 18,669,853 (-)NCBIChiLan1.0ChiLan1.0
NRAP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28125,466,763 - 125,541,517 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110125,472,099 - 125,546,853 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v010110,182,003 - 110,257,033 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.110113,616,060 - 113,691,114 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10113,616,188 - 113,690,926 (-)Ensemblpanpan1.1panPan2
NRAP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12824,522,285 - 24,592,267 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2824,522,362 - 24,592,192 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2824,673,618 - 24,743,579 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02825,054,064 - 25,124,052 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2825,054,070 - 25,124,030 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12824,611,479 - 24,681,399 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02824,619,214 - 24,689,378 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02824,818,690 - 24,888,681 (-)NCBIUU_Cfam_GSD_1.0
Nrap
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721321,485,493 - 21,556,240 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364864,005,055 - 4,075,615 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364864,005,064 - 4,075,660 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NRAP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14123,926,927 - 124,018,440 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114123,928,562 - 124,018,462 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214135,112,165 - 135,130,701 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NRAP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.19106,473,057 - 106,549,679 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604867,687,434 - 67,763,508 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nrap
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473732,896,006 - 32,963,983 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473732,895,903 - 32,963,988 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Nrap
383 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:244
Count of miRNA genes:104
Interacting mature miRNAs:113
Transcripts:ENSRNOT00000038017, ENSRNOT00000038038
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354610Bw34Body weight QTL 344.1body mass (VT:0001259)body weight (CMO:0000012)1151162512256448636Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1151162512256448636Rat
1354661Bw33Body weight QTL 335.2body mass (VT:0001259)body weight (CMO:0000012)1151162512256448636Rat
1549837Hcar15Hepatocarcinoma resistance QTL 150.05liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1153136852260522016Rat
1354580Scort1Serum corticosterone level QTL 13.4blood corticosterone amount (VT:0005345)blood corticosterone level (CMO:0001172)1156677124256448636Rat
738032Hcas5Hepatocarcinoma susceptibility QTL 53.12liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1176426412257976495Rat
1354624Cm35Cardiac mass QTL355.7heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1177227632256448636Rat
1354652Kidm20Kidney mass QTL 204.3kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1177227632256448636Rat
1578763Kidm29Kidney mass QTL 293.30.0001kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1179567751260522016Rat
1600388Niddm67Non-insulin dependent diabetes mellitus QTL 675.840.000004blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1195804352257091168Rat
1600395Niddm69Non-insulin dependent diabetes mellitus QTL 694.140.0002blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1195804352257091168Rat
1600396Niddm68Non-insulin dependent diabetes mellitus QTL 684.970.0003blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1195804352257091168Rat
634313Niddm43Non-insulin dependent diabetes mellitus QTL 43blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1199050459259647894Rat
1358890Bp259Blood pressure QTL 2593.06arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1210702053260522016Rat
734768Niddm59Non-insulin dependent diabetes mellitus QTL 59body mass (VT:0001259)body weight (CMO:0000012)1213843987258843987Rat
70211Niddm24Non-insulin dependent diabetes mellitus QTL 243.79blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1214647894259647894Rat
1549910Bw54Body weight QTL 540.05body mass (VT:0001259)body weight (CMO:0000012)1214647894259647894Rat
61327Eae7Experimental allergic encephalomyelitis QTL 75.6body mass (VT:0001259)change in body weight (CMO:0002045)1216255568260522016Rat
2302040Pia35Pristane induced arthritis QTL 353.80.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)1216255568260522016Rat
1598821Rf55Renal function QTL 556.3renal blood flow trait (VT:2000006)ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)1218748008257976495Rat
724533Rf51Renal function QTL 515.30.0002kidney plasma flow trait (VT:0005524)renal plasma flow (CMO:0001914)1218753816256448513Rat
731175Uae20Urinary albumin excretion QTL 203.50.0018urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1221264111259647894Rat
10053715Scort24Serum corticosterone level QTL 242.130.0088blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1221414816260522016Rat
724552Glom2Glomerulus QTL 23.30.0001kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)1222363780260522016Rat
1600392Bw123Body weight QTL 1230.001body mass (VT:0001259)body weight (CMO:0000012)1223201027260522016Rat
734767Niddm57Non-insulin dependent diabetes mellitus QTL 57body mass (VT:0001259)body weight (CMO:0000012)1224054293260122809Rat
631843Bw116Body weight QTL 1164.10.016abdominal adipose amount (VT:1000220)abdominal fat pad weight (CMO:0000088)1224054293260122809Rat
734769Niddm58Non-insulin dependent diabetes mellitus QTL 58body mass (VT:0001259)body weight (CMO:0000012)1224569538260122809Rat
631215Stl8Serum triglyceride level QTL 89.270.0001blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1225126575260522016Rat
1300108Rf8Renal function QTL 83.75renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)1228581588259647894Rat
1581544Rf52Renal function QTL 520.05urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)1232156370259647894Rat
631669Iddm9Insulin dependent diabetes mellitus QTL 92.80.039blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1233190394258625266Rat
631536Lnnr2Liver neoplastic nodule remodeling QTL 22.90.0005liver integrity trait (VT:0010547)liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)1233948574260522016Rat
631690Scl5Serum cholesterol level QTL 52.1blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1236125214260522016Rat
631836Stl31Serum triglyceride level QTL 314.640.00000487blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)1237147813260522016Rat
631837Niddm35Non-insulin dependent diabetes mellitus QTL 350.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1238699859259647894Rat
1598839Rf56Renal function QTL 56renal blood flow trait (VT:2000006)ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)1245907761257976495Rat

Markers in Region
WIAF-1676  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21255,355,475 - 255,355,612 (+)MAPPERmRatBN7.2
Rnor_6.01277,109,882 - 277,110,018NCBIRnor6.0
Rnor_5.01284,491,333 - 284,491,469UniSTSRnor5.0
RGSC_v3.41262,596,817 - 262,596,953UniSTSRGSC3.4
Celera1251,056,958 - 251,057,094UniSTS
Cytogenetic Map1q55UniSTS
RH132458  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21255,350,245 - 255,351,026 (+)MAPPERmRatBN7.2
Rnor_6.01277,104,652 - 277,105,432NCBIRnor6.0
Rnor_5.01284,486,103 - 284,486,883UniSTSRnor5.0
RGSC_v3.41262,591,587 - 262,592,367UniSTSRGSC3.4
Celera1251,051,728 - 251,052,508UniSTS
RH 3.4 Map11680.3UniSTS
Cytogenetic Map1q55UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 33 8 11 6 8
Low 10 12 8 6 8 10 20 4
Below cutoff 1 36 24 11 24 62 20 18 1

Sequence


RefSeq Acc Id: ENSRNOT00000038017   ⟹   ENSRNOP00000029499
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1255,350,113 - 255,427,693 (-)Ensembl
Rnor_6.0 Ensembl1277,104,519 - 277,181,345 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000038038   ⟹   ENSRNOP00000030387
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1255,350,113 - 255,427,693 (-)Ensembl
Rnor_6.0 Ensembl1277,104,514 - 277,181,414 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000101073   ⟹   ENSRNOP00000090989
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1255,350,113 - 255,427,693 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000115960   ⟹   ENSRNOP00000086892
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1255,350,113 - 255,427,693 (-)Ensembl
RefSeq Acc Id: NM_001107443   ⟹   NP_001100913
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81265,355,327 - 265,432,903 (-)NCBI
mRatBN7.21255,350,113 - 255,427,693 (-)NCBI
Rnor_6.01277,104,519 - 277,181,345 (-)NCBI
Rnor_5.01284,485,970 - 284,562,998 (-)NCBI
RGSC_v3.41262,591,454 - 262,672,255 (-)RGD
Celera1251,051,595 - 251,127,339 (-)RGD
Sequence:
RefSeq Acc Id: NM_001113743   ⟹   NP_001107215
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81265,355,327 - 265,432,903 (-)NCBI
mRatBN7.21255,350,113 - 255,427,693 (-)NCBI
Rnor_6.01277,104,519 - 277,181,345 (-)NCBI
Rnor_5.01284,485,970 - 284,562,998 (-)NCBI
RGSC_v3.41262,591,454 - 262,672,255 (-)RGD
Celera1251,051,595 - 251,127,339 (-)RGD
Sequence:
RefSeq Acc Id: XM_006231644   ⟹   XP_006231706
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81265,355,324 - 265,433,229 (-)NCBI
mRatBN7.21255,350,115 - 255,427,704 (-)NCBI
Rnor_6.01277,104,521 - 277,181,397 (-)NCBI
Rnor_5.01284,485,970 - 284,562,998 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008760535   ⟹   XP_008758757
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81265,355,324 - 265,432,920 (-)NCBI
mRatBN7.21255,350,115 - 255,427,703 (-)NCBI
Rnor_6.01277,104,521 - 277,181,397 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039110113   ⟹   XP_038966041
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81265,355,324 - 265,432,911 (-)NCBI
mRatBN7.21255,350,115 - 255,427,703 (-)NCBI
RefSeq Acc Id: XM_039110118   ⟹   XP_038966046
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81265,355,324 - 265,433,229 (-)NCBI
mRatBN7.21255,350,115 - 255,427,704 (-)NCBI
RefSeq Acc Id: NP_001100913   ⟸   NM_001107443
- Peptide Label: isoform C
- UniProtKB: A0A8I6A7A7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001107215   ⟸   NM_001113743
- Peptide Label: isoform S
- UniProtKB: A0A8I6A7A7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006231706   ⟸   XM_006231644
- Peptide Label: isoform X1
- UniProtKB: D4A4K6 (UniProtKB/TrEMBL),   A0A8I6A7A7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008758757   ⟸   XM_008760535
- Peptide Label: isoform X2
- UniProtKB: D3Z802 (UniProtKB/TrEMBL),   A0A8I6A7A7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000029499   ⟸   ENSRNOT00000038017
RefSeq Acc Id: ENSRNOP00000030387   ⟸   ENSRNOT00000038038
RefSeq Acc Id: XP_038966046   ⟸   XM_039110118
- Peptide Label: isoform X4
- UniProtKB: A0A8I6A7A7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038966041   ⟸   XM_039110113
- Peptide Label: isoform X3
- UniProtKB: A0A8I6A7A7 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000090989   ⟸   ENSRNOT00000101073
RefSeq Acc Id: ENSRNOP00000086892   ⟸   ENSRNOT00000115960
Protein Domains
LIM zinc-binding

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4A4K6-F1-model_v2 AlphaFold D4A4K6 1-1727 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13691001
Promoter ID:EPDNEW_R1526
Type:single initiation site
Name:Nrap_1
Description:nebulin-related anchoring protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01277,181,345 - 277,181,405EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306731 AgrOrtholog
BioCyc Gene G2FUF-55326 BioCyc
Ensembl Genes ENSRNOG00000016714 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000038017.4 UniProtKB/TrEMBL
  ENSRNOT00000038038.7 UniProtKB/TrEMBL
  ENSRNOT00000101073 ENTREZGENE
  ENSRNOT00000101073.1 UniProtKB/TrEMBL
  ENSRNOT00000115960 ENTREZGENE
  ENSRNOT00000115960.1 UniProtKB/TrEMBL
Gene3D-CATH Cysteine Rich Protein UniProtKB/TrEMBL
InterPro Nebulin UniProtKB/TrEMBL
  Nebulin_35r-motif UniProtKB/TrEMBL
  Znf_LIM UniProtKB/TrEMBL
NCBI Gene 307982 ENTREZGENE
PANTHER NEBULIN UniProtKB/TrEMBL
  NEBULIN-RELATED-ANCHORING PROTEIN UniProtKB/TrEMBL
Pfam LIM UniProtKB/TrEMBL
  Nebulin UniProtKB/TrEMBL
PhenoGen Nrap PhenoGen
PRINTS NEBULIN UniProtKB/TrEMBL
PROSITE LIM_DOMAIN_1 UniProtKB/TrEMBL
  LIM_DOMAIN_2 UniProtKB/TrEMBL
  NEBULIN UniProtKB/TrEMBL
RatGTEx ENSRNOG00000016714 RatGTEx
SMART LIM UniProtKB/TrEMBL
  NEBU UniProtKB/TrEMBL
Superfamily-SCOP Glucocorticoid receptor-like (DNA-binding domain) UniProtKB/TrEMBL
UniProt A0A8I6A7A7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AB88_RAT UniProtKB/TrEMBL
  D3Z802 ENTREZGENE, UniProtKB/TrEMBL
  D4A4K6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Nrap  nebulin-related anchoring protein   Nrap_predicted  nebulin-related anchoring protein (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Nrap_predicted  nebulin-related anchoring protein (predicted)      Symbol and Name status set to approved 70820 APPROVED