Mtmr7 (myotubularin related protein 7) - Rat Genome Database

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Gene: Mtmr7 (myotubularin related protein 7) Rattus norvegicus
Analyze
Symbol: Mtmr7
Name: myotubularin related protein 7
RGD ID: 1306608
Description: Predicted to enable inositol bisphosphate phosphatase activity; phosphatidylinositol-3,5-bisphosphate phosphatase activity; and phosphatidylinositol-3-phosphate phosphatase activity. Predicted to be involved in phosphatidylinositol dephosphorylation. Predicted to be located in cytosol and membrane. Predicted to be active in cytoplasm. Orthologous to human MTMR7 (myotubularin related protein 7); PARTICIPATES IN fructose and mannose metabolic pathway; INTERACTS WITH (+)-schisandrin B; 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC306490; myotubularin-related protein 7
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81658,344,755 - 58,435,682 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1658,344,767 - 58,436,615 (+)EnsemblGRCr8
mRatBN7.21651,641,267 - 51,732,212 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1651,641,190 - 51,732,182 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1656,971,662 - 57,062,850 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01660,360,345 - 60,451,266 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01655,605,616 - 55,696,804 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01654,765,214 - 54,856,255 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1654,765,325 - 54,856,225 (+)Ensemblrn6Rnor6.0
Rnor_5.01654,469,045 - 54,560,088 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41654,982,204 - 55,073,152 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1649,533,566 - 49,624,432 (+)NCBICelera
RGSC_v3.11654,982,286 - 55,073,225 (+)NCBI
Cytogenetic Map16q12.1NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
1-naphthyl isothiocyanate  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
2,6-dinitrotoluene  (EXP)
3,3',4,4',5-pentachlorobiphenyl  (EXP)
4,4'-diaminodiphenylmethane  (EXP,ISO)
4,4'-sulfonyldiphenol  (ISO)
acetamide  (EXP)
acrylamide  (EXP)
aflatoxin B1  (EXP,ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
cadmium dichloride  (EXP)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (ISO)
choline  (ISO)
cobalt dichloride  (EXP)
crocidolite asbestos  (ISO)
cycloheximide  (ISO)
cyclosporin A  (ISO)
Dibutyl phosphate  (ISO)
diquat  (ISO)
ethanol  (EXP)
flutamide  (EXP)
folic acid  (ISO)
fulvestrant  (ISO)
furan  (EXP)
genistein  (ISO)
gentamycin  (EXP)
indole-3-methanol  (EXP)
L-methionine  (ISO)
methotrexate  (ISO)
methoxychlor  (EXP)
mono(2-ethylhexyl) phthalate  (ISO)
N,N-diethyl-m-toluamide  (EXP)
N-nitrosodimethylamine  (EXP)
nickel dichloride  (EXP)
orphenadrine  (EXP)
oxycodone  (EXP)
ozone  (EXP,ISO)
paracetamol  (EXP)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP,ISO)
permethrin  (EXP)
phenobarbital  (EXP)
pirinixic acid  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
resveratrol  (EXP)
sodium arsenite  (ISO)
sodium dichromate  (EXP)
streptozocin  (EXP)
tetrachloromethane  (EXP,ISO)
thioacetamide  (EXP)
thiram  (ISO)
titanium dioxide  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
valdecoxib  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA,IEA,ISO)
cytosol  (IEA,ISO)
endomembrane system  (IEA)
membrane  (IEA,ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. GOA pipeline RGD automated data pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12890864   PMID:16787938  


Genomics

Comparative Map Data
Mtmr7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81658,344,755 - 58,435,682 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1658,344,767 - 58,436,615 (+)EnsemblGRCr8
mRatBN7.21651,641,267 - 51,732,212 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1651,641,190 - 51,732,182 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1656,971,662 - 57,062,850 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01660,360,345 - 60,451,266 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01655,605,616 - 55,696,804 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01654,765,214 - 54,856,255 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1654,765,325 - 54,856,225 (+)Ensemblrn6Rnor6.0
Rnor_5.01654,469,045 - 54,560,088 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41654,982,204 - 55,073,152 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1649,533,566 - 49,624,432 (+)NCBICelera
RGSC_v3.11654,982,286 - 55,073,225 (+)NCBI
Cytogenetic Map16q12.1NCBI
MTMR7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38817,296,794 - 17,413,351 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl817,296,794 - 17,413,528 (-)Ensemblhg38GRCh38
GRCh37817,154,303 - 17,270,860 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36817,199,910 - 17,315,207 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34817,199,912 - 17,315,207NCBI
Celera816,120,349 - 16,236,789 (-)NCBICelera
Cytogenetic Map8p22NCBI
HuRef815,699,174 - 15,815,604 (-)NCBIHuRef
CHM1_1817,355,759 - 17,472,502 (-)NCBICHM1_1
T2T-CHM13v2.0817,564,397 - 17,680,622 (-)NCBIT2T-CHM13v2.0
Mtmr7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39841,003,184 - 41,088,210 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl841,004,136 - 41,087,840 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38840,548,199 - 40,634,935 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl840,551,095 - 40,634,797 (-)Ensemblmm10GRCm38
MGSCv37841,635,513 - 41,720,146 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36842,049,912 - 42,133,603 (-)NCBIMGSCv36mm8
Celera843,199,612 - 43,280,509 (-)NCBICelera
Cytogenetic Map8A4NCBI
cM Map823.89NCBI
Mtmr7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555522,298,597 - 2,411,733 (+)Ensembl
ChiLan1.0NW_0049555522,298,597 - 2,412,579 (+)NCBIChiLan1.0ChiLan1.0
MTMR7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2735,756,455 - 35,872,863 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1811,490,982 - 11,607,497 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0816,509,712 - 16,626,018 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1813,454,694 - 13,571,130 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl813,454,694 - 13,571,706 (-)EnsemblpanPan2panpan1.1
MTMR7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11640,638,636 - 40,810,103 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1640,641,822 - 40,809,562 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1641,138,303 - 41,312,247 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01642,694,555 - 42,867,330 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1642,694,559 - 42,859,630 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11640,788,134 - 40,960,621 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01641,331,141 - 41,504,241 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01641,524,700 - 41,698,742 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Mtmr7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494338,707,838 - 38,796,292 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365736,346,792 - 6,434,472 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365736,346,106 - 6,434,697 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MTMR7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl175,006,623 - 5,122,201 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1175,007,560 - 5,122,367 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2175,450,626 - 5,606,130 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MTMR7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1815,386,186 - 15,498,997 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl815,387,958 - 15,498,905 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605226,779,318 - 26,895,406 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mtmr7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476921,889,747 - 21,984,550 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462476921,889,723 - 21,987,888 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Mtmr7
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11346,830,041 - 46,925,674 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Mtmr7
606 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:581
Count of miRNA genes:256
Interacting mature miRNAs:327
Transcripts:ENSRNOT00000065327
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2300163Bmd64Bone mineral density QTL 645.30.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)164445512389455123Rat
70215Niddm29Non-insulin dependent diabetes mellitus QTL 293.54blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)163692878281928782Rat
1578768Stresp22Stress response QTL 222.8thymus mass (VT:0004954)thymus wet weight (CMO:0000855)164199206486992064Rat
737826Alc11Alcohol consumption QTL 113.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16423421266955197Rat
2302057Pia29Pristane induced arthritis QTL 293.60.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)162846870173468701Rat
7205510Activ5Activity QTL 53.780.00028locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)164909919691442908Rat
1357403Slep4Serum leptin concentration QTL 43.91blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)163236104377361043Rat
8694453Bw172Body weight QTL 1728.330.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)163105803976058039Rat
1298529Arunc1Aerobic running capacity QTL 14exercise endurance trait (VT:0002332)longest distance run on treadmill (CMO:0001406)163439829479398294Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683908666195506Rat
2312660Bw95Body weight QTL 950.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)1683908666195506Rat
6903294Stl30Serum triglyceride level QTL 302.60.0013blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)163188527176885271Rat
2293690Bss45Bone structure and strength QTL 455.130.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)164445512389455123Rat
2312666Insul16Insulin level QTL 160.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1683908666195506Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161773081872536785Rat
2301406Kidm39Kidney mass QTL 390.002kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)161590580260905802Rat
2312669Stl23Serum triglyceride level QTL 230.01blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1683908666195506Rat

Markers in Region
RH130083  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21651,731,871 - 51,732,114 (+)MAPPERmRatBN7.2
Rnor_6.01654,855,915 - 54,856,157NCBIRnor6.0
Rnor_5.01654,559,752 - 54,559,994UniSTSRnor5.0
RGSC_v3.41655,072,842 - 55,073,084UniSTSRGSC3.4
Celera1649,624,122 - 49,624,364UniSTS
RH 3.4 Map16521.2UniSTS
Cytogenetic Map16q12.1UniSTS
BE119707  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21651,674,994 - 51,675,162 (+)MAPPERmRatBN7.2
Rnor_6.01654,799,038 - 54,799,205NCBIRnor6.0
Rnor_5.01654,502,769 - 54,502,936UniSTSRnor5.0
RGSC_v3.41655,015,917 - 55,016,084UniSTSRGSC3.4
Celera1649,567,267 - 49,567,434UniSTS
RH 3.4 Map16524.8UniSTS
Cytogenetic Map16q12.1UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 65 164 91 90 59 92 59 6 354 190 11 143 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000065327   ⟹   ENSRNOP00000059684
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1658,363,409 - 58,436,615 (+)Ensembl
mRatBN7.2 Ensembl1651,641,283 - 51,732,182 (+)Ensembl
Rnor_6.0 Ensembl1654,765,325 - 54,856,225 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000086899   ⟹   ENSRNOP00000071921
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1658,344,809 - 58,435,675 (+)Ensembl
mRatBN7.2 Ensembl1651,641,296 - 51,732,182 (+)Ensembl
Rnor_6.0 Ensembl1654,765,347 - 54,855,968 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000098681   ⟹   ENSRNOP00000088279
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1658,345,119 - 58,435,675 (+)Ensembl
mRatBN7.2 Ensembl1651,668,023 - 51,732,182 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000105685   ⟹   ENSRNOP00000091098
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1658,344,767 - 58,436,615 (+)Ensembl
mRatBN7.2 Ensembl1651,641,190 - 51,732,182 (+)Ensembl
RefSeq Acc Id: NM_001107312   ⟹   NP_001100782
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81658,344,755 - 58,435,682 (+)NCBI
mRatBN7.21651,641,285 - 51,732,212 (+)NCBI
Rnor_6.01654,765,325 - 54,856,225 (+)NCBI
Rnor_5.01654,469,045 - 54,560,088 (+)NCBI
RGSC_v3.41654,982,204 - 55,073,152 (+)RGD
Celera1649,533,566 - 49,624,432 (+)RGD
Sequence:
RefSeq Acc Id: XM_039094531   ⟹   XP_038950459
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81658,385,403 - 58,435,682 (+)NCBI
mRatBN7.21651,681,956 - 51,732,212 (+)NCBI
RefSeq Acc Id: XM_039094532   ⟹   XP_038950460
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81658,385,920 - 58,435,682 (+)NCBI
mRatBN7.21651,682,447 - 51,732,212 (+)NCBI
RefSeq Acc Id: XM_039094533   ⟹   XP_038950461
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81658,399,940 - 58,435,682 (+)NCBI
mRatBN7.21651,697,787 - 51,732,212 (+)NCBI
RefSeq Acc Id: XM_063275429   ⟹   XP_063131499
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81658,345,108 - 58,435,682 (+)NCBI
RefSeq Acc Id: XM_063275430   ⟹   XP_063131500
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81658,357,347 - 58,435,682 (+)NCBI
RefSeq Acc Id: NP_001100782   ⟸   NM_001107312
- UniProtKB: A0A8I6AEZ2 (UniProtKB/TrEMBL),   A0A8I6GGY0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000059684   ⟸   ENSRNOT00000065327
Ensembl Acc Id: ENSRNOP00000071921   ⟸   ENSRNOT00000086899
RefSeq Acc Id: XP_038950459   ⟸   XM_039094531
- Peptide Label: isoform X3
- UniProtKB: A6JPV0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038950460   ⟸   XM_039094532
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038950461   ⟸   XM_039094533
- Peptide Label: isoform X5
Ensembl Acc Id: ENSRNOP00000088279   ⟸   ENSRNOT00000098681
Ensembl Acc Id: ENSRNOP00000091098   ⟸   ENSRNOT00000105685
RefSeq Acc Id: XP_063131499   ⟸   XM_063275429
- Peptide Label: isoform X1
- UniProtKB: A0A0G2K1P1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063131500   ⟸   XM_063275430
- Peptide Label: isoform X2
- UniProtKB: A6JPV0 (UniProtKB/TrEMBL)
Protein Domains
Myotubularin phosphatase   Tyrosine specific protein phosphatases

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K1P1-F1-model_v2 AlphaFold A0A0G2K1P1 1-660 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306608 AgrOrtholog
BioCyc Gene G2FUF-11245 BioCyc
Ensembl Genes ENSRNOG00000011420 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000065327.4 UniProtKB/TrEMBL
  ENSRNOT00000086899 ENTREZGENE
  ENSRNOT00000086899.3 UniProtKB/TrEMBL
  ENSRNOT00000098681.2 UniProtKB/TrEMBL
  ENSRNOT00000105685 ENTREZGENE
  ENSRNOT00000105685.2 UniProtKB/TrEMBL
Gene3D-CATH 2.30.29.30 UniProtKB/TrEMBL
  3.90.190.10 UniProtKB/TrEMBL
InterPro MTMR7 UniProtKB/TrEMBL
  MTMR7_PH-GRAM UniProtKB/TrEMBL
  Myotub-related UniProtKB/TrEMBL
  Myotubularin_fam UniProtKB/TrEMBL
  PH/PTB_dom UniProtKB/TrEMBL
  Prot-tyrosine_phosphatase-like UniProtKB/TrEMBL
  Tyr/Dual-specificity_Pase UniProtKB/TrEMBL
  Tyr_Pase_AS UniProtKB/TrEMBL
  Tyr_Pase_cat UniProtKB/TrEMBL
KEGG Report rno:306490 UniProtKB/TrEMBL
NCBI Gene 306490 ENTREZGENE
PANTHER PTHR10807 UniProtKB/TrEMBL
  PTHR10807:SF35 UniProtKB/TrEMBL
Pfam Myotub-related UniProtKB/TrEMBL
  PH-GRAM_MTMR6-like UniProtKB/TrEMBL
PhenoGen Mtmr7 PhenoGen
PROSITE PPASE_MYOTUBULARIN UniProtKB/TrEMBL
  TYR_PHOSPHATASE_1 UniProtKB/TrEMBL
  TYR_PHOSPHATASE_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000011420 RatGTEx
SMART PTPc_motif UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
  SSF52799 UniProtKB/TrEMBL
UniProt A0A0G2K1P1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AEZ2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GGY0 ENTREZGENE, UniProtKB/TrEMBL
  A6JPV0 ENTREZGENE, UniProtKB/TrEMBL
  A6JPV1_RAT UniProtKB/TrEMBL
  D3ZTB0_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Mtmr7  myotubularin related protein 7   Mtmr7_predicted  myotubularin related protein 7 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Mtmr7_predicted  myotubularin related protein 7 (predicted)      Symbol and Name status set to approved 70820 APPROVED