Tmtc3 (transmembrane O-mannosyltransferase targeting cadherins 3) - Rat Genome Database

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Gene: Tmtc3 (transmembrane O-mannosyltransferase targeting cadherins 3) Rattus norvegicus
Analyze
Symbol: Tmtc3
Name: transmembrane O-mannosyltransferase targeting cadherins 3
RGD ID: 1306351
Description: Predicted to enable dolichyl-phosphate-mannose-protein mannosyltransferase activity. Predicted to be involved in positive regulation of proteasomal protein catabolic process; protein O-linked mannosylation; and response to endoplasmic reticulum stress. Predicted to act upstream of or within several processes, including lung development; muscle cell development; and post-embryonic development. Predicted to be located in membrane. Predicted to be active in endoplasmic reticulum. Human ortholog(s) of this gene implicated in lissencephaly 8. Orthologous to human TMTC3 (transmembrane O-mannosyltransferase targeting cadherins 3); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC314785; RGD1306351; transmembrane and tetratricopeptide repeat containing 3; transmembrane and TPR repeat-containing protein 3
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8737,151,456 - 37,196,550 (-)NCBIGRCr8
mRatBN7.2735,264,886 - 35,310,010 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl735,264,892 - 35,310,385 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx737,252,021 - 37,297,150 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0739,425,389 - 39,470,512 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0739,158,591 - 39,203,716 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0740,171,957 - 40,217,056 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl740,171,963 - 40,217,056 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0740,209,728 - 40,223,554 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0740,229,438 - 40,256,099 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4738,093,113 - 38,138,332 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1738,116,149 - 38,158,600 (-)NCBI
Celera732,257,562 - 32,302,646 (-)NCBICelera
Cytogenetic Map7q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:21603654   PMID:21956870   PMID:28973932  


Genomics

Comparative Map Data
Tmtc3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8737,151,456 - 37,196,550 (-)NCBIGRCr8
mRatBN7.2735,264,886 - 35,310,010 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl735,264,892 - 35,310,385 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx737,252,021 - 37,297,150 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0739,425,389 - 39,470,512 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0739,158,591 - 39,203,716 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0740,171,957 - 40,217,056 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl740,171,963 - 40,217,056 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0740,209,728 - 40,223,554 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0740,229,438 - 40,256,099 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4738,093,113 - 38,138,332 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1738,116,149 - 38,158,600 (-)NCBI
Celera732,257,562 - 32,302,646 (-)NCBICelera
Cytogenetic Map7q21NCBI
TMTC3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381288,142,307 - 88,199,887 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1288,142,296 - 88,199,887 (+)EnsemblGRCh38hg38GRCh38
GRCh371288,536,084 - 88,593,664 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361287,060,232 - 87,115,591 (+)NCBINCBI36Build 36hg18NCBI36
Celera1288,204,154 - 88,261,758 (+)NCBICelera
Cytogenetic Map12q21.32NCBI
HuRef1285,603,025 - 85,660,601 (+)NCBIHuRef
CHM1_11288,501,152 - 88,558,754 (+)NCBICHM1_1
T2T-CHM13v2.01288,124,249 - 88,181,842 (+)NCBIT2T-CHM13v2.0
Tmtc3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910100,279,764 - 100,323,230 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10100,279,764 - 100,323,212 (-)EnsemblGRCm39 Ensembl
GRCm3810100,443,902 - 100,487,365 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10100,443,902 - 100,487,350 (-)EnsemblGRCm38mm10GRCm38
MGSCv371099,906,536 - 99,949,981 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361099,877,872 - 99,917,035 (-)NCBIMGSCv36mm8
Celera10102,375,970 - 102,419,249 (-)NCBICelera
Cytogenetic Map10D1NCBI
cM Map1051.47NCBI
Tmtc3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540525,606,414 - 25,646,050 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540525,607,134 - 25,646,050 (+)NCBIChiLan1.0ChiLan1.0
TMTC3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21096,182,072 - 96,239,743 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11296,178,475 - 96,235,286 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01285,683,455 - 85,741,118 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11288,989,033 - 89,046,636 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1288,989,033 - 89,046,630 (+)Ensemblpanpan1.1panPan2
TMTC3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11529,280,423 - 29,350,449 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1529,298,078 - 29,350,553 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1529,726,584 - 29,801,388 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01529,913,031 - 29,987,917 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1529,918,828 - 29,987,924 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11529,231,647 - 29,306,471 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01529,290,989 - 29,365,822 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01529,574,378 - 29,649,190 (+)NCBIUU_Cfam_GSD_1.0
Tmtc3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494530,883,098 - 30,929,936 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365075,305,460 - 5,352,337 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365075,305,489 - 5,349,828 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMTC3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl594,324,091 - 94,384,154 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1594,328,452 - 94,384,266 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2599,022,882 - 99,070,980 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TMTC3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11183,515,494 - 83,571,644 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1183,521,169 - 83,571,695 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037161,697,315 - 161,755,386 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmtc3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248377,138,419 - 7,190,194 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248377,139,006 - 7,205,077 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Tmtc3
233 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:616
Count of miRNA genes:267
Interacting mature miRNAs:357
Transcripts:ENSRNOT00000029045
Prediction methods:Microtar, Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2317047Wbc4White blood cell count QTL 40.01leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)7135342956Rat
61410Bw19Body weight QTL 196.20.001body mass (VT:0001259)body weight (CMO:0000012)7144782185Rat
631503Bp102Blood pressure QTL 1021.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7144822433Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)7924703115097879Rat
10755438Coatc9Coat color QTL 90coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7352928048529280Rat
9590102Sffal5Serum free fatty acids level QTL 58.620.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)7532901950329019Rat
10755440Coatc10Coat color QTL 100coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7749649952496499Rat
10059592Kidm45Kidney mass QTL 453.950.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)7757398552573985Rat
2298547Neuinf5Neuroinflammation QTL 53.7nervous system integrity trait (VT:0010566)spinal cord Cd74 protein level (CMO:0002131)7946224658265113Rat
1643004Pain2Pain QTL 21mechanical nociception trait (VT:0002734)self mutilation severity score (CMO:0002145)7946224698011544Rat
1578652Bmd15Bone mineral density QTL 155.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)7986646760460686Rat
738033Anxrr6Anxiety related response QTL 64.1exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)71557388960573889Rat
1582260Bw72Body weight QTL 723.20.0043body mass (VT:0001259)body weight (CMO:0000012)71579556538073970Rat
1582261Bw69Body weight QTL 693.20.0048body mass (VT:0001259)body weight (CMO:0000012)71579556538073970Rat
1582262Bw75Body weight QTL 7530.0038body mass (VT:0001259)body weight (CMO:0000012)71579556538073970Rat
2317059Aia15Adjuvant induced arthritis QTL 152.46joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)71700459862004598Rat
10755451Coatc11Coat color QTL 110coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)71794435762944357Rat
61369Mcs2Mammary carcinoma susceptibility QTL 23.38mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)71903280735526300Rat
1354637Scl30Serum cholesterol level QTL 303.7blood cholesterol amount (VT:0000180)blood total cholesterol level (CMO:0000051)71965431749753746Rat
1354644Spl4Serum phospholipid level QTL 44.9blood phospholipid amount (VT:0006084)blood phospholipid level (CMO:0001169)71965431749753746Rat
1354639Spl5Serum phospholipid level QTL 53.9blood LDL phospholipid amount (VT:0010505)blood low density lipoprotein phospholipid level (CMO:0001568)71965431752888450Rat
1300132Bp182Blood pressure QTL 1823.49arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)71965431784928080Rat
7411569Bw137Body weight QTL 1370.001body mass (VT:0001259)body weight gain (CMO:0000420)72192119566921195Rat
1641885Alcrsp9Alcohol response QTL 9alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)72409960669099606Rat
1549840Bss5Bone structure and strength QTL 59.8femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)72475184169751841Rat
70190Mcs6Mammary carcinoma susceptibility QTL 62.29mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)72673740163902784Rat
1300138Hrtrt9Heart rate QTL 94.72heart pumping trait (VT:2000009)heart rate (CMO:0000002)72940968353612950Rat
10402855Bp379Blood pressure QTL 3790.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)72940968374409683Rat
1300127Srn1Serum renin concentration QTL 13.87blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)72940968384928080Rat
10755453Coatc12Coat color QTL 120coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)73111283276112832Rat
7411605Foco14Food consumption QTL 1424.10.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)73429328279293282Rat
631534Lnnr1Liver neoplastic nodule remodeling QTL 13.850.001liver integrity trait (VT:0010547)liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)73429328279293282Rat

Markers in Region
BE112002  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2735,265,770 - 35,265,926 (+)MAPPERmRatBN7.2
Rnor_6.0740,172,842 - 40,172,997NCBIRnor6.0
Rnor_5.0740,210,607 - 40,210,762UniSTSRnor5.0
RGSC_v3.4738,093,992 - 38,094,147UniSTSRGSC3.4
Celera732,258,441 - 32,258,596UniSTS
RH 3.4 Map7296.3UniSTS
Cytogenetic Map7q13UniSTS
RH142284  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2735,265,318 - 35,265,478 (+)MAPPERmRatBN7.2
Rnor_6.0740,172,390 - 40,172,549NCBIRnor6.0
Rnor_5.0740,210,155 - 40,210,314UniSTSRnor5.0
RGSC_v3.4738,093,540 - 38,093,699UniSTSRGSC3.4
Celera732,257,989 - 32,258,148UniSTS
RH 3.4 Map7295.8UniSTS
Cytogenetic Map7q13UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 26 20 6 15 6 2 2 55 28 35 11 2
Low 3 17 37 35 4 35 6 8 19 7 6 6
Below cutoff 1

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000029045   ⟹   ENSRNOP00000037617
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl735,264,892 - 35,310,385 (-)Ensembl
Rnor_6.0 Ensembl740,171,963 - 40,217,056 (-)Ensembl
RefSeq Acc Id: NM_001135858   ⟹   NP_001129330
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8737,151,456 - 37,196,540 (-)NCBI
mRatBN7.2735,264,886 - 35,309,971 (-)NCBI
Rnor_6.0740,171,963 - 40,217,056 (-)NCBI
Rnor_5.0740,209,728 - 40,223,554 (-)NCBI
Rnor_5.0740,229,438 - 40,256,099 (-)NCBI
RGSC_v3.4738,093,113 - 38,138,332 (-)RGD
Celera732,257,562 - 32,302,646 (-)RGD
Sequence:
RefSeq Acc Id: XM_039079084   ⟹   XP_038935012
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8737,151,456 - 37,183,815 (-)NCBI
mRatBN7.2735,265,215 - 35,297,245 (-)NCBI
RefSeq Acc Id: XM_063263465   ⟹   XP_063119535
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8737,159,306 - 37,196,550 (-)NCBI
RefSeq Acc Id: XR_010052970
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8737,159,306 - 37,196,550 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001129330 (Get FASTA)   NCBI Sequence Viewer  
  XP_038935012 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119535 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM16806 (Get FASTA)   NCBI Sequence Viewer  
  EDM16807 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000037617.5
Reference Protein Sequences
RefSeq Acc Id: NP_001129330   ⟸   NM_001135858
- UniProtKB: A6IG92 (UniProtKB/TrEMBL),   D3ZUJ8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000037617   ⟸   ENSRNOT00000029045
RefSeq Acc Id: XP_038935012   ⟸   XM_039079084
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063119535   ⟸   XM_063263465
- Peptide Label: isoform X2
Protein Domains
DUF1736

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZUJ8-F1-model_v2 AlphaFold D3ZUJ8 1-920 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13695168
Promoter ID:EPDNEW_R5693
Type:multiple initiation site
Name:Tmtc3_1
Description:transmembrane and tetratricopeptide repeat containing 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0740,217,054 - 40,217,114EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306351 AgrOrtholog
BioCyc Gene G2FUF-34236 BioCyc
BioCyc Pathway PWY-7922 [protein O-mannosylation II (mammals, core M1 and core M2)] BioCyc
  PWY-7979 [protein O-mannosylation III (mammals, core M3)] BioCyc
BioCyc Pathway Image PWY-7922 BioCyc
  PWY-7979 BioCyc
Ensembl Genes ENSRNOG00000006749 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000029045.5 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.10 UniProtKB/TrEMBL
InterPro DUF1736 UniProtKB/TrEMBL
  TPR-like_helical UniProtKB/TrEMBL
  TPR_1 UniProtKB/TrEMBL
  TPR_repeat UniProtKB/TrEMBL
KEGG Report rno:314785 UniProtKB/TrEMBL
NCBI Gene 314785 ENTREZGENE
PANTHER PROTEIN O-MANNOSYL-TRANSFERASE TMTC3 UniProtKB/TrEMBL
  PTHR44395 UniProtKB/TrEMBL
Pfam DUF1736 UniProtKB/TrEMBL
  TPR_1 UniProtKB/TrEMBL
  TPR_6 UniProtKB/TrEMBL
  TPR_8 UniProtKB/TrEMBL
PhenoGen Tmtc3 PhenoGen
PROSITE PROKAR_LIPOPROTEIN UniProtKB/TrEMBL
  TPR UniProtKB/TrEMBL
  TPR_REGION UniProtKB/TrEMBL
RatGTEx ENSRNOG00000006749 RatGTEx
SMART TPR UniProtKB/TrEMBL
Superfamily-SCOP Protein prenylyltransferase UniProtKB/TrEMBL
  SSF48452 UniProtKB/TrEMBL
UniProt A6IG92 ENTREZGENE, UniProtKB/TrEMBL
  D3ZUJ8 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-08-05 Tmtc3  transmembrane O-mannosyltransferase targeting cadherins 3  Tmtc3  transmembrane and tetratricopeptide repeat containing 3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Tmtc3  transmembrane and tetratricopeptide repeat containing 3   Tmtc3_predicted  transmembrane and tetratricopeptide repeat containing 3 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-30 Tmtc3_predicted  transmembrane and tetratricopeptide repeat containing 3 (predicted)  RGD1306351_predicted  similar to hypothetical protein (predicted)  Symbol and Name updated 1299863 APPROVED
2005-01-20 RGD1306351_predicted  similar to hypothetical protein (predicted)  LOC314785_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC314785_predicted  similar to hypothetical protein (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL