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Gene: Asnsd1 (asparagine synthetase domain containing 1) Rattus norvegicus

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Symbol:

Asnsd1

Name:

asparagine synthetase domain containing 1

RGD ID:

1306332

Description:

Predicted to enable asparagine synthase (glutamine-hydrolyzing) activity. Predicted to be involved in asparagine biosynthetic process. Predicted to act upstream of or within adipose tissue development; skeletal muscle tissue development; and transdifferentiation. Predicted to be part of RPAP3/R2TP/prefoldin-like complex. Orthologous to human ASNSD1 (asparagine synthetase domain containing 1); INTERACTS WITH (+)-schisandrin B; 6-propyl-2-thiouracil; bisphenol A.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

asparagine synthetase domain-containing protein 1; LOC299507; RGD1306332; similar to HCV NS3-transactivated protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ASNSD1 (asparagine synthetase domain containing 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Asnsd1 (asparagine synthetase domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Asnsd1 (asparagine synthetase domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ASNSD1 (asparagine synthetase domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ASNSD1 (asparagine synthetase domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Asdurf (ASNSD1 upstream open reading frame)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ASNSD1 (asparagine synthetase domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ASNSD1 (asparagine synthetase domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Asnsd1 (asparagine synthetase domain containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Asnsd1 (asparagine synthetase domain containing 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	ASNSD1 (asparagine synthetase domain containing 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	asnsd1 (asparagine synthetase domain containing 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG17486	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	M18.3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	YML096W	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	asnsd1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	55,618,799 - 55,631,064 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	55,618,799 - 55,631,064 (+)	Ensembl				GRCr8
mRatBN7.2	9	48,126,808 - 48,139,073 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	48,126,808 - 48,139,073 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	56,653,226 - 56,665,501 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	61,776,050 - 61,788,325 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	60,072,028 - 60,084,303 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	52,988,042 - 53,009,054 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	53,004,499 - 53,009,054 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	52,653,858 - 52,674,870 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	45,071,438 - 45,089,056 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	45,794,117 - 45,806,382 (+)	NCBI		Celera
RGSC_v3.1	9	45,085,914 - 45,090,363 (+)	NCBI
Cytogenetic Map	9	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

myopathy (ISS)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2-hydroxypropanoic acid (ISO)

2-methylcholine (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acrolein (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

calcitriol (ISO)

CGP 52608 (ISO)

cyclosporin A (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

endosulfan (EXP)

ethanol (ISO)

finasteride (EXP)

flutamide (EXP)

folic acid (ISO)

gentamycin (EXP)

kojic acid (ISO)

nefazodone (EXP)

ozone (ISO)

paracetamol (EXP,ISO)

perfluorooctanoic acid (EXP)

pirinixic acid (EXP)

rac-lactic acid (ISO)

sodium arsenite (ISO)

sulindac (EXP)

sunitinib (ISO)

testosterone (ISO)

tetrachloromethane (EXP)

thioacetamide (EXP)

titanium dioxide (ISO)

valdecoxib (EXP)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adipose tissue development (ISO)

amino acid biosynthetic process (IEA)

L-asparagine biosynthetic process (IEA)

muscle organ development (ISO)

skeletal muscle organ development (ISO)

skeletal muscle tissue development (ISO)

transdifferentiation (ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:21873635

Genomics

Comparative Map Data

Asnsd1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	55,618,799 - 55,631,064 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	55,618,799 - 55,631,064 (+)	Ensembl				GRCr8
mRatBN7.2	9	48,126,808 - 48,139,073 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	48,126,808 - 48,139,073 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	56,653,226 - 56,665,501 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	61,776,050 - 61,788,325 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	60,072,028 - 60,084,303 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	52,988,042 - 53,009,054 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	53,004,499 - 53,009,054 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	52,653,858 - 52,674,870 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	45,071,438 - 45,089,056 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	45,794,117 - 45,806,382 (+)	NCBI		Celera
RGSC_v3.1	9	45,085,914 - 45,090,363 (+)	NCBI
Cytogenetic Map	9	q22	NCBI

ASNSD1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	189,661,459 - 189,670,831 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	189,661,385 - 189,670,831 (+)	Ensembl			hg38	GRCh38
GRCh37	2	190,526,185 - 190,535,557 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	190,234,391 - 190,243,800 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	2	184,121,046 - 184,130,465 (+)	NCBI		Celera
Cytogenetic Map	2	q32.2	NCBI
HuRef	2	182,385,627 - 182,395,044 (+)	NCBI		HuRef
CHM1_1	2	190,531,977 - 190,541,410 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	190,150,718 - 190,160,077 (+)	NCBI		T2T-CHM13v2.0

Asnsd1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	53,383,776 - 53,391,911 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	53,383,776 - 53,391,911 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm39 Ensembl	1	53,364,666 - 53,391,826 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	53,344,617 - 53,352,752 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	53,344,617 - 53,352,752 (-)	Ensembl			mm10	GRCm38
GRCm38.p6 Ensembl	1	53,325,507 - 53,352,667 (-)	Ensembl			mm10	GRCm38
MGSCv37	1	53,401,488 - 53,409,543 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	53,289,189 - 53,297,244 (-)	NCBI		MGSCv36	mm8
Celera	1	53,884,871 - 53,892,797 (-)	NCBI		Celera
Cytogenetic Map	1	C1.1	NCBI
cM Map	1	26.99	NCBI

Asnsd1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	9,176,537 - 9,180,428 (-)	Ensembl
ChiLan1.0	NW_004955403	9,176,425 - 9,184,310 (-)	NCBI	ChiLan1.0	ChiLan1.0

ASNSD1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	92,358,526 - 92,363,240 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	92,373,509 - 92,378,223 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	76,967,753 - 76,977,139 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	194,887,530 - 194,896,927 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	194,887,530 - 194,896,927 (+)	Ensembl			panPan2	panpan1.1

ASNSD1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	426,366 - 430,668 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	426,367 - 439,619 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	1,398,987 - 1,407,724 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	317,522 - 326,246 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	317,579 - 326,244 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	329,827 - 338,551 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	298,320 - 307,057 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	326,264 - 335,001 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Asdurf
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	148,524,447 - 148,529,495 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936506	8,304,353 - 8,308,845 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936506	8,304,508 - 8,313,613 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ASNSD1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	94,266,701 - 94,272,119 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	15	94,261,910 - 94,272,129 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	105,299,188 - 105,309,291 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ASNSD1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	75,179,921 - 75,189,552 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	75,184,721 - 75,191,046 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666040	124,289,177 - 124,298,742 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Asnsd1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	4	121,868,713 - 121,871,858 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Asnsd1
38 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	22
Count of miRNA genes:	21
Interacting mature miRNAs:	22
Transcripts:	ENSRNOT00000059233
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2303170	Bp332	Blood pressure QTL 332	3.73	0.027	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	6714888	84474983	Rat
7411571	Bw138	Body weight QTL 138	14.3	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	9	40029925	85029925	Rat
1300180	Bw14	Body weight QTL 14	3.776		body mass (VT:0001259)	body weight (CMO:0000012)	9	31250432	68875676	Rat
8662828	Vetf6	Vascular elastic tissue fragility QTL 6	3.9		artery integrity trait (VT:0010639)	patent ductus arteriosus score (CMO:0002566)	9	44458256	99506504	Rat
61450	Ciaa3	CIA Autoantibody QTL 3	6.5		blood autoantibody amount (VT:0003725)	calculated serum anti-type 2 collagen antibody titer (CMO:0001279)	9	29567664	74567664	Rat
1598834	Memor11	Memory QTL 11	2.5		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	9	44458256	85262605	Rat
70186	Niddm26	Non-insulin dependent diabetes mellitus QTL 26	3.87		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	9	29567664	83835942	Rat
70218	Cm28	Cardiac mass QTL 28	8.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	9	41720295	86720295	Rat
2290450	Scl57	Serum cholesterol level QTL 57	4.15		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	9	44458256	121768150	Rat
7207805	Bmd88	Bone mineral density QTL 88	4		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	9	31250432	65651574	Rat
1581517	Bp284	Blood pressure QTL 284			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	39220186	84220186	Rat
731164	Uae25	Urinary albumin excretion QTL 25	3.5	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	48718864	108376862	Rat
7411656	Foco26	Food consumption QTL 26	9.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	40029925	85029925	Rat
4889943	Bss90	Bone structure and strength QTL 90	4.1		tibia area (VT:1000281)	tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)	9	54506504	99506504	Rat
1641894	Alcrsp12	Alcohol response QTL 12			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	34960590	79960590	Rat
1598823	Memor16	Memory QTL 16	1.9		exploratory behavior trait (VT:0010471)	difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	9	31456061	57460683	Rat

Markers in Region

RH133567

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	48,138,753 - 48,138,953 (+)	MAPPER	mRatBN7.2
mRatBN7.2	15	81,737,740 - 81,737,939 (+)	MAPPER	mRatBN7.2
Rnor_6.0	15	89,116,357 - 89,116,555	NCBI	Rnor6.0
Rnor_6.0	9	53,008,735 - 53,008,934	NCBI	Rnor6.0
Rnor_5.0	15	92,608,221 - 92,608,419	UniSTS	Rnor5.0
Rnor_5.0	9	52,674,551 - 52,674,750	UniSTS	Rnor5.0
RGSC_v3.4	15	89,027,338 - 89,027,536	UniSTS	RGSC3.4
RGSC_v3.4	9	45,088,737 - 45,088,936	UniSTS	RGSC3.4
Celera	9	45,806,063 - 45,806,262	UniSTS
Celera	15	80,862,882 - 80,863,080	UniSTS
Cytogenetic Map	9	q22	UniSTS
Cytogenetic Map	15	q22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001106763	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000059233 ⟹ ENSRNOP00000056002

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	48,126,808 - 48,139,073 (+)	Ensembl
Rnor_6.0 Ensembl	9	53,004,499 - 53,009,054 (+)	Ensembl

RefSeq Acc Id:

NM_001106763 ⟹ NP_001100233

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	55,618,799 - 55,631,064 (+)	NCBI
mRatBN7.2	9	48,126,808 - 48,139,073 (+)	NCBI
Rnor_6.0	9	52,988,042 - 53,009,054 (+)	NCBI
Rnor_5.0	9	52,653,858 - 52,674,870 (+)	NCBI
RGSC_v3.4	9	45,071,438 - 45,089,056 (+)	RGD
Celera	9	45,794,117 - 45,806,382 (+)	RGD

Sequence:

show sequence

GGGCCTGCCGCCTGCTGTTTCATCCACCGCGGTTCCTCCGTTCGGTGCGGCGTGGCGATGCCTA
GCGGTGCGGAGCACCCCGGAGACAGCGCCGCGCCGGGACCCACCCGCACATCGACCGCGCACGC
CGAGGCCCTTAGCAGTAAGATTAAAGAACAGAAAGTTATTGTGGATGAACTTTCTAACCTGAAG
AAGAATCGGAAAGTATACAAGCAGCAACAGAACAGCAACATATTCTTTCTTGAAGAACGAACAA
AAATGTTGTCTGAAAGCAAAAATAAATTAGACGAACTAAGAAAAGATTACCAAGAAGTAGAAAA
CTCAGAGACAACCAAAGTCAAGACACAGTCAGCCTGACTTCACATAACCATGTGTGGCATTTGC
TGTTCTGTGAGTTTCTCTGTTGAGCACTTCAGTAAAGATTTAAAAGAGGATTTGCTGTATAATC
TCAGACGGCGGGGCCCTAGTAGCAGCAGACAGTTATTAAAATCTGCTGTTAACTATCAGTGTTT
ATTTTCTGGTCATGTTCTTCATTTAAGAGGTGTTTTGACTGCCCAACCTGTGGAAGATGAATGT
GGCAATGTGTTCTTATGGAATGGAGAAGTTTTTAATGGAGTACAGGTTGAAGCAGAAGATAATG
ATACCCAGGTCATGTTCAGTAGCCTTTCTGCCTGTAAGAATGAGTCTGAAATACTGTCGCTCTT
CTCTAAAGTGCACGGCCCGTGGTCGTTTATATATTACCAGGCCTCCAGCCATTGCTTGTGGTTT
GGCAGGGACGTGTTTGGCCGCCGTAGCTTGCTTTGGCAGTTTAGTAACCTGGGCAAGAGTTTCT
GCCTCTCTTCAGTTGGTGCCCAGATATCCGGAGGAGCAGACCAGTGGCAAGAAGTTCCAGCATC
TGGAATCTTCCAAATTGATCTCAATTCTGCTGCTGTTTCCAGATGTGTGATCTTAAAATTATAT
CCTTGGAAATCTATTTCTAAGGAGAATGTTGCTGAAGAATGTGCTAATGAGCTGACTCAGACTC
CAGCAGAATTGCCAGAGTTTGTATCAGTGGTAATAAATAAAGCCAACTTGTACCTCTCAAAACC
CATTGTCCCCTTAAACAAGACGCTGCCTGAGGTACCCTTGGAGACCCAATGTAGAAACAGTTCC
AGCGTTCCAGGGTCAAGAGAGACACTTGAGATACTTCTTAGAGATGAACACACACAAAGAATAG
TTCAGCAGTTCATTGACGTCCTCAGTGTTGCAGTCAAGAGACGCACCTTATGTTTAGCTAGGGA
AGAAAACTTGGCATCAAAGGACGTTTTAAAAACTTGTGGTAAGAAAGCAAACATTGCGATCCTG
TTTTCCGGAGGTGTTGATTCTATGGTGATCGCAGCCCTTGCTGATCGTCACATTCCTTTAGACG
AGCCAATTGACCTTCTGAATGTGGCTTTTTTACCTAAACAAAAGGCAGGGCTGCCTATTCCTAA
CGTAGAAAGAAACCAGCAAAACCACTGTGAGATCCCTCCTGAAGAGTCCTCTCCGAGCACTGCT
GTGCCTCAGGGTCCACATGACGCCGAGGTGCCAGATCGAGTCACAGGAAAAGCAGGACTGAAGG
AACTACAGTCTGTCAACCCTGCTCGAACTTGGAATTTTGTGGAAATTAATGTTTCTCTTGAAGA
ATTACAAAAACTAAGAAGAGCTCGAATATGTCACTTAGTTCAGCCATCGGACACAGTTCTGGAT
GATAGTATTGGCTGTGCTGTCTGGTTTGCATCTAGAGGAATCGGTTGGTTGGTGACCGAGGATG
CTGTGCAGTCTTACAAGAGCAGTGCAAAGGTGATTCTCACTGGGATTGGTGCAGATGAGCAGTT
GGCAGGTTATTCCCGTCATCGTGCCCGCTTTCAGTCTCTTGGCCTAGAAGGATTGAATGAGGAA
ATAGCAATGGAATTGGGTCGCATTTCTTCTAGAAACCTTGGTCGTGATGATAGAGTTATTGCTG
ATCATGGAAAGGAAGCAAGATTTCCTTTTCTGGATGAAAATGTTGTATCTTTCCTGAATTCTCT
GCCAGTTTGGGAAAAGGTAGACCTGGCTTTGCCCCGTGGAGTTGGTGAGAAGCTCATTTTACGC
CTTGCAGCTGTGGAACTTGGTCTCTCATCCTCTGCCCTTCTGCCCAAACGGGCCATACAATTTG
GATCTAGAATTGCAAAACTAGAAGAAACTAATGAGAAGGCATCTGATAAGTGTGGAAGGCTCCA
AATCCTACCTTAGACAACCTCTCTCAAGATTACATAATGACTATTCTACCATATAACAGTACTG
TGTGACAGTTACCTCAAAATAAACAGCTGCCGCCTTACGGGATGTAGTAGTCTTGC

hide sequence

Protein Sequences


Protein RefSeqs	NP_001100233	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL99120	(Get FASTA)	NCBI Sequence Viewer
	EDL99121	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000056002
	ENSRNOP00000056002.2

RefSeq Acc Id:

NP_001100233 ⟸ NM_001106763

- UniProtKB:

A6INT9 (UniProtKB/TrEMBL), D3ZWR3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MCGICCSVSFSVEHFSKDLKEDLLYNLRRRGPSSSRQLLKSAVNYQCLFSGHVLHLRGVLTAQP
VEDECGNVFLWNGEVFNGVQVEAEDNDTQVMFSSLSACKNESEILSLFSKVHGPWSFIYYQASS
HCLWFGRDVFGRRSLLWQFSNLGKSFCLSSVGAQISGGADQWQEVPASGIFQIDLNSAAVSRCV
ILKLYPWKSISKENVAEECANELTQTPAELPEFVSVVINKANLYLSKPIVPLNKTLPEVPLETQ
CRNSSSVPGSRETLEILLRDEHTQRIVQQFIDVLSVAVKRRTLCLAREENLASKDVLKTCGKKA
NIAILFSGGVDSMVIAALADRHIPLDEPIDLLNVAFLPKQKAGLPIPNVERNQQNHCEIPPEES
SPSTAVPQGPHDAEVPDRVTGKAGLKELQSVNPARTWNFVEINVSLEELQKLRRARICHLVQPS
DTVLDDSIGCAVWFASRGIGWLVTEDAVQSYKSSAKVILTGIGADEQLAGYSRHRARFQSLGLE
GLNEEIAMELGRISSRNLGRDDRVIADHGKEARFPFLDENVVSFLNSLPVWEKVDLALPRGVGE
KLILRLAAVELGLSSSALLPKRAIQFGSRIAKLEETNEKASDKCGRLQILP

hide sequence

Ensembl Acc Id:

ENSRNOP00000056002 ⟸ ENSRNOT00000059233

Protein Domains

Glutamine amidotransferase type-2

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZWR3-F1-model_v2	AlphaFold	D3ZWR3	1-627	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306332	AgrOrtholog
BioCyc Gene	G2FUF-27631	BioCyc
Ensembl Genes	ENSRNOG00000003942	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000059233	ENTREZGENE
	ENSRNOT00000059233.4	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.620	UniProtKB/TrEMBL
	3.60.20.10	UniProtKB/TrEMBL
InterPro	Asn_synthase	UniProtKB/TrEMBL
	Asn_synthetase_domain	UniProtKB/TrEMBL
	GATase_II	UniProtKB/TrEMBL
	Ntn_hydrolases_N	UniProtKB/TrEMBL
	Rossmann-like_a/b/a_fold	UniProtKB/TrEMBL
KEGG Report	rno:299507	UniProtKB/TrEMBL
NCBI Gene	299507	ENTREZGENE
PANTHER	ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1	UniProtKB/TrEMBL
	ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1	UniProtKB/TrEMBL
Pfam	Asn_synthase	UniProtKB/TrEMBL
	GATase_7	UniProtKB/TrEMBL
PhenoGen	Asnsd1	PhenoGen
PROSITE	GATASE_TYPE_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000003942	RatGTEx
Superfamily-SCOP	Adenine nucleotide alpha hydrolases-like	UniProtKB/TrEMBL
	SSF56235	UniProtKB/TrEMBL
UniProt	A6INT9	ENTREZGENE, UniProtKB/TrEMBL
	D3ZWR3	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-07	Asnsd1	asparagine synthetase domain containing 1	RGD1306332_predicted	similar to HCV NS3-transactivated protein 1 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	RGD1306332_predicted	similar to HCV NS3-transactivated protein 1 (predicted)	LOC299507_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC299507_predicted	similar to HCV NS3-transactivated protein 1 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - MGI