Aamp (angio-associated, migratory cell protein) - Rat Genome Database

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Gene: Aamp (angio-associated, migratory cell protein) Rattus norvegicus
Analyze
Symbol: Aamp
Name: angio-associated, migratory cell protein
RGD ID: 1306281
Description: Predicted to enable heparin binding activity. Predicted to be involved in smooth muscle cell migration. Predicted to be located in cell surface. Orthologous to human AAMP (angio associated migratory cell protein); INTERACTS WITH 2,6-dinitrotoluene; bisphenol A; flutamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: angio-associated migratory cell protein; angio-associated migratory protein; LOC301512
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8983,312,519 - 83,318,325 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl983,312,519 - 83,318,325 (-)EnsemblGRCr8
mRatBN7.2975,863,382 - 75,869,188 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl975,863,389 - 75,868,547 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx984,308,918 - 84,314,727 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0989,437,839 - 89,443,648 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0987,824,055 - 87,829,864 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0981,560,836 - 81,566,642 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl981,560,842 - 81,566,642 (-)Ensemblrn6Rnor6.0
Rnor_5.0981,327,383 - 81,333,189 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4973,606,372 - 73,612,178 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera973,439,867 - 73,445,673 (-)NCBICelera
RGSC_v3.1973,753,361 - 73,758,333 (-)NCBI
Cytogenetic Map9q33NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7743515   PMID:10329261   PMID:12477932   PMID:18634987   PMID:26350504  


Genomics

Comparative Map Data
Aamp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8983,312,519 - 83,318,325 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl983,312,519 - 83,318,325 (-)EnsemblGRCr8
mRatBN7.2975,863,382 - 75,869,188 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl975,863,389 - 75,868,547 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx984,308,918 - 84,314,727 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0989,437,839 - 89,443,648 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0987,824,055 - 87,829,864 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0981,560,836 - 81,566,642 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl981,560,842 - 81,566,642 (-)Ensemblrn6Rnor6.0
Rnor_5.0981,327,383 - 81,333,189 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4973,606,372 - 73,612,178 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera973,439,867 - 73,445,673 (-)NCBICelera
RGSC_v3.1973,753,361 - 73,758,333 (-)NCBI
Cytogenetic Map9q33NCBI
AAMP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382218,264,129 - 218,270,137 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2218,264,125 - 218,270,178 (-)Ensemblhg38GRCh38
GRCh372219,128,852 - 219,134,860 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362218,837,096 - 218,843,137 (-)NCBIBuild 36Build 36hg18NCBI36
Celera2212,895,431 - 212,901,472 (-)NCBICelera
Cytogenetic Map2q35NCBI
HuRef2210,981,949 - 210,987,990 (-)NCBIHuRef
CHM1_12219,135,341 - 219,141,382 (-)NCBICHM1_1
T2T-CHM13v2.02218,749,830 - 218,755,838 (-)NCBIT2T-CHM13v2.0
Aamp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39174,318,999 - 74,324,833 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl174,318,999 - 74,323,897 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38174,279,840 - 74,284,738 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl174,279,840 - 74,284,738 (-)Ensemblmm10GRCm38
MGSCv37174,326,414 - 74,331,312 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36174,213,054 - 74,217,873 (-)NCBIMGSCv36mm8
Celera174,841,193 - 74,846,091 (-)NCBICelera
Cytogenetic Map1C3NCBI
cM Map138.53NCBI
Aamp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545315,104,229 - 15,112,468 (+)Ensembl
ChiLan1.0NW_00495545315,104,229 - 15,109,487 (+)NCBIChiLan1.0ChiLan1.0
AAMP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213120,896,307 - 120,902,508 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B120,911,274 - 120,917,496 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B105,523,495 - 105,529,550 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B224,121,531 - 224,127,369 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B224,121,531 - 224,127,369 (-)EnsemblpanPan2panpan1.1
AAMP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13724,943,660 - 24,948,589 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3724,937,081 - 24,948,529 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3725,764,204 - 25,768,657 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03724,959,719 - 24,964,653 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3724,959,719 - 24,964,646 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13724,865,431 - 24,869,882 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03724,799,684 - 24,804,137 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03724,819,318 - 24,823,771 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Aamp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303174,452,032 - 174,456,962 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936569790,510 - 799,896 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936569794,814 - 799,770 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AAMP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15120,339,768 - 120,345,311 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.115120,339,765 - 120,345,451 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
AAMP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110104,145,818 - 104,151,782 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10104,146,222 - 104,151,752 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604095,249,960 - 95,256,004 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Aamp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248236,761,254 - 6,768,545 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248236,761,343 - 6,766,573 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Aamp
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v14147,731,807 - 147,737,593 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Aamp
97 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:62
Count of miRNA genes:54
Interacting mature miRNAs:57
Transcripts:ENSRNOT00000019497
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303170Bp332Blood pressure QTL 3323.730.027arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)9671488884474983Rat
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)956047863101047863Rat
7411571Bw138Body weight QTL 13814.30.001body mass (VT:0001259)body weight gain (CMO:0000420)94002992585029925Rat
1582203Gluco19Glucose level QTL 193.30.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)963376862108376862Rat
724515Uae16Urinary albumin excretion QTL 168urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)965657365108376720Rat
61352Bp34Blood pressure QTL 345arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)98216882386720295Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)94445825699506504Rat
1598834Memor11Memory QTL 112.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)94445825685262605Rat
70186Niddm26Non-insulin dependent diabetes mellitus QTL 263.87blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)92956766483835942Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)94172029586720295Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)964220169109220169Rat
1578760Cm53Cardiac mass QTL 533.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)964220169109220169Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)944458256121768150Rat
1581580Uae34Urinary albumin excretion QTL 34urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)964220169109220169Rat
1581517Bp284Blood pressure QTL 284arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)93922018684220186Rat
1300134Bp185Blood pressure QTL 1853.73arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)968875497121768150Rat
1354626Bvd1Brain ventricular dilatation QTL 13.730.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)983161999118999486Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)948718864108376862Rat
7411656Foco26Food consumption QTL 269.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)94002992585029925Rat
1578757Pur6Proteinuria QTL 63.30.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)964220169109220169Rat
4889943Bss90Bone structure and strength QTL 904.1tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)95450650499506504Rat

Markers in Region
Aamp-rs  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2975,863,487 - 75,863,651 (+)MAPPERmRatBN7.2
Rnor_6.0981,560,942 - 81,561,105NCBIRnor6.0
Rnor_5.0981,327,489 - 81,327,652UniSTSRnor5.0
RGSC_v3.4973,606,478 - 73,606,641UniSTSRGSC3.4
Celera973,439,973 - 73,440,136UniSTS
Cytogenetic Map9q33UniSTS
RH128430  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2975,863,453 - 75,863,657 (+)MAPPERmRatBN7.2
Rnor_6.0981,560,908 - 81,561,111NCBIRnor6.0
Rnor_5.0981,327,455 - 81,327,658UniSTSRnor5.0
RGSC_v3.4973,606,444 - 73,606,647UniSTSRGSC3.4
Celera973,439,939 - 73,440,142UniSTS
RH 3.4 Map9708.39UniSTS
Cytogenetic Map9q33UniSTS
RH128628  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2975,870,710 - 75,870,916 (+)MAPPERmRatBN7.2
Rnor_6.0981,568,165 - 81,568,370NCBIRnor6.0
Rnor_5.0981,334,712 - 81,334,917UniSTSRnor5.0
RGSC_v3.4973,613,701 - 73,613,906UniSTSRGSC3.4
Celera973,447,196 - 73,447,401UniSTS
Cytogenetic Map9q33UniSTS
AI854243  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2975,869,541 - 75,870,766 (+)MAPPERmRatBN7.2
Rnor_6.0981,566,996 - 81,568,220NCBIRnor6.0
Rnor_5.0981,333,543 - 81,334,767UniSTSRnor5.0
RGSC_v3.4973,612,532 - 73,613,756UniSTSRGSC3.4
Celera973,446,027 - 73,447,251UniSTS
Cytogenetic Map9q33UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000019497   ⟹   ENSRNOP00000019497
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl983,312,519 - 83,318,325 (-)Ensembl
mRatBN7.2 Ensembl975,863,389 - 75,868,547 (-)Ensembl
Rnor_6.0 Ensembl981,560,842 - 81,566,096 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000080345   ⟹   ENSRNOP00000070042
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl981,565,611 - 81,566,642 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000083582   ⟹   ENSRNOP00000070023
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl981,563,099 - 81,565,416 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000085901
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl981,562,535 - 81,563,144 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000089354
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl981,562,684 - 81,563,470 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000090267
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl981,563,198 - 81,563,947 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000157624   ⟹   ENSRNOP00000106938
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl983,312,519 - 83,317,168 (-)Ensembl
RefSeq Acc Id: NM_001106920   ⟹   NP_001100390
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8983,312,519 - 83,318,325 (-)NCBI
mRatBN7.2975,863,382 - 75,869,188 (-)NCBI
Rnor_6.0981,560,836 - 81,566,642 (-)NCBI
Rnor_5.0981,327,383 - 81,333,189 (-)NCBI
RGSC_v3.4973,606,372 - 73,612,178 (-)RGD
Celera973,439,867 - 73,445,673 (-)RGD
Sequence:
RefSeq Acc Id: XM_006245167   ⟹   XP_006245229
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8983,312,524 - 83,317,330 (-)NCBI
mRatBN7.2975,863,383 - 75,868,265 (-)NCBI
Rnor_6.0981,560,837 - 81,565,692 (-)NCBI
Rnor_5.0981,327,383 - 81,333,189 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006245168   ⟹   XP_006245230
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8983,312,524 - 83,317,000 (-)NCBI
mRatBN7.2975,863,383 - 75,867,979 (-)NCBI
Rnor_6.0981,560,837 - 81,565,489 (-)NCBI
Rnor_5.0981,327,383 - 81,333,189 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006245169   ⟹   XP_006245231
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8983,312,524 - 83,317,002 (-)NCBI
mRatBN7.2975,863,383 - 75,867,979 (-)NCBI
Rnor_6.0981,560,837 - 81,565,489 (-)NCBI
Rnor_5.0981,327,383 - 81,333,189 (-)NCBI
Sequence:
RefSeq Acc Id: NP_001100390   ⟸   NM_001106920
- UniProtKB: A6JVT3 (UniProtKB/TrEMBL),   B0K024 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006245229   ⟸   XM_006245167
- Peptide Label: isoform X1
- UniProtKB: B0K024 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006245230   ⟸   XM_006245168
- Peptide Label: isoform X2
- UniProtKB: G3V7V2 (UniProtKB/TrEMBL),   B0K024 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006245231   ⟸   XM_006245169
- Peptide Label: isoform X3
- UniProtKB: B0K024 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000070042   ⟸   ENSRNOT00000080345
Ensembl Acc Id: ENSRNOP00000019497   ⟸   ENSRNOT00000019497
Ensembl Acc Id: ENSRNOP00000070023   ⟸   ENSRNOT00000083582
Ensembl Acc Id: ENSRNOP00000106938   ⟸   ENSRNOT00000157624

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-G3V7V2-F1-model_v2 AlphaFold G3V7V2 1-435 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696749
Promoter ID:EPDNEW_R7268
Type:initiation region
Name:Aamp_2
Description:angio-associated, migratory cell protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R7269  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0981,565,393 - 81,565,453EPDNEW
RGD ID:13696744
Promoter ID:EPDNEW_R7269
Type:initiation region
Name:Aamp_1
Description:angio-associated, migratory cell protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R7268  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0981,565,684 - 81,565,744EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306281 AgrOrtholog
BioCyc Gene G2FUF-27143 BioCyc
Ensembl Genes ENSRNOG00000014399 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000019497 ENTREZGENE
  ENSRNOT00000019497.8 UniProtKB/TrEMBL
  ENSRNOT00000157624 ENTREZGENE
  ENSRNOT00000157624.1 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:9028034 IMAGE-MGC_LOAD
InterPro WD40/YVTN_repeat-like_dom UniProtKB/TrEMBL
  WD40_repeat UniProtKB/TrEMBL
  WD40_repeat_CS UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/TrEMBL
  WD_repeat_multifunction UniProtKB/TrEMBL
KEGG Report rno:301512 UniProtKB/TrEMBL
MGC_CLONE MGC:188733 IMAGE-MGC_LOAD
NCBI Gene 301512 ENTREZGENE
PANTHER ANGIO-ASSOCIATED MIGRATORY CELL PROTEIN UniProtKB/TrEMBL
  MITOCHONDRIAL DIVISION PROTEIN 1-RELATED UniProtKB/TrEMBL
Pfam WD40 UniProtKB/TrEMBL
PhenoGen Aamp PhenoGen
PROSITE WD_REPEATS_1 UniProtKB/TrEMBL
  WD_REPEATS_2 UniProtKB/TrEMBL
  WD_REPEATS_REGION UniProtKB/TrEMBL
RatGTEx ENSRNOG00000014399 RatGTEx
SMART WD40 UniProtKB/TrEMBL
Superfamily-SCOP WD40_like UniProtKB/TrEMBL
UniProt A0ABK0LYE5_RAT UniProtKB/TrEMBL
  A6JVT3 ENTREZGENE, UniProtKB/TrEMBL
  B0K024 ENTREZGENE, UniProtKB/TrEMBL
  G3V7V2 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-08-29 Aamp  angio-associated, migratory cell protein  Aamp  angio-associated migratory protein   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Aamp  angio-associated migratory protein   Aamp_predicted  angio-associated migratory protein (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Aamp_predicted  angio-associated migratory protein (predicted)      Symbol and Name status set to approved 70820 APPROVED