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Gene: Kif21b (kinesin family member 21B) Rattus norvegicus

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Symbol:

Kif21b

Name:

kinesin family member 21B

RGD ID:

1306206

Description:

Predicted to enable ATP hydrolysis activity; microtubule binding activity; and microtubule motor activity. Predicted to be involved in regulation of postsynaptic membrane neurotransmitter receptor levels and retrograde dendritic transport. Predicted to act upstream of or within corpus callosum development. Predicted to be located in several cellular components, including cytoplasmic vesicle; dendrite cytoplasm; and growth cone. Predicted to be part of kinesin complex. Predicted to be active in glutamatergic synapse; microtubule; and postsynaptic endosome. Orthologous to human KIF21B (kinesin family member 21B); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; acetamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

kinesin-like protein KIF21B; LOC289397; MGC189181

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	KIF21B (kinesin family member 21B)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Kif21b (kinesin family member 21B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Kif21b (kinesin family member 21B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	KIF21B (kinesin family member 21B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	KIF21B (kinesin family member 21B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Kif21b (kinesin family member 21B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	KIF21B (kinesin family member 21B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	KIF21B (kinesin family member 21B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Kif21b (kinesin family member 21B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	KIF21A (kinesin family member 21A)	HGNC	OrthoDB
Alliance orthologs ³
Mus musculus (house mouse):	Kif21b (kinesin family member 21B)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	KIF21B (kinesin family member 21B)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	kif21b (kinesin family member 21B)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	kif21b (kinesin family member 21B)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	klp-12	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	klp-12	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Klp31E	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Klp31E	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	kif21b	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	kif21b	Alliance	DIOPT (OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	50,127,842 - 50,177,822 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	50,127,842 - 50,177,822 (+)	Ensembl				GRCr8
mRatBN7.2	13	47,576,129 - 47,626,112 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	47,576,160 - 47,626,127 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	13	50,184,219 - 50,230,403 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	51,472,315 - 51,518,499 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	48,739,948 - 48,786,089 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	52,976,505 - 53,026,750 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	52,976,507 - 53,023,103 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	58,030,695 - 58,080,585 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	49,162,330 - 49,202,704 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	47,889,588 - 47,934,922 (+)	NCBI		Celera
RGSC_v3.1	13	49,171,886 - 49,216,231 (+)	NCBI
Cytogenetic Map	13	q13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

lissencephaly (ISO)

long QT syndrome (ISO)

Neurodevelopmental Disorders (ISO)

syndromic intellectual disability (ISO)

ulcerative colitis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(S)-nicotine (ISO)

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

2,4,4'-trichlorobiphenyl (ISO)

4,4'-sulfonyldiphenol (ISO)

acetamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

alpha-Zearalanol (EXP)

amphetamine (EXP)

aristolochic acid A (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

buta-1,3-diene (ISO)

butanal (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chloroprene (ISO)

cisplatin (ISO)

cyclophosphamide (ISO)

cyclosporin A (ISO)

diarsenic trioxide (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (ISO)

dioxygen (EXP,ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

endosulfan (EXP)

ethanol (ISO)

fluoranthene (ISO)

FR900359 (ISO)

furan (EXP)

gamma-hexachlorocyclohexane (ISO)

gentamycin (EXP)

inulin (ISO)

mono(2-ethylhexyl) phthalate (ISO)

nickel atom (ISO)

nicotine (ISO)

ochratoxin A (ISO)

okadaic acid (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

PCB138 (ISO)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (EXP,ISO)

phenylmercury acetate (ISO)

SB 431542 (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

succimer (ISO)

tetraphene (ISO)

thimerosal (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triclosan (ISO)

tris(2-butoxyethyl) phosphate (ISO)

trovafloxacin (ISO)

tungsten (ISO)

urethane (ISO)

valproic acid (EXP,ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

brain development (ISO)

corpus callosum development (ISO)

microtubule-based movement (IBA,IEA)

regulation of postsynaptic membrane neurotransmitter receptor levels (ISO)

retrograde dendritic transport (ISO)

Cellular Component

axon (IEA)

cytoplasm (IBA)

cytoplasmic vesicle (IEA)

cytoskeleton (IEA)

dendrite (IEA)

dendrite cytoplasm (IEA)

glutamatergic synapse (ISO)

growth cone (IEA)

kinesin complex (IBA)

microtubule (IBA,IEA)

postsynaptic endosome (ISO)

Molecular Function

ATP binding (IEA)

ATP hydrolysis activity (IBA)

cytoskeletal motor activity (IEA)

microtubule binding (IBA,IEA)

microtubule motor activity (IBA,IEA)

nucleotide binding (IEA)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:14595441	PMID:17511870	PMID:27817978

Genomics

Comparative Map Data

Kif21b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	50,127,842 - 50,177,822 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	13	50,127,842 - 50,177,822 (+)	Ensembl				GRCr8
mRatBN7.2	13	47,576,129 - 47,626,112 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	47,576,160 - 47,626,127 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	13	50,184,219 - 50,230,403 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	51,472,315 - 51,518,499 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	48,739,948 - 48,786,089 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	52,976,505 - 53,026,750 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	52,976,507 - 53,023,103 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	13	58,030,695 - 58,080,585 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	13	49,162,330 - 49,202,704 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	13	47,889,588 - 47,934,922 (+)	NCBI		Celera
RGSC_v3.1	13	49,171,886 - 49,216,231 (+)	NCBI
Cytogenetic Map	13	q13	NCBI

KIF21B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	200,969,390 - 201,023,714 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	200,969,390 - 201,023,714 (-)	Ensembl			hg38	GRCh38
GRCh37	1	200,938,518 - 200,992,842 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	199,205,143 - 199,259,451 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	1	174,062,559 - 174,116,875 (-)	NCBI		Celera
Cytogenetic Map	1	q32.1	ENTREZGENE
HuRef	1	172,105,326 - 172,159,811 (-)	NCBI		HuRef
CHM1_1	1	202,361,180 - 202,415,474 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	200,226,336 - 200,280,656 (-)	NCBI		T2T-CHM13v2.0

Kif21b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	136,059,128 - 136,105,739 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	136,059,127 - 136,105,736 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	136,131,390 - 136,178,001 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	136,131,389 - 136,177,998 (+)	Ensembl			mm10	GRCm38
MGSCv37	1	138,027,978 - 138,074,591 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	137,947,812 - 137,994,425 (+)	NCBI		MGSCv36	mm8
Celera	1	138,766,523 - 138,813,206 (+)	NCBI		Celera
Cytogenetic Map	1	E4	NCBI
cM Map	1	59.61	NCBI

Kif21b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955406	37,139,168 - 37,187,543 (-)	Ensembl
ChiLan1.0	NW_004955406	37,139,168 - 37,187,543 (-)	NCBI	ChiLan1.0	ChiLan1.0

KIF21B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	48,356,998 - 48,411,117 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	48,320,617 - 48,374,768 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	176,569,305 - 176,623,403 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	180,872,306 - 180,925,725 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	180,872,306 - 180,925,725 (-)	Ensembl			panPan2	panpan1.1

KIF21B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	2,185,040 - 2,231,046 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	2,184,733 - 2,231,058 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	1,869,435 - 1,915,454 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	1,831,724 - 1,877,748 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	1,831,431 - 1,877,751 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	1,815,013 - 1,861,021 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	1,917,719 - 1,960,987 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	1,947,492 - 1,993,529 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Kif21b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	74,111,603 - 74,159,974 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936567	3,346,217 - 3,395,258 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936567	3,346,655 - 3,394,656 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

KIF21B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	23,445,000 - 23,491,181 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	10	23,444,997 - 23,491,081 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	27,882,023 - 27,921,391 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

KIF21B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	28,379,019 - 28,434,172 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	28,379,014 - 28,434,170 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666055	29,178,534 - 29,233,407 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Kif21b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624807	9,633,281 - 9,677,260 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624807	9,633,009 - 9,681,228 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in Kif21b
355 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	140
Count of miRNA genes:	88
Interacting mature miRNAs:	91
Transcripts:	ENSRNOT00000011324
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1298066	Bp159	Blood pressure QTL 159		0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	48639634	93639634	Rat
10755495	Bp387	Blood pressure QTL 387	3.78		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	37216241	90057603	Rat
9589141	Insul28	Insulin level QTL 28	10.82	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	13	11866254	56866254	Rat
6893344	Cm79	Cardiac mass QTL 79	1.5	0.04	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	13	46272922	51216694	Rat
1354655	Bp241	Blood pressure QTL 241	3.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	38975045	103588154	Rat
70220	Bp55	Blood pressure QTL 55	5.75		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	13	39924693	84924693	Rat
71119	Thym2	Thymus enlargement QTL 2	3.8		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	13	48749814	87285480	Rat
61391	Bp5	Blood pressure QTL 5	5.6		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	24853925	69853925	Rat
4889861	Pur29	Proteinuria QTL 29	13.8	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	13	39968211	83286298	Rat
2317040	Aia21	Adjuvant induced arthritis QTL 21	2.75		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	13	12384320	57384320	Rat
631645	Bp121	Blood pressure QTL 121	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	17468282	62468282	Rat
2317046	Aia8	Adjuvant induced arthritis QTL 8	3.9700000286102295		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	13	12384320	57384320	Rat
619615	Bp80	Blood pressure QTL 80		0.0354	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	7421791	87286911	Rat
1331784	Bp222	Blood pressure QTL 222	2.944		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	24335432	55601132	Rat
61340	Bp25	Blood pressure QTL 25	4.2	0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	37087983	82087983	Rat
1581573	Uae36	Urinary albumin excretion QTL 36			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	6002008	88706694	Rat
1549897	Stresp12	Stress response QTL 12	3.35		stress-related behavior trait (VT:0010451)	number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)	13	40983585	85983585	Rat
724564	Uae11	Urinary albumin excretion QTL 11	5.7		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	13	47354258	94285672	Rat
7207885	Glom27	Glomerulus QTL 27	3.9		kidney glomerulus integrity trait (VT:0010546)	kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)	13	21120177	109350286	Rat
4145117	Mcs27	Mammary carcinoma susceptibility QTL 27		0.0001	mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	13	45990077	50392939	Rat
1558644	Cm45	Cardiac mass QTL 45	3.6	0.002	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	13	26244808	71244808	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	13	33794096	78794096	Rat
61349	Bp31	Blood pressure QTL 31	5.75		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	13	39924693	84924693	Rat
2303563	Bw89	Body weight QTL 89	6		body mass (VT:0001259)	body weight (CMO:0000012)	13	34834947	79834947	Rat
1354621	Rf47	Renal function QTL 47	3.7		kidney renin amount (VT:0010559)	kidney renin level (CMO:0002166)	13	11081740	103588154	Rat
2301962	Cm72	Cardiac mass QTL 72	4.12		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	13	33794096	60914504	Rat
1581554	Pur11	Proteinuria QTL 11			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	6002008	88706694	Rat
12879477	Bp401	Blood pressure QTL 401			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	39814726	84814726	Rat
1331750	Bp220	Blood pressure QTL 220	2.98		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	39968211	84968211	Rat
6893338	Cm76	Cardiac mass QTL 76	0	0.99	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	13	26244808	71244808	Rat
12879472	Bp399	Blood pressure QTL 399			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	47780418	50392939	Rat
11530006	Niddm72	Non-insulin dependent diabetes mellitus QTL 72		0.001	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	13	38286298	83286298	Rat
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	1	103588154	Rat
9589164	Gluco66	Glucose level QTL 66	6.67	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	13	17711336	62711336	Rat
7411662	Foco29	Food consumption QTL 29	20.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	13	11866254	56866254	Rat

Markers in Region

AU047830

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	13	50,149,937 - 50,150,157 (+)	Marker Load Pipeline
mRatBN7.2	13	47,598,224 - 47,598,446 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	52,998,587 - 52,998,806	NCBI	Rnor6.0
Rnor_5.0	13	58,052,789 - 58,053,008	UniSTS	Rnor5.0
RGSC_v3.4	13	49,170,730 - 49,170,949	UniSTS	RGSC3.4
Celera	13	47,911,632 - 47,911,851	UniSTS
Cytogenetic Map	13	q13	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	143	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001415800	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249857	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090608	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272196	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272197	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272198	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC168904	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473958	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000011324 ⟹ ENSRNOP00000011324

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	50,127,842 - 50,173,550 (+)	Ensembl
mRatBN7.2 Ensembl	13	47,576,160 - 47,622,317 (+)	Ensembl
Rnor_6.0 Ensembl	13	52,976,522 - 53,022,955 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000090599 ⟹ ENSRNOP00000074306

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	50,127,842 - 50,177,822 (+)	Ensembl
mRatBN7.2 Ensembl	13	47,576,211 - 47,626,110 (+)	Ensembl
Rnor_6.0 Ensembl	13	52,976,507 - 53,023,103 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000098466 ⟹ ENSRNOP00000082225

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	50,127,842 - 50,177,822 (+)	Ensembl
mRatBN7.2 Ensembl	13	47,589,221 - 47,626,110 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000105337 ⟹ ENSRNOP00000094546

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	13	50,140,934 - 50,173,550 (+)	Ensembl
mRatBN7.2 Ensembl	13	47,576,160 - 47,626,127 (+)	Ensembl

RefSeq Acc Id:

NM_001415800 ⟹ NP_001402729

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	50,127,842 - 50,177,822 (+)	NCBI
mRatBN7.2	13	47,576,129 - 47,626,112 (+)	NCBI

RefSeq Acc Id:

XM_006249854 ⟹ XP_006249916

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	50,127,847 - 50,173,550 (+)	NCBI
mRatBN7.2	13	47,576,142 - 47,626,112 (+)	NCBI
Rnor_6.0	13	52,976,505 - 53,026,750 (+)	NCBI
Rnor_5.0	13	58,030,695 - 58,080,585 (+)	NCBI

Sequence:

show sequence

GGGAGGTGGCGGTCCGGGTGGGAGGTGTGTGCGCGCGCGTGTGCCGCGCTGTAGGGAGCTGCGG
GTCTCACTGCCCGCTGTCAACGAGCTCAACACCTCCGCGCGATGGCTGGAGAAGAAGTATGGGA
CCAGCCCTGTGGGGCTGGCCGCGGGTGAGCCCCTCTGCTGCCTCCTGCGAGCATGTCACCTCCA
GCCTGCGAGGTCGCTTTCTCTAGCAGTGTCCGCGCCACCGCCTTCTGCTGCCGCAGCCGCTGCC
TAAAGCAGTGGCCCCCGGACCCCCGCCCCTGATCCGCGCCCAGACCCTGGTGCCAGAGGACCAT
GGCTGGTCAGGGCGACTGCTGCGTCAAAGTGGCCGTCAGGATCCGGCCCCAGCTATCAAAGGAG
AAGATTGAAGGCTGTCACATCTGTACCTCCGTTACCCCTGGGGAGCCCCAGGTCCTGCTGGGGA
AGGACAAGGCCTTCACCTATGACTTTGTCTTTGACCTGGACACCTGGCAAGAACAAATCTATTC
GACCTGCGTGAGCAAACTCATCGAAGGCTGCTTTGAGGGCTATAACGCCACAGTACTGGCCTAT
GGACAGACAGGGGCTGGGAAGACATACACTATGGGCACCGGCTTTGACACAGTGACGTCAGAAG
AGGAGCAGGGCATCATCCCAAGGGCCATTGCGCATCTCTTCAGGGGCATCGACGAACGCAAGCG
TCGGGCGCAGGAGCAGGGTGTGACTGGGCCTGAGTTCAAAGTCAGTGCCCAATTCCTGGAGCTC
TACAACGAAGAGATCCTTGACCTGTTTGACAGCACCCGCGACCCTGATGCCCGCCACCGCAGGT
CCAACATCAAGATCCACGAGGATGCCAATGGCGGCATCTACACCACAGGGGTCACTTCTCGCCT
CATCAACTCCCAGGAGGAGCTGATCCAGTGCCTGAAGCAGGGCGCCCTGTCACGAACCACGGCC
AGCACCCAGATGAACGTTCAAAGTTCCCGATCCCACGCCATCTTCACCATTCACCTGTGCCAGA
TGCGCGTGTGTGCCCAGCCTGACCTGGTGAATGAGACAGTGACTGGGCTTCCGGATGGAACGGC
CCCCACGGGCACTGAGTATGAGACGCTCACTGCTAAGTTCCACTTTGTGGACTTGGCGGGCTCA
GAGCGGCTGAAACGGACAGGGGCCACCGGTGAACGAGCCAAAGAGGGCATCTCCATCAACTGTG
GTCTGCTGGCCTTGGGCAATGTGATCAGTGCCTTGGGAGATCAGAGCAAGAAAGTCGTGCACGT
GCCCTACAGGGACTCCAAGCTCACTCGGCTGCTCCAGGACTCTCTTGGAGGCAACAGCCAGACC
ATCATGATCGCCTGTGTGAGCCCCTCAGATCGGGACTTCATGGAGACGCTCAACACTCTCAAAT
ATGCCAATCGGGCTCGAAACATCAAAAACAAAGTGGTAGTGAACCAGGACAAGACCAGCCAGCA
GATCAGCGCGCTGCGAGCCGAGATCGCACGCCTGCAGATGGAGTTGATGGAATACAAGGCGGGC
AAGCGAGTGATTGGGGAGGACGGTGCAGAGGGCTACAGCGACCTGTTCCGGGAGAACGCCATGC
TACAGAAGGAGAACGGAGCACTGAGACTCCGAGTGAAGGCCATGCAGGAAGCCATTGATGCCAT
CAACAACCGGGTCACACAACTCATGAGTCAGGAGGCTAACCTGCTTCTGGCCAAGGCTGGGGAT
GGCAACGAGGCCATTGGCGCTCTGATCCAGAACTACATCCGGGAGATTGAGGAGCTTCGCACGA
AGCTTCTGGAGAGTGAGGCTATGAATGAGTCCCTCCGAAGGAGCCTCTCCCGGGCTTCCGCTCG
GAACCCCTACTCCCTGGGAGCATCTCCAGCAGGTCCAGCCTTTGGGGGCAGCCCGGCCAGCTCC
ATGGAAGATGCTTCTGAAGTGATCCGCAGGGCCAAGCAAGACCTGGAGCGGCTGAAAAAGAAAG
AGGTCAGGCAGCGGAGGAAGAGCAGCCCGGAGAAAGAAGCCTTCAAAAAGAGGGCAAAACTCCA
GCAGGAAAACAGTGAGGAGACGGATGAGAACGAGGCTGAGGAGGAGGAAGAAGAACGAGATGAG
AGTGGCTGTGAGGAGGAGGAGGATGAAGACTCGGGCAGTGAAGAGAGCCTGGTGGACTCGGACT
CCGACCCTGAGGAAAAGGAAGTCAACTTCCAGGCAGACCTGGCGGACCTGACCTGTGAGATTGA
GATCAAGCAGAAGCTGATCGACGAGCTGGAGAACAGCCAGCGGCGGCTACAGACGCTCAAGCAC
CAGTACGAGGAGAAGCTCATTCTGCTGCAGAACAAGATCCGAGACACACAGCTGGAGCGCGACC
GCGTGCTGCAGAACCTCAGTACTATGGAGTGCTACACGGAGGAGAAGGCCAACAAGATAAAGGC
AGATTATGAGAAGAGGCTTCGGGAGATGAACCGGGACCTGCAGAAGCTACAGGCTGCTCAAAAG
GAGCATGCCAGGCTGCTCAAGAACCAGTCTCGCTATGAGAGGGAGCTGAAGAAGCTGCAAACGG
AGGTAGCCGAAATGAAGAAGGCCAAGGTAGCCCTCATGAAGCAAATGCGTGAGGAACAGCAGCG
GCGGCGACTGGTGGAGACCAAGAGGAACCGGGAGATTGCTCAGCTCAAGAAGGAGCAACGGAGG
CAGGAGTTCCAGATACGGGCCCTGGAATCTCAGAAGCGCCAGCAGGAAATAGTTCTGAGGAGGA
AAACCCAGGAGGTTTCCGCACTGAGGCGCTTAGCAAAGCCCATGTCTGAGAGAGTGGCCGGACG
TGTAGGATTGAAGCCCCCCAATATGGATTCTGGGGCTGAGGTGTCTGCCAGCACTACCTCATCT
GAGGCTGAATCCGGAGCTCGCTCTGTCTCCAGCATAGTGCGTCAGTGGAACCGAAAAATCAACC
ACTTCCTGGGGGACCACCCGACAGCCACTGTCAATGGCGCCCGCCCGGCCAGGAAAAAGTTCCA
AAAGAAGGGAGCCAGCCAAAGCTTCAGTAAGGCCGCGAGACTCAAGTGGCAGTCCCTGGAACGG
AGGATCATTGACATTGTCATGCAGAGAATGACCATCGTCAACCTGGAGGCTGATATGGAGCGTC
TCATAAAGAAAAGGGAGGAGCTCTTCCTCCTACAGGAGGCACTGCGGAGGAAGCGGGAGCGCCT
GCAAGCTGAGAGCCCGGAGGAGGAGAAGGGACTACAGGAACTGGCTGAGGAGATCGAAGTGTTG
GCAGCCAATATTGACTACATCAATGACAGCATCACTGACTGCCAAGCCACTATCATGCAGCTGG
AGGAAACCAAGGAGGAGCTGGATTCGACAGACACATCGGTGGTCATTAGTTCCTGCTCTCTGGC
TGAAGCCCGCCTACTGCTAGACAACTTCCTCAAGGCATCCATTGACAAGGGACTTCAAGTAGCA
CAGAAGGAGGCCCAGATCCGGCTGCTGGAAGGACGCCTCAGACAAACAGACATGACAGGCTCTT
CCCAGAACCACCTGCTCCTAGATGCTTTGCGTGAGAAGGCTGAGGCACACCCCGAGCTGCAGGC
CCTCATCTACAATGTGCAACATGAGAATGGCTATGCCAGCACAGATGAGGAAGTTTCAGAGTTC
TCTGAGGGGAGCTTTTCCCAGTCATTCACCATGAAAGGCTCCACCAGCCATGATGACTTCAAGT
TCAAGGGTGAGCCCAAGCTGTCCGCACAAATGAAGGCCGTGTCTGCGGAGTGCCTAGGACCCCC
ACTGGACAGCTCCACCAAGAACATCACCAAGTCCCTGGCCTCCCTCGTTGAGATCAAAGAGGAT
GGGGTGGGCTTCTCTATCCGGGACCCATACTACCGAGACAAGGTCTCACGCACCGTCAGCCTGC
CCACCCGGGGCAGCACTTTCCCTCGGCAGTCTCGAGGTGCCACGGATACATCCCCTCTGACCCG
CAGGAAGTCTTATGACCGGGGACAGCCCATCAGATCAACAGACATAGGATTCACACCTCCCTCA
TCACCTCCCACTCGGCCCCGCAACGACCGCAATGTCTTTTCTCGCCTCACCAGCAATCAGAGCC
AGGGCTCGGCACTGGACAAAGGCATCATCACCCCCATTGGCGGAGCAAAGGGAGCGCGGACGGC
CCCGTTGCAGTGTGTCTCCATGGCCGAGGGCCACACCAAGCCCATCCTCTGCCTGGATGCCACC
GATGAATTACTTTTCACTGGATCCAAAGACCGTAGCTGCAAGATGTGGAACCTGGTAACAGGGC
AGGAGATTGCAGCTCTCAAGGGCCACCCCAACAACGTGGTTTCTATCAAATACTGCAGCCACTC
AGGGCTGGTGTTCTCTGTGTCCAGCTCCTACGTCAAGGTGTGGGACATCCGGGACTCAGCCAAG
TGCATCCGGACGCTCACGTCCTCAGGCCAGGTGATCTCAGGAGATGCTTGCATGGCCACATCCA
CCCGTGCCATCACCAGTTCCCAGGGAGAGCATCAGATTAACCAGATGGCCCTCAGCCCCTCGGG
CACCATGTTATATGTTGCCTCCGGCAACGCTGTCCGCATCTGGGAGCTCAACAGGTTCCAGCCC
ATTGGCAAACTGACCGGCCACATTGGCCCAGTGATGTGCCTGACAGTCACCCAGACTTCAAACC
AGCATGACCTCGTGGTGACTGGCTCCAAGGACCACTATGTGAAGATGTTCCAGCTGGGCGACTG
TGTAACGGGCACCATTGGCCCAACCCACAACTTTGAGCCCCCTCACTATGACGGTATCGAATGC
CTGGCCATCCAAGGAGATATACTGTTCAGTGGTTCCAGAGACAATGGCATCAAGAAGTGGGACC
TGGATCAGCAGGAGCTCATTCAGCAAATCCCCAACGCTCACAAGGACTGGGTGTGCGCCCTGGC
CTTTGTACCCGGCCGGCCCATGTTACTGAGCGCCTGCCGGGCAGGCTTCATCAAGGTCTGGAAT
GTGGACAACTTCACGCCCATTGGTGAGATCAAGGGCCATGACAGCCCCATCAATGCCATCTGCA
CCAACAGCAAGCACATCTTCACGGCCTCCAGTGACTGCCGGGTAAAGCTGTGGAATTACGTCCC
TGGACTCACCCCCTGCCTTCCTCGACGAGTCCTGGCCATAAAGGGCCGCGCCACCACCCTGCCC
TGACCCTCCCCTTCCTCTCTGTCTTCCCCTCTTGCCTTTTCCTGTCTTTCCCCACCTCGATCTG
AGCTGCTTCTTCACGTGACCTGACAGTGAAGTTCTGGAGCATGCGGCGGCTACCAGCAGCCCAC
CCCTGAAGTTAGGACTGAAGGTGGCCAGACCCTCAGACCCAGCATGGAGAGGAAGCTTGGGGCC
GACCTTACCAGACCAGCCAGCCAGGTTCACCGAGGACAGAGGGTGTGGCCCTTCTCTTGCTCTG
CTTCCCCCACCACCCCCTCTGCCCCTCCCCTGCCTCCCGAGAAAGTGGAGGCCGAGGAGGGAGA
CAAGCTGTGAAGCCAAAGGGCATGATTCATTCCCCCTGACACCCCGCCTGTCCCCTGCCTTTTC
CTCAGCTGGCCACATTGTCTCCTGCTGAGCCAGCCCTGCCCCTCTCCCAGGCCCTCAGCCTAGG
GTAAGACTGAAGGAGAAGCAGGGAGAAGCCCCGTCTATCTGCCAGTAAGCTAGCCCCTTCTGGG
TCTCCAAGCCCCACCCCCGGAGCCACTGCACCTGCCTCTGAGCCCACCCAGGTAGTTCTCAGGT
AACCATGGAGACCAGATGTAAGCAGCGGAGTCCTGCAGCTGACCCGAAACCCTACAGCCACCCA
CAGCCAATCCCGGTGGGGCCCAGTCCTTCCTCGAGGTTCCCTTCGGCTGGGACCTCCGTGGAGC
TGCTTAAACAGTTCCTTTGGGGAGAAGGTCAGCAATACTGCAGTCATTTAATGTATTGATTTTT
TATTTTTATGTTTTGCTGTTGCCTCCTGGAAACTGACTTGAAGTTTCTTCCCATTCGTCCCTCC
GCTCCTGGCGGGGGGTCTTCTCTCTGGCGCTCCAGGGCCCTCCCTCTGATGACTCTCAGATGAG
GGAAAGTCCTCTCCACTGACCATTGTTCCAACCCTGCCCATCCCGGCATACCTTCTAGGATAGA
CCAGGTCTCTAGGCCGCCTGATGCCACAGTGCCTTTCTCCATCCTGAGGCCTGGCATCACGCTG
GGCAGCCTTATGCTAGCCATGCCCGCAGTCCACATGTGTCTTCTCCTCCAGGGCCTTGTGCCCA
CAGCCCCTGGTCATAGCGTCCACCCCAACAGCCCAGGACCAGGGAGCCCACGCTCCCAAGAGTC
CTGGGATGTCGCTTGGTGGACCTCCACTATGTAGGTGTGGGTAGTAAGGATACCACATCCTTTG
CCTAACCCCCAGCCAATTATGTCGTCCTCTCCCTCCCCACAAGGGGACAGGGAGCATCCTCAGC
TTCTTTTCCTTTAGTTGTCCCAGAAACTGGTTTTGAAGCCTTAAAACCAGCCTGGGCCAAATGC
CCTCCCTTTTCAATTAGCACGAGGAGGCACGGACCCCTTGCTTCTCCCCTTAGTGCTGTGAACG
CAGCAGCTGTTGGGATGAGGCGAAGTCAGTGTCTAGCGCCCCCTACCGGATCGACTCTGAATTC
ATAGGACTGGGCCGTGAGAGGGGCCAGCTCCATTCCTCACCCCTGGCTTCCCCTGCCCTTAAAC
TGGTCCACGCTTATTCTAATGCTTCACTGGTCTTGTGCATCCTGGTCTCATTCTGGGATCCCCG
GCTCCATTGAAGACGCGGTGACTTGCAGACTTTGGAGAGCTAGCGTACCACCTCTGCACTTAGC
CCTTCTCCCTCAAGTAACACTGGTGCCTGTTCATGAGGCCCTGGGATGAGAGAGTTAGGAGCTG
ATAAGACCAGACCCTCTCTGGACCATGCCAGAGCTGTGTCTGAGGCAGAAACTAAGAGAAGTGT
CCCGCTTATCGGTGGCTACTGCCAGACACGGTGTTAAGTCTGGGATATTTAGAACGACCTACCT
GGAAAGCAGGTCATCTGGAACCTGGACCGCCTGTCTGCAATGGCCAGAGATCCTCCTCCCTCCG
CTCATTCTGGGAGTGTTAAGGAACGTCCTTAGCACACAGAAGTGACCACATCTTCTCCTTTATC
CCTCTCCACCTGAATGGACAGCCTGGACCTTACACCCTGTGAGAAAACCCAGAACCCGTCTGCA
TGACTGTTTACAAACTACAGAAACACGTGAGACTCGTGTCCCGACCCCACAGGCTGGGCCGCCC
CAATCCCCCGATGCCTGTACTGTATAGCTGCAAGGCTAGTTCTTGCACAAAGTGTGTGTGGTCT
TACAGCCCCCCGAGAGGTGCTCACTGGCATTACCCCCTCTGCCATTTCTGATGGGTCACTACCT
CATGGCGGGGCTGCTGTGCTGTCCCAGCGAGTGTCATTGACTAAACTTGAAATACTTCGGAGCT
CTGAGCTCATCGTCACCGAGCCCTTCTGAGCTGTGTTCTGGGGACGTTGGAGTCCCTGACCACC
CACCCTTTCCGGGATGTCCAAGGTACAGGGGCAGGCTCCCCAGCTCCACTCATTGCACAAGCAT
CCTACCTGTTGGAAGCACAAACTGGTTGTGATTTGAGCACAGTAGCAGGTCTCTGGGTAGACAG
CATGAGCAAACTTGGGCCCAGGAGCTCTTTCCCAGGTGGGCTTCGTCTTAGGCTAGACGAGAGC
TGCCCGTGTCTGTAGCTGACTCACCCTGTATTTCTGGGAATTATTACTTAACTTCTTGTGCCCA
ACTTAGGACTTGAGGCCCAGGCCACCTCTGTATGCTGTGGGGGTCTTCCCTAGATCCCCACACC
CAAAGCCTTTAACAACCAGAGTATAGCTGGTACCCCACCATACTGAGCCTGAAGAACTTGGACC
CAGACTCCCATCTCTTGAGCTAACCCCAACATCCATGCTTACAAAACTGATAAGCTTGCATCTG
GATGGAAAGTGTCTACTGTCCCCACTCTCTTTGGCCTTTCCTGTGCACAGTCCTGGGCCAGGAC
CCATTCCAGTATTAACCAGTTCAGTGTTTGGTCTTGTTGGAGAGACTTGACAGCAGCCGGCTCA
TGGAGAGGCTGCCTGGAGCAGCCTTTGAAGACTGCAGAGGAGAGAGAGAGAACTCAAAGAGTAA
GAGCCTGACCCAGCACAGCCCTTGATGTGGTCAGATCGCCACCACAGCTACTTGAAAAGGGACA
GCCGAGGGTCTGGGAGTAGCCTCCCACCGCTGCCCCAGCTGCTGGCTTGGGATCGTCTTAGGCT
GTGTGGCTTGGGCAAAGCACAGTTTAAAGCACAAAACCACGTGGGGAAGATGCTGCCTTGCTGG
GGGATTCTCCTGCTTCCCTTTGTGTTGATAGTGCAGGCAGGGAGCTGCTGGGAAGGCAGGACAT
CTGCCCTGTCCTTGGAGGCCTCCCCTGGAGTGTGGCCAGGTGCAGCAGGCACACCCCTTTGGCT
GTGCCTCTTATGTTTGTGTGGGCAGGACCTGCCCTTCGGAGAGCAGTGAATTCCTTCCCACCAT
GTGGCCCAAACCTGCCACATCTGTCCCTTTGTCCTTTCAAACAAGAAACCGCTGGCTGCTCCCT
TTGATGAGCACAGTGGCCAGTGCCACCACAGACCTTCCTGAGCCCAACCTGTCACCTCCCGACT
CCTAGGTCTTCACTGCTCCTTGTGTGCAAGAAGAGAATCTGCAGGGAAAGTTCGGTTTCTTTGA
CATCACTGTTCTGTCCCCCGTGTGTCCCCCCCCCCTTCATCTCCAGCACCCAGCTGGCCTCCCT
TTGCCCCTCCCTTTCACCTTCAATCCTACATCCGGAAGGCTCTGTCAGAAAGTGGGAAGTCAGA
AAAGACCACTGATGTCTCAGTGCCCTGCCCCGCCCTGCCATGCCACCAGCTCTTAGAGCGGTTG
CCCCTCCCTGGGCTGCAGGGTCTCTTTTGGCTCATGCGCTCTCCCGTGACGTGGTAGCACAAGG
TGTGTATATGTTTTGTACCTCTGCTGGCGACTGTACATAGTGTATGAAAGTTATTTAAGCCTCA
GGCTGTACATTTCTGTTCTGGAATCGGATGTGTGTGTTCTAAGAGCTTGTCATAAATAAAACCA
TTGTTCACAGA

hide sequence

RefSeq Acc Id:

XM_006249856 ⟹ XP_006249918

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	50,127,847 - 50,177,822 (+)	NCBI
mRatBN7.2	13	47,576,142 - 47,626,112 (+)	NCBI
Rnor_6.0	13	52,976,505 - 53,026,750 (+)	NCBI
Rnor_5.0	13	58,030,695 - 58,080,585 (+)	NCBI

Sequence:

show sequence

GGGAGGTGGCGGTCCGGGTGGGAGGTGTGTGCGCGCGCGTGTGCCGCGCTGTAGGGAGCTGCGG
GTCTCACTGCCCGCTGTCAACGAGCTCAACACCTCCGCGCGATGGCTGGAGAAGAAGTATGGGA
CCAGCCCTGTGGGGCTGGCCGCGGGTGAGCCCCTCTGCTGCCTCCTGCGAGCATGTCACCTCCA
GCCTGCGAGGTCGCTTTCTCTAGCAGTGTCCGCGCCACCGCCTTCTGCTGCCGCAGCCGCTGCC
TAAAGCAGTGGCCCCCGGACCCCCGCCCCTGATCCGCGCCCAGACCCTGGTGCCAGAGGACCAT
GGCTGGTCAGGGCGACTGCTGCGTCAAAGTGGCCGTCAGGATCCGGCCCCAGCTATCAAAGGAG
AAGATTGAAGGCTGTCACATCTGTACCTCCGTTACCCCTGGGGAGCCCCAGGTCCTGCTGGGGA
AGGACAAGGCCTTCACCTATGACTTTGTCTTTGACCTGGACACCTGGCAAGAACAAATCTATTC
GACCTGCGTGAGCAAACTCATCGAAGGCTGCTTTGAGGGCTATAACGCCACAGTACTGGCCTAT
GGACAGACAGGGGCTGGGAAGACATACACTATGGGCACCGGCTTTGACACAGTGACGTCAGAAG
AGGAGCAGGGCATCATCCCAAGGGCCATTGCGCATCTCTTCAGGGGCATCGACGAACGCAAGCG
TCGGGCGCAGGAGCAGGGTGTGACTGGGCCTGAGTTCAAAGTCAGTGCCCAATTCCTGGAGCTC
TACAACGAAGAGATCCTTGACCTGTTTGACAGCACCCGCGACCCTGATGCCCGCCACCGCAGGT
CCAACATCAAGATCCACGAGGATGCCAATGGCGGCATCTACACCACAGGGGTCACTTCTCGCCT
CATCAACTCCCAGGAGGAGCTGATCCAGTGCCTGAAGCAGGGCGCCCTGTCACGAACCACGGCC
AGCACCCAGATGAACGTTCAAAGTTCCCGATCCCACGCCATCTTCACCATTCACCTGTGCCAGA
TGCGCGTGTGTGCCCAGCCTGACCTGGTGAATGAGACAGTGACTGGGCTTCCGGATGGAACGGC
CCCCACGGGCACTGAGTATGAGACGCTCACTGCTAAGTTCCACTTTGTGGACTTGGCGGGCTCA
GAGCGGCTGAAACGGACAGGGGCCACCGGTGAACGAGCCAAAGAGGGCATCTCCATCAACTGTG
GTCTGCTGGCCTTGGGCAATGTGATCAGTGCCTTGGGAGATCAGAGCAAGAAAGTCGTGCACGT
GCCCTACAGGGACTCCAAGCTCACTCGGCTGCTCCAGGACTCTCTTGGAGGCAACAGCCAGACC
ATCATGATCGCCTGTGTGAGCCCCTCAGATCGGGACTTCATGGAGACGCTCAACACTCTCAAAT
ATGCCAATCGGGCTCGAAACATCAAAAACAAAGTGGTAGTGAACCAGGACAAGACCAGCCAGCA
GATCAGCGCGCTGCGAGCCGAGATCGCACGCCTGCAGATGGAGTTGATGGAATACAAGGCGGGC
AAGCGAGTGATTGGGGAGGACGGTGCAGAGGGCTACAGCGACCTGTTCCGGGAGAACGCCATGC
TACAGAAGGAGAACGGAGCACTGAGACTCCGAGTGAAGGCCATGCAGGAAGCCATTGATGCCAT
CAACAACCGGGTCACACAACTCATGAGTCAGGAGGCTAACCTGCTTCTGGCCAAGGCTGGGGAT
GGCAACGAGGCCATTGGCGCTCTGATCCAGAACTACATCCGGGAGATTGAGGAGCTTCGCACGA
AGCTTCTGGAGAGTGAGGCTATGAATGAGTCCCTCCGAAGGAGCCTCTCCCGGGCTTCCGCTCG
GAACCCCTACTCCCTGGGAGCATCTCCAGCAGGTCCAGCCTTTGGGGGCAGCCCGGCCAGCTCC
ATGGAAGATGCTTCTGAAGTGATCCGCAGGGCCAAGCAAGACCTGGAGCGGCTGAAAAAGAAAG
AGGTCAGGCAGCGGAGGAAGAGCAGCCCGGAGAAAGAAGCCTTCAAAAAGAGGGCAAAACTCCA
GCAGGAAAACAGTGAGGAGACGGATGAGAACGAGGCTGAGGAGGAGGAAGAAGAACGAGATGAG
AGTGGCTGTGAGGAGGAGGAGGATGAAGACTCGGGCAGTGAAGAGAGCCTGGTGGACTCGGACT
CCGACCCTGAGGAAAAGGAAGTCAACTTCCAGGCAGACCTGGCGGACCTGACCTGTGAGATTGA
GATCAAGCAGAAGCTGATCGACGAGCTGGAGAACAGCCAGCGGCGGCTACAGACGCTCAAGCAC
CAGTACGAGGAGAAGCTCATTCTGCTGCAGAACAAGATCCGAGACACACAGCTGGAGCGCGACC
GCGTGCTGCAGAACCTCAGTACTATGGAGTGCTACACGGAGGAGAAGGCCAACAAGATAAAGGC
AGATTATGAGAAGAGGCTTCGGGAGATGAACCGGGACCTGCAGAAGCTACAGGCTGCTCAAAAG
GAGCATGCCAGGCTGCTCAAGAACCAGTCTCGCTATGAGAGGGAGCTGAAGAAGCTGCAAACGG
AGGTAGCCGAAATGAAGAAGGCCAAGGTAGCCCTCATGAAGCAAATGCGTGAGGAACAGCAGCG
GCGGCGACTGGTGGAGACCAAGAGGAACCGGGAGATTGCTCAGCTCAAGAAGGAGCAACGGAGG
CAGGAGTTCCAGATACGGGCCCTGGAATCTCAGAAGCGCCAGCAGGAAATAGTTCTGAGGAGGA
AAACCCAGGAGGTTTCCGCACTGAGGCGCTTAGCAAAGCCCATGTCTGAGAGAGTGGCCGGACG
TGTAGGATTGAAGCCCCCCAATATGGATTCTGGGGCTGAGGTGTCTGCCAGCACTACCTCATCT
GAGGCTGAATCCGGAGCTCGCTCTGTCTCCAGCATAGTGCGTCAGTGGAACCGAAAAATCAACC
ACTTCCTGGGGGACCACCCGACAGCCACTGTCAATGGCGCCCGCCCGGCCAGGAAAAAGTTCCA
AAAGAAGGGAGCCAGCCAAAGCTTCAGTAAGGCCGCGAGACTCAAGTGGCAGTCCCTGGAACGG
AGGATCATTGACATTGTCATGCAGAGAATGACCATCGTCAACCTGGAGGCTGATATGGAGCGTC
TCATAAAGAAAAGGGAGGAGCTCTTCCTCCTACAGGAGGCACTGCGGAGGAAGCGGGAGCGCCT
GCAAGCTGAGAGCCCGGAGGAGGAGAAGGGACTACAGGAACTGGCTGAGGAGATCGAAGTGTTG
GCAGCCAATATTGACTACATCAATGACAGCATCACTGACTGCCAAGCCACTATCATGCAGCTGG
AGGAAACCAAGGAGGAGCTGGATTCGACAGACACATCGGTGGTCATTAGTTCCTGCTCTCTGGC
TGAAGCCCGCCTACTGCTAGACAACTTCCTCAAGGCATCCATTGACAAGGGACTTCAAGTAGCA
CAGAAGGAGGCCCAGATCCGGCTGCTGGAAGGACGCCTCAGACAAACAGACATGACAGGCTCTT
CCCAGAACCACCTGCTCCTAGATGCTTTGCGTGAGAAGGCTGAGGCACACCCCGAGCTGCAGGC
CCTCATCTACAATGTGCAACATGAGAATGGCTATGCCAGCACAGATGAGGAAGTTTCAGAGTTC
TCTGAGGGGAGCTTTTCCCAGTCATTCACCATGAAAGGCTCCACCAGCCATGATGACTTCAAGT
TCAAGGGTGAGCCCAAGCTGTCCGCACAAATGAAGGCCGTGTCTGCGGAGTGCCTAGGACCCCC
ACTGGACAGCTCCACCAAGAACATCACCAAGTCCCTGGCCTCCCTCGTTGAGATCAAAGAGGAT
GGGGTGGGCTTCTCTATCCGGGACCCATACTACCGAGACAAGGTCTCACGCACCGTCAGCCTGC
CCACCCGGGGCAGCACTTTCCCTCGGCAGTCTCGAGGTGCCACGGATACATCCCCTCTGACCCG
CAGGAAGTCTTATGACCGGGGACAGCCCATCAGATCAACAGACATAGGATTCACACCTCCCTCA
TCACCTCCCACTCGGCCCCGCAACGACCGCAATGTCTTTTCTCGCCTCACCAGCAATCAGAGCC
AGGGCTCGGCACTGGACAAGTCTGATGACAGCGACTCCTCTTTGTCGGAGGTCCTGAGAGGCAT
CATCACCCCCATTGGCGGAGCAAAGGGAGCGCGGACGGCCCCGTTGCAGTGTGTCTCCATGGCC
GAGGGCCACACCAAGCCCATCCTCTGCCTGGATGCCACCGATGAATTACTTTTCACTGGATCCA
AAGACCGTAGCTGCAAGATGTGGAACCTGGTAACAGGGCAGGAGATTGCAGCTCTCAAGGGCCA
CCCCAACAACGTGGTTTCTATCAAATACTGCAGCCACTCAGGGCTGGTGTTCTCTGTGTCCAGC
TCCTACGTCAAGGTGTGGGACATCCGGGACTCAGCCAAGTGCATCCGGACGCTCACGTCCTCAG
GCCAGGTGATCTCAGGAGATGCTTGCATGGCCACATCCACCCGTGCCATCACCAGTTCCCAGGG
AGAGCATCAGATTAACCAGATGGCCCTCAGCCCCTCGGGCACCATGTTATATGTTGCCTCCGGC
AACGCTGTCCGCATCTGGGAGCTCAACAGGTTCCAGCCCATTGGCAAACTGACCGGCCACATTG
GCCCAGTGATGTGCCTGACAGTCACCCAGACTTCAAACCAGCATGACCTCGTGGTGACTGGCTC
CAAGGACCACTATGTGAAGATGTTCCAGCTGGGCGACTGTGTAACGGGCACCATTGGCCCAACC
CACAACTTTGAGCCCCCTCACTATGACGGTATCGAATGCCTGGCCATCCAAGGAGATATACTGT
TCAGTGGTTCCAGAGACAATGGCATCAAGAAGTGGGACCTGGATCAGCAGGAGCTCATTCAGCA
AATCCCCAACGCTCACAAGGACTGGGTGTGCGCCCTGGCCTTTGTACCCGGCCGGCCCATGTTA
CTGAGCGCCTGCCGGGCAGGCTTCATCAAGGTCTGGAATGTGGACAACTTCACGCCCATTGGTG
AGATCAAGGGCCATGACAGCCCCATCAATGCCATCTGCACCAACAGCAAGCACATCTTCACGGC
CTCCAGTGACCTGACAGTGAAGTTCTGGAGCATGCGGCGGCTACCAGCAGCCCACCCCTGAAGT
TAGGACTGAAGGTGGCCAGACCCTCAGACCCAGCATGGAGAGGAAGCTTGGGGCCGACCTTACC
AGACCAGCCAGCCAGGTTCACCGAGGACAGAGGGTGTGGCCCTTCTCTTGCTCTGCTTCCCCCA
CCACCCCCTCTGCCCCTCCCCTGCCTCCCGAGAAAGTGGAGGCCGAGGAGGGAGACAAGCTGTG
AAGCCAAAGGGCATGATTCATTCCCCCTGACACCCCGCCTGTCCCCTGCCTTTTCCTCAGCTGG
CCACATTGTCTCCTGCTGAGCCAGCCCTGCCCCTCTCCCAGGCCCTCAGCCTAGGGTAAGACTG
AAGGAGAAGCAGGGAGAAGCCCCGTCTATCTGCCAGTAAGCTAGCCCCTTCTGGGTCTCCAAGC
CCCACCCCCGGAGCCACTGCACCTGCCTCTGAGCCCACCCAGGTAGTTCTCAGGTAACCATGGA
GACCAGATGTAAGCAGCGGAGTCCTGCAGCTGACCCGAAACCCTACAGCCACCCACAGCCAATC
CCGGTGGGGCCCAGTCCTTCCTCGAGGTTCCCTTCGGCTGGGACCTCCGTGGAGCTGCTTAAAC
AGTTCCTTTGGGGAGAAGGTCAGCAATACTGCAGTCATTTAATGTATTGATTTTTTATTTTTAT
GTTTTGCTGTTGCCTCCTGGAAACTGACTTGAAGTTTCTTCCCATTCGTCCCTCCGCTCCTGGC
GGGGGGTCTTCTCTCTGGCGCTCCAGGGCCCTCCCTCTGATGACTCTCAGATGAGGGAAAGTCC
TCTCCACTGACCATTGTTCCAACCCTGCCCATCCCGGCATACCTTCTAGGATAGACCAGGTCTC
TAGGCCGCCTGATGCCACAGTGCCTTTCTCCATCCTGAGGCCTGGCATCACGCTGGGCAGCCTT
ATGCTAGCCATGCCCGCAGTCCACATGTGTCTTCTCCTCCAGGGCCTTGTGCCCACAGCCCCTG
GTCATAGCGTCCACCCCAACAGCCCAGGACCAGGGAGCCCACGCTCCCAAGAGTCCTGGGATGT
CGCTTGGTGGACCTCCACTATGTAGGTGTGGGTAGTAAGGATACCACATCCTTTGCCTAACCCC
CAGCCAATTATGTCGTCCTCTCCCTCCCCACAAGGGGACAGGGAGCATCCTCAGCTTCTTTTCC
TTTAGTTGTCCCAGAAACTGGTTTTGAAGCCTTAAAACCAGCCTGGGCCAAATGCCCTCCCTTT
TCAATTAGCACGAGGAGGCACGGACCCCTTGCTTCTCCCCTTAGTGCTGTGAACGCAGCAGCTG
TTGGGATGAGGCGAAGTCAGTGTCTAGCGCCCCCTACCGGATCGACTCTGAATTCATAGGACTG
GGCCGTGAGAGGGGCCAGCTCCATTCCTCACCCCTGGCTTCCCCTGCCCTTAAACTGGTCCACG
CTTATTCTAATGCTTCACTGGTCTTGTGCATCCTGGTCTCATTCTGGGATCCCCGGCTCCATTG
AAGACGCGGTGACTTGCAGACTTTGGAGAGCTAGCGTACCACCTCTGCACTTAGCCCTTCTCCC
TCAAGTAACACTGGTGCCTGTTCATGAGGCCCTGGGATGAGAGAGTTAGGAGCTGATAAGACCA
GACCCTCTCTGGACCATGCCAGAGCTGTGTCTGAGGCAGAAACTAAGAGAAGTGTCCCGCTTAT
CGGTGGCTACTGCCAGACACGGTGTTAAGTCTGGGATATTTAGAACGACCTACCTGGAAAGCAG
GTCATCTGGAACCTGGACCGCCTGTCTGCAATGGCCAGAGATCCTCCTCCCTCCGCTCATTCTG
GGAGTGTTAAGGAACGTCCTTAGCACACAGAAGTGACCACATCTTCTCCTTTATCCCTCTCCAC
CTGAATGGACAGCCTGGACCTTACACCCTGTGAGAAAACCCAGAACCCGTCTGCATGACTGTTT
ACAAACTACAGAAACACGTGAGACTCGTGTCCCGACCCCACAGGCTGGGCCGCCCCAATCCCCC
GATGCCTGTACTGTATAGCTGCAAGGCTAGTTCTTGCACAAAGTGTGTGTGGTCTTACAGCCCC
CCGAGAGGTGCTCACTGGCATTACCCCCTCTGCCATTTCTGATGGGTCACTACCTCATGGCGGG
GCTGCTGTGCTGTCCCAGCGAGTGTCATTGACTAAACTTGAAATACTTCGGAGCTCTGAGCTCA
TCGTCACCGAGCCCTTCTGAGCTGTGTTCTGGGGACGTTGGAGTCCCTGACCACCCACCCTTTC
CGGGATGTCCAAGGTACAGGGGCAGGCTCCCCAGCTCCACTCATTGCACAAGCATCCTACCTGT
TGGAAGCACAAACTGGTTGTGATTTGAGCACAGTAGCAGGTCTCTGGGTAGACAGCATGAGCAA
ACTTGGGCCCAGGAGCTCTTTCCCAGGTGGGCTTCGTCTTAGGCTAGACGAGAGCTGCCCGTGT
CTGTAGCTGACTCACCCTGTATTTCTGGGAATTATTACTTAACTTCTTGTGCCCAACTTAGGAC
TTGAGGCCCAGGCCACCTCTGTATGCTGTGGGGGTCTTCCCTAGATCCCCACACCCAAAGCCTT
TAACAACCAGAGTATAGCTGGTACCCCACCATACTGAGCCTGAAGAACTTGGACCCAGACTCCC
ATCTCTTGAGCTAACCCCAACATCCATGCTTACAAAACTGATAAGCTTGCATCTGGATGGAAAG
TGTCTACTGTCCCCACTCTCTTTGGCCTTTCCTGTGCACAGTCCTGGGCCAGGACCCATTCCAG
TATTAACCAGTTCAGTGTTTGGTCTTGTTGGAGAGACTTGACAGCAGCCGGCTCATGGAGAGGC
TGCCTGGAGCAGCCTTTGAAGACTGCAGAGGAGAGAGAGAGAACTCAAAGAGTAAGAGCCTGAC
CCAGCACAGCCCTTGATGTGGTCAGATCGCCACCACAGCTACTTGAAAAGGGACAGCCGAGGGT
CTGGGAGTAGCCTCCCACCGCTGCCCCAGCTGCTGGCTTGGGATCGTCTTAGGCTGTGTGGCTT
GGGCAAAGCACAGTTTAAAGCACAAAACCACGTGGGGAAGATGCTGCCTTGCTGGGGGATTCTC
CTGCTTCCCTTTGTGTTGATAGTGCAGGCAGGGAGCTGCTGGGAAGGCAGGACATCTGCCCTGT
CCTTGGAGGCCTCCCCTGGAGTGTGGCCAGGTGCAGCAGGCACACCCCTTTGGCTGTGCCTCTT
ATGTTTGTGTGGGCAGGACCTGCCCTTCGGAGAGCAGTGAATTCCTTCCCACCATGTGGCCCAA
ACCTGCCACATCTGTCCCTTTGTCCTTTCAAACAAGAAACCGCTGGCTGCTCCCTTTGATGAGC
ACAGTGGCCAGTGCCACCACAGACCTTCCTGAGCCCAACCTGTCACCTCCCGACTCCTAGGTCT
TCACTGCTCCTTGTGTGCAAGAAGAGAATCTGCAGGGAAAGTTCGGTTTCTTTGACATCACTGT
TCTGTCCCCCGTGTGTCCCCCCCCCCTTCATCTCCAGCACCCAGCTGGCCTCCCTTTGCCCCTC
CCTTTCACCTTCAATCCTACATCCGGAAGGCTCTGTCAGAAAGTGGGAAGTCAGAAAAGACCAC
TGATGTCTCAGTGCCCTGCCCCGCCCTGCCATGCCACCAGCTCTTAGAGCGGTTGCCCCTCCCT
GGGCTGCAGGGTCTCTTTTGGCTCATGCGCTCTCCCGTGACGTGGTAGCACAAGGTGTGTATAT
GTTTTGTACCTCTGCTGGCGACTGTACATAGTGTATGAAAGTTATTTAAGCCTCAGGCTGTACA
TTTCTGTTCTGGAATCGGATGTGTGTGTTCTAAGAGCTTGTCATAAATAAAACCATTGTTCACA
GA

hide sequence

RefSeq Acc Id:

XM_006249857 ⟹ XP_006249919

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	50,127,847 - 50,177,822 (+)	NCBI
mRatBN7.2	13	47,576,142 - 47,626,112 (+)	NCBI
Rnor_6.0	13	52,976,505 - 53,026,750 (+)	NCBI
Rnor_5.0	13	58,030,695 - 58,080,585 (+)	NCBI

Sequence:

show sequence

GGGAGGTGGCGGTCCGGGTGGGAGGTGTGTGCGCGCGCGTGTGCCGCGCTGTAGGGAGCTGCGG
GTCTCACTGCCCGCTGTCAACGAGCTCAACACCTCCGCGCGATGGCTGGAGAAGAAGTATGGGA
CCAGCCCTGTGGGGCTGGCCGCGGGTGAGCCCCTCTGCTGCCTCCTGCGAGCATGTCACCTCCA
GCCTGCGAGGTCGCTTTCTCTAGCAGTGTCCGCGCCACCGCCTTCTGCTGCCGCAGCCGCTGCC
TAAAGCAGTGGCCCCCGGACCCCCGCCCCTGATCCGCGCCCAGACCCTGGTGCCAGAGGACCAT
GGCTGGTCAGGGCGACTGCTGCGTCAAAGTGGCCGTCAGGATCCGGCCCCAGCTATCAAAGGAG
AAGATTGAAGGCTGTCACATCTGTACCTCCGTTACCCCTGGGGAGCCCCAGGTCCTGCTGGGGA
AGGACAAGGCCTTCACCTATGACTTTGTCTTTGACCTGGACACCTGGCAAGAACAAATCTATTC
GACCTGCGTGAGCAAACTCATCGAAGGCTGCTTTGAGGGCTATAACGCCACAGTACTGGCCTAT
GGACAGACAGGGGCTGGGAAGACATACACTATGGGCACCGGCTTTGACACAGTGACGTCAGAAG
AGGAGCAGGGCATCATCCCAAGGGCCATTGCGCATCTCTTCAGGGGCATCGACGAACGCAAGCG
TCGGGCGCAGGAGCAGGGTGTGACTGGGCCTGAGTTCAAAGTCAGTGCCCAATTCCTGGAGCTC
TACAACGAAGAGATCCTTGACCTGTTTGACAGCACCCGCGACCCTGATGCCCGCCACCGCAGGT
CCAACATCAAGATCCACGAGGATGCCAATGGCGGCATCTACACCACAGGGGTCACTTCTCGCCT
CATCAACTCCCAGGAGGAGCTGATCCAGTGCCTGAAGCAGGGCGCCCTGTCACGAACCACGGCC
AGCACCCAGATGAACGTTCAAAGTTCCCGATCCCACGCCATCTTCACCATTCACCTGTGCCAGA
TGCGCGTGTGTGCCCAGCCTGACCTGGTGAATGAGACAGTGACTGGGCTTCCGGATGGAACGGC
CCCCACGGGCACTGAGTATGAGACGCTCACTGCTAAGTTCCACTTTGTGGACTTGGCGGGCTCA
GAGCGGCTGAAACGGACAGGGGCCACCGGTGAACGAGCCAAAGAGGGCATCTCCATCAACTGTG
GTCTGCTGGCCTTGGGCAATGTGATCAGTGCCTTGGGAGATCAGAGCAAGAAAGTCGTGCACGT
GCCCTACAGGGACTCCAAGCTCACTCGGCTGCTCCAGGACTCTCTTGGAGGCAACAGCCAGACC
ATCATGATCGCCTGTGTGAGCCCCTCAGATCGGGACTTCATGGAGACGCTCAACACTCTCAAAT
ATGCCAATCGGGCTCGAAACATCAAAAACAAAGTGGTAGTGAACCAGGACAAGACCAGCCAGCA
GATCAGCGCGCTGCGAGCCGAGATCGCACGCCTGCAGATGGAGTTGATGGAATACAAGGCGGGC
AAGCGAGTGATTGGGGAGGACGGTGCAGAGGGCTACAGCGACCTGTTCCGGGAGAACGCCATGC
TACAGAAGGAGAACGGAGCACTGAGACTCCGAGTGAAGGCCATGCAGGAAGCCATTGATGCCAT
CAACAACCGGGTCACACAACTCATGAGTCAGGAGGCTAACCTGCTTCTGGCCAAGGCTGGGGAT
GGCAACGAGGCCATTGGCGCTCTGATCCAGAACTACATCCGGGAGATTGAGGAGCTTCGCACGA
AGCTTCTGGAGAGTGAGGCTATGAATGAGTCCCTCCGAAGGAGCCTCTCCCGGGCTTCCGCTCG
GAACCCCTACTCCCTGGGAGCATCTCCAGCAGGTCCAGCCTTTGGGGGCAGCCCGGCCAGCTCC
ATGGAAGATGCTTCTGAAGTGATCCGCAGGGCCAAGCAAGACCTGGAGCGGCTGAAAAAGAAAG
AGGTCAGGCAGCGGAGGAAGAGCCCGGAGAAAGAAGCCTTCAAAAAGAGGGCAAAACTCCAGCA
GGAAAACAGTGAGGAGACGGATGAGAACGAGGCTGAGGAGGAGGAAGAAGAACGAGATGAGAGT
GGCTGTGAGGAGGAGGAGGATGAAGACTCGGGCAGTGAAGAGAGCCTGGTGGACTCGGACTCCG
ACCCTGAGGAAAAGGAAGTCAACTTCCAGGCAGACCTGGCGGACCTGACCTGTGAGATTGAGAT
CAAGCAGAAGCTGATCGACGAGCTGGAGAACAGCCAGCGGCGGCTACAGACGCTCAAGCACCAG
TACGAGGAGAAGCTCATTCTGCTGCAGAACAAGATCCGAGACACACAGCTGGAGCGCGACCGCG
TGCTGCAGAACCTCAGTACTATGGAGTGCTACACGGAGGAGAAGGCCAACAAGATAAAGGCAGA
TTATGAGAAGAGGCTTCGGGAGATGAACCGGGACCTGCAGAAGCTACAGGCTGCTCAAAAGGAG
CATGCCAGGCTGCTCAAGAACCAGTCTCGCTATGAGAGGGAGCTGAAGAAGCTGCAAACGGAGG
TAGCCGAAATGAAGAAGGCCAAGGTAGCCCTCATGAAGCAAATGCGTGAGGAACAGCAGCGGCG
GCGACTGGTGGAGACCAAGAGGAACCGGGAGATTGCTCAGCTCAAGAAGGAGCAACGGAGGCAG
GAGTTCCAGATACGGGCCCTGGAATCTCAGAAGCGCCAGCAGGAAATAGTTCTGAGGAGGAAAA
CCCAGGAGGTTTCCGCACTGAGGCGCTTAGCAAAGCCCATGTCTGAGAGAGTGGCCGGACGTGT
AGGATTGAAGCCCCCCAATATGGATTCTGGGGCTGAGGTGTCTGCCAGCACTACCTCATCTGAG
GCTGAATCCGGAGCTCGCTCTGTCTCCAGCATAGTGCGTCAGTGGAACCGAAAAATCAACCACT
TCCTGGGGGACCACCCGACAGCCACTGTCAATGGCGCCCGCCCGGCCAGGAAAAAGTTCCAAAA
GAAGGGAGCCAGCCAAAGCTTCAGTAAGGCCGCGAGACTCAAGTGGCAGTCCCTGGAACGGAGG
ATCATTGACATTGTCATGCAGAGAATGACCATCGTCAACCTGGAGGCTGATATGGAGCGTCTCA
TAAAGAAAAGGGAGGAGCTCTTCCTCCTACAGGAGGCACTGCGGAGGAAGCGGGAGCGCCTGCA
AGCTGAGAGCCCGGAGGAGGAGAAGGGACTACAGGAACTGGCTGAGGAGATCGAAGTGTTGGCA
GCCAATATTGACTACATCAATGACAGCATCACTGACTGCCAAGCCACTATCATGCAGCTGGAGG
AAACCAAGGAGGAGCTGGATTCGACAGACACATCGGTGGTCATTAGTTCCTGCTCTCTGGCTGA
AGCCCGCCTACTGCTAGACAACTTCCTCAAGGCATCCATTGACAAGGGACTTCAAGTAGCACAG
AAGGAGGCCCAGATCCGGCTGCTGGAAGGACGCCTCAGACAAACAGACATGACAGGCTCTTCCC
AGAACCACCTGCTCCTAGATGCTTTGCGTGAGAAGGCTGAGGCACACCCCGAGCTGCAGGCCCT
CATCTACAATGTGCAACATGAGAATGGCTATGCCAGCACAGATGAGGAAGTTTCAGAGTTCTCT
GAGGGGAGCTTTTCCCAGTCATTCACCATGAAAGGCTCCACCAGCCATGATGACTTCAAGTTCA
AGGGTGAGCCCAAGCTGTCCGCACAAATGAAGGCCGTGTCTGCGGAGTGCCTAGGACCCCCACT
GGACAGCTCCACCAAGAACATCACCAAGTCCCTGGCCTCCCTCGTTGAGATCAAAGAGGATGGG
GTGGGCTTCTCTATCCGGGACCCATACTACCGAGACAAGGTCTCACGCACCGTCAGCCTGCCCA
CCCGGGGCAGCACTTTCCCTCGGCAGTCTCGAGGTGCCACGGATACATCCCCTCTGACCCGCAG
GAAGTCTTATGACCGGGGACAGCCCATCAGATCAACAGACATAGGATTCACACCTCCCTCATCA
CCTCCCACTCGGCCCCGCAACGACCGCAATGTCTTTTCTCGCCTCACCAGCAATCAGAGCCAGG
GCTCGGCACTGGACAAGTCTGATGACAGCGACTCCTCTTTGTCGGAGGTCCTGAGAGGCATCAT
CACCCCCATTGGCGGAGCAAAGGGAGCGCGGACGGCCCCGTTGCAGTGTGTCTCCATGGCCGAG
GGCCACACCAAGCCCATCCTCTGCCTGGATGCCACCGATGAATTACTTTTCACTGGATCCAAAG
ACCGTAGCTGCAAGATGTGGAACCTGGTAACAGGGCAGGAGATTGCAGCTCTCAAGGGCCACCC
CAACAACGTGGTTTCTATCAAATACTGCAGCCACTCAGGGCTGGTGTTCTCTGTGTCCAGCTCC
TACGTCAAGGTGTGGGACATCCGGGACTCAGCCAAGTGCATCCGGACGCTCACGTCCTCAGGCC
AGGTGATCTCAGGAGATGCTTGCATGGCCACATCCACCCGTGCCATCACCAGTTCCCAGGGAGA
GCATCAGATTAACCAGATGGCCCTCAGCCCCTCGGGCACCATGTTATATGTTGCCTCCGGCAAC
GCTGTCCGCATCTGGGAGCTCAACAGGTTCCAGCCCATTGGCAAACTGACCGGCCACATTGGCC
CAGTGATGTGCCTGACAGTCACCCAGACTTCAAACCAGCATGACCTCGTGGTGACTGGCTCCAA
GGACCACTATGTGAAGATGTTCCAGCTGGGCGACTGTGTAACGGGCACCATTGGCCCAACCCAC
AACTTTGAGCCCCCTCACTATGACGGTATCGAATGCCTGGCCATCCAAGGAGATATACTGTTCA
GTGGTTCCAGAGACAATGGCATCAAGAAGTGGGACCTGGATCAGCAGGAGCTCATTCAGCAAAT
CCCCAACGCTCACAAGGACTGGGTGTGCGCCCTGGCCTTTGTACCCGGCCGGCCCATGTTACTG
AGCGCCTGCCGGGCAGGCTTCATCAAGGTCTGGAATGTGGACAACTTCACGCCCATTGGTGAGA
TCAAGGGCCATGACAGCCCCATCAATGCCATCTGCACCAACAGCAAGCACATCTTCACGGCCTC
CAGTGACCTGACAGTGAAGTTCTGGAGCATGCGGCGGCTACCAGCAGCCCACCCCTGAAGTTAG
GACTGAAGGTGGCCAGACCCTCAGACCCAGCATGGAGAGGAAGCTTGGGGCCGACCTTACCAGA
CCAGCCAGCCAGGTTCACCGAGGACAGAGGGTGTGGCCCTTCTCTTGCTCTGCTTCCCCCACCA
CCCCCTCTGCCCCTCCCCTGCCTCCCGAGAAAGTGGAGGCCGAGGAGGGAGACAAGCTGTGAAG
CCAAAGGGCATGATTCATTCCCCCTGACACCCCGCCTGTCCCCTGCCTTTTCCTCAGCTGGCCA
CATTGTCTCCTGCTGAGCCAGCCCTGCCCCTCTCCCAGGCCCTCAGCCTAGGGTAAGACTGAAG
GAGAAGCAGGGAGAAGCCCCGTCTATCTGCCAGTAAGCTAGCCCCTTCTGGGTCTCCAAGCCCC
ACCCCCGGAGCCACTGCACCTGCCTCTGAGCCCACCCAGGTAGTTCTCAGGTAACCATGGAGAC
CAGATGTAAGCAGCGGAGTCCTGCAGCTGACCCGAAACCCTACAGCCACCCACAGCCAATCCCG
GTGGGGCCCAGTCCTTCCTCGAGGTTCCCTTCGGCTGGGACCTCCGTGGAGCTGCTTAAACAGT
TCCTTTGGGGAGAAGGTCAGCAATACTGCAGTCATTTAATGTATTGATTTTTTATTTTTATGTT
TTGCTGTTGCCTCCTGGAAACTGACTTGAAGTTTCTTCCCATTCGTCCCTCCGCTCCTGGCGGG
GGGTCTTCTCTCTGGCGCTCCAGGGCCCTCCCTCTGATGACTCTCAGATGAGGGAAAGTCCTCT
CCACTGACCATTGTTCCAACCCTGCCCATCCCGGCATACCTTCTAGGATAGACCAGGTCTCTAG
GCCGCCTGATGCCACAGTGCCTTTCTCCATCCTGAGGCCTGGCATCACGCTGGGCAGCCTTATG
CTAGCCATGCCCGCAGTCCACATGTGTCTTCTCCTCCAGGGCCTTGTGCCCACAGCCCCTGGTC
ATAGCGTCCACCCCAACAGCCCAGGACCAGGGAGCCCACGCTCCCAAGAGTCCTGGGATGTCGC
TTGGTGGACCTCCACTATGTAGGTGTGGGTAGTAAGGATACCACATCCTTTGCCTAACCCCCAG
CCAATTATGTCGTCCTCTCCCTCCCCACAAGGGGACAGGGAGCATCCTCAGCTTCTTTTCCTTT
AGTTGTCCCAGAAACTGGTTTTGAAGCCTTAAAACCAGCCTGGGCCAAATGCCCTCCCTTTTCA
ATTAGCACGAGGAGGCACGGACCCCTTGCTTCTCCCCTTAGTGCTGTGAACGCAGCAGCTGTTG
GGATGAGGCGAAGTCAGTGTCTAGCGCCCCCTACCGGATCGACTCTGAATTCATAGGACTGGGC
CGTGAGAGGGGCCAGCTCCATTCCTCACCCCTGGCTTCCCCTGCCCTTAAACTGGTCCACGCTT
ATTCTAATGCTTCACTGGTCTTGTGCATCCTGGTCTCATTCTGGGATCCCCGGCTCCATTGAAG
ACGCGGTGACTTGCAGACTTTGGAGAGCTAGCGTACCACCTCTGCACTTAGCCCTTCTCCCTCA
AGTAACACTGGTGCCTGTTCATGAGGCCCTGGGATGAGAGAGTTAGGAGCTGATAAGACCAGAC
CCTCTCTGGACCATGCCAGAGCTGTGTCTGAGGCAGAAACTAAGAGAAGTGTCCCGCTTATCGG
TGGCTACTGCCAGACACGGTGTTAAGTCTGGGATATTTAGAACGACCTACCTGGAAAGCAGGTC
ATCTGGAACCTGGACCGCCTGTCTGCAATGGCCAGAGATCCTCCTCCCTCCGCTCATTCTGGGA
GTGTTAAGGAACGTCCTTAGCACACAGAAGTGACCACATCTTCTCCTTTATCCCTCTCCACCTG
AATGGACAGCCTGGACCTTACACCCTGTGAGAAAACCCAGAACCCGTCTGCATGACTGTTTACA
AACTACAGAAACACGTGAGACTCGTGTCCCGACCCCACAGGCTGGGCCGCCCCAATCCCCCGAT
GCCTGTACTGTATAGCTGCAAGGCTAGTTCTTGCACAAAGTGTGTGTGGTCTTACAGCCCCCCG
AGAGGTGCTCACTGGCATTACCCCCTCTGCCATTTCTGATGGGTCACTACCTCATGGCGGGGCT
GCTGTGCTGTCCCAGCGAGTGTCATTGACTAAACTTGAAATACTTCGGAGCTCTGAGCTCATCG
TCACCGAGCCCTTCTGAGCTGTGTTCTGGGGACGTTGGAGTCCCTGACCACCCACCCTTTCCGG
GATGTCCAAGGTACAGGGGCAGGCTCCCCAGCTCCACTCATTGCACAAGCATCCTACCTGTTGG
AAGCACAAACTGGTTGTGATTTGAGCACAGTAGCAGGTCTCTGGGTAGACAGCATGAGCAAACT
TGGGCCCAGGAGCTCTTTCCCAGGTGGGCTTCGTCTTAGGCTAGACGAGAGCTGCCCGTGTCTG
TAGCTGACTCACCCTGTATTTCTGGGAATTATTACTTAACTTCTTGTGCCCAACTTAGGACTTG
AGGCCCAGGCCACCTCTGTATGCTGTGGGGGTCTTCCCTAGATCCCCACACCCAAAGCCTTTAA
CAACCAGAGTATAGCTGGTACCCCACCATACTGAGCCTGAAGAACTTGGACCCAGACTCCCATC
TCTTGAGCTAACCCCAACATCCATGCTTACAAAACTGATAAGCTTGCATCTGGATGGAAAGTGT
CTACTGTCCCCACTCTCTTTGGCCTTTCCTGTGCACAGTCCTGGGCCAGGACCCATTCCAGTAT
TAACCAGTTCAGTGTTTGGTCTTGTTGGAGAGACTTGACAGCAGCCGGCTCATGGAGAGGCTGC
CTGGAGCAGCCTTTGAAGACTGCAGAGGAGAGAGAGAGAACTCAAAGAGTAAGAGCCTGACCCA
GCACAGCCCTTGATGTGGTCAGATCGCCACCACAGCTACTTGAAAAGGGACAGCCGAGGGTCTG
GGAGTAGCCTCCCACCGCTGCCCCAGCTGCTGGCTTGGGATCGTCTTAGGCTGTGTGGCTTGGG
CAAAGCACAGTTTAAAGCACAAAACCACGTGGGGAAGATGCTGCCTTGCTGGGGGATTCTCCTG
CTTCCCTTTGTGTTGATAGTGCAGGCAGGGAGCTGCTGGGAAGGCAGGACATCTGCCCTGTCCT
TGGAGGCCTCCCCTGGAGTGTGGCCAGGTGCAGCAGGCACACCCCTTTGGCTGTGCCTCTTATG
TTTGTGTGGGCAGGACCTGCCCTTCGGAGAGCAGTGAATTCCTTCCCACCATGTGGCCCAAACC
TGCCACATCTGTCCCTTTGTCCTTTCAAACAAGAAACCGCTGGCTGCTCCCTTTGATGAGCACA
GTGGCCAGTGCCACCACAGACCTTCCTGAGCCCAACCTGTCACCTCCCGACTCCTAGGTCTTCA
CTGCTCCTTGTGTGCAAGAAGAGAATCTGCAGGGAAAGTTCGGTTTCTTTGACATCACTGTTCT
GTCCCCCGTGTGTCCCCCCCCCCTTCATCTCCAGCACCCAGCTGGCCTCCCTTTGCCCCTCCCT
TTCACCTTCAATCCTACATCCGGAAGGCTCTGTCAGAAAGTGGGAAGTCAGAAAAGACCACTGA
TGTCTCAGTGCCCTGCCCCGCCCTGCCATGCCACCAGCTCTTAGAGCGGTTGCCCCTCCCTGGG
CTGCAGGGTCTCTTTTGGCTCATGCGCTCTCCCGTGACGTGGTAGCACAAGGTGTGTATATGTT
TTGTACCTCTGCTGGCGACTGTACATAGTGTATGAAAGTTATTTAAGCCTCAGGCTGTACATTT
CTGTTCTGGAATCGGATGTGTGTGTTCTAAGAGCTTGTCATAAATAAAACCATTGTTCACAGA

hide sequence

RefSeq Acc Id:

XM_039090608 ⟹ XP_038946536

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	50,127,847 - 50,168,750 (+)	NCBI
mRatBN7.2	13	47,576,142 - 47,617,038 (+)	NCBI

RefSeq Acc Id:

XM_063272196 ⟹ XP_063128266

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	50,127,847 - 50,173,550 (+)	NCBI

RefSeq Acc Id:

XM_063272197 ⟹ XP_063128267

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	50,127,847 - 50,173,550 (+)	NCBI

RefSeq Acc Id:

XM_063272198 ⟹ XP_063128268

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	50,127,847 - 50,173,550 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001402729	(Get FASTA)	NCBI Sequence Viewer
	XP_006249916	(Get FASTA)	NCBI Sequence Viewer
	XP_006249918	(Get FASTA)	NCBI Sequence Viewer
	XP_006249919	(Get FASTA)	NCBI Sequence Viewer
	XP_038946536	(Get FASTA)	NCBI Sequence Viewer
	XP_063128266	(Get FASTA)	NCBI Sequence Viewer
	XP_063128267	(Get FASTA)	NCBI Sequence Viewer
	XP_063128268	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM09667	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000011324
	ENSRNOP00000011324.6
	ENSRNOP00000074306
	ENSRNOP00000082225
	ENSRNOP00000094546
GenBank Protein	F1M5N7	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_006249918 ⟸ XM_006249856
- Peptide Label:	isoform X5
- UniProtKB:	A0A0G2K7Q9 (UniProtKB/TrEMBL), A0A8I6G960 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGQGDCCVKVAVRIRPQLSKEKIEGCHICTSVTPGEPQVLLGKDKAFTYDFVFDLDTWQEQIY STCVSKLIEGCFEGYNATVLAYGQTGAGKTYTMGTGFDTVTSEEEQGIIPRAIAHLFRGIDERK RRAQEQGVTGPEFKVSAQFLELYNEEILDLFDSTRDPDARHRRSNIKIHEDANGGIYTTGVTSR LINSQEELIQCLKQGALSRTTASTQMNVQSSRSHAIFTIHLCQMRVCAQPDLVNETVTGLPDGT APTGTEYETLTAKFHFVDLAGSERLKRTGATGERAKEGISINCGLLALGNVISALGDQSKKVVH VPYRDSKLTRLLQDSLGGNSQTIMIACVSPSDRDFMETLNTLKYANRARNIKNKVVVNQDKTSQ QISALRAEIARLQMELMEYKAGKRVIGEDGAEGYSDLFRENAMLQKENGALRLRVKAMQEAIDA INNRVTQLMSQEANLLLAKAGDGNEAIGALIQNYIREIEELRTKLLESEAMNESLRRSLSRASA RNPYSLGASPAGPAFGGSPASSMEDASEVIRRAKQDLERLKKKEVRQRRKSSPEKEAFKKRAKL QQENSEETDENEAEEEEEERDESGCEEEEDEDSGSEESLVDSDSDPEEKEVNFQADLADLTCEI EIKQKLIDELENSQRRLQTLKHQYEEKLILLQNKIRDTQLERDRVLQNLSTMECYTEEKANKIK ADYEKRLREMNRDLQKLQAAQKEHARLLKNQSRYERELKKLQTEVAEMKKAKVALMKQMREEQQ RRRLVETKRNREIAQLKKEQRRQEFQIRALESQKRQQEIVLRRKTQEVSALRRLAKPMSERVAG RVGLKPPNMDSGAEVSASTTSSEAESGARSVSSIVRQWNRKINHFLGDHPTATVNGARPARKKF QKKGASQSFSKAARLKWQSLERRIIDIVMQRMTIVNLEADMERLIKKREELFLLQEALRRKRER LQAESPEEEKGLQELAEEIEVLAANIDYINDSITDCQATIMQLEETKEELDSTDTSVVISSCSL AEARLLLDNFLKASIDKGLQVAQKEAQIRLLEGRLRQTDMTGSSQNHLLLDALREKAEAHPELQ ALIYNVQHENGYASTDEEVSEFSEGSFSQSFTMKGSTSHDDFKFKGEPKLSAQMKAVSAECLGP PLDSSTKNITKSLASLVEIKEDGVGFSIRDPYYRDKVSRTVSLPTRGSTFPRQSRGATDTSPLT RRKSYDRGQPIRSTDIGFTPPSSPPTRPRNDRNVFSRLTSNQSQGSALDKSDDSDSSLSEVLRG IITPIGGAKGARTAPLQCVSMAEGHTKPILCLDATDELLFTGSKDRSCKMWNLVTGQEIAALKG HPNNVVSIKYCSHSGLVFSVSSSYVKVWDIRDSAKCIRTLTSSGQVISGDACMATSTRAITSSQ GEHQINQMALSPSGTMLYVASGNAVRIWELNRFQPIGKLTGHIGPVMCLTVTQTSNQHDLVVTG SKDHYVKMFQLGDCVTGTIGPTHNFEPPHYDGIECLAIQGDILFSGSRDNGIKKWDLDQQELIQ QIPNAHKDWVCALAFVPGRPMLLSACRAGFIKVWNVDNFTPIGEIKGHDSPINAICTNSKHIFT ASSDLTVKFWSMRRLPAAHP hide sequence

RefSeq Acc Id:	XP_006249916 ⟸ XM_006249854
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6AJU2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGQGDCCVKVAVRIRPQLSKEKIEGCHICTSVTPGEPQVLLGKDKAFTYDFVFDLDTWQEQIY STCVSKLIEGCFEGYNATVLAYGQTGAGKTYTMGTGFDTVTSEEEQGIIPRAIAHLFRGIDERK RRAQEQGVTGPEFKVSAQFLELYNEEILDLFDSTRDPDARHRRSNIKIHEDANGGIYTTGVTSR LINSQEELIQCLKQGALSRTTASTQMNVQSSRSHAIFTIHLCQMRVCAQPDLVNETVTGLPDGT APTGTEYETLTAKFHFVDLAGSERLKRTGATGERAKEGISINCGLLALGNVISALGDQSKKVVH VPYRDSKLTRLLQDSLGGNSQTIMIACVSPSDRDFMETLNTLKYANRARNIKNKVVVNQDKTSQ QISALRAEIARLQMELMEYKAGKRVIGEDGAEGYSDLFRENAMLQKENGALRLRVKAMQEAIDA INNRVTQLMSQEANLLLAKAGDGNEAIGALIQNYIREIEELRTKLLESEAMNESLRRSLSRASA RNPYSLGASPAGPAFGGSPASSMEDASEVIRRAKQDLERLKKKEVRQRRKSSPEKEAFKKRAKL QQENSEETDENEAEEEEEERDESGCEEEEDEDSGSEESLVDSDSDPEEKEVNFQADLADLTCEI EIKQKLIDELENSQRRLQTLKHQYEEKLILLQNKIRDTQLERDRVLQNLSTMECYTEEKANKIK ADYEKRLREMNRDLQKLQAAQKEHARLLKNQSRYERELKKLQTEVAEMKKAKVALMKQMREEQQ RRRLVETKRNREIAQLKKEQRRQEFQIRALESQKRQQEIVLRRKTQEVSALRRLAKPMSERVAG RVGLKPPNMDSGAEVSASTTSSEAESGARSVSSIVRQWNRKINHFLGDHPTATVNGARPARKKF QKKGASQSFSKAARLKWQSLERRIIDIVMQRMTIVNLEADMERLIKKREELFLLQEALRRKRER LQAESPEEEKGLQELAEEIEVLAANIDYINDSITDCQATIMQLEETKEELDSTDTSVVISSCSL AEARLLLDNFLKASIDKGLQVAQKEAQIRLLEGRLRQTDMTGSSQNHLLLDALREKAEAHPELQ ALIYNVQHENGYASTDEEVSEFSEGSFSQSFTMKGSTSHDDFKFKGEPKLSAQMKAVSAECLGP PLDSSTKNITKSLASLVEIKEDGVGFSIRDPYYRDKVSRTVSLPTRGSTFPRQSRGATDTSPLT RRKSYDRGQPIRSTDIGFTPPSSPPTRPRNDRNVFSRLTSNQSQGSALDKGIITPIGGAKGART APLQCVSMAEGHTKPILCLDATDELLFTGSKDRSCKMWNLVTGQEIAALKGHPNNVVSIKYCSH SGLVFSVSSSYVKVWDIRDSAKCIRTLTSSGQVISGDACMATSTRAITSSQGEHQINQMALSPS GTMLYVASGNAVRIWELNRFQPIGKLTGHIGPVMCLTVTQTSNQHDLVVTGSKDHYVKMFQLGD CVTGTIGPTHNFEPPHYDGIECLAIQGDILFSGSRDNGIKKWDLDQQELIQQIPNAHKDWVCAL AFVPGRPMLLSACRAGFIKVWNVDNFTPIGEIKGHDSPINAICTNSKHIFTASSDCRVKLWNYV PGLTPCLPRRVLAIKGRATTLP hide sequence

RefSeq Acc Id:	XP_006249919 ⟸ XM_006249857
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6AJU2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGQGDCCVKVAVRIRPQLSKEKIEGCHICTSVTPGEPQVLLGKDKAFTYDFVFDLDTWQEQIY STCVSKLIEGCFEGYNATVLAYGQTGAGKTYTMGTGFDTVTSEEEQGIIPRAIAHLFRGIDERK RRAQEQGVTGPEFKVSAQFLELYNEEILDLFDSTRDPDARHRRSNIKIHEDANGGIYTTGVTSR LINSQEELIQCLKQGALSRTTASTQMNVQSSRSHAIFTIHLCQMRVCAQPDLVNETVTGLPDGT APTGTEYETLTAKFHFVDLAGSERLKRTGATGERAKEGISINCGLLALGNVISALGDQSKKVVH VPYRDSKLTRLLQDSLGGNSQTIMIACVSPSDRDFMETLNTLKYANRARNIKNKVVVNQDKTSQ QISALRAEIARLQMELMEYKAGKRVIGEDGAEGYSDLFRENAMLQKENGALRLRVKAMQEAIDA INNRVTQLMSQEANLLLAKAGDGNEAIGALIQNYIREIEELRTKLLESEAMNESLRRSLSRASA RNPYSLGASPAGPAFGGSPASSMEDASEVIRRAKQDLERLKKKEVRQRRKSPEKEAFKKRAKLQ QENSEETDENEAEEEEEERDESGCEEEEDEDSGSEESLVDSDSDPEEKEVNFQADLADLTCEIE IKQKLIDELENSQRRLQTLKHQYEEKLILLQNKIRDTQLERDRVLQNLSTMECYTEEKANKIKA DYEKRLREMNRDLQKLQAAQKEHARLLKNQSRYERELKKLQTEVAEMKKAKVALMKQMREEQQR RRLVETKRNREIAQLKKEQRRQEFQIRALESQKRQQEIVLRRKTQEVSALRRLAKPMSERVAGR VGLKPPNMDSGAEVSASTTSSEAESGARSVSSIVRQWNRKINHFLGDHPTATVNGARPARKKFQ KKGASQSFSKAARLKWQSLERRIIDIVMQRMTIVNLEADMERLIKKREELFLLQEALRRKRERL QAESPEEEKGLQELAEEIEVLAANIDYINDSITDCQATIMQLEETKEELDSTDTSVVISSCSLA EARLLLDNFLKASIDKGLQVAQKEAQIRLLEGRLRQTDMTGSSQNHLLLDALREKAEAHPELQA LIYNVQHENGYASTDEEVSEFSEGSFSQSFTMKGSTSHDDFKFKGEPKLSAQMKAVSAECLGPP LDSSTKNITKSLASLVEIKEDGVGFSIRDPYYRDKVSRTVSLPTRGSTFPRQSRGATDTSPLTR RKSYDRGQPIRSTDIGFTPPSSPPTRPRNDRNVFSRLTSNQSQGSALDKSDDSDSSLSEVLRGI ITPIGGAKGARTAPLQCVSMAEGHTKPILCLDATDELLFTGSKDRSCKMWNLVTGQEIAALKGH PNNVVSIKYCSHSGLVFSVSSSYVKVWDIRDSAKCIRTLTSSGQVISGDACMATSTRAITSSQG EHQINQMALSPSGTMLYVASGNAVRIWELNRFQPIGKLTGHIGPVMCLTVTQTSNQHDLVVTGS KDHYVKMFQLGDCVTGTIGPTHNFEPPHYDGIECLAIQGDILFSGSRDNGIKKWDLDQQELIQQ IPNAHKDWVCALAFVPGRPMLLSACRAGFIKVWNVDNFTPIGEIKGHDSPINAICTNSKHIFTA SSDLTVKFWSMRRLPAAHP hide sequence

Ensembl Acc Id:

ENSRNOP00000074306 ⟸ ENSRNOT00000090599

Ensembl Acc Id:

ENSRNOP00000011324 ⟸ ENSRNOT00000011324

RefSeq Acc Id:	XP_038946536 ⟸ XM_039090608
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I6AJU2 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000082225 ⟸ ENSRNOT00000098466

Ensembl Acc Id:

ENSRNOP00000094546 ⟸ ENSRNOT00000105337

RefSeq Acc Id:	NP_001402729 ⟸ NM_001415800
- UniProtKB:	A0A8I6AJU2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063128266 ⟸ XM_063272196
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6G960 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063128267 ⟸ XM_063272197
- Peptide Label:	isoform X2
- UniProtKB:	F1M5N7 (UniProtKB/Swiss-Prot), A0A8I6AJU2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063128268 ⟸ XM_063272198
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6AJU2 (UniProtKB/TrEMBL)

Protein Domains

Kinesin motor

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-F1M5N7-F1-model_v2	AlphaFold	F1M5N7	1-1634	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13698858

Promoter ID:

EPDNEW_R9378

Type:

initiation region

Name:

Kif21b_1

Description:

kinesin family member 21B

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	13	52,976,491 - 52,976,551	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306206	AgrOrtholog
BioCyc Gene	G2FUF-18183	BioCyc
Ensembl Genes	ENSRNOG00000008471	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000011324	ENTREZGENE
	ENSRNOT00000011324.8	UniProtKB/Swiss-Prot
	ENSRNOT00000090599	ENTREZGENE
	ENSRNOT00000098466	ENTREZGENE
	ENSRNOT00000105337	ENTREZGENE
Gene3D-CATH	2.130.10.10	UniProtKB/Swiss-Prot
	3.40.850.10	UniProtKB/Swiss-Prot
InterPro	KIF21A/B_hel_1	UniProtKB/Swiss-Prot
	KIF21A/B_hel_2	UniProtKB/Swiss-Prot
	Kinesin-like_fam	UniProtKB/Swiss-Prot
	Kinesin_motor_CS	UniProtKB/Swiss-Prot
	Kinesin_motor_dom	UniProtKB/Swiss-Prot
	Kinesin_motor_dom_sf	UniProtKB/Swiss-Prot
	P-loop_NTPase	UniProtKB/Swiss-Prot
	WD40/YVTN_repeat-like_dom	UniProtKB/Swiss-Prot
	WD40_repeat	UniProtKB/Swiss-Prot
	WD40_repeat_CS	UniProtKB/Swiss-Prot
	WD40_repeat_dom_sf	UniProtKB/Swiss-Prot
NCBI Gene	289397	ENTREZGENE
PANTHER	CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED	UniProtKB/Swiss-Prot
	KINESIN-LIKE PROTEIN KIF21B ISOFORM X1	UniProtKB/Swiss-Prot
Pfam	KIF21A	UniProtKB/Swiss-Prot
	KIF21A_2nd	UniProtKB/Swiss-Prot
	Kinesin	UniProtKB/Swiss-Prot
	WD40	UniProtKB/Swiss-Prot
PhenoGen	Kif21b	PhenoGen
PRINTS	KINESINHEAVY	UniProtKB/Swiss-Prot
PROSITE	KINESIN_MOTOR_1	UniProtKB/Swiss-Prot
	KINESIN_MOTOR_2	UniProtKB/Swiss-Prot
	WD_REPEATS_1	UniProtKB/Swiss-Prot
	WD_REPEATS_2	UniProtKB/Swiss-Prot
	WD_REPEATS_REGION	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000008471	RatGTEx
SMART	KISc	UniProtKB/Swiss-Prot
	WD40	UniProtKB/Swiss-Prot
Superfamily-SCOP	Prefoldin	UniProtKB/Swiss-Prot
	SSF50978	UniProtKB/Swiss-Prot
	SSF52540	UniProtKB/Swiss-Prot
UniProt	A0A0G2K7Q9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AJU2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6G960	ENTREZGENE, UniProtKB/TrEMBL
	F1M5N7	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Kif21b	kinesin family member 21B	Kif21b_predicted	kinesin family member 21B (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Kif21b_predicted	kinesin family member 21B (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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