Advanced Search (OLGA)

Gene: Ephb6 (Eph receptor B6) Rattus norvegicus

Analyze

Symbol:

Ephb6

Name:

Eph receptor B6

RGD ID:

1306163

Description:

Predicted to enable transmembrane-ephrin receptor activity. Predicted to be involved in axon guidance and ephrin receptor signaling pathway. Predicted to act upstream of or within activated T cell proliferation; positive regulation of T cell costimulation; and type IV hypersensitivity. Predicted to be located in cell surface. Predicted to be active in dendrite and plasma membrane. Orthologous to human EPHB6 (EPH receptor B6); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

ephrin type-B receptor 6; LOC102554290; LOC312275; serine/arginine repetitive matrix protein 2-like; tyrosine-protein kinase-defective receptor EPH-6

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	EPHB6 (EPH receptor B6)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB
Mus musculus (house mouse):	Ephb6 (Eph receptor B6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ephb6 (EPH receptor B6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	EPHB6 (EPH receptor B6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	EPHB6 (EPH receptor B6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ephb6 (EPH receptor B6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	EPHB6 (EPH receptor B6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	EPHB6 (EPH receptor B6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ephb6 (EPH receptor B6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Ephb6 (EPH receptor B6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	CCSAP (centriole, cilia and spindle associated protein)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	EPHB6 (EPH receptor B6)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Ephb6 (Eph receptor B6)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	ephb6 (eph receptor B6)	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PhylomeDB)
Drosophila melanogaster (fruit fly):	Eph	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Eph	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	vab-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ephb6	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	71,458,632 - 71,473,889 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	71,458,971 - 71,476,659 (+)	Ensembl				GRCr8
mRatBN7.2	4	70,491,973 - 70,507,230 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	70,491,973 - 70,507,230 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	75,409,463 - 75,424,754 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	71,322,717 - 71,338,007 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	69,731,061 - 69,746,342 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	70,903,253 - 70,918,514 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	70,903,253 - 70,918,514 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	135,690,323 - 135,705,579 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	69,316,600 - 69,331,856 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	65,457,027 - 65,472,281 (+)	NCBI		Celera
RGSC_v3.1	4	69,593,119 - 69,607,982 (+)	NCBI
Cytogenetic Map	4	q23	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

malaria (ISO)

myoepithelioma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

17beta-estradiol (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

3,3',5,5'-tetrabromobisphenol A (ISO)

3,4-methylenedioxymethamphetamine (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

3-methylcholanthrene (ISO)

4,4'-sulfonyldiphenol (ISO)

5-aza-2'-deoxycytidine (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

acrylamide (EXP,ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

alpha-amanitin (ISO)

amphetamine (EXP)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

butanal (ISO)

cadmium atom (EXP)

cadmium dichloride (EXP,ISO)

calcitriol (ISO)

carbon nanotube (ISO)

cisplatin (ISO)

cocaine (EXP)

cyclosporin A (ISO)

dexamethasone (ISO)

dibenz[a,h]anthracene (ISO)

dibenzo[a,l]pyrene (ISO)

diethyl malate (ISO)

doxorubicin (ISO)

elemental selenium (ISO)

endosulfan (EXP)

epoxiconazole (ISO)

ethanol (ISO)

folic acid (ISO)

fulvestrant (ISO)

furan (EXP)

glycine betaine (EXP)

glyphosate (EXP)

homocysteine (ISO)

ibuprofen (ISO)

Indeno[1,2,3-cd]pyrene (ISO)

indole-3-methanol (EXP)

indometacin (ISO)

iron dichloride (ISO)

maneb (ISO)

mono(2-ethylhexyl) phthalate (ISO)

nickel atom (ISO)

nickel sulfate (ISO)

ochratoxin A (ISO)

paracetamol (EXP)

paraquat (EXP,ISO)

perfluorohexanesulfonic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phorbol 13-acetate 12-myristate (ISO)

potassium dichromate (ISO)

rofecoxib (ISO)

selenium atom (ISO)

silicon dioxide (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenate (ISO)

testosterone (ISO)

tetrachloromethane (EXP)

thioacetamide (EXP)

trichloroethene (EXP)

triclosan (ISO)

triphenyl phosphate (ISO)

urethane (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

activated T cell proliferation (ISO)

axon guidance (IBA)

cell surface receptor protein tyrosine kinase signaling pathway (IEA)

ephrin receptor signaling pathway (IBA)

positive regulation of T cell costimulation (ISO)

T cell mediated immunity (ISO)

type IV hypersensitivity (ISO)

Cellular Component

cell surface (IEA,ISO)

dendrite (IBA)

membrane (IEA)

plasma membrane (IBA,IEA)

Molecular Function

ATP binding (IEA)

ephrin receptor activity (IEA)

nucleotide binding (IEA)

protein binding (ISO)

protein kinase activity (IEA)

transmembrane-ephrin receptor activity (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	The receptor tyrosine kinase EphB2 promotes hepatic fibrosis in mice.	Mimche PN, etal., Hepatology. 2015 Sep;62(3):900-14. doi: 10.1002/hep.27792. Epub 2015 Apr 22.
5.	GOA pipeline	RGD automated data pipeline
6.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:15057822	PMID:15599401

Genomics

Comparative Map Data

Ephb6
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	71,458,632 - 71,473,889 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	71,458,971 - 71,476,659 (+)	Ensembl				GRCr8
mRatBN7.2	4	70,491,973 - 70,507,230 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	70,491,973 - 70,507,230 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	75,409,463 - 75,424,754 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	71,322,717 - 71,338,007 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	69,731,061 - 69,746,342 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	70,903,253 - 70,918,514 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	70,903,253 - 70,918,514 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	135,690,323 - 135,705,579 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	69,316,600 - 69,331,856 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	65,457,027 - 65,472,281 (+)	NCBI		Celera
RGSC_v3.1	4	69,593,119 - 69,607,982 (+)	NCBI
Cytogenetic Map	4	q23	NCBI

EPHB6
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	142,855,076 - 142,871,093 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	142,854,930 - 142,871,094 (+)	Ensembl			hg38	GRCh38
GRCh37	7	142,552,838 - 142,568,847 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	142,262,914 - 142,278,969 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	7	142,069,628 - 142,085,682	NCBI
Celera	7	137,390,094 - 137,406,149 (+)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI
HuRef	7	136,891,079 - 136,907,058 (+)	NCBI		HuRef
CHM1_1	7	142,488,986 - 142,505,065 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	144,210,901 - 144,226,909 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	141,954,640 - 141,970,711 (+)	NCBI

Ephb6
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	41,581,940 - 41,597,445 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	41,582,416 - 41,597,443 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	6	41,603,834 - 41,620,509 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	41,605,482 - 41,620,509 (+)	Ensembl			mm10	GRCm38
MGSCv37	6	41,555,481 - 41,570,506 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	6	41,535,175 - 41,550,109 (+)	NCBI		MGSCv36	mm8
Celera	6	41,558,073 - 41,573,098 (+)	NCBI		Celera
Cytogenetic Map	6	B2.1	NCBI
cM Map	6	19.77	NCBI

Ephb6
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955494	812,855 - 820,475 (+)	Ensembl
ChiLan1.0	NW_004955494	812,482 - 820,679 (+)	NCBI	ChiLan1.0	ChiLan1.0

EPHB6
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	179,709,362 - 179,719,509 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	31,713,585 - 31,729,765 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	134,845,936 - 134,862,114 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	147,337,558 - 147,353,575 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	147,337,558 - 147,353,575 (+)	Ensembl			panPan2	panpan1.1

EPHB6
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	16	6,706,302 - 6,718,566 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	16	6,706,313 - 6,718,566 (-)	Ensembl			canFam3	CanFam3.1
ROS_Cfam_1.0	16	6,617,379 - 6,632,929 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	16	6,617,386 - 6,629,133 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	16	6,570,657 - 6,586,203 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	16	6,422,134 - 6,437,682 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	6,480,896 - 6,496,448 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Ephb6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	12,558,265 - 12,573,314 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936527	329,990 - 345,167 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936527	330,034 - 345,166 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EPHB6
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	7,346,565 - 7,389,504 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	18	7,346,793 - 7,419,859 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	18	7,652,270 - 7,659,953 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

EPHB6
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	111,742,236 - 111,750,349 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	111,742,268 - 111,752,179 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666072	8,457,010 - 8,474,045 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ephb6
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624800	12,069,908 - 12,074,669 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624800	12,069,977 - 12,076,992 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Ephb6
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	6	98,992,630 - 98,999,906 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Ephb6
237 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	50
Count of miRNA genes:	45
Interacting mature miRNAs:	48
Transcripts:	ENSRNOT00000019720
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1358352	Srcrt3	Stress Responsive Cort QTL 3	2.29		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	4	39431983	123203361	Rat
1549843	Bw53	Body weight QTL 53		0.0001	body mass (VT:0001259)	body weight gain (CMO:0000420)	4	59753119	104753119	Rat
61445	Strs3	Sensitivity to stroke QTL 3	3		cerebrum integrity trait (VT:0010549)	post-insult time to onset of cerebrovascular lesion (CMO:0002343)	4	41400577	86400577	Rat
6893678	Bw108	Body weight QTL 108	2.6	0.006	body mass (VT:0001259)	body weight (CMO:0000012)	4	44425024	89425024	Rat
10755501	Bp390	Blood pressure QTL 390	2.5		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	4	27730518	170099664	Rat
1358363	Sradr3	Stress Responsive Adrenal Weight QTL 3	6.19		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	4	58817672	103817672	Rat
61330	Eau1	Experimental allergic uveoretinitis QTL 1		0.0003	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	4	26234499	134199155	Rat
61336	Bp21	Blood pressure QTL 21	4.6		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	58080146	80212111	Rat
6909128	Pancm4	Pancreatic morphology QTL 4	11.35		pancreas mass (VT:0010144)	pancreas wet weight (CMO:0000626)	4	27862204	126119996	Rat
61475	Aia2	Adjuvant induced arthritis QTL 2	5.8		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	40471453	75939996	Rat
8694439	Bw168	Body weight QTL 168	9.57	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	4	41400603	86400603	Rat
8655906	Rf60	Renal function QTL 60	3.8		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	4	30448961	82336920	Rat
1641919	Alc22	Alcohol consumption QTL 22		0.0005	drinking behavior trait (VT:0001422)	ethanol drink intake rate (CMO:0001407)	4	65060960	127749483	Rat
2317577	Eae24	Experimental allergic encephalomyelitis QTL 24			nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	4	67960112	73752811	Rat
1354660	Salc1	Saline consumption QTL 1	11.26		drinking behavior trait (VT:0001422)	saline drink intake rate (CMO:0001627)	4	45429897	149763204	Rat
1298082	Stresp4	Stress response QTL 4			blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	4	51085655	113588029	Rat
2317588	Eae27	Experimental allergic encephalomyelitis QTL 27			nervous system integrity trait (VT:0010566)	percentage of study population developing experimental autoimmune encephalomyelitis during a period of time (CMO:0001047)	4	69036742	114036742	Rat
1300139	Hrtrt6	Heart rate QTL 6	2.85		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	4	40490442	117737312	Rat
70200	Alc18	Alcohol consumption QTL 18	9.2		drinking behavior trait (VT:0001422)	ethanol intake volume to total fluid intake volume ratio (CMO:0001591)	4	57613339	151163960	Rat
4889969	Bss96	Bone structure and strength QTL 96	4.9		tibia size trait (VT:0100001)	tibia cortical bone volume (CMO:0001725)	4	57613242	102613242	Rat
2316958	Gluco58	Glucose level QTL 58	10		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	12212457	182430611	Rat
4889972	Bss97	Bone structure and strength QTL 97	5.6		tibia size trait (VT:0100001)	tibia total bone volume (CMO:0001724)	4	57613242	102613242	Rat
6478684	Anxrr30	Anxiety related response QTL 30		0.00087	defecation behavior trait (VT:0010462)	defecation rate (CMO:0000998)	4	64084079	109084079	Rat
5685012	Bmd87	Bone mineral density QTL 87	5.1		tibia mineral mass (VT:1000283)	bone mineral content (CMO:0001554)	4	35113290	80113290	Rat
5685009	Bmd86	Bone mineral density QTL 86	3.7		tibia mineral mass (VT:1000283)	bone mineral density (CMO:0001226)	4	57613242	102613242	Rat
1331807	Rf31	Renal function QTL 31	2.988		urine potassium amount (VT:0010539)	urine potassium level (CMO:0000128)	4	40490442	75726188	Rat
634311	Sach7	Saccharin preference QTL 7			taste sensitivity trait (VT:0001986)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	4	58079875	82597589	Rat
2306547	Iddm38	Insulin dependent diabetes mellitus QTL 38			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	68353567	113353567	Rat
738009	Sach4	Saccharine consumption QTL 4	4.9	0.000016	consumption behavior trait (VT:0002069)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	4	60916264	184426481	Rat
631261	Tcas3	Tongue tumor susceptibility QTL 3	6.88		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	4	11706604	92690519	Rat
6478772	Anxrr49	Anxiety related response QTL 49		0.15488	defecation behavior trait (VT:0010462)	defecation rate (CMO:0000998)	4	64084079	109084079	Rat
2312569	Pur19	Proteinuria QTL 19	3.4	0.001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	4	59836842	104836842	Rat
8655961	Kidm43	Kidney mass QTL 43	18		kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	4	37269577	82269577	Rat
1354612	Foco1	Food consumption QTL 1	8.87		eating behavior trait (VT:0001431)	food intake rate (CMO:0000427)	4	45429897	149763204	Rat
634344	Hcar7	Hepatocarcinoma resistance QTL 7	7.8		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	4	61041057	94638356	Rat
2303168	Bp330	Blood pressure QTL 330	4.25	0.017	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	4	5889999	148002343	Rat
738031	Alc14	Alcohol consumption QTL 14	7.6	0.00003	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	60916264	174095838	Rat
1576305	Emca6	Estrogen-induced mammary cancer QTL 6	5.8		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	4	45429709	157555683	Rat
61418	Pia5	Pristane induced arthritis QTL 5	4.5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	63245026	129846354	Rat
631651	Bp124	Blood pressure QTL 124	3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	64209744	109209744	Rat
738016	Alc16	Alcohol consumption QTL 16	3.6	0.00015	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	60916264	184426481	Rat
1558651	Swd3	Spike wave discharge measurement QTL 3	4.62	0.000024	brain electrophysiology trait (VT:0010557)	brain spike-and-wave discharge frequency (CMO:0001742)	4	41400577	86400577	Rat
1641833	Alc21	Alcohol consumption QTL 21	8.6	0.0001	drinking behavior trait (VT:0001422)	ethanol drink intake rate (CMO:0001407)	4	57664252	127749483	Rat
631546	Bp86	Blood pressure QTL 86	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	58079875	92690793	Rat
631674	Iddm14	Insulin dependent diabetes mellitus QTL 14			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	4	65495851	159259805	Rat
6478743	Anxrr40	Anxiety related response QTL 40		0.83076	defecation behavior trait (VT:0010462)	defecation rate (CMO:0000998)	4	64084079	109084079	Rat
61434	Cia3	Collagen induced arthritis QTL 3	4.8		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	63224393	108224393	Rat
7394826	Bw126	Body weight QTL 126		0.002	body mass (VT:0001259)	body weight gain (CMO:0000420)	4	63900458	88813920	Rat
12798520	Anxrr55	Anxiety related response QTL 55	4.45	0.01	locomotor behavior trait (VT:0001392)	number of rearing movements with lid-pushing in an experimental apparatus (CMO:0002715)	4	33538597	116185060	Rat
631671	Iddm11	Insulin dependent diabetes mellitus QTL 11	3.6	0.0012	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	4	59603319	80216952	Rat

Markers in Region

RH129621

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	70,507,017 - 70,507,219 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	70,918,302 - 70,918,503	NCBI	Rnor6.0
Rnor_5.0	4	135,705,367 - 135,705,568	UniSTS	Rnor5.0
RGSC_v3.4	4	69,331,644 - 69,331,845	UniSTS	RGSC3.4
Celera	4	65,472,069 - 65,472,270	UniSTS
RH 3.4 Map	4	419.81	UniSTS
Cytogenetic Map	4	q22	UniSTS

UniSTS:495891

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	70,500,134 - 70,500,958 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	70,911,419 - 70,912,242	NCBI	Rnor6.0
Rnor_5.0	4	135,698,484 - 135,699,307	UniSTS	Rnor5.0
RGSC_v3.4	4	69,324,761 - 69,325,584	UniSTS	RGSC3.4
Celera	4	65,465,186 - 65,466,009	UniSTS
Cytogenetic Map	4	q22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	152	91	90	59	92	59	6	356	192	11	131	81	92	31	12	12

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107857	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC109737	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473959	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000019720 ⟹ ENSRNOP00000019720

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	71,458,971 - 71,476,659 (+)	Ensembl
mRatBN7.2 Ensembl	4	70,491,973 - 70,507,230 (+)	Ensembl
Rnor_6.0 Ensembl	4	70,903,253 - 70,918,514 (+)	Ensembl

RefSeq Acc Id:

NM_001107857 ⟹ NP_001101327

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	71,458,632 - 71,473,889 (+)	NCBI
mRatBN7.2	4	70,491,973 - 70,507,230 (+)	NCBI
Rnor_6.0	4	70,903,253 - 70,918,514 (+)	NCBI
Rnor_5.0	4	135,690,323 - 135,705,579 (+)	NCBI
RGSC_v3.4	4	69,316,600 - 69,331,856 (+)	RGD
Celera	4	65,457,027 - 65,472,281 (+)	RGD

Sequence:

show sequence

GATGCTCCGGCGCGAGCTACAGGATTTTAAACACGCCTTGCAGCGGCGCCCACTGGCCACCTCC
TCCCGGACCCTAACTCGTGCAGTCCTTCTGCCCACGTCCCCTCCGCCCGCCAGGACCCACGGGA
GGAGGCCGACCCTCCTCAGCACACAGGCGGGCCCAGGGCGCGCCCAGCATCTCCACTGCACGCC
CCGCTGGGGATCGGGCGCCGCGCACTTGGGTCCTAGGCCCAGAGGGCGGGCTCGGCTCCCGGAA
GAGGAGAGCCAGGGCGGCAGAAGGGGCCGGAGAGGGGCGGGCCAGGCTGGGAGGGACGAGAGGG
GGCGGGCCCGGCTGCGTTTGCCCAGCCAGCGCTTCGGAGCAGCGGGCGTCCGAACCCAAGAGCA
GAGCTCAGCGACTCCGATCGTGACACCGGCCCCCGCACGATTCCCCAGGGCCCCGCCTAGGGAG
CAGTCCCTGCTTGCAGCCTCGGGTCCTCTCCCAGAATCCCAGAGACTCCAAGCTGCGAGCAGAC
GCGGGCCGCTGGGAAGCGAGGTCCTCAGACCAGAGAGGACACGCGCGACGCTAGGAAAGATCTG
CGAGGTGCAGATCCACCGCGGGGGCCTCGGGGGCGCAGACCTGCAGAGCTGGAGGCCGGCGGGA
AGGTTGGCTGCTGGAGGACAGGTGCAGAGTAAATGAAGAGCTCAAACTGGAATAACTCCTTCCA
GACACAAAGGGAAACAAGCTTGTCTGTAGACAACGGGTCTTCCGAAAACCACAGCTGCGCCTCA
GAACAGGGCAGTGGCCGAGGCAATGGTGGGAGTGCCGAAGACACCGCATGGCTTCTGAGAACAC
GGCTGGGTCAGGGAGCAGAGTGGCGGGCATGGTGTACAGTCTATGGCTCCTGGTTCTGGGGCCC
TCAGTTCTAGCTCTGGAAGAGGTGCTGCTGGATACCACAGGAGAGACCTCTGAGATTGGCTGGC
TCACCTACCCACCAGGTGGGTGGGATGAGGTGAGTGTTCTAGACGACCAGCGCCGTCTGACTCG
GACCTTCGAAGCATGCCACGTCGCAGGGCTCCCTCCCGGTTCTGGGCAGGACAATTGGCTACAG
ACACACTTTGTGGAGCGGCGAGGGGCCCAGAGGGCACACATCCGTCTTCACTTCTCTGTGCGAG
CCTGTTCCAGCCTGGGCGTGAGTGGAGGTACCTGCCGAGAGACCTTCACCCTTTACTACCGGCA
GGCTGATGAACCAGACAGCCCTGACAGTATTTCGGCCTGGCACCTCAAACGCTGGACCAAAGTG
GACACAATCGCAGCAGATGAGAGCTTCCCTGCCTCCTCTTCCTCTTCCTCCTGGGCTGTGGGAC
CCCACAGGACTGATCAGCGGGTGGGACTGCAGCTGAATGTCAAAGAGCGCAGTTTTGGTCCTCT
CACTCAGCGTGGCTTCTACGTGGCCTTCCAGGACACAGGGGCCTGCCTGGCCCTTGTAGCAGTC
AAGCTCTTCTCCTATACCTGTCCCTCCGTCCTGCGCGCCTTTGCCTCTTTTCCTGAGACACAGG
CCAGCGGAGCTGGAGGTGCCTCCTTAGTAGCTGCTGTGGGCACCTGTGTAGCTCATGCGGAACC
CGAGGAGGATGGCGTAGGAGGCCAGGCAGGGGGCAGCCCACCAAGGTTACACTGTAATGGGGAA
GGAAGGTGGATGGTAGCTGTGGGAGGCTGTCGCTGCCAGCCTGGACACCAGCCTGCTCGTGGAG
ACAAGCTCTGCCAAGCCTGCCCTGAGGGGTCCTATAAGGCACTGCCTGGAAATGTCCCCTGCTC
ACCGTGTCCAGCCCGCAGCCACTCCCCTGACCCTGCAGCCCCAGTTTGTCCCTGTCTCCAAGGT
TTCTACAGGGCCAGTTCTGACCCACCAGAGGCTCCCTGCACTGGTCCTCCATCAGCTCCCCGGG
AGCTTTGGTTTGAGGTTCAAGGCTCAGCACTTATGCTGCACTGGCGCCTGCCTCAGGAGCTGGG
CGGACGAGGGGACCTGCTCTTCAATGTTGTGTGCAAGGAATGTGGAGGTCACAAGGAGCCCAGC
AGTGGGGGAATGTGTCGCCGCTGCAGGGATGAGGTGCATTTCGACCCCCGCCAGAGGGGCCTGA
CCGAGAGTCGAGTGTTAGTTGGTGGGCTCCGAGCACACGTGCCATACATCTTGGAAGTGCAGGC
TGTCAATGGGGTGTCTGAGCTCAGCCCTGACCCTCCCCAGGCAGCAGCCATCAATGTCAGCACC
AGCCATGAAGTTCCTTCTGCAGTCCCTGTGATGCACCAGGTGAGCCGGGCCGCCAACAGCATCA
CAGTGTCCTGGCCACAGCCTGAACAAACAAATGGAAACATCCTTGACTATCAGCTGCGCTACTA
TGACCAGGCAGAAGATGAATCCCACTCCTTCACCATGACCAGTGAGACTAACACTGCCACTGTG
ACACGGTTGAGCCCTGGCCACATTTATGGCTTCCAGGTTCGAGCACGGACTGCGGCTGGCCATG
GCCCCTATGGGGGCAAAGTCTATTTTCAGACACTGCCTCAAGGTGAGCTGTCCTCCCAGCTTCC
AGAGAAGCTGTCCTTGGTGATTGGTTCCATCCTGGGGGCCTTGGCCTTCCTTCTACTGGCAGCC
ATCACTGTACTGGCTGTCATCTTCCAGCGGAAGCGGCGTGGGACCGGCTACACAGAACAACTGC
AACAGTACAGCAGCCCAGGACTTGGAGTGAAGTATTACATTGACCCTTCCACGTATGACGACCC
CTGCCAGGCCATCAGAGAGCTTGCTCGAGAGGTTGACCCTACATATATCAAGATTGAGGAAGTC
ATTGGGGCAGGTTCCTTTGGAGAAGTGCGTCGGGGCCGACTGCAACCCCGGGGAAGGCGGGAAC
AGGCTGTGGCTATCCAGGCCCTGTGGGCAGGGGGTGCTGAGAGCCTGAAGATGACCTTTCTGGG
TCGGGCAGCCCTGCTGGGCCAGTTCCAGCACCCCAATATCCTGCGCCTGGAAGGTGTAGTCACT
AGGAGTCGGCCTGTCATGGTGCTGACAGAACTCATGGAGCTTGGTCCCCTGGACAGCTTCCTTA
GGCAGCGAGAGGGCCAGTTCAGTAGCCTGCAGCTGGTGGCCATGCAGCGGGGTGTGGCTGCTGC
CATGCAGTACCTGTCCAGCTTTGCCTTTGTTCACCGAGCACTCTCAGCCCGAAGTGTGCTAGTG
AATAGCCACCTGGTGTGTAAGGTGGCCCGTCTTGGCCACAGTCCTCAGGGTTCAAGTTCCTTGC
TTCGCTGGGCAGCCCCAGAGGTCATCACACACGGGAAGTACACAACATCTAGCGATGTCTGGAG
CTTTGGCATACTCATGTGGGAAGTGATGAGCTATGGAGAACGGCCCTACTGGGACATGAGTGAC
CAGGAGGTACTAAATGCGATAGAGCAAGAGTTCCGGCTGCCCCCACCTCCGGGGTGCCCTACTG
GACTACATCTGCTGATGCTAGACACTTGGCAGAAGGACCGTGCCCGTCGGCCTCACTTTGACCA
GCTCGTAGCCGCGTTTGACAAGATGATACGCAAGCCTGATACCCTCCAGGCTGAAGGGAGCTCC
GGGGACAGGCCTTCCCAGGCTCTTCTGAACCCTGTGGCCTTGGACTTTCCTTGCCTGGACTCTC
CCCAGGCCTGGCTTTCAGCCATTGGACTAGAGTGCTACCAGGACAACTTCTCTAAGTTTGGTCT
TTCCACCTTCAGTGATGTGGCTCAGCTCAGCCTTGAAGACCTGCCAGGCCTGGGCATCACCCTA
GCTGGCCACCAGAAGAAACTACTGCATAACATCCAGCTCCTCCAGCAGCACCTGAGGCAGCCAG
GCTCGGTGGAAGTGTAAAGCCTGGTCAGCAATCTGTGAGCTGCCGCTGATGCCCCAACCCAGCC
CTGGCCATAGGGTGGAGGAGGGGCGTGTGAGACTGAGCCAGACTCTATTCCAGCCTCCATGCCT
GCCACATTAAACCCAGCCCTCTGGACATTGCACCCCCAAATCCTGCTCTTCCAACAGCCTCCCC
CATATTAAAGGGAAAGAAGGGAATTTATAAGTTG

hide sequence

Protein Sequences


Protein RefSeqs	NP_001101327	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM15483	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000019720
	ENSRNOP00000019720.4
GenBank Protein	P0C0K7	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001101327 ⟸ NM_001107857
- Peptide Label:	precursor
- UniProtKB:	P0C0K7 (UniProtKB/Swiss-Prot), A6IF46 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASENTAGSGSRVAGMVYSLWLLVLGPSVLALEEVLLDTTGETSEIGWLTYPPGGWDEVSVLDD QRRLTRTFEACHVAGLPPGSGQDNWLQTHFVERRGAQRAHIRLHFSVRACSSLGVSGGTCRETF TLYYRQADEPDSPDSISAWHLKRWTKVDTIAADESFPASSSSSSWAVGPHRTDQRVGLQLNVKE RSFGPLTQRGFYVAFQDTGACLALVAVKLFSYTCPSVLRAFASFPETQASGAGGASLVAAVGTC VAHAEPEEDGVGGQAGGSPPRLHCNGEGRWMVAVGGCRCQPGHQPARGDKLCQACPEGSYKALP GNVPCSPCPARSHSPDPAAPVCPCLQGFYRASSDPPEAPCTGPPSAPRELWFEVQGSALMLHWR LPQELGGRGDLLFNVVCKECGGHKEPSSGGMCRRCRDEVHFDPRQRGLTESRVLVGGLRAHVPY ILEVQAVNGVSELSPDPPQAAAINVSTSHEVPSAVPVMHQVSRAANSITVSWPQPEQTNGNILD YQLRYYDQAEDESHSFTMTSETNTATVTRLSPGHIYGFQVRARTAAGHGPYGGKVYFQTLPQGE LSSQLPEKLSLVIGSILGALAFLLLAAITVLAVIFQRKRRGTGYTEQLQQYSSPGLGVKYYIDP STYDDPCQAIRELAREVDPTYIKIEEVIGAGSFGEVRRGRLQPRGRREQAVAIQALWAGGAESL KMTFLGRAALLGQFQHPNILRLEGVVTRSRPVMVLTELMELGPLDSFLRQREGQFSSLQLVAMQ RGVAAAMQYLSSFAFVHRALSARSVLVNSHLVCKVARLGHSPQGSSSLLRWAAPEVITHGKYTT SSDVWSFGILMWEVMSYGERPYWDMSDQEVLNAIEQEFRLPPPPGCPTGLHLLMLDTWQKDRAR RPHFDQLVAAFDKMIRKPDTLQAEGSSGDRPSQALLNPVALDFPCLDSPQAWLSAIGLECYQDN FSKFGLSTFSDVAQLSLEDLPGLGITLAGHQKKLLHNIQLLQQHLRQPGSVEV hide sequence

Ensembl Acc Id:

ENSRNOP00000019720 ⟸ ENSRNOT00000019720

Protein Domains

Eph LBD Fibronectin type-III Protein kinase SAM

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P0C0K7-F1-model_v2	AlphaFold	P0C0K7	1-1013	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13693002

Promoter ID:

EPDNEW_R3525

Type:

single initiation site

Name:

Ephb6_1

Description:

Eph receptor B6

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	4	70,903,154 - 70,903,214	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306163	AgrOrtholog
BioCyc Gene	G2FUF-45110	BioCyc
Ensembl Genes	ENSRNOG00000014367	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000019720	ENTREZGENE
	ENSRNOT00000019720.6	UniProtKB/Swiss-Prot
Gene3D-CATH	1.10.150.50	UniProtKB/Swiss-Prot
	2.60.40.10	UniProtKB/Swiss-Prot
	ephrin a2 ectodomain	UniProtKB/Swiss-Prot
	Galactose-binding domain-like	UniProtKB/Swiss-Prot
	Phosphorylase Kinase, domain 1	UniProtKB/Swiss-Prot
	Transferase(Phosphotransferase) domain 1	UniProtKB/Swiss-Prot
	Tumor Necrosis Factor Receptor, subunit A, domain 2	UniProtKB/Swiss-Prot
InterPro	Eph_TM	UniProtKB/Swiss-Prot
	Ephrin_rcpt_lig-bd_dom	UniProtKB/Swiss-Prot
	Ephrin_rcpt_TKs	UniProtKB/Swiss-Prot
	FN3_dom	UniProtKB/Swiss-Prot
	FN3_sf	UniProtKB/Swiss-Prot
	Galactose-bd-like_sf	UniProtKB/Swiss-Prot
	Ig-like_fold	UniProtKB/Swiss-Prot
	Kinase-like_dom_sf	UniProtKB/Swiss-Prot
	Prot_kinase_dom	UniProtKB/Swiss-Prot
	SAM	UniProtKB/Swiss-Prot
	SAM/pointed_sf	UniProtKB/Swiss-Prot
	Ser-Thr/Tyr_kinase_cat_dom	UniProtKB/Swiss-Prot
	Tyr-kin_ephrin_A/B_rcpt-like	UniProtKB/Swiss-Prot
	Tyr_kinase_ephrin_rcpt	UniProtKB/Swiss-Prot
	Tyr_kinase_rcpt_V_CS	UniProtKB/Swiss-Prot
KEGG Report	rno:312275	UniProtKB/Swiss-Prot
NCBI Gene	312275	ENTREZGENE
PANTHER	EPH RECEPTOR A5	UniProtKB/Swiss-Prot
	EPHRIN TYPE-B RECEPTOR 6	UniProtKB/Swiss-Prot
Pfam	EphA2_TM	UniProtKB/Swiss-Prot
	Ephrin_lbd	UniProtKB/Swiss-Prot
	Ephrin_rec_like	UniProtKB/Swiss-Prot
	fn3	UniProtKB/Swiss-Prot
	Pkinase_Tyr	UniProtKB/Swiss-Prot
	SAM_2	UniProtKB/Swiss-Prot
PhenoGen	Ephb6	PhenoGen
PIRSF	TyrPK_ephrin_receptor	UniProtKB/Swiss-Prot
PRINTS	FNTYPEIII	UniProtKB/Swiss-Prot
	TYRKINASE	UniProtKB/Swiss-Prot
PROSITE	EPH_LBD	UniProtKB/Swiss-Prot
	FN3	UniProtKB/Swiss-Prot
	PROTEIN_KINASE_DOM	UniProtKB/Swiss-Prot
	RECEPTOR_TYR_KIN_V_1	UniProtKB/Swiss-Prot
	RECEPTOR_TYR_KIN_V_2	UniProtKB/Swiss-Prot
	SAM_DOMAIN	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000014367	RatGTEx
SMART	EPH_lbd	UniProtKB/Swiss-Prot
	Ephrin_rec_like	UniProtKB/Swiss-Prot
	FN3	UniProtKB/Swiss-Prot
	SAM	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF47769	UniProtKB/Swiss-Prot
	SSF49265	UniProtKB/Swiss-Prot
	SSF49785	UniProtKB/Swiss-Prot
	SSF56112	UniProtKB/Swiss-Prot
UniProt	A6IF46	ENTREZGENE, UniProtKB/TrEMBL
	EPHB6_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-07-29	Ephb6	Eph receptor B6	LOC102554290	serine/arginine repetitive matrix protein 2-like	Data merged from RGD:7668952	737654	PROVISIONAL
2013-12-18	LOC102554290	serine/arginine repetitive matrix protein 2-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2005-12-06	Ephb6	Eph receptor B6	Ephb6_predicted	Eph receptor B6 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Ephb6_predicted	Eph receptor B6 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar