Ovol2 (ovo-like zinc finger 2) - Rat Genome Database

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Gene: Ovol2 (ovo-like zinc finger 2) Rattus norvegicus
Analyze
Symbol: Ovol2
Name: ovo-like zinc finger 2
RGD ID: 1306130
Description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and chromatin binding activity. Predicted to be involved in several processes, including negative regulation of cell differentiation; negative regulation of signal transduction; and regulation of gene expression. Predicted to act upstream of or within several processes, including circulatory system development; positive regulation of keratinocyte differentiation; and tube morphogenesis. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in posterior polymorphous corneal dystrophy 1. Orthologous to human OVOL2 (ovo like zinc finger 2); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; copper atom.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC296201; ovo-like 2; ovo-like 2 (Drosophila); transcription factor Ovo-like 2; Zfp339; zinc finger protein 339
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83152,130,767 - 152,160,487 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3152,130,767 - 152,160,487 (-)EnsemblGRCr8
mRatBN7.23131,677,391 - 131,707,123 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3131,677,391 - 131,708,359 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3135,601,228 - 135,630,393 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03144,185,320 - 144,214,479 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03141,888,510 - 141,917,671 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03138,433,990 - 138,464,511 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3138,433,990 - 138,462,063 (-)Ensemblrn6Rnor6.0
Rnor_5.03144,867,735 - 144,898,199 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43132,842,267 - 132,871,206 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3130,572,320 - 130,601,420 (-)NCBICelera
RGSC_v3.13132,747,836 - 132,777,519 (-)NCBI
Cytogenetic Map3q41NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
angiogenesis  (ISO)
dorsal/ventral pattern formation  (ISO)
embryonic digestive tract morphogenesis  (ISO)
endocardium formation  (ISO)
epidermal cell differentiation  (IBA,IEA,ISO)
epidermis development  (ISO)
heart development  (ISO)
heart looping  (ISO)
heart trabecula formation  (ISO)
labyrinthine layer blood vessel development  (ISO)
negative regulation of cell differentiation  (IEA)
negative regulation of cell population proliferation  (ISO)
negative regulation of DNA-templated transcription  (IEA,ISO)
negative regulation of epithelial to mesenchymal transition  (IEA,ISO)
negative regulation of gene expression  (IEA,ISO)
negative regulation of keratinocyte differentiation  (ISO)
negative regulation of multicellular organismal process  (IEA)
negative regulation of Notch signaling pathway  (ISO)
negative regulation of signal transduction  (IEA)
negative regulation of SMAD protein signal transduction  (IEA,ISO)
negative regulation of stem cell proliferation  (IEA,ISO)
negative regulation of transcription by competitive promoter binding  (ISO)
negative regulation of transcription by RNA polymerase II  (IEA)
negative regulation of transforming growth factor beta receptor signaling pathway  (IEA,ISO)
neural crest cell migration  (ISO)
neural fold formation  (ISO)
positive regulation of DNA-templated transcription  (ISO)
positive regulation of gene expression  (IEA,ISO)
positive regulation of keratinocyte differentiation  (ISO)
positive regulation of transcription by RNA polymerase II  (IEA)
regulation of cell cycle  (ISO)
regulation of keratinocyte differentiation  (IEA)
regulation of keratinocyte proliferation  (IEA,ISO)
regulation of transcription by RNA polymerase II  (IBA)

Cellular Component
nucleus  (IBA,IEA,ISO)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9468311   PMID:15225875   PMID:16423343   PMID:17049212   PMID:17573777   PMID:19700410   PMID:24735878   PMID:24735879   PMID:28455959  


Genomics

Comparative Map Data
Ovol2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83152,130,767 - 152,160,487 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3152,130,767 - 152,160,487 (-)EnsemblGRCr8
mRatBN7.23131,677,391 - 131,707,123 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3131,677,391 - 131,708,359 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3135,601,228 - 135,630,393 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03144,185,320 - 144,214,479 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03141,888,510 - 141,917,671 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03138,433,990 - 138,464,511 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3138,433,990 - 138,462,063 (-)Ensemblrn6Rnor6.0
Rnor_5.03144,867,735 - 144,898,199 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43132,842,267 - 132,871,206 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3130,572,320 - 130,601,420 (-)NCBICelera
RGSC_v3.13132,747,836 - 132,777,519 (-)NCBI
Cytogenetic Map3q41NCBI
OVOL2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382018,024,152 - 18,059,188 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2017,956,979 - 18,059,188 (-)Ensemblhg38GRCh38
GRCh372018,004,796 - 18,039,832 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362017,952,796 - 17,986,521 (-)NCBIBuild 36Build 36hg18NCBI36
Build 342017,952,795 - 17,986,521NCBI
Celera2018,079,347 - 18,113,079 (-)NCBICelera
Cytogenetic Map20p11.23NCBI
HuRef2017,967,242 - 18,001,367 (-)NCBIHuRef
CHM1_12018,004,853 - 18,038,551 (-)NCBICHM1_1
T2T-CHM13v2.02018,075,263 - 18,110,299 (-)NCBIT2T-CHM13v2.0
Ovol2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392144,147,095 - 144,174,000 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2144,147,095 - 144,174,066 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm382144,305,175 - 144,332,080 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2144,305,175 - 144,332,146 (-)Ensemblmm10GRCm38
MGSCv372144,130,911 - 144,157,816 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv362143,996,616 - 144,023,521 (-)NCBIMGSCv36mm8
Celera2145,493,569 - 145,520,509 (-)NCBICelera
Cytogenetic Map2G1NCBI
cM Map270.99NCBI
Ovol2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541526,825,284 - 26,843,438 (-)Ensembl
ChiLan1.0NW_00495541526,825,284 - 26,843,438 (-)NCBIChiLan1.0ChiLan1.0
OVOL2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22118,914,381 - 18,950,868 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12018,911,219 - 18,947,699 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02017,983,277 - 18,019,441 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12017,961,749 - 17,996,364 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2017,962,123 - 17,994,486 (-)EnsemblpanPan2panpan1.1
OVOL2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1245,020,608 - 5,050,487 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl245,020,813 - 5,050,309 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha244,949,757 - 4,980,761 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0245,427,079 - 5,458,074 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl245,428,834 - 5,457,893 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1245,039,068 - 5,070,261 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0245,133,467 - 5,164,662 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0245,409,939 - 5,440,959 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Ovol2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640153,663,620 - 153,696,671 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364852,096,495 - 2,128,540 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364852,096,495 - 2,128,002 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
OVOL2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1726,417,795 - 26,451,928 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11726,417,793 - 26,451,707 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21729,918,120 - 29,956,051 (+)NCBISscrofa10.2Sscrofa10.2susScr3
OVOL2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1247,082,294 - 47,118,880 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl247,082,167 - 47,117,521 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660781,750,940 - 1,797,786 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ovol2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474118,995,246 - 19,012,910 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474118,994,689 - 19,012,381 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Ovol2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v15123,950,491 - 123,980,523 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Ovol2
225 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:199
Count of miRNA genes:151
Interacting mature miRNAs:161
Transcripts:ENSRNOT00000065553
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
12879876Bw182Body weight QTL 1820.003body mass (VT:0001259)body weight (CMO:0000012)3141555229186555229Rat
2301411Bp320Blood pressure QTL 3200.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3141555229186555229Rat
1582233Insul10Insulin level QTL 105.40.0015blood insulin amount (VT:0001560)serum insulin level times blood glucose level (CMO:0002040)3133259579178259579Rat
12879872Cm97Cardiac mass QTL 970.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)3141555229186555229Rat
12879873Cm96Cardiac mass QTL 960.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)3141555229186555229Rat
1578653Vnigr3Vascular neointimal growth QTL 33.1artery morphology trait (VT:0002191)artery neointimal hyperplastic lesion area (CMO:0001414)3151075912189428310Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)3129154923182114333Rat
12879874Cm98Cardiac mass QTL 980.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)3141555229186555229Rat
12879875Kidm64Kidney mass QTL 640.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)3141555229186555229Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)351581665184004958Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)367641776167835660Rat
1358362Srcrt2Stress Responsive Cort QTL 22.78blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)358601291153936591Rat
1578754Stresp16Stress response QTL 1640.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)3133134628178134628Rat
1300173Rf11Renal function QTL 113.38renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)3141508991166376254Rat
9589106Insul23Insulin level QTL 2313.860.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)3152055202189428310Rat
8694437Bw167Body weight QTL 16722.460.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)3112250810157250810Rat
10755461Coatc16Coat color QTL 16coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)3142898802187898802Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)379649560177741895Rat
1559282Emca5Estrogen-induced mammary cancer QTL 53.9mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)3145335553189428310Rat
1354611Despr2Despair related QTL 23.030.0028locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)3117537367162537367Rat
2303620Vencon4Ventilatory control QTL 43.9respiration trait (VT:0001943)tidal volume (CMO:0000222)3125116475170116475Rat
631649Bp123Blood pressure QTL 1233.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3110225882155225882Rat
1358204Insglur1Insulin/glucose ratio QTL 13.8blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)3136091420155634702Rat
1576306Schws3Schwannoma susceptibility QTL 30.001nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)3139299381184299381Rat
5686842Rf59Renal function QTL 59urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)3122395989167395989Rat
1300159Kidm4Kidney mass QTL 43.83kidney mass (VT:0002707)right kidney wet weight to body weight ratio (CMO:0001953)3141508991177728348Rat
2301971Cm71Cardiac mass QTL 714.63heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)3131036586176036586Rat
631673Iddm13Insulin dependent diabetes mellitus QTL 131.30.663blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)3137114333182114333Rat
2301970Bw81Body weight QTL 815.19body mass (VT:0001259)body weight (CMO:0000012)3131036586176036586Rat
1581546Pur13Proteinuria QTL 132.930.0335urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)398651826167012663Rat
1578666Vnigr1Vascular neointimal growth QTL 14.6artery morphology trait (VT:0002191)artery lumen area (CMO:0001409)3151075912189428310Rat
1578656Vnigr2Vascular neointimal growth QTL 24.2artery morphology trait (VT:0002191)lesioned artery residual lumen area (CMO:0001417)3151075912189428310Rat
1331758Bp207Blood pressure QTL 2072.848arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3110634702155634702Rat
12879871Am7Aortic mass QTL 70.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)3141555229186555229Rat
631541Bp81Blood pressure QTL 814arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3144575244189428310Rat
724532Cm17Cardiac mass QTL 172heart mass (VT:0007028)calculated heart weight (CMO:0000073)3116188400161188400Rat

Markers in Region
BI274732  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23131,677,450 - 131,677,649 (+)MAPPERmRatBN7.2
Rnor_6.03138,434,050 - 138,434,248NCBIRnor6.0
Rnor_5.03144,867,795 - 144,867,993UniSTSRnor5.0
RGSC_v3.43132,842,327 - 132,842,525UniSTSRGSC3.4
Celera3130,572,380 - 130,572,578UniSTS
RH 3.4 Map31180.4UniSTS
Cytogenetic Map3q41UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 4 13 65 64 76 45 32 45 6 194 49 3 56 81 92 31 1 1

Sequence


Ensembl Acc Id: ENSRNOT00000065553   ⟹   ENSRNOP00000061477
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3152,130,767 - 152,159,785 (-)Ensembl
mRatBN7.2 Ensembl3131,677,391 - 131,706,404 (-)Ensembl
Rnor_6.0 Ensembl3138,433,990 - 138,462,063 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000095528   ⟹   ENSRNOP00000090135
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3152,130,767 - 152,160,487 (-)Ensembl
mRatBN7.2 Ensembl3131,677,391 - 131,708,359 (-)Ensembl
RefSeq Acc Id: NM_001106519   ⟹   NP_001099989
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83152,130,767 - 152,159,785 (-)NCBI
mRatBN7.23131,677,391 - 131,706,421 (-)NCBI
Rnor_6.03138,433,990 - 138,462,063 (-)NCBI
Rnor_5.03144,867,735 - 144,898,199 (-)NCBI
RGSC_v3.43132,842,267 - 132,871,206 (-)RGD
Celera3130,572,320 - 130,601,420 (-)RGD
Sequence:
RefSeq Acc Id: NM_001415680   ⟹   NP_001402609
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83152,130,767 - 152,160,487 (-)NCBI
mRatBN7.23131,677,391 - 131,707,123 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001099989 (Get FASTA)   NCBI Sequence Viewer  
  NP_001402609 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL95168 (Get FASTA)   NCBI Sequence Viewer  
  EDL95169 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000061477
  ENSRNOP00000061477.1
  ENSRNOP00000090135
  ENSRNOP00000090135.1
RefSeq Acc Id: NP_001099989   ⟸   NM_001106519
- Peptide Label: isoform 2
- UniProtKB: D4A5U5 (UniProtKB/TrEMBL),   A6K751 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000061477   ⟸   ENSRNOT00000065553
Ensembl Acc Id: ENSRNOP00000090135   ⟸   ENSRNOT00000095528
RefSeq Acc Id: NP_001402609   ⟸   NM_001415680
- Peptide Label: isoform 1
- UniProtKB: A0A8I6GIM7 (UniProtKB/TrEMBL),   A6K750 (UniProtKB/TrEMBL)
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4A5U5-F1-model_v2 AlphaFold D4A5U5 1-241 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306130 AgrOrtholog
BioCyc Gene G2FUF-47604 BioCyc
Ensembl Genes ENSRNOG00000006850 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000065553 ENTREZGENE
  ENSRNOT00000065553.3 UniProtKB/TrEMBL
  ENSRNOT00000095528 ENTREZGENE
  ENSRNOT00000095528.2 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro Ovo-like UniProtKB/TrEMBL
  Znf_C2H2/integrase_DNA-bd UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
KEGG Report rno:296201 UniProtKB/TrEMBL
NCBI Gene 296201 ENTREZGENE
PANTHER PTHR10032 UniProtKB/TrEMBL
  TRANSCRIPTION FACTOR OVO-LIKE 2 UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/TrEMBL
  zf-C2H2_4 UniProtKB/TrEMBL
  zf-C2H2_6 UniProtKB/TrEMBL
PhenoGen Ovol2 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000006850 RatGTEx
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt A0A8I6GIM7 ENTREZGENE, UniProtKB/TrEMBL
  A6K750 ENTREZGENE, UniProtKB/TrEMBL
  A6K751 ENTREZGENE, UniProtKB/TrEMBL
  D4A5U5 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-11-19 Ovol2  ovo-like zinc finger 2  Ovol2  ovo-like 2 (Drosophila)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-04 Ovol2  ovo-like 2 (Drosophila)  Zfp339_predicted  zinc finger protein 339 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-12 Zfp339_predicted  zinc finger protein 339 (predicted)      Symbol and Name status set to approved 70820 APPROVED