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Gene: Cep15 (centrosomal protein 15) Rattus norvegicus

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Symbol:

Cep15

Name:

centrosomal protein 15

RGD ID:

1306063

Description:

Orthologous to human CEP15 (centrosomal protein 15); INTERACTS WITH (+)-schisandrin B; 3,3',5-triiodo-L-thyronine; acrylamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

hypothetical protein LOC289928; LOC289928; RGD1306063; similar to HT021; uncharacterized protein C3orf14 homolog; uncharacterized protein LOC289928

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CEP15 (centrosomal protein 15)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Cep15 (centrosomal protein 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cep15 (centrosomal protein 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CEP15 (centrosomal protein 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CEP15 (centrosomal protein 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cep15 (centrosomal protein 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CEP15 (centrosomal protein 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CEP15 (centrosomal protein 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cep15 (centrosomal protein 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Cep15 (centrosomal protein 15)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Cep15 (centrosomal protein 15)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	CEP15 (centrosomal protein 15)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:dkey-274m17.3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	15,247,627 - 15,265,560 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	15	15,247,932 - 15,265,475 (-)	Ensembl				GRCr8
mRatBN7.2	15	12,815,159 - 12,835,115 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	12,818,385 - 12,833,838 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	15	14,947,101 - 14,963,772 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	15,905,554 - 15,922,225 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	14,160,353 - 14,177,024 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	12,869,217 - 12,889,144 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	12,872,408 - 12,889,108 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	15	16,899,627 - 16,916,353 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	15	14,395,450 - 14,412,116 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	15	12,815,624 - 12,832,290 (-)	NCBI		Celera
RGSC_v3.1	15	14,395,422 - 14,412,124 (-)	NCBI
Cytogenetic Map	15	p15	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

(-)-epigallocatechin 3-gallate (ISO)

17beta-estradiol (ISO)

3,3',5-triiodo-L-thyronine (EXP)

4-hydroxyphenyl retinamide (ISO)

acrylamide (EXP)

antirheumatic drug (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bis(2-chloroethyl) sulfide (ISO)

bisphenol A (EXP,ISO)

chromium(6+) (ISO)

cobalt dichloride (EXP)

coumestrol (ISO)

cyclosporin A (ISO)

dibutyl phthalate (EXP)

dorsomorphin (ISO)

finasteride (EXP)

fipronil (EXP)

flutamide (EXP)

gadodiamide hydrate (ISO)

gentamycin (EXP)

hydroquinone (ISO)

ketoconazole (ISO)

mitoxantrone (ISO)

potassium chromate (ISO)

progesterone (ISO)

rotenone (EXP)

SB 431542 (ISO)

sulindac (EXP)

sunitinib (ISO)

tetrachloromethane (EXP)

thioacetamide (EXP)

trichostatin A (ISO)

valproic acid (ISO)

vorinostat (ISO)

zinc atom (ISO)

zinc sulfate (ISO)

zinc(0) (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932

Genomics

Comparative Map Data

Cep15
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	15,247,627 - 15,265,560 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	15	15,247,932 - 15,265,475 (-)	Ensembl				GRCr8
mRatBN7.2	15	12,815,159 - 12,835,115 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	12,818,385 - 12,833,838 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	15	14,947,101 - 14,963,772 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	15,905,554 - 15,922,225 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	14,160,353 - 14,177,024 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	12,869,217 - 12,889,144 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	12,872,408 - 12,889,108 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	15	16,899,627 - 16,916,353 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	15	14,395,450 - 14,412,116 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	15	12,815,624 - 12,832,290 (-)	NCBI		Celera
RGSC_v3.1	15	14,395,422 - 14,412,124 (-)	NCBI
Cytogenetic Map	15	p15	NCBI

CEP15
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	62,319,022 - 62,336,213 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	62,319,015 - 62,336,213 (+)	Ensembl			hg38	GRCh38
GRCh37	3	62,304,697 - 62,321,888 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	62,280,436 - 62,294,361 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	3	62,280,435 - 62,294,361	NCBI
Celera	3	62,322,488 - 62,336,413 (+)	NCBI		Celera
Cytogenetic Map	3	p14.2	NCBI
HuRef	3	62,403,438 - 62,417,387 (+)	NCBI		HuRef
CHM1_1	3	62,256,503 - 62,270,432 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	62,362,532 - 62,379,727 (+)	NCBI		T2T-CHM13v2.0

Cep15
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	10,147,278 - 10,185,610 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	10,166,532 - 10,185,590 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm39 Ensembl	14	10,145,309 - 10,185,787 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	14	12,284,153 - 12,324,492 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	12,284,173 - 12,303,231 (+)	Ensembl			mm10	GRCm38
GRCm38.p6 Ensembl	14	12,283,976 - 12,324,454 (+)	Ensembl			mm10	GRCm38
MGSCv37	14	13,116,723 - 13,135,745 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	14	11,077,500 - 11,096,498 (+)	NCBI		MGSCv36	mm8
Celera	14	7,913,753 - 7,932,612 (+)	NCBI		Celera
Cytogenetic Map	14	A1	NCBI
cM Map	14	6.34	NCBI

Cep15
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955517	3,475,540 - 3,490,163 (-)	Ensembl
ChiLan1.0	NW_004955517	3,475,345 - 3,489,911 (-)	NCBI	ChiLan1.0	ChiLan1.0

CEP15
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	62,262,790 - 62,277,506 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	62,267,577 - 62,282,293 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	62,242,198 - 62,256,928 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	63,629,641 - 63,646,877 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	63,629,711 - 63,646,877 (+)	Ensembl			panPan2	panpan1.1

CEP15
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	28,744,910 - 28,759,706 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	28,745,182 - 28,759,397 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	28,673,315 - 28,687,937 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	28,979,947 - 28,994,577 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	28,980,029 - 28,994,249 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	28,465,625 - 28,480,242 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	28,823,579 - 28,838,199 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	28,923,635 - 28,938,262 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Cep15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	165,678,353 - 165,711,207 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936637	4,085,967 - 4,100,745 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936637	4,086,706 - 4,100,751 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CEP15
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	43,898,265 - 43,915,145 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	13	43,897,392 - 43,914,424 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	47,901,215 - 47,918,049 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CEP15
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	23,392,380 - 23,407,052 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	23,392,390 - 23,408,712 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666041	143,457,638 - 143,472,902 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cep15
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624888	3,501,027 - 3,515,041 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Cep15
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	12	82,354,225 - 82,374,131 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Cep15
74 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	31
Count of miRNA genes:	27
Interacting mature miRNAs:	31
Transcripts:	ENSRNOT00000061214
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1641913	Colcr2	Colorectal carcinoma resistance QTL 2	6.57	0.0197	intestine integrity trait (VT:0010554)	poorly differentiated malignant colorectal tumor number (CMO:0002076)	15	2315759	47315759	Rat
10401805	Kidm51	Kidney mass QTL 51			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	15	2785923	47785923	Rat
5684946	Bss98	Bone structure and strength QTL 98	3.9	0.0026	tibia strength trait (VT:1000284)	tibia ultimate force (CMO:0001734)	15	1	39411584	Rat
1354657	Despr13	Despair related QTL 13		0.0022	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	15	1	32342855	Rat
2317750	Glom26	Glomerulus QTL 26	4.3		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	15	14926594	71614418	Rat
1641887	Alcrsp14	Alcohol response QTL 14			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	15	1	44836456	Rat
738017	Hcas7	Hepatocarcinoma susceptibility QTL 7	2.91		liver integrity trait (VT:0010547)	liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)	15	2315759	53331089	Rat

Markers in Region

RH131113

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	15	12,833,020 - 12,833,204 (+)	MAPPER	mRatBN7.2
Rnor_6.0	15	12,887,075 - 12,887,258	NCBI	Rnor6.0
Rnor_5.0	15	16,914,294 - 16,914,477	UniSTS	Rnor5.0
RGSC_v3.4	15	14,410,089 - 14,410,272	UniSTS	RGSC3.4
Celera	15	12,830,263 - 12,830,446	UniSTS
RH 3.4 Map	15	110.42	UniSTS
Cytogenetic Map	15	p16	UniSTS

RH143598

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	15	12,830,608 - 12,830,711 (+)	MAPPER	mRatBN7.2
Rnor_6.0	15	12,884,663 - 12,884,765	NCBI	Rnor6.0
Rnor_5.0	15	16,911,882 - 16,911,984	UniSTS	Rnor5.0
RGSC_v3.4	15	14,407,677 - 14,407,779	UniSTS	RGSC3.4
Celera	15	12,827,851 - 12,827,953	UniSTS
RH 3.4 Map	15	108.6	UniSTS
Cytogenetic Map	15	p16	UniSTS

BE108434

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	15	12,824,773 - 12,824,960 (+)	MAPPER	mRatBN7.2
Rnor_6.0	15	12,878,828 - 12,879,014	NCBI	Rnor6.0
Rnor_5.0	15	16,906,047 - 16,906,233	UniSTS	Rnor5.0
RGSC_v3.4	15	14,401,842 - 14,402,028	UniSTS	RGSC3.4
Celera	15	12,822,016 - 12,822,202	UniSTS
RH 3.4 Map	15	108.9	UniSTS
Cytogenetic Map	15	p16	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001106026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001440084	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001440085	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006251730	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006251731	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006251732	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006251733	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006251736	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017599609	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039093086	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039093088	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274071	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274073	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274074	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274075	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274076	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274077	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274078	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274079	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274080	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063274081	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC083682	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC098950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC168755	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ221329	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000061214 ⟹ ENSRNOP00000057927

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	15	12,872,439 - 12,889,102 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000084687 ⟹ ENSRNOP00000069161

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	15	15,247,932 - 15,265,475 (-)	Ensembl
mRatBN7.2 Ensembl	15	12,818,385 - 12,833,838 (-)	Ensembl
Rnor_6.0 Ensembl	15	12,872,408 - 12,889,108 (-)	Ensembl

RefSeq Acc Id:

NM_001106026 ⟹ NP_001099496

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	15,248,809 - 15,265,475 (-)	NCBI
mRatBN7.2	15	12,818,382 - 12,835,048 (-)	NCBI
Rnor_6.0	15	12,872,436 - 12,889,102 (-)	NCBI
Rnor_5.0	15	16,899,627 - 16,916,353 (-)	NCBI
RGSC_v3.4	15	14,395,450 - 14,412,116 (-)	RGD
Celera	15	12,815,624 - 12,832,290 (-)	RGD

Sequence:

show sequence

GTAGGCCATGGCGCGTTCCCGGAAGAGCTCAAAGCAGAAAACGTAACAGCCCAGCTTTGATTAA
AGATGACTTCCTTGTTTACTCAAGAAGTTCACCTTTCTAAAAGACATGAAGAAATAGTGTCCCA
AAGATTAATGTTACTTCAGAAAATGAAAAATAAATTCGGAGATCAAAGCACAGAAAGGGCATCT
CTCCAAGCCACGGAGACTGCTTGTAGAAGGAACCTCCAGCTCTTGCAGGACATAGATGTTGCAG
AGAAGGCTTTTCAGACCAAGCTTACCCCACATCCACAGCCGGAGATGCTTTCTCTTGAGACTCG
TTACTGGGCATCAGTAGAAGAACATGTCCCCAAATGGGAACAGTTTCTTTTAGGAAAAGCACTG
TATCCGATTGGGGCTGAAAGTCAAAGTGAGGCACCATTTGTTCAAAGCGAAGCGAAGTCCTAAC
TTATTCATATGCTCTGGGGGTGTTGGGGCACCGAAAACCTATTTGATAAAACTATGTAAGTTGT
GGCAGAAACTTAGAGAAGTTTTATTTTGTTACTATTTTCTATTGTTTCACTGCTTCCTCGGCAG
CATTAGTATGAGAGTCTGCGGGAAAGTCTCAGGCTAGACCCTTGCACGAACATAGATTTGCCAA
GAAAAGAAAGAATGCTTGTTAAAGATGGTATTAAATCAACGTTGTGTGTGCTTTAAACCCGGGC
CATCATTCTCGACTAAAGCAGATTGGCCGTAGGTATCCTGGAGTCGTGGTTTAACGTCATTCAC
TATGGGAACAGGAGCAGGAAACTGGATTACTGGGGTTGTGTGCTCCAGACAGACTTCTCCAAGC
CCTTAACTATAAAGCATTCAGTATGTACCAGTTTCAGGAAGGCTCAGGATGGTTTTGAAAAATG
AGAGCTGGGAATGGCTACTGAATTCCGACAGGCTTATTTGAAGATTATCAACCTTGTGAAGACA
AATACCCCTCCCTCAGTGATATCTTCCAACTCCTCCTCCCCCTCCTTTCTACTACCATTATCTC
TAAAACTTGAGAAAAATAAAACACGTAAACTCGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006251730 ⟹ XP_006251792

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	15,247,627 - 15,265,516 (-)	NCBI
mRatBN7.2	15	12,815,159 - 12,835,115 (-)	NCBI
Rnor_6.0	15	12,869,217 - 12,889,144 (-)	NCBI
Rnor_5.0	15	16,899,627 - 16,916,353 (-)	NCBI

Sequence:

show sequence

CGCAAAGATGGCTGCCTGGCCACGCCCACGTCTTGCGCAGGCGTAGGCCCTGGCGCGTTCCCGG
AAGAGCTCAAAGCAGAAAACGTAACAGCCCAGCTTTGATTAAAGATGACTTCCTTGTTTACTCA
AGAAGTTCACCTTTCTAAAAGACATGAAGAAATAGTGTCCCAAAGATTAATGTTACTTCAGAAA
ATGAAAAATAAATTCGGAGATCAAAGCACAGAAAGGGCATCTCTCCAAGCCACGGAGACTGCTT
GTAGAAGGAACCTCCAGCTCTTGCAGGACATAGATGTTGCAGAGAAGGCTTTTCAGACCAAGCT
TACCCCACATCCACAGCCGGAGATGCTTTCTCTTGAGACTCGTTACTGGGCATCAGTAGAAGAA
CATGTCCCCAAATGGGAACAGTTTCTTTTAGGAAAAGCACTCATTCAGTATGTACCAGTTTCAG
GAAGGCTCAGGATGGTTTTGAAAAATGAGAGCTGGGAATGGCTACTGAATTCCGACAGGCTTAT
TTGAAGATTATCAACCTTGTGAAGACAAATACCCCTCCCTCAGTGATATCTTCCAACTCCTCCT
CCCCCTCCTTTCTACTACCATTATCTCTAAAACTTGAGAAAAATAAAACACGTAAACTCGGAAA
GCTGTGTGGGTCACAGCCCTCAGCAGAGCTTCGAGTCTCTGGTTCCTCACTGGCTGCCTGAGCA
CTGGGAAGAAAACAGCGTGGGTTCCTAGCTGTGGAGACAGCTTCTGGTGAGGAGTCTGCACTGC
TCCGCATTCTGAATCACAAATGTGGTTTTATTGTGGTAGGTGAAGGTTCTTCCTTTTGTTTTTT
TGTTTTGTTTTGTTTTGTTTTTGTTTCACCTTTAAGATAAAAATCTCACAGATCAAGCTGGCTT
TGAAGTCACAGCCATCCTCTTGCTTCAGCCTCTGAACACAGGGATCACAGATATGAGCCCTGAT
ATTTAGGTATCTAGATATTTGTATTTTTAAAAGAAGAAGGCAAGAGTAAGTTAAAACACACATA
AGCCCTCACTACAACAAAGAACTAGTAAAGCGTCCATTGTGCCACACGTTCCTGTTCACTGCCA
TCTTGGAAATGTCCTGTTGAGTGGGTGTTGGTGTGGGTAACAATAACATTGTTTTCATAATATG
TGCTGGCAGATTAGCACACTTCTCTGCAGTGTTAACAGTTGTAATTAAGGAATAAACAGCGCAG
GGTGTCAGTCCGATGACAATTTCATCTATAGTGTCACAATACAAAATGTCACAAAATATTAGAG
CTGTTATATAGCTACAAAAAGTATCTGCTTAAGAGCCGAAGGCATCTTTAAGAGAGGAGACAGA
GATAGGAAACGGAACACTGACTTAGCGGCCAGAACAATTTTATACATTCTCAAGACTGTCATGA
AAACAAATTGGTAATTTTTTCTGTTACATTATAGTTTGGGCTCTAGCCATCCAGTTGATTTAGC
AGGAAAATGCAGGTTTCTTAGCAGCTCCAAACCAGTAAACAGATTTAGATGTAGAAAGGAACAT
GAGGAAGGTTTCTTTTTTTTTTAAACATCCAGTCTCCCAGCATATGCACATAAGAAGGTGAATG
AGGCAATGCGAAACTTATTTTTCCTTAGTCAAGTGAAAAAAGGCTAACCATTTGTTAGCTGGTA
AAATATTGTGTCAAGTAAGCCGGAACATTCCAAAATTAAACAGTGGTTGATATGTTAACGTCCT
CAAATATTTGAGTGCACACTTCCTTTGAGATCTGTAAATTAAATCACCAGTAGGTTGAATTAAA
ATACAAAATGAATGGCAGTGTAACCTCTCAGGAAAGGCTTTGTGTTGTTTTTTTTTTCCTCCCC
GACATTGATTGACTTGCTAGCTTGGTTTGGGCATTTTATTAAGTATAATCTACAAAAGCTTGCA
CAATGTAGGGCAAAGAGAAGGTGTTTAAAGGCTGTAGCCAAGCCATTTCTTCGTTTTGGTTAAT
ACTTCACAAATTCCCACAGATGACTTTCTTCTTGGCCCCTGCAGAGACTACCCCACCCCATCCT
GCCTTGTAGACTGTAACAGATTGCACCACATGGTGTCTGTTAAAAAAAAAAAAATCCCATGGGC
TCTGGATATCCCATTAAAGGGTTTTATATTTCTGTGGGCAAATTAGCTTAACACAGAAATTTCC
AAACATTGTTCTATGGGACGAAGGAAGGTAAACTACATACAAAGTCTTTTTCTACGACTAGGGA
TTACTTACTACAAGGAAACAGGAAATACCTACTCATACCTCCTTACCCCAAATCAATATTTTTT
AATTTTTATTATTTTTAGTTAAATGTATGCTGTGGGGGTACACGAATGCAGGTGCCAAATAGGT
CAGAGGCATTGCCCCCCATCCCTTCATGCTAGAGTTACGAGTTGTGAGCTGCCCAATGTGGGTG
CTGGGAACAGAACTCGGGTCCTCTACAAAGCAGTAGACCTCTGAACTGCTGATCTGTGTCTCAA
ATCAACCAAATCAGTGTCTTAACCAAAATATACTTCTCCATGAACATGACATAATGGATTTGGG
TGTTTGTTTTTAAAGAACAATAGAGTTTGAAGGGAAACTGTTAGTGTTTGTTTTGGGGGGTTTA
TTTGTTTTTTTGTTTGTTTGTTTGTTTGATTGTTTTGTTTTTAAGAGCAAAGATTTTCCCCAAC
GCCTTTCTGGGCTTGCTTAAAGCATAAGTATTCCGAGCTTACTTTCTGCTGGAACATTTCTGGT
TATGAAGTTATTAAAGTATAAAATAGTAAAATCAGAAAGGAGCTTCCCTCACGCTTACGAAGAC
AAACTGGAGCTAGAGAGAGGGCTCAGCGGTTTCCGATTGCATCGACCTGGTTTGGACTCCCAGC
ATCCACTAAGCAGTTCACTACTATCCATGATTCCAGTTCCCAGGACTCCAGTGACCTCTTTCTG
ATCTCCATAGGCACCAGCCATGCATGTGGTGTACATATTTGTATGTAGGCAAAACACCCATACA
CAAAAAGTTACTAAATAAATCTAGAAGAAAACTCATGGATTATAAATACCAAGGAAGAGGCTTC
TACTCCAGAGTCCTCTGAAAAGAGAGCAGTGGATGGAGGCGGAGTCTCAGACACAGTACTGCCT
CTGCCTCAGACAGGAGTGCTTCAGTTTAGCAGCGTACAGAGCAGCAGCCTAACTTGACTTACAA
TGCTGGCATCTGTTCTTTCTGACCCGTTAGAATAAATAAAGTGAGGATGGCAACATATTTATGT
TTGGATAAAGTTTAAACTTCTCTCTTACCACTTCTTGCCTGACTGGAGCTGTGTGTACATAAAG
TTATCAACTTCAGAAGAAAGGACCAGACTTGAAAATCTGTGTGACACACATTCTGATACATAAA
ACTTAGCACAGAAGCTCATGAAGCTGGCTTTACCCAACAGATTCTTTCTTCCATTTCCTTCACT
GCTGTATTAATTTACTCCAAGCCAATTTTGTCTTTCAAAGAAGTCTTTTACTTAAAGCCATGTT
TGCAGCCTACCCTACTGATTTCCTCGACTTTTGAAGAATGGCCCCAATCAAGCAGTTTTTAAAC
CCTTTCTAGTAGTGTGTCTTTAATTGGAGCATGGAGATCGCTAAGAGTTGCAGGCCTCCAGAGT
GGGCAATAACCTGGCAGCGAGCGTCAACAAGAGTGGAAGAAATGGAGGAAGCCGAAGAGGGAAA
AGGCTTTTTGAGAAAGCTTTGGGCTTGCAATGAGTGGGCTCCACCCTACTCCTCTGTGCATTGT
CTGTTTTCCTTGTAGTTTAGAAGTTAACTTGTCTACCTAGGAAATTTAATTCCTCATTGCTAAT
AAAGAGTTTTTGAGACAAA

hide sequence

RefSeq Acc Id:

XM_006251731 ⟹ XP_006251793

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	15,247,627 - 15,265,517 (-)	NCBI
mRatBN7.2	15	12,815,159 - 12,835,090 (-)	NCBI
Rnor_6.0	15	12,869,217 - 12,889,144 (-)	NCBI
Rnor_5.0	15	16,899,627 - 16,916,353 (-)	NCBI

Sequence:

show sequence

CGCAAAGATGGCTGCCTGGCCACGCCCACGTCTTGCGCAGGCGTAGGCCCTGGCGCGTTCCCGG
AAGAGCTCAAAGAAAACGTAACAGCCCAGCTTTGATTAAAGATGACTTCCTTGTTTACTCAAGA
AGTTCACCTTTCTAAAAGACATGAAGAAATAGTGTCCCAAAGATTAATGTTACTTCAGAAAATG
AAAAATAAATTCGGAGATCAAAGCACAGAAAGGGCATCTCTCCAAGCCACGGAGACTGCTTGTA
GAAGGAACCTCCAGCTCTTGCAGGACATAGATGTTGCAGAGAAGGCTTTTCAGACCAAGCTTAC
CCCACATCCACAGCCGGAGATGCTTTCTCTTGAGACTCGTTACTGGGCATCAGTAGAAGAACAT
GTCCCCAAATGGGAACAGTTTCTTTTAGGAAAAGCACTCATTCAGTATGTACCAGTTTCAGGAA
GGCTCAGGATGGTTTTGAAAAATGAGAGCTGGGAATGGCTACTGAATTCCGACAGGCTTATTTG
AAGATTATCAACCTTGTGAAGACAAATACCCCTCCCTCAGTGATATCTTCCAACTCCTCCTCCC
CCTCCTTTCTACTACCATTATCTCTAAAACTTGAGAAAAATAAAACACGTAAACTCGGAAAGCT
GTGTGGGTCACAGCCCTCAGCAGAGCTTCGAGTCTCTGGTTCCTCACTGGCTGCCTGAGCACTG
GGAAGAAAACAGCGTGGGTTCCTAGCTGTGGAGACAGCTTCTGGTGAGGAGTCTGCACTGCTCC
GCATTCTGAATCACAAATGTGGTTTTATTGTGGTAGGTGAAGGTTCTTCCTTTTGTTTTTTTGT
TTTGTTTTGTTTTGTTTTTGTTTCACCTTTAAGATAAAAATCTCACAGATCAAGCTGGCTTTGA
AGTCACAGCCATCCTCTTGCTTCAGCCTCTGAACACAGGGATCACAGATATGAGCCCTGATATT
TAGGTATCTAGATATTTGTATTTTTAAAAGAAGAAGGCAAGAGTAAGTTAAAACACACATAAGC
CCTCACTACAACAAAGAACTAGTAAAGCGTCCATTGTGCCACACGTTCCTGTTCACTGCCATCT
TGGAAATGTCCTGTTGAGTGGGTGTTGGTGTGGGTAACAATAACATTGTTTTCATAATATGTGC
TGGCAGATTAGCACACTTCTCTGCAGTGTTAACAGTTGTAATTAAGGAATAAACAGCGCAGGGT
GTCAGTCCGATGACAATTTCATCTATAGTGTCACAATACAAAATGTCACAAAATATTAGAGCTG
TTATATAGCTACAAAAAGTATCTGCTTAAGAGCCGAAGGCATCTTTAAGAGAGGAGACAGAGAT
AGGAAACGGAACACTGACTTAGCGGCCAGAACAATTTTATACATTCTCAAGACTGTCATGAAAA
CAAATTGGTAATTTTTTCTGTTACATTATAGTTTGGGCTCTAGCCATCCAGTTGATTTAGCAGG
AAAATGCAGGTTTCTTAGCAGCTCCAAACCAGTAAACAGATTTAGATGTAGAAAGGAACATGAG
GAAGGTTTCTTTTTTTTTTAAACATCCAGTCTCCCAGCATATGCACATAAGAAGGTGAATGAGG
CAATGCGAAACTTATTTTTCCTTAGTCAAGTGAAAAAAGGCTAACCATTTGTTAGCTGGTAAAA
TATTGTGTCAAGTAAGCCGGAACATTCCAAAATTAAACAGTGGTTGATATGTTAACGTCCTCAA
ATATTTGAGTGCACACTTCCTTTGAGATCTGTAAATTAAATCACCAGTAGGTTGAATTAAAATA
CAAAATGAATGGCAGTGTAACCTCTCAGGAAAGGCTTTGTGTTGTTTTTTTTTTCCTCCCCGAC
ATTGATTGACTTGCTAGCTTGGTTTGGGCATTTTATTAAGTATAATCTACAAAAGCTTGCACAA
TGTAGGGCAAAGAGAAGGTGTTTAAAGGCTGTAGCCAAGCCATTTCTTCGTTTTGGTTAATACT
TCACAAATTCCCACAGATGACTTTCTTCTTGGCCCCTGCAGAGACTACCCCACCCCATCCTGCC
TTGTAGACTGTAACAGATTGCACCACATGGTGTCTGTTAAAAAAAAAAAAATCCCATGGGCTCT
GGATATCCCATTAAAGGGTTTTATATTTCTGTGGGCAAATTAGCTTAACACAGAAATTTCCAAA
CATTGTTCTATGGGACGAAGGAAGGTAAACTACATACAAAGTCTTTTTCTACGACTAGGGATTA
CTTACTACAAGGAAACAGGAAATACCTACTCATACCTCCTTACCCCAAATCAATATTTTTTAAT
TTTTATTATTTTTAGTTAAATGTATGCTGTGGGGGTACACGAATGCAGGTGCCAAATAGGTCAG
AGGCATTGCCCCCCATCCCTTCATGCTAGAGTTACGAGTTGTGAGCTGCCCAATGTGGGTGCTG
GGAACAGAACTCGGGTCCTCTACAAAGCAGTAGACCTCTGAACTGCTGATCTGTGTCTCAAATC
AACCAAATCAGTGTCTTAACCAAAATATACTTCTCCATGAACATGACATAATGGATTTGGGTGT
TTGTTTTTAAAGAACAATAGAGTTTGAAGGGAAACTGTTAGTGTTTGTTTTGGGGGGTTTATTT
GTTTTTTTGTTTGTTTGTTTGTTTGATTGTTTTGTTTTTAAGAGCAAAGATTTTCCCCAACGCC
TTTCTGGGCTTGCTTAAAGCATAAGTATTCCGAGCTTACTTTCTGCTGGAACATTTCTGGTTAT
GAAGTTATTAAAGTATAAAATAGTAAAATCAGAAAGGAGCTTCCCTCACGCTTACGAAGACAAA
CTGGAGCTAGAGAGAGGGCTCAGCGGTTTCCGATTGCATCGACCTGGTTTGGACTCCCAGCATC
CACTAAGCAGTTCACTACTATCCATGATTCCAGTTCCCAGGACTCCAGTGACCTCTTTCTGATC
TCCATAGGCACCAGCCATGCATGTGGTGTACATATTTGTATGTAGGCAAAACACCCATACACAA
AAAGTTACTAAATAAATCTAGAAGAAAACTCATGGATTATAAATACCAAGGAAGAGGCTTCTAC
TCCAGAGTCCTCTGAAAAGAGAGCAGTGGATGGAGGCGGAGTCTCAGACACAGTACTGCCTCTG
CCTCAGACAGGAGTGCTTCAGTTTAGCAGCGTACAGAGCAGCAGCCTAACTTGACTTACAATGC
TGGCATCTGTTCTTTCTGACCCGTTAGAATAAATAAAGTGAGGATGGCAACATATTTATGTTTG
GATAAAGTTTAAACTTCTCTCTTACCACTTCTTGCCTGACTGGAGCTGTGTGTACATAAAGTTA
TCAACTTCAGAAGAAAGGACCAGACTTGAAAATCTGTGTGACACACATTCTGATACATAAAACT
TAGCACAGAAGCTCATGAAGCTGGCTTTACCCAACAGATTCTTTCTTCCATTTCCTTCACTGCT
GTATTAATTTACTCCAAGCCAATTTTGTCTTTCAAAGAAGTCTTTTACTTAAAGCCATGTTTGC
AGCCTACCCTACTGATTTCCTCGACTTTTGAAGAATGGCCCCAATCAAGCAGTTTTTAAACCCT
TTCTAGTAGTGTGTCTTTAATTGGAGCATGGAGATCGCTAAGAGTTGCAGGCCTCCAGAGTGGG
CAATAACCTGGCAGCGAGCGTCAACAAGAGTGGAAGAAATGGAGGAAGCCGAAGAGGGAAAAGG
CTTTTTGAGAAAGCTTTGGGCTTGCAATGAGTGGGCTCCACCCTACTCCTCTGTGCATTGTCTG
TTTTCCTTGTAGTTTAGAAGTTAACTTGTCTACCTAGGAAATTTAATTCCTCATTGCTAATAAA
GAGTTTTTGAGACAAA

hide sequence

RefSeq Acc Id:

XM_006251732 ⟹ XP_006251794

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	15,247,627 - 15,265,461 (-)	NCBI
mRatBN7.2	15	12,815,159 - 12,835,013 (-)	NCBI
Rnor_6.0	15	12,869,217 - 12,889,075 (-)	NCBI
Rnor_5.0	15	16,899,627 - 16,916,353 (-)	NCBI

Sequence:

show sequence

CTCAAAGGTGGGCGCAGTGTGGTCCCAGCCTGTGGCCCCTGAGGCCAGCGGGCGGCTGAGGGGA
AAGCTAATGAGGGGGGAGCCAGCAGAAAACGTAACAGCCCAGCTTTGATTAAAGATGACTTCCT
TGTTTACTCAAGAAGTTCACCTTTCTAAAAGACATGAAGAAATAGTGTCCCAAAGATTAATGTT
ACTTCAGAAAATGAAAAATAAATTCGGAGATCAAAGCACAGAAAGGGCATCTCTCCAAGCCACG
GAGACTGCTTGTAGAAGGAACCTCCAGCTCTTGCAGGACATAGATGTTGCAGAGAAGGCTTTTC
AGACCAAGCTTACCCCACATCCACAGCCGGAGATGCTTTCTCTTGAGACTCGTTACTGGGCATC
AGTAGAAGAACATGTCCCCAAATGGGAACAGTTTCTTTTAGGAAAAGCACTCATTCAGTATGTA
CCAGTTTCAGGAAGGCTCAGGATGGTTTTGAAAAATGAGAGCTGGGAATGGCTACTGAATTCCG
ACAGGCTTATTTGAAGATTATCAACCTTGTGAAGACAAATACCCCTCCCTCAGTGATATCTTCC
AACTCCTCCTCCCCCTCCTTTCTACTACCATTATCTCTAAAACTTGAGAAAAATAAAACACGTA
AACTCGGAAAGCTGTGTGGGTCACAGCCCTCAGCAGAGCTTCGAGTCTCTGGTTCCTCACTGGC
TGCCTGAGCACTGGGAAGAAAACAGCGTGGGTTCCTAGCTGTGGAGACAGCTTCTGGTGAGGAG
TCTGCACTGCTCCGCATTCTGAATCACAAATGTGGTTTTATTGTGGTAGGTGAAGGTTCTTCCT
TTTGTTTTTTTGTTTTGTTTTGTTTTGTTTTTGTTTCACCTTTAAGATAAAAATCTCACAGATC
AAGCTGGCTTTGAAGTCACAGCCATCCTCTTGCTTCAGCCTCTGAACACAGGGATCACAGATAT
GAGCCCTGATATTTAGGTATCTAGATATTTGTATTTTTAAAAGAAGAAGGCAAGAGTAAGTTAA
AACACACATAAGCCCTCACTACAACAAAGAACTAGTAAAGCGTCCATTGTGCCACACGTTCCTG
TTCACTGCCATCTTGGAAATGTCCTGTTGAGTGGGTGTTGGTGTGGGTAACAATAACATTGTTT
TCATAATATGTGCTGGCAGATTAGCACACTTCTCTGCAGTGTTAACAGTTGTAATTAAGGAATA
AACAGCGCAGGGTGTCAGTCCGATGACAATTTCATCTATAGTGTCACAATACAAAATGTCACAA
AATATTAGAGCTGTTATATAGCTACAAAAAGTATCTGCTTAAGAGCCGAAGGCATCTTTAAGAG
AGGAGACAGAGATAGGAAACGGAACACTGACTTAGCGGCCAGAACAATTTTATACATTCTCAAG
ACTGTCATGAAAACAAATTGGTAATTTTTTCTGTTACATTATAGTTTGGGCTCTAGCCATCCAG
TTGATTTAGCAGGAAAATGCAGGTTTCTTAGCAGCTCCAAACCAGTAAACAGATTTAGATGTAG
AAAGGAACATGAGGAAGGTTTCTTTTTTTTTTAAACATCCAGTCTCCCAGCATATGCACATAAG
AAGGTGAATGAGGCAATGCGAAACTTATTTTTCCTTAGTCAAGTGAAAAAAGGCTAACCATTTG
TTAGCTGGTAAAATATTGTGTCAAGTAAGCCGGAACATTCCAAAATTAAACAGTGGTTGATATG
TTAACGTCCTCAAATATTTGAGTGCACACTTCCTTTGAGATCTGTAAATTAAATCACCAGTAGG
TTGAATTAAAATACAAAATGAATGGCAGTGTAACCTCTCAGGAAAGGCTTTGTGTTGTTTTTTT
TTTCCTCCCCGACATTGATTGACTTGCTAGCTTGGTTTGGGCATTTTATTAAGTATAATCTACA
AAAGCTTGCACAATGTAGGGCAAAGAGAAGGTGTTTAAAGGCTGTAGCCAAGCCATTTCTTCGT
TTTGGTTAATACTTCACAAATTCCCACAGATGACTTTCTTCTTGGCCCCTGCAGAGACTACCCC
ACCCCATCCTGCCTTGTAGACTGTAACAGATTGCACCACATGGTGTCTGTTAAAAAAAAAAAAA
TCCCATGGGCTCTGGATATCCCATTAAAGGGTTTTATATTTCTGTGGGCAAATTAGCTTAACAC
AGAAATTTCCAAACATTGTTCTATGGGACGAAGGAAGGTAAACTACATACAAAGTCTTTTTCTA
CGACTAGGGATTACTTACTACAAGGAAACAGGAAATACCTACTCATACCTCCTTACCCCAAATC
AATATTTTTTAATTTTTATTATTTTTAGTTAAATGTATGCTGTGGGGGTACACGAATGCAGGTG
CCAAATAGGTCAGAGGCATTGCCCCCCATCCCTTCATGCTAGAGTTACGAGTTGTGAGCTGCCC
AATGTGGGTGCTGGGAACAGAACTCGGGTCCTCTACAAAGCAGTAGACCTCTGAACTGCTGATC
TGTGTCTCAAATCAACCAAATCAGTGTCTTAACCAAAATATACTTCTCCATGAACATGACATAA
TGGATTTGGGTGTTTGTTTTTAAAGAACAATAGAGTTTGAAGGGAAACTGTTAGTGTTTGTTTT
GGGGGGTTTATTTGTTTTTTTGTTTGTTTGTTTGTTTGATTGTTTTGTTTTTAAGAGCAAAGAT
TTTCCCCAACGCCTTTCTGGGCTTGCTTAAAGCATAAGTATTCCGAGCTTACTTTCTGCTGGAA
CATTTCTGGTTATGAAGTTATTAAAGTATAAAATAGTAAAATCAGAAAGGAGCTTCCCTCACGC
TTACGAAGACAAACTGGAGCTAGAGAGAGGGCTCAGCGGTTTCCGATTGCATCGACCTGGTTTG
GACTCCCAGCATCCACTAAGCAGTTCACTACTATCCATGATTCCAGTTCCCAGGACTCCAGTGA
CCTCTTTCTGATCTCCATAGGCACCAGCCATGCATGTGGTGTACATATTTGTATGTAGGCAAAA
CACCCATACACAAAAAGTTACTAAATAAATCTAGAAGAAAACTCATGGATTATAAATACCAAGG
AAGAGGCTTCTACTCCAGAGTCCTCTGAAAAGAGAGCAGTGGATGGAGGCGGAGTCTCAGACAC
AGTACTGCCTCTGCCTCAGACAGGAGTGCTTCAGTTTAGCAGCGTACAGAGCAGCAGCCTAACT
TGACTTACAATGCTGGCATCTGTTCTTTCTGACCCGTTAGAATAAATAAAGTGAGGATGGCAAC
ATATTTATGTTTGGATAAAGTTTAAACTTCTCTCTTACCACTTCTTGCCTGACTGGAGCTGTGT
GTACATAAAGTTATCAACTTCAGAAGAAAGGACCAGACTTGAAAATCTGTGTGACACACATTCT
GATACATAAAACTTAGCACAGAAGCTCATGAAGCTGGCTTTACCCAACAGATTCTTTCTTCCAT
TTCCTTCACTGCTGTATTAATTTACTCCAAGCCAATTTTGTCTTTCAAAGAAGTCTTTTACTTA
AAGCCATGTTTGCAGCCTACCCTACTGATTTCCTCGACTTTTGAAGAATGGCCCCAATCAAGCA
GTTTTTAAACCCTTTCTAGTAGTGTGTCTTTAATTGGAGCATGGAGATCGCTAAGAGTTGCAGG
CCTCCAGAGTGGGCAATAACCTGGCAGCGAGCGTCAACAAGAGTGGAAGAAATGGAGGAAGCCG
AAGAGGGAAAAGGCTTTTTGAGAAAGCTTTGGGCTTGCAATGAGTGGGCTCCACCCTACTCCTC
TGTGCATTGTCTGTTTTCCTTGTAGTTTAGAAGTTAACTTGTCTACCTAGGAAATTTAATTCCT
CATTGCTAATAAAGAGTTTTTGAGACAAA

hide sequence

RefSeq Acc Id:

XM_006251733 ⟹ XP_006251795

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	15,247,627 - 15,265,483 (-)	NCBI
mRatBN7.2	15	12,815,159 - 12,835,060 (-)	NCBI
Rnor_6.0	15	12,869,217 - 12,889,062 (-)	NCBI
Rnor_5.0	15	16,899,627 - 16,916,353 (-)	NCBI

Sequence:

show sequence

GCAGTGTGGTCCCAGCCTGTGGCCCCTGAGGCCAGCGGGCGGCTGAGGGGAAAGCTAATGAGGG
GGGAGCCAGAAAACGTAACAGCCCAGCTTTGATTAAAGATGACTTCCTTGTTTACTCAAGAAGT
TCACCTTTCTAAAAGACATGAAGAAATAGTGTCCCAAAGATTAATGTTACTTCAGAAAATGAAA
AATAAATTCGGAGATCAAAGCACAGAAAGGGCATCTCTCCAAGCCACGGAGACTGCTTGTAGAA
GGAACCTCCAGCTCTTGCAGGACATAGATGTTGCAGAGAAGGCTTTTCAGACCAAGCTTACCCC
ACATCCACAGCCGGAGATGCTTTCTCTTGAGACTCGTTACTGGGCATCAGTAGAAGAACATGTC
CCCAAATGGGAACAGTTTCTTTTAGGAAAAGCACTCATTCAGTATGTACCAGTTTCAGGAAGGC
TCAGGATGGTTTTGAAAAATGAGAGCTGGGAATGGCTACTGAATTCCGACAGGCTTATTTGAAG
ATTATCAACCTTGTGAAGACAAATACCCCTCCCTCAGTGATATCTTCCAACTCCTCCTCCCCCT
CCTTTCTACTACCATTATCTCTAAAACTTGAGAAAAATAAAACACGTAAACTCGGAAAGCTGTG
TGGGTCACAGCCCTCAGCAGAGCTTCGAGTCTCTGGTTCCTCACTGGCTGCCTGAGCACTGGGA
AGAAAACAGCGTGGGTTCCTAGCTGTGGAGACAGCTTCTGGTGAGGAGTCTGCACTGCTCCGCA
TTCTGAATCACAAATGTGGTTTTATTGTGGTAGGTGAAGGTTCTTCCTTTTGTTTTTTTGTTTT
GTTTTGTTTTGTTTTTGTTTCACCTTTAAGATAAAAATCTCACAGATCAAGCTGGCTTTGAAGT
CACAGCCATCCTCTTGCTTCAGCCTCTGAACACAGGGATCACAGATATGAGCCCTGATATTTAG
GTATCTAGATATTTGTATTTTTAAAAGAAGAAGGCAAGAGTAAGTTAAAACACACATAAGCCCT
CACTACAACAAAGAACTAGTAAAGCGTCCATTGTGCCACACGTTCCTGTTCACTGCCATCTTGG
AAATGTCCTGTTGAGTGGGTGTTGGTGTGGGTAACAATAACATTGTTTTCATAATATGTGCTGG
CAGATTAGCACACTTCTCTGCAGTGTTAACAGTTGTAATTAAGGAATAAACAGCGCAGGGTGTC
AGTCCGATGACAATTTCATCTATAGTGTCACAATACAAAATGTCACAAAATATTAGAGCTGTTA
TATAGCTACAAAAAGTATCTGCTTAAGAGCCGAAGGCATCTTTAAGAGAGGAGACAGAGATAGG
AAACGGAACACTGACTTAGCGGCCAGAACAATTTTATACATTCTCAAGACTGTCATGAAAACAA
ATTGGTAATTTTTTCTGTTACATTATAGTTTGGGCTCTAGCCATCCAGTTGATTTAGCAGGAAA
ATGCAGGTTTCTTAGCAGCTCCAAACCAGTAAACAGATTTAGATGTAGAAAGGAACATGAGGAA
GGTTTCTTTTTTTTTTAAACATCCAGTCTCCCAGCATATGCACATAAGAAGGTGAATGAGGCAA
TGCGAAACTTATTTTTCCTTAGTCAAGTGAAAAAAGGCTAACCATTTGTTAGCTGGTAAAATAT
TGTGTCAAGTAAGCCGGAACATTCCAAAATTAAACAGTGGTTGATATGTTAACGTCCTCAAATA
TTTGAGTGCACACTTCCTTTGAGATCTGTAAATTAAATCACCAGTAGGTTGAATTAAAATACAA
AATGAATGGCAGTGTAACCTCTCAGGAAAGGCTTTGTGTTGTTTTTTTTTTCCTCCCCGACATT
GATTGACTTGCTAGCTTGGTTTGGGCATTTTATTAAGTATAATCTACAAAAGCTTGCACAATGT
AGGGCAAAGAGAAGGTGTTTAAAGGCTGTAGCCAAGCCATTTCTTCGTTTTGGTTAATACTTCA
CAAATTCCCACAGATGACTTTCTTCTTGGCCCCTGCAGAGACTACCCCACCCCATCCTGCCTTG
TAGACTGTAACAGATTGCACCACATGGTGTCTGTTAAAAAAAAAAAAATCCCATGGGCTCTGGA
TATCCCATTAAAGGGTTTTATATTTCTGTGGGCAAATTAGCTTAACACAGAAATTTCCAAACAT
TGTTCTATGGGACGAAGGAAGGTAAACTACATACAAAGTCTTTTTCTACGACTAGGGATTACTT
ACTACAAGGAAACAGGAAATACCTACTCATACCTCCTTACCCCAAATCAATATTTTTTAATTTT
TATTATTTTTAGTTAAATGTATGCTGTGGGGGTACACGAATGCAGGTGCCAAATAGGTCAGAGG
CATTGCCCCCCATCCCTTCATGCTAGAGTTACGAGTTGTGAGCTGCCCAATGTGGGTGCTGGGA
ACAGAACTCGGGTCCTCTACAAAGCAGTAGACCTCTGAACTGCTGATCTGTGTCTCAAATCAAC
CAAATCAGTGTCTTAACCAAAATATACTTCTCCATGAACATGACATAATGGATTTGGGTGTTTG
TTTTTAAAGAACAATAGAGTTTGAAGGGAAACTGTTAGTGTTTGTTTTGGGGGGTTTATTTGTT
TTTTTGTTTGTTTGTTTGTTTGATTGTTTTGTTTTTAAGAGCAAAGATTTTCCCCAACGCCTTT
CTGGGCTTGCTTAAAGCATAAGTATTCCGAGCTTACTTTCTGCTGGAACATTTCTGGTTATGAA
GTTATTAAAGTATAAAATAGTAAAATCAGAAAGGAGCTTCCCTCACGCTTACGAAGACAAACTG
GAGCTAGAGAGAGGGCTCAGCGGTTTCCGATTGCATCGACCTGGTTTGGACTCCCAGCATCCAC
TAAGCAGTTCACTACTATCCATGATTCCAGTTCCCAGGACTCCAGTGACCTCTTTCTGATCTCC
ATAGGCACCAGCCATGCATGTGGTGTACATATTTGTATGTAGGCAAAACACCCATACACAAAAA
GTTACTAAATAAATCTAGAAGAAAACTCATGGATTATAAATACCAAGGAAGAGGCTTCTACTCC
AGAGTCCTCTGAAAAGAGAGCAGTGGATGGAGGCGGAGTCTCAGACACAGTACTGCCTCTGCCT
CAGACAGGAGTGCTTCAGTTTAGCAGCGTACAGAGCAGCAGCCTAACTTGACTTACAATGCTGG
CATCTGTTCTTTCTGACCCGTTAGAATAAATAAAGTGAGGATGGCAACATATTTATGTTTGGAT
AAAGTTTAAACTTCTCTCTTACCACTTCTTGCCTGACTGGAGCTGTGTGTACATAAAGTTATCA
ACTTCAGAAGAAAGGACCAGACTTGAAAATCTGTGTGACACACATTCTGATACATAAAACTTAG
CACAGAAGCTCATGAAGCTGGCTTTACCCAACAGATTCTTTCTTCCATTTCCTTCACTGCTGTA
TTAATTTACTCCAAGCCAATTTTGTCTTTCAAAGAAGTCTTTTACTTAAAGCCATGTTTGCAGC
CTACCCTACTGATTTCCTCGACTTTTGAAGAATGGCCCCAATCAAGCAGTTTTTAAACCCTTTC
TAGTAGTGTGTCTTTAATTGGAGCATGGAGATCGCTAAGAGTTGCAGGCCTCCAGAGTGGGCAA
TAACCTGGCAGCGAGCGTCAACAAGAGTGGAAGAAATGGAGGAAGCCGAAGAGGGAAAAGGCTT
TTTGAGAAAGCTTTGGGCTTGCAATGAGTGGGCTCCACCCTACTCCTCTGTGCATTGTCTGTTT
TCCTTGTAGTTTAGAAGTTAACTTGTCTACCTAGGAAATTTAATTCCTCATTGCTAATAAAGAG
TTTTTGAGACAAA

hide sequence

RefSeq Acc Id:

XM_006251736 ⟹ XP_006251798

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	15,247,627 - 15,265,536 (-)	NCBI
mRatBN7.2	15	12,815,159 - 12,835,114 (-)	NCBI
Rnor_6.0	15	12,869,217 - 12,889,144 (-)	NCBI
Rnor_5.0	15	16,899,627 - 16,916,353 (-)	NCBI

Sequence:

show sequence

CGCAAAGATGGCTGCCTGGCCACGCCCACGTCTTGCGCAGGCGTAGGCCCTGGCGCGTTCCCGG
AAGAGCTCAAAGCAGAAAACGTAACAGCCCAGCTTTGATTAAAGATGACTTCCTTGTTTACTCA
AGAAGTTCACCTTTCTAAAAGACATGAAGAAATAGTGTCCCAAAGATTAATGTTACTTCAGAAA
ATGAAAAATAAATTCGGAGATCAAAGCACAGAAAGGGCATCTCTCCAAGCCACGGAGACTGCTT
GTAGAAGGAACCTCCAGCTCTTGCAGGACATAGATGTTGCAGAGAAGGCTTTTCAGACCAAGCT
TACCCCACATCCACAGCCGGAGATGCTTTCTCTTGAGACTCGTTACTGGGCATCAGTAGAAGAA
CATGTCCCCAAATGGGAACAGTTTCTTTTAGGAAAAGCACTTATGTACCAGTTTCAGGAAGGCT
CAGGATGGTTTTGAAAAATGAGAGCTGGGAATGGCTACTGAATTCCGACAGGCTTATTTGAAGA
TTATCAACCTTGTGAAGACAAATACCCCTCCCTCAGTGATATCTTCCAACTCCTCCTCCCCCTC
CTTTCTACTACCATTATCTCTAAAACTTGAGAAAAATAAAACACGTAAACTCGGAAAGCTGTGT
GGGTCACAGCCCTCAGCAGAGCTTCGAGTCTCTGGTTCCTCACTGGCTGCCTGAGCACTGGGAA
GAAAACAGCGTGGGTTCCTAGCTGTGGAGACAGCTTCTGGTGAGGAGTCTGCACTGCTCCGCAT
TCTGAATCACAAATGTGGTTTTATTGTGGTAGGTGAAGGTTCTTCCTTTTGTTTTTTTGTTTTG
TTTTGTTTTGTTTTTGTTTCACCTTTAAGATAAAAATCTCACAGATCAAGCTGGCTTTGAAGTC
ACAGCCATCCTCTTGCTTCAGCCTCTGAACACAGGGATCACAGATATGAGCCCTGATATTTAGG
TATCTAGATATTTGTATTTTTAAAAGAAGAAGGCAAGAGTAAGTTAAAACACACATAAGCCCTC
ACTACAACAAAGAACTAGTAAAGCGTCCATTGTGCCACACGTTCCTGTTCACTGCCATCTTGGA
AATGTCCTGTTGAGTGGGTGTTGGTGTGGGTAACAATAACATTGTTTTCATAATATGTGCTGGC
AGATTAGCACACTTCTCTGCAGTGTTAACAGTTGTAATTAAGGAATAAACAGCGCAGGGTGTCA
GTCCGATGACAATTTCATCTATAGTGTCACAATACAAAATGTCACAAAATATTAGAGCTGTTAT
ATAGCTACAAAAAGTATCTGCTTAAGAGCCGAAGGCATCTTTAAGAGAGGAGACAGAGATAGGA
AACGGAACACTGACTTAGCGGCCAGAACAATTTTATACATTCTCAAGACTGTCATGAAAACAAA
TTGGTAATTTTTTCTGTTACATTATAGTTTGGGCTCTAGCCATCCAGTTGATTTAGCAGGAAAA
TGCAGGTTTCTTAGCAGCTCCAAACCAGTAAACAGATTTAGATGTAGAAAGGAACATGAGGAAG
GTTTCTTTTTTTTTTAAACATCCAGTCTCCCAGCATATGCACATAAGAAGGTGAATGAGGCAAT
GCGAAACTTATTTTTCCTTAGTCAAGTGAAAAAAGGCTAACCATTTGTTAGCTGGTAAAATATT
GTGTCAAGTAAGCCGGAACATTCCAAAATTAAACAGTGGTTGATATGTTAACGTCCTCAAATAT
TTGAGTGCACACTTCCTTTGAGATCTGTAAATTAAATCACCAGTAGGTTGAATTAAAATACAAA
ATGAATGGCAGTGTAACCTCTCAGGAAAGGCTTTGTGTTGTTTTTTTTTTCCTCCCCGACATTG
ATTGACTTGCTAGCTTGGTTTGGGCATTTTATTAAGTATAATCTACAAAAGCTTGCACAATGTA
GGGCAAAGAGAAGGTGTTTAAAGGCTGTAGCCAAGCCATTTCTTCGTTTTGGTTAATACTTCAC
AAATTCCCACAGATGACTTTCTTCTTGGCCCCTGCAGAGACTACCCCACCCCATCCTGCCTTGT
AGACTGTAACAGATTGCACCACATGGTGTCTGTTAAAAAAAAAAAAATCCCATGGGCTCTGGAT
ATCCCATTAAAGGGTTTTATATTTCTGTGGGCAAATTAGCTTAACACAGAAATTTCCAAACATT
GTTCTATGGGACGAAGGAAGGTAAACTACATACAAAGTCTTTTTCTACGACTAGGGATTACTTA
CTACAAGGAAACAGGAAATACCTACTCATACCTCCTTACCCCAAATCAATATTTTTTAATTTTT
ATTATTTTTAGTTAAATGTATGCTGTGGGGGTACACGAATGCAGGTGCCAAATAGGTCAGAGGC
ATTGCCCCCCATCCCTTCATGCTAGAGTTACGAGTTGTGAGCTGCCCAATGTGGGTGCTGGGAA
CAGAACTCGGGTCCTCTACAAAGCAGTAGACCTCTGAACTGCTGATCTGTGTCTCAAATCAACC
AAATCAGTGTCTTAACCAAAATATACTTCTCCATGAACATGACATAATGGATTTGGGTGTTTGT
TTTTAAAGAACAATAGAGTTTGAAGGGAAACTGTTAGTGTTTGTTTTGGGGGGTTTATTTGTTT
TTTTGTTTGTTTGTTTGTTTGATTGTTTTGTTTTTAAGAGCAAAGATTTTCCCCAACGCCTTTC
TGGGCTTGCTTAAAGCATAAGTATTCCGAGCTTACTTTCTGCTGGAACATTTCTGGTTATGAAG
TTATTAAAGTATAAAATAGTAAAATCAGAAAGGAGCTTCCCTCACGCTTACGAAGACAAACTGG
AGCTAGAGAGAGGGCTCAGCGGTTTCCGATTGCATCGACCTGGTTTGGACTCCCAGCATCCACT
AAGCAGTTCACTACTATCCATGATTCCAGTTCCCAGGACTCCAGTGACCTCTTTCTGATCTCCA
TAGGCACCAGCCATGCATGTGGTGTACATATTTGTATGTAGGCAAAACACCCATACACAAAAAG
TTACTAAATAAATCTAGAAGAAAACTCATGGATTATAAATACCAAGGAAGAGGCTTCTACTCCA
GAGTCCTCTGAAAAGAGAGCAGTGGATGGAGGCGGAGTCTCAGACACAGTACTGCCTCTGCCTC
AGACAGGAGTGCTTCAGTTTAGCAGCGTACAGAGCAGCAGCCTAACTTGACTTACAATGCTGGC
ATCTGTTCTTTCTGACCCGTTAGAATAAATAAAGTGAGGATGGCAACATATTTATGTTTGGATA
AAGTTTAAACTTCTCTCTTACCACTTCTTGCCTGACTGGAGCTGTGTGTACATAAAGTTATCAA
CTTCAGAAGAAAGGACCAGACTTGAAAATCTGTGTGACACACATTCTGATACATAAAACTTAGC
ACAGAAGCTCATGAAGCTGGCTTTACCCAACAGATTCTTTCTTCCATTTCCTTCACTGCTGTAT
TAATTTACTCCAAGCCAATTTTGTCTTTCAAAGAAGTCTTTTACTTAAAGCCATGTTTGCAGCC
TACCCTACTGATTTCCTCGACTTTTGAAGAATGGCCCCAATCAAGCAGTTTTTAAACCCTTTCT
AGTAGTGTGTCTTTAATTGGAGCATGGAGATCGCTAAGAGTTGCAGGCCTCCAGAGTGGGCAAT
AACCTGGCAGCGAGCGTCAACAAGAGTGGAAGAAATGGAGGAAGCCGAAGAGGGAAAAGGCTTT
TTGAGAAAGCTTTGGGCTTGCAATGAGTGGGCTCCACCCTACTCCTCTGTGCATTGTCTGTTTT
CCTTGTAGTTTAGAAGTTAACTTGTCTACCTAGGAAATTTAATTCCTCATTGCTAATAAAGAGT
TTTTGAGACAAA

hide sequence

RefSeq Acc Id:

XM_017599609 ⟹ XP_017455098

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	15,247,627 - 15,264,937 (-)	NCBI
mRatBN7.2	15	12,815,159 - 12,834,910 (-)	NCBI
Rnor_6.0	15	12,869,217 - 12,888,983 (-)	NCBI

Sequence:

show sequence

AGGAGGGTTTTTAAGAGTTTTCCGAGGACGAAAGGCGGGAATTGGGGTAGCCGTTGGGCACTTG
CTCGCTTCAAAAGGCGGAGTTTTTCTTGAAGTGCTCCCAAGGAGAGGAAGAGTCAGCAGGAGTG
ACTTTCCAGGGGAGCGTGGACGCTGCTCTAGTCGGCTGCAGAACTCGCTGGGAGGAAGGCGAGG
AAGCTGGGCGGGAGACGGGCGGCTGTCCTCTGGGCCCTGGAGGCCGCCCTGGCGGGAGAAGGAG
CCTGCGGAAGGGCCAGACAGGCTCCTGTGCAGTGCGCTGACCCAGAGCTCAGGCTTCCTGTCTG
CATCCGACCCTGAGCGATTCAGGGACGAACGTTTAATTTCAGAAAGTTTAGGAAAGCCTCCTTC
GTGGACCGTCTTCGTTGTATTTGTGTCCCTTTTGTGCTTTTTCAGCCCAGCGCTTTCAGAGCAC
GTCCTTAGACCACCATCTATACTGGTGCAAGTTCTTAAGCCAAGGGGAGCCTGCGCCTGGTGTA
GTGAGTCATAGAAACTCTCCAAACGAGAGTGCTGACCTGCTAGGATGTGCAGAAAACGTAACAG
CCCAGCTTTGATTAAAGATGACTTCCTTGTTTACTCAAGAAGTTCACCTTTCTAAAAGACATGA
AGAAATAGTGTCCCAAAGATTAATGTTACTTCAGAAAATGAAAAATAAATTCGGAGATCAAAGC
ACAGAAAGGGCATCTCTCCAAGCCACGGAGACTGCTTGTAGAAGGAACCTCCAGCTCTTGCAGG
ACATAGATGTTGCAGAGAAGGCTTTTCAGACCAAGCTTACCCCACATCCACAGCCGGAGATGCT
TTCTCTTGAGACTCGTTACTGGGCATCAGTAGAAGAACATGTCCCCAAATGGGAACAGTTTCTT
TTAGGAAAAGCACTCATTCAGTATGTACCAGTTTCAGGAAGGCTCAGGATGGTTTTGAAAAATG
AGAGCTGGGAATGGCTACTGAATTCCGACAGGCTTATTTGAAGATTATCAACCTTGTGAAGACA
AATACCCCTCCCTCAGTGATATCTTCCAACTCCTCCTCCCCCTCCTTTCTACTACCATTATCTC
TAAAACTTGAGAAAAATAAAACACGTAAACTCGGAAAGCTGTGTGGGTCACAGCCCTCAGCAGA
GCTTCGAGTCTCTGGTTCCTCACTGGCTGCCTGAGCACTGGGAAGAAAACAGCGTGGGTTCCTA
GCTGTGGAGACAGCTTCTGGTGAGGAGTCTGCACTGCTCCGCATTCTGAATCACAAATGTGGTT
TTATTGTGGTAGGTGAAGGTTCTTCCTTTTGTTTTTTTGTTTTGTTTTGTTTTGTTTTTGTTTC
ACCTTTAAGATAAAAATCTCACAGATCAAGCTGGCTTTGAAGTCACAGCCATCCTCTTGCTTCA
GCCTCTGAACACAGGGATCACAGATATGAGCCCTGATATTTAGGTATCTAGATATTTGTATTTT
TAAAAGAAGAAGGCAAGAGTAAGTTAAAACACACATAAGCCCTCACTACAACAAAGAACTAGTA
AAGCGTCCATTGTGCCACACGTTCCTGTTCACTGCCATCTTGGAAATGTCCTGTTGAGTGGGTG
TTGGTGTGGGTAACAATAACATTGTTTTCATAATATGTGCTGGCAGATTAGCACACTTCTCTGC
AGTGTTAACAGTTGTAATTAAGGAATAAACAGCGCAGGGTGTCAGTCCGATGACAATTTCATCT
ATAGTGTCACAATACAAAATGTCACAAAATATTAGAGCTGTTATATAGCTACAAAAAGTATCTG
CTTAAGAGCCGAAGGCATCTTTAAGAGAGGAGACAGAGATAGGAAACGGAACACTGACTTAGCG
GCCAGAACAATTTTATACATTCTCAAGACTGTCATGAAAACAAATTGGTAATTTTTTCTGTTAC
ATTATAGTTTGGGCTCTAGCCATCCAGTTGATTTAGCAGGAAAATGCAGGTTTCTTAGCAGCTC
CAAACCAGTAAACAGATTTAGATGTAGAAAGGAACATGAGGAAGGTTTCTTTTTTTTTTAAACA
TCCAGTCTCCCAGCATATGCACATAAGAAGGTGAATGAGGCAATGCGAAACTTATTTTTCCTTA
GTCAAGTGAAAAAAGGCTAACCATTTGTTAGCTGGTAAAATATTGTGTCAAGTAAGCCGGAACA
TTCCAAAATTAAACAGTGGTTGATATGTTAACGTCCTCAAATATTTGAGTGCACACTTCCTTTG
AGATCTGTAAATTAAATCACCAGTAGGTTGAATTAAAATACAAAATGAATGGCAGTGTAACCTC
TCAGGAAAGGCTTTGTGTTGTTTTTTTTTTCCTCCCCGACATTGATTGACTTGCTAGCTTGGTT
TGGGCATTTTATTAAGTATAATCTACAAAAGCTTGCACAATGTAGGGCAAAGAGAAGGTGTTTA
AAGGCTGTAGCCAAGCCATTTCTTCGTTTTGGTTAATACTTCACAAATTCCCACAGATGACTTT
CTTCTTGGCCCCTGCAGAGACTACCCCACCCCATCCTGCCTTGTAGACTGTAACAGATTGCACC
ACATGGTGTCTGTTAAAAAAAAAAAAATCCCATGGGCTCTGGATATCCCATTAAAGGGTTTTAT
ATTTCTGTGGGCAAATTAGCTTAACACAGAAATTTCCAAACATTGTTCTATGGGACGAAGGAAG
GTAAACTACATACAAAGTCTTTTTCTACGACTAGGGATTACTTACTACAAGGAAACAGGAAATA
CCTACTCATACCTCCTTACCCCAAATCAATATTTTTTAATTTTTATTATTTTTAGTTAAATGTA
TGCTGTGGGGGTACACGAATGCAGGTGCCAAATAGGTCAGAGGCATTGCCCCCCATCCCTTCAT
GCTAGAGTTACGAGTTGTGAGCTGCCCAATGTGGGTGCTGGGAACAGAACTCGGGTCCTCTACA
AAGCAGTAGACCTCTGAACTGCTGATCTGTGTCTCAAATCAACCAAATCAGTGTCTTAACCAAA
ATATACTTCTCCATGAACATGACATAATGGATTTGGGTGTTTGTTTTTAAAGAACAATAGAGTT
TGAAGGGAAACTGTTAGTGTTTGTTTTGGGGGGTTTATTTGTTTTTTTGTTTGTTTGTTTGTTT
GATTGTTTTGTTTTTAAGAGCAAAGATTTTCCCCAACGCCTTTCTGGGCTTGCTTAAAGCATAA
GTATTCCGAGCTTACTTTCTGCTGGAACATTTCTGGTTATGAAGTTATTAAAGTATAAAATAGT
AAAATCAGAAAGGAGCTTCCCTCACGCTTACGAAGACAAACTGGAGCTAGAGAGAGGGCTCAGC
GGTTTCCGATTGCATCGACCTGGTTTGGACTCCCAGCATCCACTAAGCAGTTCACTACTATCCA
TGATTCCAGTTCCCAGGACTCCAGTGACCTCTTTCTGATCTCCATAGGCACCAGCCATGCATGT
GGTGTACATATTTGTATGTAGGCAAAACACCCATACACAAAAAGTTACTAAATAAATCTAGAAG
AAAACTCATGGATTATAAATACCAAGGAAGAGGCTTCTACTCCAGAGTCCTCTGAAAAGAGAGC
AGTGGATGGAGGCGGAGTCTCAGACACAGTACTGCCTCTGCCTCAGACAGGAGTGCTTCAGTTT
AGCAGCGTACAGAGCAGCAGCCTAACTTGACTTACAATGCTGGCATCTGTTCTTTCTGACCCGT
TAGAATAAATAAAGTGAGGATGGCAACATATTTATGTTTGGATAAAGTTTAAACTTCTCTCTTA
CCACTTCTTGCCTGACTGGAGCTGTGTGTACATAAAGTTATCAACTTCAGAAGAAAGGACCAGA
CTTGAAAATCTGTGTGACACACATTCTGATACATAAAACTTAGCACAGAAGCTCATGAAGCTGG
CTTTACCCAACAGATTCTTTCTTCCATTTCCTTCACTGCTGTATTAATTTACTCCAAGCCAATT
TTGTCTTTCAAAGAAGTCTTTTACTTAAAGCCATGTTTGCAGCCTACCCTACTGATTTCCTCGA
CTTTTGAAGAATGGCCCCAATCAAGCAGTTTTTAAACCCTTTCTAGTAGTGTGTCTTTAATTGG
AGCATGGAGATCGCTAAGAGTTGCAGGCCTCCAGAGTGGGCAATAACCTGGCAGCGAGCGTCAA
CAAGAGTGGAAGAAATGGAGGAAGCCGAAGAGGGAAAAGGCTTTTTGAGAAAGCTTTGGGCTTG
CAATGAGTGGGCTCCACCCTACTCCTCTGTGCATTGTCTGTTTTCCTTGTAGTTTAGAAGTTAA
CTTGTCTACCTAGGAAATTTAATTCCTCATTGCTAATAAAGAGTTTTTGAGACAAA

hide sequence

RefSeq Acc Id:

XM_039093086 ⟹ XP_038949014

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	15,247,627 - 15,265,529 (-)	NCBI
mRatBN7.2	15	12,818,382 - 12,835,090 (-)	NCBI

RefSeq Acc Id:

XM_039093088 ⟹ XP_038949016

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	15,247,627 - 15,265,560 (-)	NCBI
mRatBN7.2	15	12,815,159 - 12,835,090 (-)	NCBI

RefSeq Acc Id:

XM_063274071 ⟹ XP_063130141

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	15,247,627 - 15,264,937 (-)	NCBI

RefSeq Acc Id:

XM_063274073 ⟹ XP_063130143

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	15,247,627 - 15,265,494 (-)	NCBI

RefSeq Acc Id:

XM_063274074 ⟹ XP_063130144

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	15,247,627 - 15,264,937 (-)	NCBI

RefSeq Acc Id:

XM_063274075 ⟹ XP_063130145

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	15,247,627 - 15,265,478 (-)	NCBI

RefSeq Acc Id:

XM_063274076 ⟹ XP_063130146

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	15,247,627 - 15,265,461 (-)	NCBI

RefSeq Acc Id:

XM_063274077 ⟹ XP_063130147

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	15,247,627 - 15,264,937 (-)	NCBI

RefSeq Acc Id:

XM_063274078 ⟹ XP_063130148

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	15,247,627 - 15,264,937 (-)	NCBI

RefSeq Acc Id:

XM_063274079 ⟹ XP_063130149

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	15,256,755 - 15,265,516 (-)	NCBI

RefSeq Acc Id:

XM_063274080 ⟹ XP_063130150

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	15,253,191 - 15,265,516 (-)	NCBI

RefSeq Acc Id:

XM_063274081 ⟹ XP_063130151

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	15	15,256,951 - 15,265,516 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001099496	(Get FASTA)	NCBI Sequence Viewer
	NP_001427013	(Get FASTA)	NCBI Sequence Viewer
	NP_001427014	(Get FASTA)	NCBI Sequence Viewer
	XP_006251792	(Get FASTA)	NCBI Sequence Viewer
	XP_006251793	(Get FASTA)	NCBI Sequence Viewer
	XP_006251794	(Get FASTA)	NCBI Sequence Viewer
	XP_006251795	(Get FASTA)	NCBI Sequence Viewer
	XP_006251798	(Get FASTA)	NCBI Sequence Viewer
	XP_017455098	(Get FASTA)	NCBI Sequence Viewer
	XP_038949014	(Get FASTA)	NCBI Sequence Viewer
	XP_038949016	(Get FASTA)	NCBI Sequence Viewer
	XP_063130141	(Get FASTA)	NCBI Sequence Viewer
	XP_063130143	(Get FASTA)	NCBI Sequence Viewer
	XP_063130144	(Get FASTA)	NCBI Sequence Viewer
	XP_063130145	(Get FASTA)	NCBI Sequence Viewer
	XP_063130146	(Get FASTA)	NCBI Sequence Viewer
	XP_063130147	(Get FASTA)	NCBI Sequence Viewer
	XP_063130148	(Get FASTA)	NCBI Sequence Viewer
	XP_063130149	(Get FASTA)	NCBI Sequence Viewer
	XP_063130150	(Get FASTA)	NCBI Sequence Viewer
	XP_063130151	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI68755	(Get FASTA)	NCBI Sequence Viewer
	EDL94137	(Get FASTA)	NCBI Sequence Viewer
	EDL94138	(Get FASTA)	NCBI Sequence Viewer
	EDL94139	(Get FASTA)	NCBI Sequence Viewer
	EDL94140	(Get FASTA)	NCBI Sequence Viewer
	EDL94141	(Get FASTA)	NCBI Sequence Viewer
	EDL94142	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000069161
	ENSRNOP00000069161.2

RefSeq Acc Id:	NP_001099496 ⟸ NM_001106026
- UniProtKB:	B5DEQ1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTSLFTQEVHLSKRHEEIVSQRLMLLQKMKNKFGDQSTERASLQATETACRRNLQLLQDIDVAE KAFQTKLTPHPQPEMLSLETRYWASVEEHVPKWEQFLLGKALYPIGAESQSEAPFVQSEAKS hide sequence

RefSeq Acc Id:	XP_006251793 ⟸ XM_006251731
- Peptide Label:	isoform X1
- Sequence:	show sequence MTSLFTQEVHLSKRHEEIVSQRLMLLQKMKNKFGDQSTERASLQATETACRRNLQLLQDIDVAE KAFQTKLTPHPQPEMLSLETRYWASVEEHVPKWEQFLLGKALIQYVPVSGRLRMVLKNESWEWL LNSDRLI hide sequence

RefSeq Acc Id:	XP_006251798 ⟸ XM_006251736
- Peptide Label:	isoform X3
- Sequence:	show sequence MTSLFTQEVHLSKRHEEIVSQRLMLLQKMKNKFGDQSTERASLQATETACRRNLQLLQDIDVAE KAFQTKLTPHPQPEMLSLETRYWASVEEHVPKWEQFLLGKALMYQFQEGSGWF hide sequence

RefSeq Acc Id:	XP_006251792 ⟸ XM_006251730
- Peptide Label:	isoform X1
- Sequence:	show sequence MTSLFTQEVHLSKRHEEIVSQRLMLLQKMKNKFGDQSTERASLQATETACRRNLQLLQDIDVAE KAFQTKLTPHPQPEMLSLETRYWASVEEHVPKWEQFLLGKALIQYVPVSGRLRMVLKNESWEWL LNSDRLI hide sequence

RefSeq Acc Id:	XP_006251795 ⟸ XM_006251733
- Peptide Label:	isoform X1
- Sequence:	show sequence MTSLFTQEVHLSKRHEEIVSQRLMLLQKMKNKFGDQSTERASLQATETACRRNLQLLQDIDVAE KAFQTKLTPHPQPEMLSLETRYWASVEEHVPKWEQFLLGKALIQYVPVSGRLRMVLKNESWEWL LNSDRLI hide sequence

RefSeq Acc Id:	XP_006251794 ⟸ XM_006251732
- Peptide Label:	isoform X1
- Sequence:	show sequence MTSLFTQEVHLSKRHEEIVSQRLMLLQKMKNKFGDQSTERASLQATETACRRNLQLLQDIDVAE KAFQTKLTPHPQPEMLSLETRYWASVEEHVPKWEQFLLGKALIQYVPVSGRLRMVLKNESWEWL LNSDRLI hide sequence

RefSeq Acc Id:	XP_017455098 ⟸ XM_017599609
- Peptide Label:	isoform X1
- Sequence:	show sequence MTSLFTQEVHLSKRHEEIVSQRLMLLQKMKNKFGDQSTERASLQATETACRRNLQLLQDIDVAE KAFQTKLTPHPQPEMLSLETRYWASVEEHVPKWEQFLLGKALIQYVPVSGRLRMVLKNESWEWL LNSDRLI hide sequence

Ensembl Acc Id:

ENSRNOP00000069161 ⟸ ENSRNOT00000084687

Ensembl Acc Id:

ENSRNOP00000057927 ⟸ ENSRNOT00000061214

RefSeq Acc Id:	XP_038949016 ⟸ XM_039093088
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2JUN2 (UniProtKB/TrEMBL), A6K091 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038949014 ⟸ XM_039093086
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063130143 ⟸ XM_063274073
- Peptide Label:	isoform X2
- UniProtKB:	B5DEQ1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063130145 ⟸ XM_063274075
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2JUN2 (UniProtKB/TrEMBL), A6K091 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063130146 ⟸ XM_063274076
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2JUN2 (UniProtKB/TrEMBL), A6K091 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063130148 ⟸ XM_063274078
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2JUN2 (UniProtKB/TrEMBL), A6K091 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063130141 ⟸ XM_063274071
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063130144 ⟸ XM_063274074
- Peptide Label:	isoform X2
- UniProtKB:	B5DEQ1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063130147 ⟸ XM_063274077
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2JUN2 (UniProtKB/TrEMBL), A6K091 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063130150 ⟸ XM_063274080
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063130149 ⟸ XM_063274079
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063130151 ⟸ XM_063274081
- Peptide Label:	isoform X5

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B5DEQ1-F1-model_v2	AlphaFold	B5DEQ1	1-126	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13699585

Promoter ID:

EPDNEW_R10108

Type:

multiple initiation site

Name:

RGD1306063_1

Description:

similar to HT021

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	15	12,889,123 - 12,889,183	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306063	AgrOrtholog
BioCyc Gene	G2FUF-14351	BioCyc
Ensembl Genes	ENSRNOG00000039871	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000084687	ENTREZGENE
	ENSRNOT00000084687.3	UniProtKB/TrEMBL
InterPro	DUF4570	UniProtKB/TrEMBL
KEGG Report	rno:289928	UniProtKB/TrEMBL
NCBI Gene	289928	ENTREZGENE
PANTHER	PTHR14286	UniProtKB/TrEMBL
	RGD1306063 PROTEIN	UniProtKB/TrEMBL
Pfam	DUF4570	UniProtKB/TrEMBL
PhenoGen	Cep15	PhenoGen
RatGTEx	ENSRNOG00000039871	RatGTEx
UniProt	A0A0G2JUN2	ENTREZGENE, UniProtKB/TrEMBL
	A6K091	ENTREZGENE, UniProtKB/TrEMBL
	B5DEQ1	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-04-18	Cep15	centrosomal protein 15	RGD1306063	similar to HT021	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1306063	similar to HT021	RGD1306063_predicted	similar to HT021 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-20	RGD1306063_predicted	similar to HT021 (predicted)	LOC289928_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC289928_predicted	similar to HT021 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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