Asphd2 (aspartate beta-hydroxylase domain containing 2)

Gene: Asphd2 (aspartate beta-hydroxylase domain containing 2) Rattus norvegicus

Analyze

Symbol:

Asphd2

Name:

aspartate beta-hydroxylase domain containing 2

RGD ID:

1306020

Description:

Predicted to enable dioxygenase activity and metal ion binding activity. Predicted to be located in membrane. Orthologous to human ASPHD2 (aspartate beta-hydroxylase domain containing 2); INTERACTS WITH 4,4'-sulfonyldiphenol; 6-propyl-2-thiouracil; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

3110001L23Rik; aspartate beta-hydroxylase domain-containing protein 2; calsequestrin-binding protein; LOC364948; MGC105590; RGD1306020; similar to aspartyl beta-hydroxylase

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	49,908,539 - 49,919,060 (+)	NCBI		GRCr8
mRatBN7.2	12	44,248,132 - 44,258,653 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	44,248,145 - 44,257,772 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	45,417,138 - 45,427,657 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	46,027,387 - 46,037,908 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	45,087,924 - 45,098,446 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	50,269,347 - 50,279,855 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	50,269,347 - 50,279,745 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	52,030,658 - 52,037,039 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	14,362,089 - 14,373,336 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	19	14,366,913 - 14,378,162 (-)	NCBI
Celera	12	45,831,032 - 45,841,361 (+)	NCBI		Celera
Cytogenetic Map	12	q16	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

cataract 23 (ISO)

genetic disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2-hydroxypropanoic acid (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

aflatoxin M1 (ISO)

all-trans-retinoic acid (ISO)

antirheumatic drug (ISO)

avobenzone (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP)

butanal (ISO)

cadmium atom (ISO)

cadmium dichloride (EXP)

chlorpyrifos (ISO)

clobetasol (ISO)

Cuprizon (EXP)

cyclosporin A (ISO)

dorsomorphin (ISO)

ethyl methanesulfonate (ISO)

folic acid (ISO)

lead(0) (ISO)

methyl methanesulfonate (ISO)

nickel atom (ISO)

paracetamol (ISO)

pentanal (ISO)

perfluorooctanoic acid (ISO)

phenylmercury acetate (ISO)

progesterone (ISO)

propanal (ISO)

rac-lactic acid (ISO)

SB 431542 (ISO)

Soman (EXP)

temozolomide (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

triptonide (ISO)

valproic acid (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

membrane (IEA)

Molecular Function

dioxygenase activity (IEA)

metal ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	GOA pipeline	RGD automated data pipeline
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:15489334	PMID:19946888

Genomics

Comparative Map Data

Asphd2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	49,908,539 - 49,919,060 (+)	NCBI		GRCr8
mRatBN7.2	12	44,248,132 - 44,258,653 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	44,248,145 - 44,257,772 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	45,417,138 - 45,427,657 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	46,027,387 - 46,037,908 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	45,087,924 - 45,098,446 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	50,269,347 - 50,279,855 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	50,269,347 - 50,279,745 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	52,030,658 - 52,037,039 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	14,362,089 - 14,373,336 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	19	14,366,913 - 14,378,162 (-)	NCBI
Celera	12	45,831,032 - 45,841,361 (+)	NCBI		Celera
Cytogenetic Map	12	q16	NCBI

ASPHD2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	26,429,260 - 26,445,015 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	26,429,260 - 26,445,015 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	22	26,825,226 - 26,840,981 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	25,155,302 - 25,169,571 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	22	10,629,181 - 10,644,874 (+)	NCBI		Celera
Cytogenetic Map	22	q12.1	NCBI
HuRef	22	9,776,906 - 9,788,553 (+)	NCBI		HuRef
CHM1_1	22	26,784,764 - 26,800,434 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	22	26,891,706 - 26,907,453 (+)	NCBI		T2T-CHM13v2.0

Asphd2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	112,532,220 - 112,543,236 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	112,532,220 - 112,542,732 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	112,384,354 - 112,395,370 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	112,384,354 - 112,394,866 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	112,814,465 - 112,821,233 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	112,625,748 - 112,632,516 (-)	NCBI		MGSCv36	mm8
Celera	5	109,505,438 - 109,512,206 (-)	NCBI		Celera
Cytogenetic Map	5	F	NCBI
cM Map	5	54.7	NCBI

Asphd2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955455	1,030,899 - 1,043,240 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955455	1,030,962 - 1,039,129 (+)	NCBI	ChiLan1.0	ChiLan1.0

ASPHD2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	36,435,101 - 36,450,614 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	39,134,303 - 39,149,795 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	7,491,361 - 7,505,547 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	25,218,636 - 25,229,901 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	25,218,636 - 25,229,901 (+)	Ensembl	panpan1.1		panPan2

ASPHD2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	26	20,110,361 - 20,123,906 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	26	20,101,737 - 20,122,482 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	26	19,974,660 - 19,988,174 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	26	20,474,201 - 20,487,786 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	26	20,476,634 - 20,487,783 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	26	20,190,874 - 20,204,388 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	26	20,446,662 - 20,460,251 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	26	20,516,133 - 20,529,698 (+)	NCBI		UU_Cfam_GSD_1.0

Asphd2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	114,801,304 - 114,812,978 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936657	1,058,826 - 1,069,430 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936657	1,060,782 - 1,069,401 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ASPHD2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	44,034,247 - 44,043,224 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	44,030,582 - 44,045,093 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	46,910,268 - 46,924,906 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ASPHD2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	9,333,853 - 9,348,047 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	19	9,338,159 - 9,352,093 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	116,755,725 - 116,771,391 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Asphd2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624747	2,983,232 - 2,997,945 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624747	2,983,177 - 2,995,251 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Asphd2
29 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	266
Count of miRNA genes:	169
Interacting mature miRNAs:	191
Transcripts:	ENSRNOT00000000823
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
737979	Pia22	Pristane induced arthritis QTL 22	53.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	12	1	44465750	Rat
634351	Apr5	Acute phase response QTL 5	6.7		blood interleukin-6 amount (VT:0008595)	plasma interleukin-6 level (CMO:0001927)	12	1	44503507	Rat
2302042	Pia38	Pristane induced arthritis QTL 38	3.5	0.001	blood immunoglobulin amount (VT:0002460)	serum immunoglobulin G1 level (CMO:0002115)	12	1	44503507	Rat
634350	Apr4	Acute phase response QTL 4	6		orosomucoid 1 amount (VT:0010541)	plasma orosomucoid 1 level (CMO:0001467)	12	1172005	46172005	Rat
8552918	Pigfal7	Plasma insulin-like growth factor 1 level QTL 7			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	5564495	46669029	Rat
7411547	Bw129	Body weight QTL 129		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	6	5564495	46669029	Rat
7411597	Foco10	Food consumption QTL 10		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	5564495	46669029	Rat
7411641	Foco19	Food consumption QTL 19	27.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	5564495	46669029	Rat
8552964	Pigfal17	Plasma insulin-like growth factor 1 level QTL 17	3.5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	5564495	46669029	Rat
7411588	Foco6	Food consumption QTL 6		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	5564495	46669029	Rat
8552912	Pigfal6	Plasma insulin-like growth factor 1 level QTL 6	5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	5564498	46669029	Rat
10059594	Kidm46	Kidney mass QTL 46	3.79	0.025	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	12	6107579	46669029	Rat
1302792	Scl21	Serum cholesterol level QTL 21	3.8	0.0011	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	12	7196730	46669029	Rat
1549829	Scl48	Serum cholesterol level QTL 48	5		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	12	9603277	46669029	Rat
2293699	Bss49	Bone structure and strength QTL 49	5.61	0.0001	lumbar vertebra size trait (VT:0010518)	lumbar vertebra trabecular cross-sectional area (CMO:0001692)	12	10474137	46669029	Rat
2300186	Bmd59	Bone mineral density QTL 59	7.1	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	12	10474137	46669029	Rat
1331761	Bp218	Blood pressure QTL 218	2.973		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	12	11073825	45055165	Rat
61404	Bw120	Body weight QTL 120	5.1		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	12	12351619	46669029	Rat
1641928	Alcrsp5	Alcohol response QTL 5			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	12	12812385	46669029	Rat
2303569	Gluco44	Glucose level QTL 44	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	12	12812385	46669029	Rat
1549902	Bp269	Blood pressure QTL 269			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	12	13182736	46669029	Rat
1549912	Bp268	Blood pressure QTL 268			arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	10	13182736	46669029	Rat
2302060	Pia37	Pristane induced arthritis QTL 37	6.1	0.001	blood immunoglobulin amount (VT:0002460)	serum immunoglobulin G1 level (CMO:0002115)	12	13198157	46669029	Rat
631560	Apr1	Acute phase response QTL 1	6.1		orosomucoid 1 amount (VT:0010541)	plasma orosomucoid 1 level (CMO:0001467)	12	19144362	46669029	Rat
61324	Eae5	Experimental allergic encephalomyelitis QTL 5	14		nervous system integrity trait (VT:0010566)	percentage of study population developing relapsing-remitting experimental autoimmune encephalomyelitis during a period of time (CMO:0001402)	12	19610870	46669029	Rat
7411643	Foco20	Food consumption QTL 20		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	20328819	46669029	Rat
1300175	Cm5	Cardiac mass QTL 5	3.78		heart mass (VT:0007028)	heart left ventricle weight to body weight ratio (CMO:0000530)	12	28064433	45899022	Rat
1600386	Calcic2	Intracellular calcium level QTL 2		0.001	platelet physiology trait (VT:0005464)	platelet intracellular calcium level (CMO:0000922)	12	28064433	46669029	Rat
1300162	Bp188	Blood pressure QTL 188	3.19		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	12	32103174	45899022	Rat

Markers in Region

BE108001

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	44,257,535 - 44,257,730 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	50,278,738 - 50,278,932	NCBI	Rnor6.0
Rnor_5.0	12	52,036,803 - 52,036,997	UniSTS	Rnor5.0
RGSC_v3.4	19	14,362,131 - 14,362,325	UniSTS	RGSC3.4
Celera	12	45,841,125 - 45,841,319	UniSTS
RH 3.4 Map	19	161.21	UniSTS
Cytogenetic Map	19	p11	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium									56
Low			2	2		2			18	2	35
Below cutoff	1	18	13	10	2	10	2	2		14	5	1	2

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001009716	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769351	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598414	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598415	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598416	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598417	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089649	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089651	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039089652	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC123358	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC088863	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000079190 ⟹ ENSRNOP00000068694

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	12	44,248,145 - 44,257,772 (+)	Ensembl
Rnor_6.0 Ensembl	12	50,269,347 - 50,278,974 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000086782 ⟹ ENSRNOP00000073904

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	12	50,270,189 - 50,279,745 (+)	Ensembl

RefSeq Acc Id:

NM_001009716 ⟹ NP_001009716

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	49,908,539 - 49,919,060 (+)	NCBI
mRatBN7.2	12	44,248,132 - 44,258,653 (+)	NCBI
Rnor_6.0	12	50,269,347 - 50,278,974 (+)	NCBI
Rnor_5.0	12	52,030,658 - 52,037,039 (+)	NCBI
RGSC_v3.4	19	14,362,089 - 14,373,336 (-)	RGD
Celera	12	45,831,032 - 45,841,361 (+)	NCBI

Sequence:

show sequence

CACGCTTCCTTGGGAACTCGCAGCGCGATGTCCCCAGGCCAAGCTGAGCAGCCCCTTCTCCCTC
CAGTGAGCTGGGCATAACTGGCCGTGGCTAGCTAGACTGGGCCTCCCTGTGGGCAGGCGCCAGG
TCTGCAACAGCTCCAGTCGGCAGCGCCCAGGCGGGGCCGGGAGCCGCCGATCTTCCAGGCTGTT
CTATTTGCAATTTCATCCCACGTGTCCGCGGGGCCTCAGAAGTGTGTGTGGGATCCATCACAGG
TTTGGACATCATGAAAGCCCTTTCATGGTGGCTGACTGCATTTGCAAATGGGACCTAAGGCAGA
GCCACCCTCCGCCCCACTGCAGTGACTTTTCCTAGTGGGCCCAGCTGGCAGGCCTCACTGTTGA
TCAATGGAGCCCTTGGCAGGGACCGAGGGACAGTGGCAGCCATGCCTCCCCCTGCCACCACCAC
TCCTTCTGCCGCCTGCTAACCTGCACGCTGTGGGTGCCCTAGAGACCCCCAGAGGACTGACCAT
CTGAGCCAGCTTCCTTCGAGCGCCGAGTCCCCCAAGATGTGGCTGGAGTGGCTGGTAGCCTGGA
GCTGGTCTCTGGACGGCCTGAGGGACTGCATCGCCACTGGTATCCAGTCCGTGCGGGACTGTGA
CGGCACAGCTGTCATCACTGTGGCCTGCCTGCTCGTCTTGTTTGTGTGGTACTGTTACCATGTG
GGCCGAGAACAGCCCCGACCCCACGTATCCGTCAACTCCCTCCTGCAGGGTGTGGATGCCAACG
GGTTACAGAACGGATCCATGTACTGCCAGTCCCCTGAGTGTGTGCGCTGCACGCACCACGACGG
CCTCAACCAGAAGCTCTACCACAACCTGCAGGAGTACGCCAAGCGCTACTCATGGTCTGGCATG
GGCCGTATCCACAAGGGCATACGGGAGCAGGGCCGCTACCTCAGCAGCCAGCCCTCTATCCAGA
AGCCGGAGGTCTTCTTCCTGCCTGACCTCCCCACTACGCCCTACTTCCCCAGGGACGCCCAGAA
GCACGATGTGGAGCTGCTGGAGCGGAACTTCCAGGCCATCCTCTGCGAGTTCGAGGCACTCTAC
AAAGCCTTCTCTAACTGCAGCCTCCCTCAGGGGTGGAAAGTGAACAGCACCCCCAGCGGGGAGT
GGTTCACCTTTGACTTTGTCAGCCAGGGCGTTTGTGTCCCCAGGAACTGCAGGAAGTGCCCTCG
GACTTACCGCTTACTCGGCAGCCTCCGGACCTGTATTGGGAACAATGTTTTCGGGAACGCCTGC
ATCTCAGTGCTGAGTCCTGGGACCGTGATCACGGAGCACTATGGGCCCACAAACATCCGAATCC
GGTGCCACCTAGGTCTGAAGACTCCCAATGGCTGCGAGCTGGTGGTGGGGGGTGAGCCCCAGTG
CTGGGCAGAAGGCCGATGCCTACTCTTCGACGACTCCTTCCTGCACACCTCGTTCCATGAAGGT
TCTGCTGAGGATGGCCCACGGGTGGTCTTCATGGTGGACCTCTGGCACCCCAACGTGGCAGCTG
CTGAACGTCAGGCCCTGGATTTCATCTTTGCTCCAGGACGATGAGAACATTGCCTGGGCCGGAG
CCAGGCTGAGTGGATGGGTAGACTGTGTTATTGCCTACCCTGACTGTGCTCTGATCTGTGCTGG
GAGCATGAATGGCTTCCTGTCACTGCGGGGCATCTTTCCTTTGGTTACTGGGAACTTCCTAGGT
TTCTTTCCCTTTCTGGCTATTTGCTGGGACTTCTGACCTACTAGTGTGTCCCTTTGGCTGTGAC
CAGAGGCTCTGTGCCTCTCCCGTCTGTGTCACTTTGCTACCTGGTGTCCTCTCCGTGTTCTGGA
ATAGAGTAACCAAATGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG

hide sequence

RefSeq Acc Id:

XM_008769351 ⟹ XP_008767573

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	49,908,960 - 49,918,179 (+)	NCBI
mRatBN7.2	12	44,248,577 - 44,258,653 (+)	NCBI
Rnor_6.0	12	50,269,885 - 50,279,855 (+)	NCBI

Sequence:

show sequence

GCCGCCGAGCGCAGCGCGGGCGGCACCGGCTCCGCGGGGCTCCGGGCTCGGGTCGGGCAGCGGC
TGCGGGCGCGGCAGGGGGTGGCCGTGTCCCTGGGGCAGTGGCGTCGCCCTGGTCCCCGCAGCCG
CCCGCGCAGGTTTGGACATCATGAAAGCCCTTTCATGGTGGCTGACTGCATTTGCAAATGGGAC
CTAAGGCAGAGCCACCCTCCGCCCCACTGCAGTGACTTTTCCTAGTGGGCCCAGCTGGCAGGCC
TCACTGTTGATCAATGGAGCCCTTGGCAGGGACCGAGGGACAGTGGCAGCCATGCCTCCCCCTG
CCACCACCACTCCTTCTGCCGCCTGCTAACCTGCACGCTGTGGGTGCCCTAGAGACCCCCAGAG
GACTGACCATCTGAGCCAGCTTCCTTCGAGCGCCGAGTCCCCCAAGATGTGGCTGGAGTGGCTG
GTAGCCTGGAGCTGGTCTCTGGACGGCCTGAGGGACTGCATCGCCACTGGTATCCAGTCCGTGC
GGGACTGTGACGGCACAGCTGTCATCACTGTGGCCTGCCTGCTCGTCTTGTTTGTGTGGTACTG
TTACCATGTGGGCCGAGAACAGCCCCGACCCCACGTATCCGTCAACTCCCTCCTGCAGGGTGTG
GATGCCAACGGGTTACAGAACGGATCCATGTACTGCCAGTCCCCTGAGTGTGTGCGCTGCACGC
ACCACGACGGCCTCAACCAGAAGCTCTACCACAACCTGCAGGAGTACGCCAAGCGCTACTCATG
GTCTGGCATGGGCCGTATCCACAAGGGCATACGGGAGCAGGGCCGCTACCTCAGCAGCCAGCCC
TCTATCCAGAAGCCGGAGGTCTTCTTCCTGCCTGACCTCCCCACTACGCCCTACTTCCCCAGGG
ACGCCCAGAAGCACGATGTGGAGCTGCTGGAGCGGAACTTCCAGGCCATCCTCTGCGAGTTCGA
GGCACTCTACAAAGCCTTCTCTAACTGCAGCCTCCCTCAGGGGTGGAAAGTGAACAGCACCCCC
AGCGGGGAGTGGTTCACCTTTGACTTTGTCAGCCAGGGCGTTTGTGTCCCCAGGAACTGCAGGA
AGTGCCCTCGGACTTACCGCTTACTCGGCAGCCTCCGGACCTGTATTGGGAACAATGTTTTCGG
GAACGCCTGCATCTCAGTGCTGAGTCCTGGGACCGTGATCACGGAGCACTATGGGCCCACAAAC
ATCCGAATCCGGTGCCACCTAGGTCTGAAGACTCCCAATGGCTGCGAGCTGGTGGTGGGGGGTG
AGCCCCAGTGCTGGGCAGAAGGCCGATGCCTACTCTTCGACGACTCCTTCCTGCACACCTCGTT
CCATGAAGGTTCTGCTGAGGATGGCCCACGGGTGGTCTTCATGGTGGACCTCTGGCACCCCAAC
GTGGCAGCTGCTGAACGTCAGGCCCTGGATTTCATCTTTGCTCCAGGACGATGAGAACATTGCC
TGGGCCGGAGCCAGGCTGAGTGGATGGGTAGACTGTGTTATTGCCTACCCTGACTGTGCTCTGA
TCTGTGCTGGGAGCATGAATGGCTTCCTGTCACTGCGGGGCATCTTTCCTTTGGTTACTGGGAA
CTTCCTAGGTTTCTTTCCCTTTCTGGCTATTTGCTGGGACTTCTGACCTACTAGTGTGTCCCTT
TGGCTGTGACCAGAGGCTCTGTGCCTCTCCCGTCTGTGTCACTTTGCTACCTGGTGTCCTCTCC
GTGTTCTGGAATAGAGTAACCAAATGGCTGTTTTGTCTAAATGTCATCATCTTAAACTTGTGTA
GCTGTCTCAAGAGAGACCAAAAACAAAACAGAACAGAATGCCACAGACCAGAAGCCATTGAACC
AGACGGCTTGGCCTCCGAGGTTGGGGTTTCAAGGACCCTTCACTGTCCCAGAGCAAGAGACAGC
CTGCTGCCTACACATCTGGTTGGCCTCATTATGGGCTTGCCAGATACCATCAGGGTGGCGCGAA
AGTCAGAGCCTGGGGAATCCGTCATTATTGCTGATAGACCCCGAATCTATATAGGCCCTTGTGG
TGGTGACCAACCTGGGCCTTTTCTTTAGCCACAGCTTCCTACAGAGCGGGAGACCAAGTGAGGG
TTCTCAGGTCAGCCATAGAGCAAGGATCCACTTAGCTCACTGCCTACAGAAGCCTACTGGTGAG
CCCGGCCTGACACATGCTGCTGCTGTGGTTTCGAGTCCACAAGATTGTCAGGAGGCATGCTGGG
TCGAACCTTTGCCACCCACCATGTGATCAGAGTATCCATCATGCTCAGCAGTCTATTGCCTAAG
CGTTGACATTCATGATGCCTGTGTGTCCAACTTTCACACGCTAGACTCAGAGACGGCAGAGTTG
TCGCCAGGTCTGTCAGCACTGTCACAGGAGCCCATGGGTGTGATGACACCAGAAACAGCTTCAG
ACCCCCGGATCCACAGAGGTGGTGCTGAGTCTTCTGTCTCCTGAGAAGACGCAGTTCTGTTTCC
AAAGGGAAGGCCGGCTGGCGTTTCTGAGTCCAGCTGATGGGAGAATTCGGTCAGCCAGACACTC
TCAGTACACACTCCGGAGCGGTGGCCCCGGAGGGGTGGTCTGGAGCGGGACAGAATAAACAGGT
TGCCTTACAGGTC

hide sequence

RefSeq Acc Id:

XM_017598414 ⟹ XP_017453903

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	49,908,960 - 49,918,179 (+)	NCBI
mRatBN7.2	12	44,248,577 - 44,258,653 (+)	NCBI
Rnor_6.0	12	50,269,885 - 50,279,855 (+)	NCBI

Sequence:

show sequence

GCCGCCGAGCGCAGCGCGGGCGGCACCGGCTCCGCGGGGCTCCGGGCTCGGGTCGGGCAGCGGC
TGCGGGCGCGGCAGGGGGTGGCCGTGTCCCTGGGGCAGTGGCGTCGCCCTGGTCCCCGCAGCCG
CCCGCGCAGCTTCCTCCTTCTTCGCCTGTTTTCCTGGTCCCCCATCCTCCTCAGCATCACCCAC
TTTGACCCACCTCCCTGTCCCGTGAATTGTCACGCGCCCTAAACCTCCTTCTCACTTTTCCAGG
TTGGCGGTAACTCAGTTTCAAGAGTCAGGTATTACCTGTCACCAACCCAGTCTCCGGGCATCCG
AGGAAACCTCGGCAGTTTTAAGAGTTTCCTCAGAGTCTATGAACACCAGAGGAAGCAGCTGGGA
CCGATGGCATCACCCATGGAGGATGGGTGTCAAGCCTAACTCGGGCTCTGCATCTTGAGAAGAA
GCTGACTTCTCCTCTCTCTGCTCCTGTACTTTTCCTAGAAGCATGAGTCCCCATGAATATTCAG
CGTGTGTGTTTTTGTCTTCCTGAACATTATAGTCAAGTGATTCTTTATTCAGCCAACACCGGGA
CGGTGCCGGTTTGGACATCATGAAAGCCCTTTCATGGTGGCTGACTGCATTTGCAAATGGGACC
TAAGGCAGAGCCACCCTCCGCCCCACTGCAGTGACTTTTCCTAGTGGGCCCAGCTGGCAGGCCT
CACTGTTGATCAATGGAGCCCTTGGCAGGGACCGAGGGACAGTGGCAGCCATGCCTCCCCCTGC
CACCACCACTCCTTCTGCCGCCTGCTAACCTGCACGCTGTGGGTGCCCTAGAGACCCCCAGAGG
ACTGACCATCTGAGCCAGCTTCCTTCGAGCGCCGAGTCCCCCAAGATGTGGCTGGAGTGGCTGG
TAGCCTGGAGCTGGTCTCTGGACGGCCTGAGGGACTGCATCGCCACTGGTATCCAGTCCGTGCG
GGACTGTGACGGCACAGCTGTCATCACTGTGGCCTGCCTGCTCGTCTTGTTTGTGTGGTACTGT
TACCATGTGGGCCGAGAACAGCCCCGACCCCACGTATCCGTCAACTCCCTCCTGCAGGGTGTGG
ATGCCAACGGGTTACAGAACGGATCCATGTACTGCCAGTCCCCTGAGTGTGTGCGCTGCACGCA
CCACGACGGCCTCAACCAGAAGCTCTACCACAACCTGCAGGAGTACGCCAAGCGCTACTCATGG
TCTGGCATGGGCCGTATCCACAAGGGCATACGGGAGCAGGGCCGCTACCTCAGCAGCCAGCCCT
CTATCCAGAAGCCGGAGGTCTTCTTCCTGCCTGACCTCCCCACTACGCCCTACTTCCCCAGGGA
CGCCCAGAAGCACGATGTGGAGCTGCTGGAGCGGAACTTCCAGGCCATCCTCTGCGAGTTCGAG
GCACTCTACAAAGCCTTCTCTAACTGCAGCCTCCCTCAGGGGTGGAAAGTGAACAGCACCCCCA
GCGGGGAGTGGTTCACCTTTGACTTTGTCAGCCAGGGCGTTTGTGTCCCCAGGAACTGCAGGAA
GTGCCCTCGGACTTACCGCTTACTCGGCAGCCTCCGGACCTGTATTGGGAACAATGTTTTCGGG
AACGCCTGCATCTCAGTGCTGAGTCCTGGGACCGTGATCACGGAGCACTATGGGCCCACAAACA
TCCGAATCCGGTGCCACCTAGGTCTGAAGACTCCCAATGGCTGCGAGCTGGTGGTGGGGGGTGA
GCCCCAGTGCTGGGCAGAAGGCCGATGCCTACTCTTCGACGACTCCTTCCTGCACACCTCGTTC
CATGAAGGTTCTGCTGAGGATGGCCCACGGGTGGTCTTCATGGTGGACCTCTGGCACCCCAACG
TGGCAGCTGCTGAACGTCAGGCCCTGGATTTCATCTTTGCTCCAGGACGATGAGAACATTGCCT
GGGCCGGAGCCAGGCTGAGTGGATGGGTAGACTGTGTTATTGCCTACCCTGACTGTGCTCTGAT
CTGTGCTGGGAGCATGAATGGCTTCCTGTCACTGCGGGGCATCTTTCCTTTGGTTACTGGGAAC
TTCCTAGGTTTCTTTCCCTTTCTGGCTATTTGCTGGGACTTCTGACCTACTAGTGTGTCCCTTT
GGCTGTGACCAGAGGCTCTGTGCCTCTCCCGTCTGTGTCACTTTGCTACCTGGTGTCCTCTCCG
TGTTCTGGAATAGAGTAACCAAATGGCTGTTTTGTCTAAATGTCATCATCTTAAACTTGTGTAG
CTGTCTCAAGAGAGACCAAAAACAAAACAGAACAGAATGCCACAGACCAGAAGCCATTGAACCA
GACGGCTTGGCCTCCGAGGTTGGGGTTTCAAGGACCCTTCACTGTCCCAGAGCAAGAGACAGCC
TGCTGCCTACACATCTGGTTGGCCTCATTATGGGCTTGCCAGATACCATCAGGGTGGCGCGAAA
GTCAGAGCCTGGGGAATCCGTCATTATTGCTGATAGACCCCGAATCTATATAGGCCCTTGTGGT
GGTGACCAACCTGGGCCTTTTCTTTAGCCACAGCTTCCTACAGAGCGGGAGACCAAGTGAGGGT
TCTCAGGTCAGCCATAGAGCAAGGATCCACTTAGCTCACTGCCTACAGAAGCCTACTGGTGAGC
CCGGCCTGACACATGCTGCTGCTGTGGTTTCGAGTCCACAAGATTGTCAGGAGGCATGCTGGGT
CGAACCTTTGCCACCCACCATGTGATCAGAGTATCCATCATGCTCAGCAGTCTATTGCCTAAGC
GTTGACATTCATGATGCCTGTGTGTCCAACTTTCACACGCTAGACTCAGAGACGGCAGAGTTGT
CGCCAGGTCTGTCAGCACTGTCACAGGAGCCCATGGGTGTGATGACACCAGAAACAGCTTCAGA
CCCCCGGATCCACAGAGGTGGTGCTGAGTCTTCTGTCTCCTGAGAAGACGCAGTTCTGTTTCCA
AAGGGAAGGCCGGCTGGCGTTTCTGAGTCCAGCTGATGGGAGAATTCGGTCAGCCAGACACTCT
CAGTACACACTCCGGAGCGGTGGCCCCGGAGGGGTGGTCTGGAGCGGGACAGAATAAACAGGTT
GCCTTACAGGTC

hide sequence

RefSeq Acc Id:

XM_017598415 ⟹ XP_017453904

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	49,908,960 - 49,918,179 (+)	NCBI
mRatBN7.2	12	44,248,577 - 44,258,653 (+)	NCBI
Rnor_6.0	12	50,269,885 - 50,279,855 (+)	NCBI

Sequence:

show sequence

GCCGCCGAGCGCAGCGCGGGCGGCACCGGCTCCGCGGGGCTCCGGGCTCGGGTCGGGCAGCGGC
TGCGGGCGCGGCAGGGGGTGGCCGTGTCCCTGGGGCAGTGGCGTCGCCCTGGTCCCCGCAGCCG
CCCGCGCAGCTTCCTCCTTCTTCGCCTGTTTTCCTGGTCCCCCATCCTCCTCAGCATCACCCAC
TTTGACCCACCTCCCTGTCCCGTGAATTGTCACGCGCCCTAAACCTCCTTCTCACTTTTCCAGG
TTGGCGGTAACTCAGTTTCAAGAGTCAGGTATTACCTGTCACCAACCCAGTCTCCGGGCATCCG
AGGAAACCTCGGCAGTTTTAAGAGTTTCCTCAGAGTCTATGAACACCAGAAGCATGAGTCCCCA
TGAATATTCAGCGTGTGTGTTTTTGTCTTCCTGAACATTATAGTCAAGTGATTCTTTATTCAGC
CAACACCGGGACGGTGCCGGTTTGGACATCATGAAAGCCCTTTCATGGTGGCTGACTGCATTTG
CAAATGGGACCTAAGGCAGAGCCACCCTCCGCCCCACTGCAGTGACTTTTCCTAGTGGGCCCAG
CTGGCAGGCCTCACTGTTGATCAATGGAGCCCTTGGCAGGGACCGAGGGACAGTGGCAGCCATG
CCTCCCCCTGCCACCACCACTCCTTCTGCCGCCTGCTAACCTGCACGCTGTGGGTGCCCTAGAG
ACCCCCAGAGGACTGACCATCTGAGCCAGCTTCCTTCGAGCGCCGAGTCCCCCAAGATGTGGCT
GGAGTGGCTGGTAGCCTGGAGCTGGTCTCTGGACGGCCTGAGGGACTGCATCGCCACTGGTATC
CAGTCCGTGCGGGACTGTGACGGCACAGCTGTCATCACTGTGGCCTGCCTGCTCGTCTTGTTTG
TGTGGTACTGTTACCATGTGGGCCGAGAACAGCCCCGACCCCACGTATCCGTCAACTCCCTCCT
GCAGGGTGTGGATGCCAACGGGTTACAGAACGGATCCATGTACTGCCAGTCCCCTGAGTGTGTG
CGCTGCACGCACCACGACGGCCTCAACCAGAAGCTCTACCACAACCTGCAGGAGTACGCCAAGC
GCTACTCATGGTCTGGCATGGGCCGTATCCACAAGGGCATACGGGAGCAGGGCCGCTACCTCAG
CAGCCAGCCCTCTATCCAGAAGCCGGAGGTCTTCTTCCTGCCTGACCTCCCCACTACGCCCTAC
TTCCCCAGGGACGCCCAGAAGCACGATGTGGAGCTGCTGGAGCGGAACTTCCAGGCCATCCTCT
GCGAGTTCGAGGCACTCTACAAAGCCTTCTCTAACTGCAGCCTCCCTCAGGGGTGGAAAGTGAA
CAGCACCCCCAGCGGGGAGTGGTTCACCTTTGACTTTGTCAGCCAGGGCGTTTGTGTCCCCAGG
AACTGCAGGAAGTGCCCTCGGACTTACCGCTTACTCGGCAGCCTCCGGACCTGTATTGGGAACA
ATGTTTTCGGGAACGCCTGCATCTCAGTGCTGAGTCCTGGGACCGTGATCACGGAGCACTATGG
GCCCACAAACATCCGAATCCGGTGCCACCTAGGTCTGAAGACTCCCAATGGCTGCGAGCTGGTG
GTGGGGGGTGAGCCCCAGTGCTGGGCAGAAGGCCGATGCCTACTCTTCGACGACTCCTTCCTGC
ACACCTCGTTCCATGAAGGTTCTGCTGAGGATGGCCCACGGGTGGTCTTCATGGTGGACCTCTG
GCACCCCAACGTGGCAGCTGCTGAACGTCAGGCCCTGGATTTCATCTTTGCTCCAGGACGATGA
GAACATTGCCTGGGCCGGAGCCAGGCTGAGTGGATGGGTAGACTGTGTTATTGCCTACCCTGAC
TGTGCTCTGATCTGTGCTGGGAGCATGAATGGCTTCCTGTCACTGCGGGGCATCTTTCCTTTGG
TTACTGGGAACTTCCTAGGTTTCTTTCCCTTTCTGGCTATTTGCTGGGACTTCTGACCTACTAG
TGTGTCCCTTTGGCTGTGACCAGAGGCTCTGTGCCTCTCCCGTCTGTGTCACTTTGCTACCTGG
TGTCCTCTCCGTGTTCTGGAATAGAGTAACCAAATGGCTGTTTTGTCTAAATGTCATCATCTTA
AACTTGTGTAGCTGTCTCAAGAGAGACCAAAAACAAAACAGAACAGAATGCCACAGACCAGAAG
CCATTGAACCAGACGGCTTGGCCTCCGAGGTTGGGGTTTCAAGGACCCTTCACTGTCCCAGAGC
AAGAGACAGCCTGCTGCCTACACATCTGGTTGGCCTCATTATGGGCTTGCCAGATACCATCAGG
GTGGCGCGAAAGTCAGAGCCTGGGGAATCCGTCATTATTGCTGATAGACCCCGAATCTATATAG
GCCCTTGTGGTGGTGACCAACCTGGGCCTTTTCTTTAGCCACAGCTTCCTACAGAGCGGGAGAC
CAAGTGAGGGTTCTCAGGTCAGCCATAGAGCAAGGATCCACTTAGCTCACTGCCTACAGAAGCC
TACTGGTGAGCCCGGCCTGACACATGCTGCTGCTGTGGTTTCGAGTCCACAAGATTGTCAGGAG
GCATGCTGGGTCGAACCTTTGCCACCCACCATGTGATCAGAGTATCCATCATGCTCAGCAGTCT
ATTGCCTAAGCGTTGACATTCATGATGCCTGTGTGTCCAACTTTCACACGCTAGACTCAGAGAC
GGCAGAGTTGTCGCCAGGTCTGTCAGCACTGTCACAGGAGCCCATGGGTGTGATGACACCAGAA
ACAGCTTCAGACCCCCGGATCCACAGAGGTGGTGCTGAGTCTTCTGTCTCCTGAGAAGACGCAG
TTCTGTTTCCAAAGGGAAGGCCGGCTGGCGTTTCTGAGTCCAGCTGATGGGAGAATTCGGTCAG
CCAGACACTCTCAGTACACACTCCGGAGCGGTGGCCCCGGAGGGGTGGTCTGGAGCGGGACAGA
ATAAACAGGTTGCCTTACAGGTC

hide sequence

RefSeq Acc Id:

XM_017598416 ⟹ XP_017453905

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	49,908,960 - 49,918,179 (+)	NCBI
mRatBN7.2	12	44,248,577 - 44,258,653 (+)	NCBI
Rnor_6.0	12	50,269,885 - 50,279,855 (+)	NCBI

Sequence:

show sequence

GCCGCCGAGCGCAGCGCGGGCGGCACCGGCTCCGCGGGGCTCCGGGCTCGGGTCGGGCAGCGGC
TGCGGGCGCGGCAGGGGGTGGCCGTGTCCCTGGGGCAGTGGCGTCGCCCTGGTCCCCGCAGCCG
CCCGCGCAGGTTGGCGGTAACTCAGTTTCAAGAGTCAGGTATTACCTGTCACCAACCCAGTCTC
CGGGCATCCGAGGAAACCTCGGCAGTTTTAAGAGTTTCCTCAGAGTCTATGAACACCAGAGGAA
GCAGCTGGGACCGATGGCATCACCCATGGAGGATGGGTGTCAAGCCTAACTCGGGCTCTGCATC
TTGAGAAGAAGCTGACTTCTCCTCTCTCTGCTCCTGTACTTTTCCTAGAAGCATGAGTCCCCAT
GAATATTCAGCGTGTGTGTTTTTGTCTTCCTGAACATTATAGTCAAGTGATTCTTTATTCAGCC
AACACCGGGACGGTGCCGGTTTGGACATCATGAAAGCCCTTTCATGGTGGCTGACTGCATTTGC
AAATGGGACCTAAGGCAGAGCCACCCTCCGCCCCACTGCAGTGACTTTTCCTAGTGGGCCCAGC
TGGCAGGCCTCACTGTTGATCAATGGAGCCCTTGGCAGGGACCGAGGGACAGTGGCAGCCATGC
CTCCCCCTGCCACCACCACTCCTTCTGCCGCCTGCTAACCTGCACGCTGTGGGTGCCCTAGAGA
CCCCCAGAGGACTGACCATCTGAGCCAGCTTCCTTCGAGCGCCGAGTCCCCCAAGATGTGGCTG
GAGTGGCTGGTAGCCTGGAGCTGGTCTCTGGACGGCCTGAGGGACTGCATCGCCACTGGTATCC
AGTCCGTGCGGGACTGTGACGGCACAGCTGTCATCACTGTGGCCTGCCTGCTCGTCTTGTTTGT
GTGGTACTGTTACCATGTGGGCCGAGAACAGCCCCGACCCCACGTATCCGTCAACTCCCTCCTG
CAGGGTGTGGATGCCAACGGGTTACAGAACGGATCCATGTACTGCCAGTCCCCTGAGTGTGTGC
GCTGCACGCACCACGACGGCCTCAACCAGAAGCTCTACCACAACCTGCAGGAGTACGCCAAGCG
CTACTCATGGTCTGGCATGGGCCGTATCCACAAGGGCATACGGGAGCAGGGCCGCTACCTCAGC
AGCCAGCCCTCTATCCAGAAGCCGGAGGTCTTCTTCCTGCCTGACCTCCCCACTACGCCCTACT
TCCCCAGGGACGCCCAGAAGCACGATGTGGAGCTGCTGGAGCGGAACTTCCAGGCCATCCTCTG
CGAGTTCGAGGCACTCTACAAAGCCTTCTCTAACTGCAGCCTCCCTCAGGGGTGGAAAGTGAAC
AGCACCCCCAGCGGGGAGTGGTTCACCTTTGACTTTGTCAGCCAGGGCGTTTGTGTCCCCAGGA
ACTGCAGGAAGTGCCCTCGGACTTACCGCTTACTCGGCAGCCTCCGGACCTGTATTGGGAACAA
TGTTTTCGGGAACGCCTGCATCTCAGTGCTGAGTCCTGGGACCGTGATCACGGAGCACTATGGG
CCCACAAACATCCGAATCCGGTGCCACCTAGGTCTGAAGACTCCCAATGGCTGCGAGCTGGTGG
TGGGGGGTGAGCCCCAGTGCTGGGCAGAAGGCCGATGCCTACTCTTCGACGACTCCTTCCTGCA
CACCTCGTTCCATGAAGGTTCTGCTGAGGATGGCCCACGGGTGGTCTTCATGGTGGACCTCTGG
CACCCCAACGTGGCAGCTGCTGAACGTCAGGCCCTGGATTTCATCTTTGCTCCAGGACGATGAG
AACATTGCCTGGGCCGGAGCCAGGCTGAGTGGATGGGTAGACTGTGTTATTGCCTACCCTGACT
GTGCTCTGATCTGTGCTGGGAGCATGAATGGCTTCCTGTCACTGCGGGGCATCTTTCCTTTGGT
TACTGGGAACTTCCTAGGTTTCTTTCCCTTTCTGGCTATTTGCTGGGACTTCTGACCTACTAGT
GTGTCCCTTTGGCTGTGACCAGAGGCTCTGTGCCTCTCCCGTCTGTGTCACTTTGCTACCTGGT
GTCCTCTCCGTGTTCTGGAATAGAGTAACCAAATGGCTGTTTTGTCTAAATGTCATCATCTTAA
ACTTGTGTAGCTGTCTCAAGAGAGACCAAAAACAAAACAGAACAGAATGCCACAGACCAGAAGC
CATTGAACCAGACGGCTTGGCCTCCGAGGTTGGGGTTTCAAGGACCCTTCACTGTCCCAGAGCA
AGAGACAGCCTGCTGCCTACACATCTGGTTGGCCTCATTATGGGCTTGCCAGATACCATCAGGG
TGGCGCGAAAGTCAGAGCCTGGGGAATCCGTCATTATTGCTGATAGACCCCGAATCTATATAGG
CCCTTGTGGTGGTGACCAACCTGGGCCTTTTCTTTAGCCACAGCTTCCTACAGAGCGGGAGACC
AAGTGAGGGTTCTCAGGTCAGCCATAGAGCAAGGATCCACTTAGCTCACTGCCTACAGAAGCCT
ACTGGTGAGCCCGGCCTGACACATGCTGCTGCTGTGGTTTCGAGTCCACAAGATTGTCAGGAGG
CATGCTGGGTCGAACCTTTGCCACCCACCATGTGATCAGAGTATCCATCATGCTCAGCAGTCTA
TTGCCTAAGCGTTGACATTCATGATGCCTGTGTGTCCAACTTTCACACGCTAGACTCAGAGACG
GCAGAGTTGTCGCCAGGTCTGTCAGCACTGTCACAGGAGCCCATGGGTGTGATGACACCAGAAA
CAGCTTCAGACCCCCGGATCCACAGAGGTGGTGCTGAGTCTTCTGTCTCCTGAGAAGACGCAGT
TCTGTTTCCAAAGGGAAGGCCGGCTGGCGTTTCTGAGTCCAGCTGATGGGAGAATTCGGTCAGC
CAGACACTCTCAGTACACACTCCGGAGCGGTGGCCCCGGAGGGGTGGTCTGGAGCGGGACAGAA
TAAACAGGTTGCCTTACAGGTC

hide sequence

RefSeq Acc Id:

XM_017598417 ⟹ XP_017453906

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	49,908,960 - 49,918,179 (+)	NCBI
mRatBN7.2	12	44,248,577 - 44,258,653 (+)	NCBI
Rnor_6.0	12	50,269,885 - 50,279,855 (+)	NCBI

Sequence:

show sequence

GCCGCCGAGCGCAGCGCGGGCGGCACCGGCTCCGCGGGGCTCCGGGCTCGGGTCGGGCAGCGGC
TGCGGGCGCGGCAGGGGGTGGCCGTGTCCCTGGGGCAGTGGCGTCGCCCTGGTCCCCGCAGCCG
CCCGCGCAGCTTCCTCCTTCTTCGCCTGTTTTCCTGGTCCCCCATCCTCCTCAGCATCACCCAC
TTTGACCCACCTCCCTGTCCCGTGAATTGTCACGCGCCCTAAACCTCCTTCTCACTTTTCCAGG
TTGGCGGTAACTCAGTTTCAAGAGTCAGGTATTACCTGTCACCAACCCAGTCTCCGGGCATCCG
AGGAAACCTCGGCAGTTTTAAGAGTTTCCTCAGAGTCTATGAACACCAGGTTTGGACATCATGA
AAGCCCTTTCATGGTGGCTGACTGCATTTGCAAATGGGACCTAAGGCAGAGCCACCCTCCGCCC
CACTGCAGTGACTTTTCCTAGTGGGCCCAGCTGGCAGGCCTCACTGTTGATCAATGGAGCCCTT
GGCAGGGACCGAGGGACAGTGGCAGCCATGCCTCCCCCTGCCACCACCACTCCTTCTGCCGCCT
GCTAACCTGCACGCTGTGGGTGCCCTAGAGACCCCCAGAGGACTGACCATCTGAGCCAGCTTCC
TTCGAGCGCCGAGTCCCCCAAGATGTGGCTGGAGTGGCTGGTAGCCTGGAGCTGGTCTCTGGAC
GGCCTGAGGGACTGCATCGCCACTGGTATCCAGTCCGTGCGGGACTGTGACGGCACAGCTGTCA
TCACTGTGGCCTGCCTGCTCGTCTTGTTTGTGTGGTACTGTTACCATGTGGGCCGAGAACAGCC
CCGACCCCACGTATCCGTCAACTCCCTCCTGCAGGGTGTGGATGCCAACGGGTTACAGAACGGA
TCCATGTACTGCCAGTCCCCTGAGTGTGTGCGCTGCACGCACCACGACGGCCTCAACCAGAAGC
TCTACCACAACCTGCAGGAGTACGCCAAGCGCTACTCATGGTCTGGCATGGGCCGTATCCACAA
GGGCATACGGGAGCAGGGCCGCTACCTCAGCAGCCAGCCCTCTATCCAGAAGCCGGAGGTCTTC
TTCCTGCCTGACCTCCCCACTACGCCCTACTTCCCCAGGGACGCCCAGAAGCACGATGTGGAGC
TGCTGGAGCGGAACTTCCAGGCCATCCTCTGCGAGTTCGAGGCACTCTACAAAGCCTTCTCTAA
CTGCAGCCTCCCTCAGGGGTGGAAAGTGAACAGCACCCCCAGCGGGGAGTGGTTCACCTTTGAC
TTTGTCAGCCAGGGCGTTTGTGTCCCCAGGAACTGCAGGAAGTGCCCTCGGACTTACCGCTTAC
TCGGCAGCCTCCGGACCTGTATTGGGAACAATGTTTTCGGGAACGCCTGCATCTCAGTGCTGAG
TCCTGGGACCGTGATCACGGAGCACTATGGGCCCACAAACATCCGAATCCGGTGCCACCTAGGT
CTGAAGACTCCCAATGGCTGCGAGCTGGTGGTGGGGGGTGAGCCCCAGTGCTGGGCAGAAGGCC
GATGCCTACTCTTCGACGACTCCTTCCTGCACACCTCGTTCCATGAAGGTTCTGCTGAGGATGG
CCCACGGGTGGTCTTCATGGTGGACCTCTGGCACCCCAACGTGGCAGCTGCTGAACGTCAGGCC
CTGGATTTCATCTTTGCTCCAGGACGATGAGAACATTGCCTGGGCCGGAGCCAGGCTGAGTGGA
TGGGTAGACTGTGTTATTGCCTACCCTGACTGTGCTCTGATCTGTGCTGGGAGCATGAATGGCT
TCCTGTCACTGCGGGGCATCTTTCCTTTGGTTACTGGGAACTTCCTAGGTTTCTTTCCCTTTCT
GGCTATTTGCTGGGACTTCTGACCTACTAGTGTGTCCCTTTGGCTGTGACCAGAGGCTCTGTGC
CTCTCCCGTCTGTGTCACTTTGCTACCTGGTGTCCTCTCCGTGTTCTGGAATAGAGTAACCAAA
TGGCTGTTTTGTCTAAATGTCATCATCTTAAACTTGTGTAGCTGTCTCAAGAGAGACCAAAAAC
AAAACAGAACAGAATGCCACAGACCAGAAGCCATTGAACCAGACGGCTTGGCCTCCGAGGTTGG
GGTTTCAAGGACCCTTCACTGTCCCAGAGCAAGAGACAGCCTGCTGCCTACACATCTGGTTGGC
CTCATTATGGGCTTGCCAGATACCATCAGGGTGGCGCGAAAGTCAGAGCCTGGGGAATCCGTCA
TTATTGCTGATAGACCCCGAATCTATATAGGCCCTTGTGGTGGTGACCAACCTGGGCCTTTTCT
TTAGCCACAGCTTCCTACAGAGCGGGAGACCAAGTGAGGGTTCTCAGGTCAGCCATAGAGCAAG
GATCCACTTAGCTCACTGCCTACAGAAGCCTACTGGTGAGCCCGGCCTGACACATGCTGCTGCT
GTGGTTTCGAGTCCACAAGATTGTCAGGAGGCATGCTGGGTCGAACCTTTGCCACCCACCATGT
GATCAGAGTATCCATCATGCTCAGCAGTCTATTGCCTAAGCGTTGACATTCATGATGCCTGTGT
GTCCAACTTTCACACGCTAGACTCAGAGACGGCAGAGTTGTCGCCAGGTCTGTCAGCACTGTCA
CAGGAGCCCATGGGTGTGATGACACCAGAAACAGCTTCAGACCCCCGGATCCACAGAGGTGGTG
CTGAGTCTTCTGTCTCCTGAGAAGACGCAGTTCTGTTTCCAAAGGGAAGGCCGGCTGGCGTTTC
TGAGTCCAGCTGATGGGAGAATTCGGTCAGCCAGACACTCTCAGTACACACTCCGGAGCGGTGG
CCCCGGAGGGGTGGTCTGGAGCGGGACAGAATAAACAGGTTGCCTTACAGGTC

hide sequence

RefSeq Acc Id:

XM_039089649 ⟹ XP_038945577

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	49,911,064 - 49,918,179 (+)	NCBI
mRatBN7.2	12	44,250,901 - 44,258,653 (+)	NCBI

RefSeq Acc Id:

XM_039089651 ⟹ XP_038945579

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	49,908,960 - 49,918,179 (+)	NCBI
mRatBN7.2	12	44,248,577 - 44,258,653 (+)	NCBI

RefSeq Acc Id:

XM_039089652 ⟹ XP_038945580

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	49,908,960 - 49,918,179 (+)	NCBI
mRatBN7.2	12	44,248,577 - 44,258,653 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001009716	(Get FASTA)	NCBI Sequence Viewer
	XP_008767573	(Get FASTA)	NCBI Sequence Viewer
	XP_017453903	(Get FASTA)	NCBI Sequence Viewer
	XP_017453904	(Get FASTA)	NCBI Sequence Viewer
	XP_017453905	(Get FASTA)	NCBI Sequence Viewer
	XP_017453906	(Get FASTA)	NCBI Sequence Viewer
	XP_038945577	(Get FASTA)	NCBI Sequence Viewer
	XP_038945579	(Get FASTA)	NCBI Sequence Viewer
	XP_038945580	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH88863	(Get FASTA)	NCBI Sequence Viewer
	EDM13994	(Get FASTA)	NCBI Sequence Viewer
	EDM13995	(Get FASTA)	NCBI Sequence Viewer
	EDM13996	(Get FASTA)	NCBI Sequence Viewer
	EDM13997	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000068694
	ENSRNOP00000068694.1
	ENSRNOP00055002520
	ENSRNOP00060007644
	ENSRNOP00065006063
GenBank Protein	Q5HZW3	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001009716 ⟸ NM_001009716

- UniProtKB:

Q5HZW3 (UniProtKB/Swiss-Prot), A6J258 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MWLEWLVAWSWSLDGLRDCIATGIQSVRDCDGTAVITVACLLVLFVWYCYHVGREQPRPHVSVN
SLLQGVDANGLQNGSMYCQSPECVRCTHHDGLNQKLYHNLQEYAKRYSWSGMGRIHKGIREQGR
YLSSQPSIQKPEVFFLPDLPTTPYFPRDAQKHDVELLERNFQAILCEFEALYKAFSNCSLPQGW
KVNSTPSGEWFTFDFVSQGVCVPRNCRKCPRTYRLLGSLRTCIGNNVFGNACISVLSPGTVITE
HYGPTNIRIRCHLGLKTPNGCELVVGGEPQCWAEGRCLLFDDSFLHTSFHEGSAEDGPRVVFMV
DLWHPNVAAAERQALDFIFAPGR

hide sequence

RefSeq Acc Id:	XP_008767573 ⟸ XM_008769351
- Peptide Label:	isoform X1
- UniProtKB:	Q5HZW3 (UniProtKB/Swiss-Prot), A6J258 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWLEWLVAWSWSLDGLRDCIATGIQSVRDCDGTAVITVACLLVLFVWYCYHVGREQPRPHVSVN SLLQGVDANGLQNGSMYCQSPECVRCTHHDGLNQKLYHNLQEYAKRYSWSGMGRIHKGIREQGR YLSSQPSIQKPEVFFLPDLPTTPYFPRDAQKHDVELLERNFQAILCEFEALYKAFSNCSLPQGW KVNSTPSGEWFTFDFVSQGVCVPRNCRKCPRTYRLLGSLRTCIGNNVFGNACISVLSPGTVITE HYGPTNIRIRCHLGLKTPNGCELVVGGEPQCWAEGRCLLFDDSFLHTSFHEGSAEDGPRVVFMV DLWHPNVAAAERQALDFIFAPGR hide sequence

RefSeq Acc Id:	XP_017453903 ⟸ XM_017598414
- Peptide Label:	isoform X1
- UniProtKB:	Q5HZW3 (UniProtKB/Swiss-Prot), A6J258 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWLEWLVAWSWSLDGLRDCIATGIQSVRDCDGTAVITVACLLVLFVWYCYHVGREQPRPHVSVN SLLQGVDANGLQNGSMYCQSPECVRCTHHDGLNQKLYHNLQEYAKRYSWSGMGRIHKGIREQGR YLSSQPSIQKPEVFFLPDLPTTPYFPRDAQKHDVELLERNFQAILCEFEALYKAFSNCSLPQGW KVNSTPSGEWFTFDFVSQGVCVPRNCRKCPRTYRLLGSLRTCIGNNVFGNACISVLSPGTVITE HYGPTNIRIRCHLGLKTPNGCELVVGGEPQCWAEGRCLLFDDSFLHTSFHEGSAEDGPRVVFMV DLWHPNVAAAERQALDFIFAPGR hide sequence

RefSeq Acc Id:	XP_017453904 ⟸ XM_017598415
- Peptide Label:	isoform X1
- UniProtKB:	Q5HZW3 (UniProtKB/Swiss-Prot), A6J258 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWLEWLVAWSWSLDGLRDCIATGIQSVRDCDGTAVITVACLLVLFVWYCYHVGREQPRPHVSVN SLLQGVDANGLQNGSMYCQSPECVRCTHHDGLNQKLYHNLQEYAKRYSWSGMGRIHKGIREQGR YLSSQPSIQKPEVFFLPDLPTTPYFPRDAQKHDVELLERNFQAILCEFEALYKAFSNCSLPQGW KVNSTPSGEWFTFDFVSQGVCVPRNCRKCPRTYRLLGSLRTCIGNNVFGNACISVLSPGTVITE HYGPTNIRIRCHLGLKTPNGCELVVGGEPQCWAEGRCLLFDDSFLHTSFHEGSAEDGPRVVFMV DLWHPNVAAAERQALDFIFAPGR hide sequence

RefSeq Acc Id:	XP_017453906 ⟸ XM_017598417
- Peptide Label:	isoform X1
- UniProtKB:	Q5HZW3 (UniProtKB/Swiss-Prot), A6J258 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWLEWLVAWSWSLDGLRDCIATGIQSVRDCDGTAVITVACLLVLFVWYCYHVGREQPRPHVSVN SLLQGVDANGLQNGSMYCQSPECVRCTHHDGLNQKLYHNLQEYAKRYSWSGMGRIHKGIREQGR YLSSQPSIQKPEVFFLPDLPTTPYFPRDAQKHDVELLERNFQAILCEFEALYKAFSNCSLPQGW KVNSTPSGEWFTFDFVSQGVCVPRNCRKCPRTYRLLGSLRTCIGNNVFGNACISVLSPGTVITE HYGPTNIRIRCHLGLKTPNGCELVVGGEPQCWAEGRCLLFDDSFLHTSFHEGSAEDGPRVVFMV DLWHPNVAAAERQALDFIFAPGR hide sequence

RefSeq Acc Id:	XP_017453905 ⟸ XM_017598416
- Peptide Label:	isoform X1
- UniProtKB:	Q5HZW3 (UniProtKB/Swiss-Prot), A6J258 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWLEWLVAWSWSLDGLRDCIATGIQSVRDCDGTAVITVACLLVLFVWYCYHVGREQPRPHVSVN SLLQGVDANGLQNGSMYCQSPECVRCTHHDGLNQKLYHNLQEYAKRYSWSGMGRIHKGIREQGR YLSSQPSIQKPEVFFLPDLPTTPYFPRDAQKHDVELLERNFQAILCEFEALYKAFSNCSLPQGW KVNSTPSGEWFTFDFVSQGVCVPRNCRKCPRTYRLLGSLRTCIGNNVFGNACISVLSPGTVITE HYGPTNIRIRCHLGLKTPNGCELVVGGEPQCWAEGRCLLFDDSFLHTSFHEGSAEDGPRVVFMV DLWHPNVAAAERQALDFIFAPGR hide sequence

RefSeq Acc Id:

ENSRNOP00000068694 ⟸ ENSRNOT00000079190

RefSeq Acc Id:

ENSRNOP00000073904 ⟸ ENSRNOT00000086782

RefSeq Acc Id:	XP_038945580 ⟸ XM_039089652
- Peptide Label:	isoform X1
- UniProtKB:	Q5HZW3 (UniProtKB/Swiss-Prot), A6J258 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038945579 ⟸ XM_039089651
- Peptide Label:	isoform X1
- UniProtKB:	Q5HZW3 (UniProtKB/Swiss-Prot), A6J258 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038945577 ⟸ XM_039089649
- Peptide Label:	isoform X1
- UniProtKB:	Q5HZW3 (UniProtKB/Swiss-Prot), A6J258 (UniProtKB/TrEMBL)

Protein Domains

Aspartyl/asparaginy/proline hydroxylase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5HZW3-F1-model_v2	AlphaFold	Q5HZW3	1-343	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306020	AgrOrtholog
BioCyc Gene	G2FUF-18870	BioCyc
Ensembl Genes	ENSRNOG00000061004	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
	ENSRNOG00055002112	UniProtKB/Swiss-Prot
	ENSRNOG00060006228	UniProtKB/Swiss-Prot
	ENSRNOG00065005753	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000079190	ENTREZGENE
	ENSRNOT00000079190.2	UniProtKB/Swiss-Prot
	ENSRNOT00055003375	UniProtKB/Swiss-Prot
	ENSRNOT00060010248	UniProtKB/Swiss-Prot
	ENSRNOT00065008598	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7313227	IMAGE-MGC_LOAD
InterPro	Asp/Arg/Pro-Hydrxlase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	IPNS-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:364948	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE	MGC:105590	IMAGE-MGC_LOAD
NCBI Gene	364948	ENTREZGENE
PANTHER	ASPARTATE BETA-HYDROXYLASE DOMAIN-CONTAINING PROTEIN 2	UniProtKB/Swiss-Prot
	ASPARTATE BETA-HYDROXYLASE DOMAIN-CONTAINING PROTEIN 2	UniProtKB/Swiss-Prot
	ASPARTATE BETA-HYDROXYLASE DOMAIN-CONTAINING PROTEIN 2	UniProtKB/TrEMBL
	ASPARTATE BETA-HYDROXYLASE DOMAIN-CONTAINING PROTEIN 2	UniProtKB/TrEMBL
Pfam	Asp_Arg_Hydrox	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Asphd2	PhenoGen
RatGTEx	ENSRNOG00000061004	RatGTEx
	ENSRNOG00055002112	RatGTEx
	ENSRNOG00060006228	RatGTEx
	ENSRNOG00065005753	RatGTEx
Superfamily-SCOP	Clavaminate synthase-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A6J258	ENTREZGENE, UniProtKB/TrEMBL
	ASPH2_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2006-03-30	Asphd2	aspartate beta-hydroxylase domain containing 2	RGD1306020	similar to aspartyl beta-hydroxylase; calsequestrin-binding protein; 3110001L23Rik	Symbol and Name updated	1299863	APPROVED
2005-12-06	RGD1306020	similar to aspartyl beta-hydroxylase; calsequestrin-binding protein; 3110001L23Rik	RGD1306020_predicted	similar to aspartyl beta-hydroxylase; calsequestrin-binding protein; 3110001L23Rik (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1306020_predicted	similar to aspartyl beta-hydroxylase; calsequestrin-binding protein; 3110001L23Rik (predicted)	LOC364948_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC364948_predicted	similar to aspartyl beta-hydroxylase; calsequestrin-binding protein; 3110001L23Rik (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar