Mbd1 (methyl-CpG binding domain protein 1)

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Gene: Mbd1 (methyl-CpG binding domain protein 1) Rattus norvegicus

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Symbol:

Mbd1

Name:

methyl-CpG binding domain protein 1

RGD ID:

1305980

Description:

Enables chromatin binding activity. Involved in several processes, including negative regulation of astrocyte differentiation; regulation of gene expression; and response to estradiol. Located in chromatin. Biomarker of transient cerebral ischemia and visual epilepsy. Human ortholog(s) of this gene implicated in lung cancer. Orthologous to human MBD1 (methyl-CpG binding domain protein 1); PARTICIPATES IN DNA modification pathway; INTERACTS WITH 2,4-dinitrotoluene; 6-propyl-2-thiouracil; amitrole.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC291439; methyl-CpG-binding domain protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	70,145,093 - 70,159,744 (+)	NCBI		GRCr8
mRatBN7.2	18	67,869,870 - 67,884,501 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	67,869,992 - 67,886,554 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	69,978,196 - 69,992,672 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	70,643,315 - 70,657,818 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	68,509,485 - 68,523,993 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	70,248,568 - 70,263,190 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	70,248,713 - 70,263,164 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	69,390,120 - 69,404,741 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	71,068,257 - 71,082,734 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	71,141,457 - 71,155,910 (+)	NCBI
Celera	18	66,048,059 - 66,062,538 (+)	NCBI		Celera
Cytogenetic Map	18	q12.2	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

intellectual disability (ISO)

lung cancer (ISO)

Prostatic Neoplasms (ISO)

transient cerebral ischemia (IEP)

visual epilepsy (IEP)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO)

2,4-dinitrotoluene (EXP)

2-butan-2-yl-4-[4-[4-[4-[[2-(2,4-dichlorophenyl)-2-(1,2,4-triazol-1-ylmethyl)-1,3-dioxolan-4-yl]methoxy]phenyl]-1-piperazinyl]phenyl]-1,2,4-triazol-3-one (ISO)

4-hydroxyphenyl retinamide (ISO)

5-aza-2'-deoxycytidine (ISO)

6-propyl-2-thiouracil (EXP)

acrolein (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

alpha-pinene (ISO)

amitrole (EXP)

aristolochic acid A (ISO)

Aroclor 1254 (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bortezomib (ISO)

butanal (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

carbon nanotube (ISO)

chlordecone (ISO)

chloroprene (ISO)

choline (ISO)

ciguatoxin CTX1B (ISO)

clofibrate (EXP)

cocaine (EXP)

copper atom (ISO)

copper(0) (ISO)

copper(II) sulfate (ISO)

coumarin (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

DDE (ISO)

Dibutyl phosphate (ISO)

dioxygen (ISO)

elemental selenium (ISO)

enzyme inhibitor (ISO)

epoxiconazole (ISO)

fenthion (ISO)

fluoxetine (EXP)

flutamide (EXP)

folic acid (ISO)

FR900359 (ISO)

gallic acid (ISO)

gentamycin (EXP)

isoprenaline (ISO)

itraconazole (ISO)

L-methionine (ISO)

methimazole (EXP)

methotrexate (ISO)

methyl methanesulfonate (ISO)

morphine (ISO)

N-ethyl-N-nitrosourea (ISO)

N-nitrosodiethylamine (ISO)

ozone (ISO)

paracetamol (ISO)

paraquat (ISO)

pentachlorophenol (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (EXP,ISO)

phosgene (ISO)

pirinixic acid (ISO)

propiconazole (EXP)

resveratrol (ISO)

selenium atom (ISO)

sodium arsenite (ISO)

sodium fluoride (ISO)

sulfadimethoxine (EXP)

tamoxifen (ISO)

tetrachloromethane (EXP,ISO)

thioacetamide (EXP)

thiram (ISO)

titanium dioxide (ISO)

urethane (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vitamin E (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

epigenetic regulation of gene expression (IEP)

negative regulation of astrocyte differentiation (IDA)

negative regulation of gene expression (IDA)

neuron differentiation (IEP)

response to cocaine (IEP)

response to estradiol (IEP)

response to nutrient levels (IEP)

response to organic cyclic compound (IEP)

response to xenobiotic stimulus (IEP)

ventricular cardiac muscle tissue development (IEP)

Cellular Component

chromatin (IDA,ISO)

cytoplasm (ISO)

heterochromatin (ISO)

intracellular membrane-bounded organelle (ISO)

nuclear matrix (ISO)

nuclear speck (ISO)

nucleolus (ISO)

nucleoplasm (ISO)

nucleus (ISO)

Molecular Function

chromatin binding (IDA)

DNA binding (ISO)

double-stranded methylated DNA binding (ISO)

methyl-CpG binding (ISO)

protein binding (ISO)

unmethylated CpG binding (ISO)

zinc ion binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

DNA modification pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	The loss of methyl-CpG binding protein 1 leads to autism-like behavioral deficits.	Allan AM, etal., Hum Mol Genet. 2008 Jul 1;17(13):2047-57. doi: 10.1093/hmg/ddn102. Epub 2008 Apr 1.
2.	On how mammalian transcription factors recognize methylated DNA.	Buck-Koehntop BA and Defossez PA, Epigenetics. 2013 Feb;8(2):131-7. doi: 10.4161/epi.23632. Epub 2013 Jan 16.
3.	Fluoxetine and cocaine induce the epigenetic factors MeCP2 and MBD1 in adult rat brain.	Cassel S, etal., Mol Pharmacol. 2006 Aug;70(2):487-92. Epub 2006 May 2.
4.	Kindling induces the mRNA expression of methyl DNA-binding factors in the adult rat hippocampus.	Francis J, etal., Neuroscience. 2002;113(1):79-87.
5.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
6.	A folate- and methyl-deficient diet alters the expression of DNA methyltransferases and methyl CpG binding proteins involved in epigenetic gene silencing in livers of F344 rats.	Ghoshal K, etal., J Nutr. 2006 Jun;136(6):1522-7.
7.	Methyl-CpG binding domain 1 gene polymorphisms and risk of primary lung cancer.	Jang JS, etal., Cancer Epidemiol Biomarkers Prev. 2005 Nov;14(11 Pt 1):2474-80.
8.	Transient forebrain ischemia alters the mRNA expression of methyl DNA-binding factors in the adult rat hippocampus.	Jung BP, etal., Neuroscience. 2002;115(2):515-24.
9.	Epigenetic regulation of neonatal cardiomyocytes differentiation.	Kou CY, etal., Biochem Biophys Res Commun. 2010 Sep 17;400(2):278-83. doi: 10.1016/j.bbrc.2010.08.064. Epub 2010 Aug 22.
10.	Epigenetic regulation of the stem cell mitogen Fgf-2 by Mbd1 in adult neural stem/progenitor cells.	Li X, etal., J Biol Chem. 2008 Oct 10;283(41):27644-52. doi: 10.1074/jbc.M804899200. Epub 2008 Aug 8.
11.	Methyl-CpG binding domain 1 gene polymorphisms and lung cancer risk in a Chinese population.	Liu H, etal., Biomarkers. 2008 Sep;13(6):607-17. doi: 10.1080/13547500802168031 .
12.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
13.	GOA pipeline	RGD automated data pipeline
14.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
15.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
16.	Methyl-CpG binding proteins are involved in restricting differentiation plasticity in neurons.	Setoguchi H, etal., J Neurosci Res. 2006 Oct;84(5):969-79.
17.	Cellular epigenetic modifications of neural stem cell differentiation.	Singh RP, etal., Cell Transplant. 2009;18(10):1197-211. doi: 10.3727/096368909X12483162197204. Epub 2009 Aug 5.
18.	Neonatal exposure to estradiol/bisphenol A alters promoter methylation and expression of Nsbp1 and Hpcal1 genes and transcriptional programs of Dnmt3a/b and Mbd2/4 in the rat prostate gland throughout life.	Tang WY, etal., Endocrinology. 2012 Jan;153(1):42-55. doi: 10.1210/en.2011-1308. Epub 2011 Nov 22.

Additional References at PubMed

PMID:9774669	PMID:11371345	PMID:12477932	PMID:14519686	PMID:15777793	PMID:17546630	PMID:18604195	PMID:25284789	PMID:29276034	PMID:32638524

Genomics

Comparative Map Data

Mbd1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	70,145,093 - 70,159,744 (+)	NCBI		GRCr8
mRatBN7.2	18	67,869,870 - 67,884,501 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	67,869,992 - 67,886,554 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	69,978,196 - 69,992,672 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	70,643,315 - 70,657,818 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	68,509,485 - 68,523,993 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	70,248,568 - 70,263,190 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	70,248,713 - 70,263,164 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	69,390,120 - 69,404,741 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	71,068,257 - 71,082,734 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	71,141,457 - 71,155,910 (+)	NCBI
Celera	18	66,048,059 - 66,062,538 (+)	NCBI		Celera
Cytogenetic Map	18	q12.2	NCBI

MBD1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	50,266,885 - 50,281,767 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	50,266,882 - 50,281,774 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	18	47,793,255 - 47,808,137 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	46,049,214 - 46,062,142 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	18	44,651,771 - 44,664,698 (-)	NCBI		Celera
Cytogenetic Map	18	q21.1	NCBI
HuRef	18	44,647,697 - 44,662,584 (-)	NCBI		HuRef
CHM1_1	18	47,788,841 - 47,803,733 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	18	50,468,627 - 50,483,509 (-)	NCBI		T2T-CHM13v2.0

Mbd1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	74,400,676 - 74,415,808 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	74,400,676 - 74,415,803 (+)	Ensembl		GRCm39 Ensembl
GRCm38	18	74,267,605 - 74,282,737 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	74,267,605 - 74,282,732 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	74,427,942 - 74,442,338 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	74,393,660 - 74,408,054 (+)	NCBI		MGSCv36	mm8
Celera	18	75,497,613 - 75,512,033 (+)	NCBI		Celera
Cytogenetic Map	18	E2	NCBI
cM Map	18	50.7	NCBI

Mbd1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	35,319,810 - 35,334,678 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955402	35,320,755 - 35,334,751 (-)	NCBI	ChiLan1.0	ChiLan1.0

MBD1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	17	67,796,740 - 67,809,690 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	18	53,489,343 - 53,502,163 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	43,647,395 - 43,662,266 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	46,996,905 - 47,009,831 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	18	46,996,905 - 47,009,831 (-)	Ensembl	panpan1.1		panPan2

MBD1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	78,597,688 - 78,611,303 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	78,597,746 - 78,651,472 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	78,002,061 - 78,017,756 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	78,661,476 - 78,677,177 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	78,661,468 - 78,674,941 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	78,374,132 - 78,389,826 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	78,406,559 - 78,422,248 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	78,691,272 - 78,706,975 (+)	NCBI		UU_Cfam_GSD_1.0

Mbd1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	37,609,864 - 37,629,471 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936497	12,848,874 - 12,871,639 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936497	12,848,918 - 12,868,504 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MBD1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	99,900,801 - 99,917,323 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	99,848,193 - 99,917,347 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	109,589,957 - 109,606,298 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MBD1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	30,675,419 - 30,690,111 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	18	30,675,653 - 30,685,946 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666050	4,822,001 - 4,835,406 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mbd1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624778	13,896,447 - 13,907,656 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624778	13,892,179 - 13,907,576 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Mbd1
19 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	392
Count of miRNA genes:	213
Interacting mature miRNAs:	250
Transcripts:	ENSRNOT00000032202
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1331733	Bp233	Blood pressure QTL 233	3.97196		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	24796977	79788953	Rat
12904069	Cm123	Cardiac mass QTL 123		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	18	52539763	76104388	Rat
12904070	Cm124	Cardiac mass QTL 124		0.01	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	18	52539763	76104388	Rat
2303584	Gluco55	Glucose level QTL 55	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	18	48520044	83828827	Rat
12904071	Am18	Aortic mass QTL 18		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	18	52539763	76104388	Rat
12904067	Cm122	Cardiac mass QTL 122		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	18	52539763	76104388	Rat
61384	Bp48	Blood pressure QTL 48	19.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	60622311	77209844	Rat
1331741	Bp232	Blood pressure QTL 232	3.59112		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	18	21372893	83213037	Rat
2301417	Bp319	Blood pressure QTL 319		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	52539763	76104388	Rat
1298072	Cia26	Collagen induced arthritis QTL 26	3.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	18	54709769	83828827	Rat
12904073	Kidm71	Kidney mass QTL 71		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	18	52539763	76104388	Rat
6903353	Bp353	Blood pressure QTL 353	2.8		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	18	59796478	83828827	Rat
738008	Hcar14	Hepatocarcinoma resistance QTL 14	4.3		liver integrity trait (VT:0010547)	liver nonremodeling tumorous lesion number (CMO:0001462)	18	51464733	83218561	Rat
6903356	Bp354	Blood pressure QTL 354	4.6		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	59796478	83828827	Rat
631518	Bw11	Body weight QTL 11	2.8		body mass (VT:0001259)	body weight (CMO:0000012)	18	35870723	80870723	Rat
6893683	Bw110	Body weight QTL 110	2.7	0.002	body mass (VT:0001259)	body weight (CMO:0000012)	18	43345022	83828827	Rat
8694366	Abfw8	Abdominal fat weight QTL 8	6.38	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	18	46640675	83828827	Rat
631509	Sald2	Serum aldosterone level QTL 2	2.9		blood aldosterone amount (VT:0005346)	serum aldosterone level (CMO:0000487)	18	52539763	69140759	Rat
2300157	Bmd66	Bone mineral density QTL 66	13.1	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	18	28964853	73964853	Rat
738005	Anxrr11	Anxiety related response QTL 11	3.4		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	18	30039813	75039813	Rat
631274	Sprol1	Serum protein level QTL 1	5.3		blood total protein amount (VT:0005567)	serum total protein level (CMO:0000661)	18	31393320	77209694	Rat
9589041	Epfw12	Epididymal fat weight QTL 12	17.08	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	18	46640675	83828827	Rat
8694432	Bw165	Body weight QTL 165	3.81	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	18	46640675	83828827	Rat
70185	BpQTLcluster15	Blood pressure QTL cluster 15	4.61		arterial blood pressure trait (VT:2000000)	absolute change in systolic blood pressure (CMO:0000607)	18	59712417	76477814	Rat
2293704	Bss35	Bone structure and strength QTL 35	4.59	0.0002	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	18	28964853	73964853	Rat
9589816	Gluco68	Glucose level QTL 68	7.25	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	18	29792965	74792965	Rat
2325839	Bp348	Blood pressure QTL 348		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	25570985	70570985	Rat
1600373	Mamtr6	Mammary tumor resistance QTL 6			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	18	19278901	83218561	Rat
8694378	Bw157	Body weight QTL 157	3.59	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	18	29792965	74792965	Rat
1331770	Bp234	Blood pressure QTL 234	3.807		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	59796478	71893566	Rat
2303571	Bw92	Body weight QTL 92	3		body mass (VT:0001259)	body weight (CMO:0000012)	18	48520044	83828827	Rat
2300177	Bmd65	Bone mineral density QTL 65	19.7	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	18	28964853	73964853	Rat
1598826	Anxrr20	Anxiety related response QTL 20	3.04		body movement coordination trait (VT:0005424)	number of rearing movements in an experimental apparatus (CMO:0001752)	18	41432971	83828827	Rat
2301969	Bp324	Blood pressure QTL 324	4.05		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	59712417	76477814	Rat
631675	Iddm15	Insulin dependent diabetes mellitus QTL 15			urine glucose amount (VT:0001758)	percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)	18	60622311	77209844	Rat
1578667	Bss21	Bone structure and strength QTL 21	3.5		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	18	11791518	83218561	Rat
2303120	Mamtr8	Mammary tumor resistance QTL 8		0.001	mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	18	31359408	83218561	Rat
12880368	Bw187	Body weight QTL 187		0.045	body mass (VT:0001259)	body weight (CMO:0000012)	18	52539763	76104388	Rat
61429	Cia17	Collagen induced arthritis QTL 17	4.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	18	31359408	70263868	Rat
724542	Kidm2	Kidney mass QTL 2	2.6		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	18	59172115	83828827	Rat
61367	Iddm4	Insulin dependent diabetes mellitus QTL 4	2.33	0.0074	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	18	38192455	83192455	Rat
1359020	Ppulsi2	Prepulse inhibition QTL 2	2.71		prepulse inhibition trait (VT:0003088)	acoustic startle response measurement (CMO:0001519)	18	52292875	73997283	Rat
2312600	Bp341	Blood pressure QTL 341		0.05	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	59330409	70263868	Rat
9590318	Scort22	Serum corticosterone level QTL 22	7.64	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	18	29792965	74792965	Rat
1578661	Bss20	Bone structure and strength QTL 20	3.7		femur morphology trait (VT:0000559)	femoral neck cross-sectional area (CMO:0001697)	18	11791518	83218561	Rat
1331754	Bp230	Blood pressure QTL 230	4.61609		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	29792965	74792965	Rat

Markers in Region

BF389035

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	67,871,332 - 67,871,457 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	70,250,024 - 70,250,148	NCBI	Rnor6.0
Rnor_5.0	18	69,391,571 - 69,391,695	UniSTS	Rnor5.0
RGSC_v3.4	18	71,069,568 - 71,069,692	UniSTS	RGSC3.4
Celera	18	66,049,370 - 66,049,494	UniSTS
RH 3.4 Map	18	685.3	UniSTS
Cytogenetic Map	18	q12.2	UniSTS

RH135120

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	67,882,676 - 67,882,863 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	70,261,366 - 70,261,552	NCBI	Rnor6.0
Rnor_5.0	18	69,402,913 - 69,403,099	UniSTS	Rnor5.0
RGSC_v3.4	18	71,080,911 - 71,081,097	UniSTS	RGSC3.4
Celera	18	66,060,715 - 66,060,901	UniSTS
RH 3.4 Map	18	685.3	UniSTS
Cytogenetic Map	18	q12.2	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001011924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254909	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254910	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254911	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254913	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006254914	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008772105	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600882	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600883	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039096640	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277170	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277171	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277172	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_361462	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC081932	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000032202 ⟹ ENSRNOP00000037640

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	18	67,870,022 - 67,884,475 (+)	Ensembl
Rnor_6.0 Ensembl	18	70,248,713 - 70,263,164 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099489 ⟹ ENSRNOP00000097486

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	18	67,869,992 - 67,886,554 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000102132 ⟹ ENSRNOP00000078508

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	18	67,869,998 - 67,884,485 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000111311 ⟹ ENSRNOP00000086562

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	18	67,869,998 - 67,883,010 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000113558 ⟹ ENSRNOP00000097211

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	18	67,869,998 - 67,884,485 (+)	Ensembl

RefSeq Acc Id:

NM_001011924 ⟹ NP_001011924

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	70,145,252 - 70,159,728 (+)	NCBI
mRatBN7.2	18	67,870,022 - 67,884,500 (+)	NCBI
Rnor_6.0	18	70,248,713 - 70,263,189 (+)	NCBI
Rnor_5.0	18	69,390,120 - 69,404,741 (+)	NCBI
RGSC_v3.4	18	71,068,257 - 71,082,734 (+)	RGD
Celera	18	66,048,059 - 66,062,538 (+)	RGD

Sequence:

show sequence

CTACTGTTTTGGAAGAGGCTGCGGTGGAAGAGGAGGAAGAAGAAGAGTAGAACCGGCGGGTCGC
GCAAGCGGGATCCTTCCCATGGGTCCACCGGCCTAGAGCCGAGGAAGCTGCGAGCCTGGTGTCA
AGCTGGCTTCTGAAGCATCTATGGCTGAGGCCTGGCAGGACTGCCCAGCCCTGGGCCCTGGCTG
GAAACGCCGAGAGGCCTTTCGAAAGTCAGGGGCCTCGTGTGGACGCTCAGACATCTATTATCGG
AGCCCCACAGGAGAAAAGATCCGAAGCAAAATTGAGCTGACTCGATACCTGGGCCCTGCATGCG
ATCTTACCCTGTTTGACTTCAGACAAGGCATCTTATGCCACCCAGTTCCCAAGACCCATCCCTT
GGCTGTCCCCAGCAAGAAGAAAAAGAAGACTTCTAAACCAGCCAAGGCTAAGAAACAGCAGGTT
GGGCCACAGAGAAGTGAGGTCAGGAAAGAGACTCCACGGGAAGGAAATAAGGTCGCTCCTGCCA
CAGCTTTATTACCTGTGACTGCGTCTGCGCCTGCACCTGTGCCTGTGCCTGTGTCTGCACCTGC
GCCTGCACCTGCACCTTTGTGCTGTGAGAATTGTGGAATCCACCTGTCATGGGATGGTATCAAA
AGGGAGAGACGCAGGACATTGTGCAAAGACTGCCGAGCACAGAGAATTGCCTTCAACCGAGAAC
AGCGAATGTTTAAGCGAGTTGGCTGTGGGGAGTGCACAGCTTGCCTGGTGAAAGAAGACTGCGG
GGTGTGCTCCATCTGCTGCCTGCAGCTGCCCAACGATGTGGCCTCAGGGCTCTTCTGCAAGTGT
GAGCAGAGACGCTGCCTGCGGATTGTGGAGAAGGGTAAATATGATCATAGTAAGAGAGGCCCGA
GGGTAGCTTCTCGACGTCACTCCCGAGCCCCGCCACTTCCTCCACACGCTGCGTCACAGCATCC
AGAGCCCACAGAACTGCACATCAGCGACCAAACGCCCACAGCACCTGCTGAGTTCGTCTATGAC
TGTGTAGAGGAGGACGAGCTAAAGCGGCTGCTGCCCAGTATTGGGCCAGGGTCTGAGGAGGAAG
CAAGATTGCTTCCACATCATACCCACCAAAAGAGGTCTGCTTCTACTCGACAGCTGCAACTGAG
CTCTCCCTTAAAGGCTCCTTTGGCTGTGGTCACAACCCCACCGGGCCCTGTCCAAGATTCAGGG
AAGCGGCAAGCAGGTAGTGGCTTTGTACTGCCCCAACCTGACACAGACCTTGTGTATTTACAAG
AGGGTACCAGCAGTCTCATGCAGGTGCCTGGCCCTGCTGCAGCTTCCACAGAAAACCCAGCACA
GGAGACCCAGGGCTCTGCCCCAGGTTGGGTTGTGGCCTTGCCCCAGGTGAAGCAAGAGAAGGCG
GATGCCCCAGAGGAGTGGACAGCAGTCACAACCTTCCTGACTTCTTCCACGGTGCAGCCTGGCT
TCCTTAGCAAGGCGTCAGGCCTGGACCCTCCACCTGTGAAACGAGAGCCCCCTGGCCCTGAGGA
GGATGGAGAAGAGAACAAAGAAGATGATGTCTCTGAATCAGCTCCAGCAGAAGAGATAGGAGGG
ATTGGCACCCCAGTGATCACGGAGATTTTCAGCCTGGGTGGAACCCGCCTCCGGGATGCAGAAG
CCTGGTTGCCAAGGCTACATAAACTGTTAGCAGTAAATGAAAATGAGTATTTTACTGAGCTGCA
GTTGAAAGAAGAAATATTGTAGGAGAGAAAAGCAATTATTATTAAGAGAAGAAAGACATTCTTT
TGTGGCTGAAAAGCTGAACCTGGAATTCAGGAAATGGAATCTAAATCTAGAGATGTACCATGTA
GAAAATCTGAAGTGGGTGGGTTACAAATAATTAAGCACACTAATTTGAAGAAAACCATCCTTAA
ACATGTGTACACATGGATTGCACTTAGTATCTGTCAGTGACTGGCCTTATTACTGTCCTCCCCC
TTCCTCTTCTTGTTCCCCCATCCCTCTTAACAGGGGCACCACAGTAGCAGTCAGTTTGCTCTTA
AGCAGTGTAACTCCGTTTTATGGTTACTAGGAGCTACAACTCTGGTTTCCATGTATGCTGAAGA
CCGTCTAGTTTCCTGGACTGCATTGCCAGTTTTGCCTGGGATCCCGATTCTCAAGAATTGAGTA
TCTGAACTTCTGATCCGAAGCTCATTCCTCCAGTCAGACAACTGCCCTGCTAGTATTTCTGATC
TGCCCTCTTCCTGTGTTAGCCCAAAGTGTGGGCCCCATTTTCTGTTCAGTGCAGTAGGAAGATT
TTGTTCACAGATCTTACTGGTTGTGTAGCTCGACAAGGCACTTTGGCTTCCTGAGCCTTAGTTG
ACTTCACTGCAAACTAAAGCCAATACCCTCAGTTCCTTCAACCCTGTAAGAATTTTGTCAACCT
CAAAGGTTGTTTCTGGAAATACTTTGCAAATTGTAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006254909 ⟹ XP_006254971

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	70,145,117 - 70,159,744 (+)	NCBI
mRatBN7.2	18	67,869,877 - 67,884,501 (+)	NCBI
Rnor_6.0	18	70,248,571 - 70,263,190 (+)	NCBI
Rnor_5.0	18	69,390,120 - 69,404,741 (+)	NCBI

Sequence:

show sequence

CCGCAATACGCAGGCGCGGAGCCTCCCCATTGAGGGCACGCGTGACAAGGCTGCACACACAGGT
GCTGGTCCTAGTCGGAGCCCCAAAGGCAAGCATTGGGTTTCCGGTTCCGGGACTAACCAACCGC
CGCAGAGGCGACAACTACTGTTTTGGAAGAGGCTGCGGTGGAAGAGGAGGAAGAAGAAGAGTAG
AACCGGCGGGTCGCGCAAGCGGGATCCTTCCCATGGGTCCACCGGCCTAGAGCCGAGGAAGCTG
CGAGCCTGGTGTCAAGCTGGCTTCTGAAGCATCTATGGCTGAGGCCTGGCAGGACTGCCCAGCC
CTGGGCCCTGGCTGGAAACGCCGAGAGGCCTTTCGAAAGTCAGGGGCCTCGTGTGGACGCTCAG
ACATCTATTATCGGAGCCCCACAGGAGAAAAGATCCGAAGCAAAATTGAGCTGACTCGATACCT
GGGCCCTGCATGCGATCTTACCCTGTTTGACTTCAGACAAGGCATCTTATGCCACCCAGTTCCC
AAGACCCATCCCTTGGCTGTCCCCAGCAAGAAGAAAAAGAAGACTTCTAAACCAGCCAAGGCTA
AGAAACAGCAGGTTGGGCCACAGAGAAGTGAGGTCAGGAAAGAGACTCCACGGGAAGGAAATAA
GGTCGCTCCTGCCACAGCTTTATTACCTGTGACTGCGTCTGCGCCTGCACCTGTGCCTGTGCCT
GTGTCTGCACCTGCGCCTGCACCTGCACCTTTGTGCTGTGAGAATTGTGGAATCCACCTGTCAT
GGGATGGTATCAAAAGGGAGAGACGCAGGACATTGTGCAAAGACTGCCGAGCACAGAGAATTGC
CTTCAACCGAGAACAGCGAATGTTTAAGCGAGTTGGCTGTGGGGAGTGCACAGCTTGCCTGGTG
AAAGAAGACTGCGGGGTGTGCTCCATCTGCTGCCTGCAGCTGCCCAACGATGTGGCCTCAGGGC
TCTTCTGCAAGTGTGAGCAGAGACGCTGCCTGCGGATTGTGGAGAAGAACCGAGGGTGTGGTGT
GTGTCGGGGTTGTCAGACCCAAGAGGACTGTGGCCATTGCCGCATCTGCCTTCGCTTTCCCCGC
CCTGGTCTCAAGCGCCAGTGGAGGTGTTTGCAACGGCGCTGTTTTTGGGGTAAATATGATCATA
GTAAGAGAGGCCCGAGGGTAGCTTCTCGACGTCACTCCCGAGCCCCGCCACTTCCTCCACACGC
TGCGTCACAGCATCCAGAGCCCACAGAACTGCACATCAGCGACCAAACGCCCACAGCACCTGCT
GAGTTCGTCTATGACTGTGTAGAGGAGGACGAGCTACAGCCCTATACGAACCAGCGGCAGAACC
GCAAGTGTGGGGCCTGTGCAGCCTGCCTACGGCGGATGGACTGTGGCCACTGCGACTTCTGCTG
TGACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCAGTGCCTG
CAGTTTGCCATGAAGCGGCTGCTGCCCAGTATTGGGCCAGGGTCTGAGGAGGAAGCAAGATTGC
TTCCACATCATACCCACCAAAAGAGGTCTGCTTCTACTCGACAGCTGCAACTGAGCTCTCCCTT
AAAGGCTCCTTTGGCTGTGGTCACAACCCCACCGGGCCCTGTCCAAGATTCAGGGAAGCGGCAA
GCAGGTAGTGGCTTTGTACTGCCCCAACCTGACACAGACCTTGTGTATTTACAAGAGGGTACCA
GCAGTCTCATGCAGGTGCCTGGCCCTGCTGCAGCTTCCACAGAAAACCCAGCACAGGAGACCCA
GGGCTCTGCCCCAGGTTGGGTTGTGGCCTTGCCCCAGGTGAAGCAAGAGAAGGCGGATGCCCCA
GAGGAGTGGACAGCAGTCACAACCTTCCTGACTTCTTCCACGGTGCAGCCTGGCTTCCTTAGCA
AGGCGTCAGGCCTGGACCCTCCACCTGTGAAACGAGAGCCCCCTGGCCCTGAGGAGGATGGAGA
AGAGAACAAAGAAGATGATGTCTCTGAATCAGCTCCAGCAGAAGAGATAGGAGGGATTGGCACC
CCAGTGATCACGGAGATTTTCAGCCTGGGTGGAACCCGCCTCCGGGATGCAGAAGCCTGGTTGC
CAAGGCTACATAAACTGTTAGCAGTAAATGAAAATGAGTATTTTACTGAGCTGCAGTTGAAAGA
AGAAATATTGTAGGAGAGAAAAGCAATTATTATTAAGAGAAGAAAGACATTCTTTTGTGGCTGA
AAAGCTGAACCTGGAATTCAGGAAATGGAATCTAAATCTAGAGATGTACCATGTAGAAAATCTG
AAGTGGGTGGGTTACAAATAATTAAGCACACTAATTTGAAGAAAACCATCCTTAAACATGTGTA
CACATGGATTGCACTTAGTATCTGTCAGTGACTGGCCTTATTACTGTCCTCCCCCTTCCTCTTC
TTGTTCCCCCATCCCTCTTAACAGGGGCACCACAGTAGCAGTCAGTTTGCTCTTAAGCAGTGTA
ACTCCGTTTTATGGTTACTAGGAGCTACAACTCTGGTTTCCATGTATGCTGAAGACCGTCTAGT
TTCCTGGACTGCATTGCCAGTTTTGCCTGGGATCCCGATTCTCAAGAATTGAGTATCTGAACTT
CTGATCCGAAGCTCATTCCTCCAGTCAGACAACTGCCCTGCTAGTATTTCTGATCTGCCCTCTT
CCTGTGTTAGCCCAAAGTGTGGGCCCCATTTTCTGTTCAGTGCAGTAGGAAGATTTTGTTCACA
GATCTTACTGGTTGTGTAGCTCGACAAGGCACTTTGGCTTCCTGAGCCTTAGTTGACTTCACTG
CAAACTAAAGCCAATACCCTCAGTTCCTTCAACCCTGTAAGAATTTTGTCAACCTCAAAGGTTG
TTTCTGGAAATACTTTGCAAATTGTAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006254910 ⟹ XP_006254972

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	70,145,119 - 70,159,744 (+)	NCBI
mRatBN7.2	18	67,869,876 - 67,884,501 (+)	NCBI
Rnor_6.0	18	70,248,570 - 70,263,190 (+)	NCBI
Rnor_5.0	18	69,390,120 - 69,404,741 (+)	NCBI

Sequence:

show sequence

ACCGCAATACGCAGGCGCGGAGCCTCCCCATTGAGGGCACGCGTGACAAGGCTGCACACACAGG
TGCTGGTCCTAGTCGGAGCCCCAAAGGCAAGCATTGGGTTTCCGGTTCCGGGACTAACCAACCG
CCGCAGAGGCGACAACTACTGTTTTGGAAGAGGCTGCGGTGGAAGAGGAGGAAGAAGAAGAGTA
GAACCGGCGGGTCGCGCAAGCGGGATCCTTCCCATGGGTCCACCGGCCTAGAGCCGAGGAAGCT
GCGAGCCTGGTGTCAAGCTGGCTTCTGAAGCATCTATGGCTGAGGCCTGGCAGGACTGCCCAGC
CCTGGGCCCTGGCTGGAAACGCCGAGAGGCCTTTCGAAAGTCAGGGGCCTCGTGTGGACGCTCA
GACATCTATTATCGGAGCCCCACAGGAGAAAAGATCCGAAGCAAAATTGAGCTGACTCGATACC
TGGGCCCTGCATGCGATCTTACCCTGTTTGACTTCAGACAAGGCATCTTATGCCACCCAGTTCC
CAAGACCCATCCCTTGGCTGTCCCCAGCAAGAAGAAAAAGAAGACTTCTAAACCAGCCAAGGCT
AAGAAACAGCAGGTTGGGCCACAGAGAAGTGAGGTCAGGAAAGAGACTCCACGGGAAGGAAATA
AGGTCGCTCCTGCCACAGCTTTATTACCTGTGACTGCGTCTGCGCCTGCACCTGTGCCTGTGCC
TGTGTCTGCACCTGCGCCTGCACCTGCACCTTTGTGCTGTGAGAATTGTGGAATCCACCTGTCA
TGGGATGGTATCAAAAGGGAGAGACGCAGGACATTGTGCAAAGACTGCCGAGCACAGAGAATTG
CCTTCAACCGAGAACAGCGAATGTTTAAGCGAGTTGGCTGTGGGGAGTGCACAGCTTGCCTGGT
GAAAGAAGACTGCGGGGTGTGCTCCATCTGCTGCCTGCAGCTGCCCAACGATGTGGCCTCAGGG
CTCTTCTGCAAGTGTGAGCAGAGACGCTGCCTGCGGATTGTGGAGAAGAACCGAGGGTGTGGTG
TGTGTCGGGGTTGTCAGACCCAAGAGGACTGTGGCCATTGCCGCATCTGCCTTCGCTTTCCCCG
CCCTGGTCTCAAGCGCCAGTGGAGGTGTTTGCAACGGCGCTGTTTTTGGGGTAAATATGATCAT
AGTAAGAGAGGCCCGAGGGTAGCTTCTCGACGTCACTCCCGAGCCCCGCCACTTCCTCCACACG
CTGCGTCACAGCATCCAGAGCCCACAGAACTGCACATCAGCGACCAAACGCCCACAGCACCTGC
TGAGTTCGTCTATGACTGTGTAGAGGAGGACGAGCTACCCTATACGAACCAGCGGCAGAACCGC
AAGTGTGGGGCCTGTGCAGCCTGCCTACGGCGGATGGACTGTGGCCACTGCGACTTCTGCTGTG
ACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCAGTGCCTGCA
GTTTGCCATGAAGCGGCTGCTGCCCAGTATTGGGCCAGGGTCTGAGGAGGAAGCAAGATTGCTT
CCACATCATACCCACCAAAAGAGGTCTGCTTCTACTCGACAGCTGCAACTGAGCTCTCCCTTAA
AGGCTCCTTTGGCTGTGGTCACAACCCCACCGGGCCCTGTCCAAGATTCAGGGAAGCGGCAAGC
AGGTAGTGGCTTTGTACTGCCCCAACCTGACACAGACCTTGTGTATTTACAAGAGGGTACCAGC
AGTCTCATGCAGGTGCCTGGCCCTGCTGCAGCTTCCACAGAAAACCCAGCACAGGAGACCCAGG
GCTCTGCCCCAGGTTGGGTTGTGGCCTTGCCCCAGGTGAAGCAAGAGAAGGCGGATGCCCCAGA
GGAGTGGACAGCAGTCACAACCTTCCTGACTTCTTCCACGGTGCAGCCTGGCTTCCTTAGCAAG
GCGTCAGGCCTGGACCCTCCACCTGTGAAACGAGAGCCCCCTGGCCCTGAGGAGGATGGAGAAG
AGAACAAAGAAGATGATGTCTCTGAATCAGCTCCAGCAGAAGAGATAGGAGGGATTGGCACCCC
AGTGATCACGGAGATTTTCAGCCTGGGTGGAACCCGCCTCCGGGATGCAGAAGCCTGGTTGCCA
AGGCTACATAAACTGTTAGCAGTAAATGAAAATGAGTATTTTACTGAGCTGCAGTTGAAAGAAG
AAATATTGTAGGAGAGAAAAGCAATTATTATTAAGAGAAGAAAGACATTCTTTTGTGGCTGAAA
AGCTGAACCTGGAATTCAGGAAATGGAATCTAAATCTAGAGATGTACCATGTAGAAAATCTGAA
GTGGGTGGGTTACAAATAATTAAGCACACTAATTTGAAGAAAACCATCCTTAAACATGTGTACA
CATGGATTGCACTTAGTATCTGTCAGTGACTGGCCTTATTACTGTCCTCCCCCTTCCTCTTCTT
GTTCCCCCATCCCTCTTAACAGGGGCACCACAGTAGCAGTCAGTTTGCTCTTAAGCAGTGTAAC
TCCGTTTTATGGTTACTAGGAGCTACAACTCTGGTTTCCATGTATGCTGAAGACCGTCTAGTTT
CCTGGACTGCATTGCCAGTTTTGCCTGGGATCCCGATTCTCAAGAATTGAGTATCTGAACTTCT
GATCCGAAGCTCATTCCTCCAGTCAGACAACTGCCCTGCTAGTATTTCTGATCTGCCCTCTTCC
TGTGTTAGCCCAAAGTGTGGGCCCCATTTTCTGTTCAGTGCAGTAGGAAGATTTTGTTCACAGA
TCTTACTGGTTGTGTAGCTCGACAAGGCACTTTGGCTTCCTGAGCCTTAGTTGACTTCACTGCA
AACTAAAGCCAATACCCTCAGTTCCTTCAACCCTGTAAGAATTTTGTCAACCTCAAAGGTTGTT
TCTGGAAATACTTTGCAAATTGTAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006254911 ⟹ XP_006254973

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	70,145,093 - 70,159,744 (+)	NCBI
mRatBN7.2	18	67,869,877 - 67,884,501 (+)	NCBI
Rnor_6.0	18	70,248,571 - 70,263,190 (+)	NCBI
Rnor_5.0	18	69,390,120 - 69,404,741 (+)	NCBI

Sequence:

show sequence

CCGCAATACGCAGGCGCGGAGCCTCCCCATTGAGGGCACGCGTGACAAGGCTGCACACACAGGT
GCTGGTCCTAGTCGGAGCCCCAAAGGCAAGCATTGGGTTTCCGGTTCCGGGACTAACCAACCGC
CGCAGAGGCGACAACTACTGTTTTGGAAGAGGCTGCGGTGGAAGAGGAGGAAGAAGAAGAGTAG
AACCGGCGGGTCGCGCAAGCGGGATCCTTCCCATGGGTCCACCGGCCTAGAGCCGAGGAAGCTG
CGAGCCTGGTGTCAAGCTGGCTTCTGAAGCATCTATGGCTGAGGCCTGGCAGGACTGCCCAGCC
CTGGGCCCTGGCTGGAAACGCCGAGAGGCCTTTCGAAAGTCAGGGGCCTCGTGTGGACGCTCAG
ACATCTATTATCGGAGCCCCACAGGAGAAAAGATCCGAAGCAAAATTGAGCTGACTCGATACCT
GGGCCCTGCATGCGATCTTACCCTGTTTGACTTCAGACAAGGCATCTTATGCCACCCAGTTCCC
AAGACCCATCCCTTGGCTGTCCCCAGCAAGAAGAAAAAGAAGACTTCTAAACCAGCCAAGGCTA
AGAAACAGCAGGTTGGGCCACAGAGAAGTGAGGTCAGGAAAGAGACTCCACGGGAAGGAAATAA
GGTCGCTCCTGCCACAGCTTTATTACCTGTGACTGCGTCTGCGCCTGCACCTGTGCCTGTGCCT
GTGTCTGCACCTGCGCCTGCACCTGCACCTTTGTGCTGTGAGAATTGTGGAATCCACCTGTCAT
GGGATGGTATCAAAAGGGAGAGACGCAGGACATTGTGCAAAGACTGCCGAGCACAGAGAATTGC
CTTCAACCGAGAACAGCGAATGTTTAAGCGAGTTGGCTGTGGGGAGTGCACAGCTTGCCTGGTG
AAAGAAGACTGCGGGGTGTGCTCCATCTGCTGCCTGCAGCTGCCCAACGATGTGGCCTCAGGGC
TCTTCTGCAAGTGTGAGCAGAGACGCTGCCTGCGGATTGTGGAGAAGAACCGAGGGTGTGGTGT
GTGTCGGGGTTGTCAGACCCAAGAGGACTGTGGCCATTGCCGCATCTGCCTTCGCTTTCCCCGC
CCTGGTCTCAAGCGCCAGTGGAGGTGTTTGCAACGGCGCTGTTTTTGGGGTAAATATGATCATA
GTAAGAGAGGCCCGAGGGTAGCTTCTCGACGTCACTCCCGAGCCCCGCCACTTCCTCCACACGC
TGCGTCACAGCATCCAGAGCCCACAGAACTGCACATCAGCGACCAAACGCCCACAGCACCTGCT
GAGTTCGTCTATGACTGTGTAGAGGAGGACGAGCTACAGCCCTATACGAACCAGCGGCAGAACC
GCAAGTGTGGGGCCTGTGCAGCCTGCCTACGGCGGATGGACTGTGGCCACTGCGACTTCTGCTG
TGACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCAGTGCCTG
CAGTTTGCCATGAAGCGGCTGCTGCCCAGTATTGGGCCAGGGTCTGAGGAGGAAGCAAGATTGC
TTCCACATCATACCCACCAAAAGAGGTCTGCTTCTACTCGACAGCTGCAACTGAGCTCTCCCTT
AAAGGCTCCTTTGGCTGTGGTCACAACCCCACCGGGCCCTGTCCAAGATTCAGGGAAGCGGCAA
GCAGGTAGTGGCTTTGTACTGCCCCAACCTGACACAGACCTTGTGTATTTACAAGAGGGTACCA
GCAGTCTCATGCAGGTGCCTGGCCCTGCTGCAGCTTCCACAGAAAACCCAGCACAGGAGACCCA
GGGCTCTGCCCCAGGTTGGGTTGTGGCCTTGCCCCAGGTGAAGCAAGAGAAGGCGGATGCCCCA
GAGGAGTGGACAGCAGTCACAACCTTCCTGACTTCTTCCACGGTGCAGCCTGGCTTCCTTAGCA
AGGCGTCAGGCCTGGACCCTCCACCTGTGAAACGAGAGCCCCCTGGCCCTGAGGAGGATGGAGA
AGAGAACAAAGAAGATGATGTCTCTGAATCAGCTCCAGCAGAAGAGATAGGAGGGATTGGCACC
CCAGTGATCACGGAGATTTTCAGCCTGGGTGGAACCCGCCTCCGGGATGCAGAAGCCTGGTTGC
CAAGGTCCAAGGACCTTAAAAAACCCGGAGCTAAAATGCAGTAGACTGGAGGCCTCTGCTGACT
GTAGGCTGAAGGTGGTATTTGCAGACCGGCTTTGTGGAAACAACCCTGATCCTAAAGGGGCTGG
GCCCTGGCCCGGCTGCAGAGCTTGTGTGGGAACCAACTCTAGGAGGAAAACCTACAAGCACAAC
CAAGGAGCAGGCCTGCTCAGTCCTTGGACCTTAGAGGAAGCAAGCTGGAGAGGAAGAGAAAGAG
TAGAAGGCTGGTGGAATGTCTGCTCCTCCGTGGATCTCGATGCAGTGAGAAGTTGGATGGTAGG
GTAGGGAAGGGTAGCTGAAGCCACTGCAGACAGCTCACACAAGCCACCTGCATAGCGTCCGTTG
GTGGCTTCTGGATGACCTGGCAGTGTGTCTGAACATTTTCTCAGGGAAACAGCAGTTGCAATGC
TATGTGAATAAAGGGAGAAAGGAGTTGTTGTTTGCTGAGCTCCTGTGGAGCCAAGCGACTCTAG
CCCTCACAGTAGTCCTTAGGAACACACTGACGTTACGCACTTTTGCAGGCAGGAAATAGATTCA
GAAGAGACGAACTTTCCCGGTGTTACACAGCTAGTGTTGCTACATTCTAGAAACATGCCTAGGC
TATAAAAGCTTTGTTCTTTAAGCCACTAAATTGTTAACTGCAGTCTTCTGTGCAATAATGTACG
TTACAATAACAGTTTCAGTGACTTTGAAACAGCAGTGGGGCACTCTGAGCACTGTAAGATACCC
GTTCCACTTGGCCTCTGTGGTCTAGGAGATGCCCAGGCTGTGGGTGAACGGGTCACCTTCTCGT
TAGGCCCTGGATGCTGCATCCGTTCCCTTTGTTCTGAGTGTGCTCCCCACCGCTGGCCCACAGT
TTGCTATGCCCAGACGCTCTCACTTCAGGCAGAGCAGTGCATGGCACTAAAGCTGTCAGCCTGA
CCCCTCTTTTCCTGACAGCTTCTCTCTGATGACCTCTGTGCTTGTTTCCTGCCCCCAGCCCAAA
CGTTTGTTAGAAGACTGAGTGGATTTATGCACTGAGTCCTGCCCAGAGACCAGTCTCGACTCAG
CCGTACCTCATTTTCCATCCTTAAATGCCAAAAAGTGTGAAGTTTGTTACTTAGCCAGCTTTAC
GGGCGAGGACTGGGCACCTCGTCATATGTGTGTTCTGTGCACCCCGTGTGTTAGCTTTGTCCCA
GCTCTGCTGCTTTAGTAATGCAGATATGGGTCACTCTGTTTCCAGTCCACAAGACAGAGGTCTG
CCACCTTGTTTTCTGCCTTTGCCCTGCTTTGCTAGTTGTGTACTGGATCATTCTGCTCTTCAAC
CCTAGAGCTCACCACTTGTCCCTAGTATCCTGGTAGTTCGGACAGTGGTGTATTAACTTGTCTT
TGGTTGGCATTTGACTTGTGAATGAAGATTCTGATTACTATATGTGTTTGACTAGGGGACAATC
AAAAGATCAGAACCACTACAACAAAGGCTGATGTGTGCATGTTAAGGATGTTTTATGTTATGTA
ATTTGCGGAGATGGCTTAGCCTCTAGGGCTGTCATTTGTATATAATACTAGGACTTAAAGTATT
CAGGACGGGGAGTCAGGAAGGGAAGGTGGAAGGACATGGAAACCTTGAACAAGAGTTGGAATTC
AAGAAGATGGCCTGGAACCCGTGCAGTGTCTCACCGCCTCCAGCTTCAATGATGTTTGTATCCT
GCAGAAGAAGCTAGTGTCCTTAGGAGCATCTGGCCTAGGACTAGAGAAGCTAAAGGAAGACCCA
GGGAAATTGTAGCCGCTGAAGGCCTGGCTGTAGGACTTGCTGTTTCCCCGTACCAAGGTGAGAC
AGCAGACTAATGACAGCTTGTATGAACTGCAACATGCTTGCTGTCCCTGCACCAACCTTCCAAG
TGTTAAGAACAGCCTGCTGCTGCTGCTTCACTTCTACTAGCCACAGCCTTTCTGTGGATGTTCT
TAACTGGAATGTATGGGGAAGGATCCCAGGAAGCATAGTCTAGTCAAGGTGACATGTTAGAAAG
CCACCTTACCATGACTCAGCTCCATGAGGTCTCACCACTCACCTGAGGATAACGTAACAAAACT
ACATTGCTGAAAAGGTAAAGCTGGAGACCATGGATTTCGTGATGGTCCCAGCAAGTAAAGAAAT
CATGTCCCGCTGATCCAGAACAGTCTTGCTGATCTCAGCTGTATTTGTGTTATTCATCCAAGTC
TTGAAAGCTTAGCTCACTGTACATAATACTGAGATTCAGAAGTGCAGTTTTATAAAATGCATCA
ATATATATTACAAGTGATAAAATAGCTCCGGTTTACTATGGACTTCGATGCTGAAATATAGAAT
TGAGTATACTGTGGAGAAGCCAGTCCTTTTTTGAGTTTTTTTTTCAAAGTAGTATAGTAGTTGG
AAACAACTTAATCATTTCTATTTCTAAGGTGTTCTATTGTAAAGTTATTTTAAAACAAATTCTC
CTGTTCTATTACTTGTTTTTTCTGTTAGTGTTTCTTTGTGGGGATGTTTGGTGGTGGTAACAGT
GTTGACTGCTGTGGGAAATTGGGATAGTGGGTGTCAGGATTATGGTCAGTTGTGTTATTTCCCC
TGGCTTCCGTGGGGTGGCTGCAGGCTGAGGCCTGACTGCACTTGTTGCTCATCCCACCATGCAG
CCAGTCAGGCTCCTCCGGGCCTAGGCTGCTTGAGAATGCCATTGGGTAGCTTTTAAAGCTGGTG
CCAGCTGCCGTGGGGCAGAGCCTCTGCCTGCAAAGCCCCTTGATGTTTGGAAAAGCTGGTTTTA
CTCTTGAGAGAGTGGTGAAACGGTCTAAACGAGAGCTAGTGTGGCCAGGCTCATGGGCTAACTG
CTCTTCTGTGTGAGCTCAAGATGGTCCTATGATGTCTGCAAGCACTGGCTGCCTCTAAGGGTCA
GCTTCCCTGGGCCTTCCCAGACTCACCAACAAGACCTCTGTGGCGACCCAAACCCTGGTCTCTG
GGGTTCACAAACCCTGCTGAAGGGATCTGTTCCCTCTGTAGAGGGTGTGCTGGGGGTGAGGGGG
ACACCCACCTGAAGGCCACCACTGAGCACTCAGTTGAGGGAGCTGCCTCTGGACATGGTCTGGA
AACCCAGACAGCCTCTTAATTTTTTTTCTTTTTTTGTTTCAGGCTACATAAACTGTTAGCAGTA
AATGAAAATGAGTATTTTACTGAGCTGCAGTTGAAAGAAGAAATATTGTAGGAGAGAAAAGCAA
TTATTATTAAGAGAAGAAAGACATTCTTTTGTGGCTGAAAAGCTGAACCTGGAATTCAGGAAAT
GGAATCTAAATCTAGAGATGTACCATGTAGAAAATCTGAAGTGGGTGGGTTACAAATAATTAAG
CACACTAATTTGAAGAAAACCATCCTTAAACATGTGTACACATGGATTGCACTTAGTATCTGTC
AGTGACTGGCCTTATTACTGTCCTCCCCCTTCCTCTTCTTGTTCCCCCATCCCTCTTAACAGGG
GCACCACAGTAGCAGTCAGTTTGCTCTTAAGCAGTGTAACTCCGTTTTATGGTTACTAGGAGCT
ACAACTCTGGTTTCCATGTATGCTGAAGACCGTCTAGTTTCCTGGACTGCATTGCCAGTTTTGC
CTGGGATCCCGATTCTCAAGAATTGAGTATCTGAACTTCTGATCCGAAGCTCATTCCTCCAGTC
AGACAACTGCCCTGCTAGTATTTCTGATCTGCCCTCTTCCTGTGTTAGCCCAAAGTGTGGGCCC
CATTTTCTGTTCAGTGCAGTAGGAAGATTTTGTTCACAGATCTTACTGGTTGTGTAGCTCGACA
AGGCACTTTGGCTTCCTGAGCCTTAGTTGACTTCACTGCAAACTAAAGCCAATACCCTCAGTTC
CTTCAACCCTGTAAGAATTTTGTCAACCTCAAAGGTTGTTTCTGGAAATACTTTGCAAATTGTA
AAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006254913 ⟹ XP_006254975

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	70,145,093 - 70,159,744 (+)	NCBI
mRatBN7.2	18	67,869,879 - 67,884,501 (+)	NCBI
Rnor_6.0	18	70,248,572 - 70,263,190 (+)	NCBI
Rnor_5.0	18	69,390,120 - 69,404,741 (+)	NCBI

Sequence:

show sequence

CGCAATACGCAGGCGCGGAGCCTCCCCATTGAGGGCACGCGTGACAAGGCTGCACACACAGGTG
CTGGTCCTAGTCGGAGCCCCAAAGGCAAGCATTGGGTTTCCGGTTCCGGGACTAACCAACCGCC
GCAGAGGCGACAACTACTGTTTTGGAAGAGGCTGCGGTGGAAGAGGAGGAAGAAGAAGAGTAGA
ACCGGCGGGTCGCGCAAGCGGGATCCTTCCCATGGGTCCACCGGCCTAGAGCCGAGGAAGCTGC
GAGCCTGGTGTCAAGCTGGCTTCTGAAGCATCTATGGCTGAGGCCTGGCAGGACTGCCCAGCCC
TGGGCCCTGGCTGGAAACGCCGAGAGGCCTTTCGAAAGTCAGGGGCCTCGTGTGGACGCTCAGA
CATCTATTATCGGAGCCCCACAGGAGAAAAGATCCGAAGCAAAATTGAGCTGACTCGATACCTG
GGCCCTGCATGCGATCTTACCCTGTTTGACTTCAGACAAGGCATCTTATGCCACCCAGTTCCCA
AGACCCATCCCTTGGCTGTCCCCAGCAAGAAGAAAAAGAAGACTTCTAAACCAGCCAAGGCTAA
GAAACAGCAGGTTGGGCCACAGAGAAGTGAGGTCAGGAAAGAGACTCCACGGGAAGGAAATAAG
GTCGCTCCTGCCACAGCTTTATTACCTGTGACTGCGTCTGCGCCTGCACCTGTGCCTGTGCCTG
TGTCTGCACCTGCGCCTGCACCTGCACCTTTGTGCTGTGAGAATTGTGGAATCCACCTGTCATG
GGATGGTATCAAAAGGGAGAGACGCAGGACATTGTGCAAAGACTGCCGAGCACAGAGAATTGCC
TTCAACCGAGAACAGCGAATGTTTAAGCGAGTTGGCTGTGGGGAGTGCACAGCTTGCCTGGTGA
AAGAAGACTGCGGGGTGTGCTCCATCTGCTGCCTGCAGCTGCCCAACGATGTGGCCTCAGGGCT
CTTCTGCAAGTGTGAGCAGAGACGCTGCCTGCGGATTGTGGAGAAGAACCGAGGGTGTGGTGTG
TGTCGGGGTTGTCAGACCCAAGAGGACTGTGGCCATTGCCGCATCTGCCTTCGCTTTCCCCGCC
CTGGTCTCAAGCGCCAGTGGAGGTGTTTGCAACGGCGCTGTTTTTGGGGTAAATATGATCATAG
TAAGAGAGGCCCGAGGGTAGCTTCTCGACGTCACTCCCGAGCCCCGCCACTTCCTCCACACGCT
GCGTCACAGCATCCAGAGCCCACAGAACTGCACATCAGCGACCAAACGCCCACAGCACCTGCTG
AGTTCGTCTATGACTGTGTAGAGGAGGACGAGCTAAAGCGGCTGCTGCCCAGTATTGGGCCAGG
GTCTGAGGAGGAAGCAAGATTGCTTCCACATCATACCCACCAAAAGAGGTCTGCTTCTACTCGA
CAGCTGCAACTGAGCTCTCCCTTAAAGGCTCCTTTGGCTGTGGTCACAACCCCACCGGGCCCTG
TCCAAGATTCAGGGAAGCGGCAAGCAGGTAGTGGCTTTGTACTGCCCCAACCTGACACAGACCT
TGTGTATTTACAAGAGGGTACCAGCAGTCTCATGCAGGTGCCTGGCCCTGCTGCAGCTTCCACA
GAAAACCCAGCACAGGAGACCCAGGGCTCTGCCCCAGGTTGGGTTGTGGCCTTGCCCCAGGTGA
AGCAAGAGAAGGCGGATGCCCCAGAGGAGTGGACAGCAGTCACAACCTTCCTGACTTCTTCCAC
GGTGCAGCCTGGCTTCCTTAGCAAGGCGTCAGGCCTGGACCCTCCACCTGTGAAACGAGAGCCC
CCTGGCCCTGAGGAGGATGGAGAAGAGAACAAAGAAGATGATGTCTCTGAATCAGCTCCAGCAG
AAGAGATAGGAGGGATTGGCACCCCAGTGATCACGGAGATTTTCAGCCTGGGTGGAACCCGCCT
CCGGGATGCAGAAGCCTGGTTGCCAAGGCTACATAAACTGTTAGCAGTAAATGAAAATGAGTAT
TTTACTGAGCTGCAGTTGAAAGAAGAAATATTGTAGGAGAGAAAAGCAATTATTATTAAGAGAA
GAAAGACATTCTTTTGTGGCTGAAAAGCTGAACCTGGAATTCAGGAAATGGAATCTAAATCTAG
AGATGTACCATGTAGAAAATCTGAAGTGGGTGGGTTACAAATAATTAAGCACACTAATTTGAAG
AAAACCATCCTTAAACATGTGTACACATGGATTGCACTTAGTATCTGTCAGTGACTGGCCTTAT
TACTGTCCTCCCCCTTCCTCTTCTTGTTCCCCCATCCCTCTTAACAGGGGCACCACAGTAGCAG
TCAGTTTGCTCTTAAGCAGTGTAACTCCGTTTTATGGTTACTAGGAGCTACAACTCTGGTTTCC
ATGTATGCTGAAGACCGTCTAGTTTCCTGGACTGCATTGCCAGTTTTGCCTGGGATCCCGATTC
TCAAGAATTGAGTATCTGAACTTCTGATCCGAAGCTCATTCCTCCAGTCAGACAACTGCCCTGC
TAGTATTTCTGATCTGCCCTCTTCCTGTGTTAGCCCAAAGTGTGGGCCCCATTTTCTGTTCAGT
GCAGTAGGAAGATTTTGTTCACAGATCTTACTGGTTGTGTAGCTCGACAAGGCACTTTGGCTTC
CTGAGCCTTAGTTGACTTCACTGCAAACTAAAGCCAATACCCTCAGTTCCTTCAACCCTGTAAG
AATTTTGTCAACCTCAAAGGTTGTTTCTGGAAATACTTTGCAAATTGTAAAAAAAAAAAAAAAA
AAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006254914 ⟹ XP_006254976

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	70,145,119 - 70,159,744 (+)	NCBI
mRatBN7.2	18	67,869,879 - 67,884,501 (+)	NCBI
Rnor_6.0	18	70,248,572 - 70,263,190 (+)	NCBI
Rnor_5.0	18	69,390,120 - 69,404,741 (+)	NCBI

Sequence:

show sequence

CGCAATACGCAGGCGCGGAGCCTCCCCATTGAGGGCACGCGTGACAAGGCTGCACACACAGGTG
CTGGTCCTAGTCGGAGCCCCAAAGGCAAGCATTGGGTTTCCGGTTCCGGGACTAACCAACCGCC
GCAGAGGCGACAACTACTGTTTTGGAAGAGGCTGCGGTGGAAGAGGAGGAAGAAGAAGAGTAGA
ACCGGCGGGTCGCGCAAGCGGGATCCTTCCCATGGGTCCACCGGCCTAGAGCCGAGGAAGCTGC
GAGCCTGGTGTCAAGCTGGCTTCTGAAGCATCTATGGCTGAGGCCTGGCAGGACTGCCCAGCCC
TGGGCCCTGGCTGGAAACGCCGAGAGGCCTTTCGAAAGTCAGGGGCCTCGTGTGGACGCTCAGA
CATCTATTATCGGAGCCCCACAGGAGAAAAGATCCGAAGCAAAATTGAGCTGACTCGATACCTG
GGCCCTGCATGCGATCTTACCCTGTTTGACTTCAGACAAGGCATCTTATGCCACCCAGTTCCCA
AGACCCATCCCTTGGCTGTCCCCAGCAAGAAGAAAAAGAAGACTTCTAAACCAGCCAAGGCTAA
GAAACAGCAGGTTGGGCCACAGAGAAGTGAGGTCAGGAAAGAGACTCCACGGGAAGGAAATAAG
GTCGCTCCTGCCACAGCTTTATTACCTGTGACTGCGTCTGCGCCTGCACCTGTGCCTGTGCCTG
TGTCTGCACCTGCGCCTGCACCTGCACCTTTGTGCTGTGAGAATTGTGGAATCCACCTGTCATG
GGATGGTATCAAAAGGGAGAGACGCAGGACATTGTGCAAAGACTGCCGAGCACAGAGAATTGCC
TTCAACCGAGAACAGCGAATGTTTAAGCGAGTTGGCTGTGGGGAGTGCACAGCTTGCCTGGTGA
AAGAAGACTGCGGGGTGTGCTCCATCTGCTGCCTGCAGCTGCCCAACGATGTGGCCTCAGGGCT
CTTCTGCAAGTGTGAGCAGAGACGCTGCCTGCGGATTGTGGAGAAGAACCGAGGGTGTGGTGTG
TGTCGGGGTTGTCAGACCCAAGAGGACTGTGGCCATTGCCGCATCTGCCTTCGCTTTCCCCGCC
CTGGTCTCAAGCGCCAGTGGAGGTGTTTGCAACGGCGCTGTTTTTGGGGTAAATATGATCATAG
TAAGAGAGGCCCGAGGGTAGCTTCTCGACGTCACTCCCGAGCCCCGCCACTTCCTCCACACGCT
GCGTCACAGCATCCAGAGCCCACAGAACTGCACATCAGCGACCAAACGCCCACAGCACCTGCTG
AGTTCGTCTATGACTGTGTAGAGGAGGACGAGCTAAAGCGGCTGCTGCCCAGTATTGGGCCAGG
GTCTGAGGAGGAAGCAAGATTGCTTCCACATCATACCCACCAAAAGAGGTCTGCTTCTACTCGA
CAGCTGCAACTGAGCTCTCCCTTAAAGGCTCCTTTGGCTGTGGTCACAACCCCACCGGGCCCTG
TCCAAGATTCAGGGAAGCGGCAAGCAGGTAGTGGCTTTGTACTGCCCCAACCTGACACAGACCT
TGTGTATTTACAAGAGGGTACCAGCAGTCTCATGCAGGTGCCTGGCCCTGCTGCAGCTTCCACA
GAAAACCCAGCACAGGAGACCCAGGGCTCTGCCCCAGGTTGGGTTGTGGCCTTGCCCCAGGTGA
AGCAAGAGAAGGCGGATGCCCCAGAGGAGTGGACAGCAGTCACAACCTTCCTGACTTCTTCCAC
GGTGCAGCCTGGCTTCCTTAGCAAGGCGTCAGGCCTGGACCCTCCACCTGTGAAACGAGAGCCC
CCTGGCCCTGAGGAGGATGGAGAAGAGAACAAAGAAGATGATGTCTCTGAATCAGCTCCAGCAG
AAGAGATAGGAGGGATTGGCACCCCAGTGATCACGGAGATTTTCAGCCTGGGTGGAACCCGCCT
CCGGGATGCAGAAGCCTGGTTGCCAAGGTCCAAGGACCTTAAAAAACCCGGAGCTAAAATGCAG
TAGACTGGAGGCCTCTGCTGACTGTAGGCTGAAGGTGGTATTTGCAGACCGGCTTTGTGGAAAC
AACCCTGATCCTAAAGGGGCTGGGCCCTGGCCCGGCTGCAGAGCTTGTGTGGGAACCAACTCTA
GGAGGAAAACCTACAAGCACAACCAAGGAGCAGGCCTGCTCAGTCCTTGGACCTTAGAGGAAGC
AAGCTGGAGAGGAAGAGAAAGAGTAGAAGGCTGGTGGAATGTCTGCTCCTCCGTGGATCTCGAT
GCAGTGAGAAGTTGGATGGTAGGGTAGGGAAGGGTAGCTGAAGCCACTGCAGACAGCTCACACA
AGCCACCTGCATAGCGTCCGTTGGTGGCTTCTGGATGACCTGGCAGTGTGTCTGAACATTTTCT
CAGGGAAACAGCAGTTGCAATGCTATGTGAATAAAGGGAGAAAGGAGTTGTTGTTTGCTGAGCT
CCTGTGGAGCCAAGCGACTCTAGCCCTCACAGTAGTCCTTAGGAACACACTGACGTTACGCACT
TTTGCAGGCAGGAAATAGATTCAGAAGAGACGAACTTTCCCGGTGTTACACAGCTAGTGTTGCT
ACATTCTAGAAACATGCCTAGGCTATAAAAGCTTTGTTCTTTAAGCCACTAAATTGTTAACTGC
AGTCTTCTGTGCAATAATGTACGTTACAATAACAGTTTCAGTGACTTTGAAACAGCAGTGGGGC
ACTCTGAGCACTGTAAGATACCCGTTCCACTTGGCCTCTGTGGTCTAGGAGATGCCCAGGCTGT
GGGTGAACGGGTCACCTTCTCGTTAGGCCCTGGATGCTGCATCCGTTCCCTTTGTTCTGAGTGT
GCTCCCCACCGCTGGCCCACAGTTTGCTATGCCCAGACGCTCTCACTTCAGGCAGAGCAGTGCA
TGGCACTAAAGCTGTCAGCCTGACCCCTCTTTTCCTGACAGCTTCTCTCTGATGACCTCTGTGC
TTGTTTCCTGCCCCCAGCCCAAACGTTTGTTAGAAGACTGAGTGGATTTATGCACTGAGTCCTG
CCCAGAGACCAGTCTCGACTCAGCCGTACCTCATTTTCCATCCTTAAATGCCAAAAAGTGTGAA
GTTTGTTACTTAGCCAGCTTTACGGGCGAGGACTGGGCACCTCGTCATATGTGTGTTCTGTGCA
CCCCGTGTGTTAGCTTTGTCCCAGCTCTGCTGCTTTAGTAATGCAGATATGGGTCACTCTGTTT
CCAGTCCACAAGACAGAGGTCTGCCACCTTGTTTTCTGCCTTTGCCCTGCTTTGCTAGTTGTGT
ACTGGATCATTCTGCTCTTCAACCCTAGAGCTCACCACTTGTCCCTAGTATCCTGGTAGTTCGG
ACAGTGGTGTATTAACTTGTCTTTGGTTGGCATTTGACTTGTGAATGAAGATTCTGATTACTAT
ATGTGTTTGACTAGGGGACAATCAAAAGATCAGAACCACTACAACAAAGGCTGATGTGTGCATG
TTAAGGATGTTTTATGTTATGTAATTTGCGGAGATGGCTTAGCCTCTAGGGCTGTCATTTGTAT
ATAATACTAGGACTTAAAGTATTCAGGACGGGGAGTCAGGAAGGGAAGGTGGAAGGACATGGAA
ACCTTGAACAAGAGTTGGAATTCAAGAAGATGGCCTGGAACCCGTGCAGTGTCTCACCGCCTCC
AGCTTCAATGATGTTTGTATCCTGCAGAAGAAGCTAGTGTCCTTAGGAGCATCTGGCCTAGGAC
TAGAGAAGCTAAAGGAAGACCCAGGGAAATTGTAGCCGCTGAAGGCCTGGCTGTAGGACTTGCT
GTTTCCCCGTACCAAGGTGAGACAGCAGACTAATGACAGCTTGTATGAACTGCAACATGCTTGC
TGTCCCTGCACCAACCTTCCAAGTGTTAAGAACAGCCTGCTGCTGCTGCTTCACTTCTACTAGC
CACAGCCTTTCTGTGGATGTTCTTAACTGGAATGTATGGGGAAGGATCCCAGGAAGCATAGTCT
AGTCAAGGTGACATGTTAGAAAGCCACCTTACCATGACTCAGCTCCATGAGGTCTCACCACTCA
CCTGAGGATAACGTAACAAAACTACATTGCTGAAAAGGTAAAGCTGGAGACCATGGATTTCGTG
ATGGTCCCAGCAAGTAAAGAAATCATGTCCCGCTGATCCAGAACAGTCTTGCTGATCTCAGCTG
TATTTGTGTTATTCATCCAAGTCTTGAAAGCTTAGCTCACTGTACATAATACTGAGATTCAGAA
GTGCAGTTTTATAAAATGCATCAATATATATTACAAGTGATAAAATAGCTCCGGTTTACTATGG
ACTTCGATGCTGAAATATAGAATTGAGTATACTGTGGAGAAGCCAGTCCTTTTTTGAGTTTTTT
TTTCAAAGTAGTATAGTAGTTGGAAACAACTTAATCATTTCTATTTCTAAGGTGTTCTATTGTA
AAGTTATTTTAAAACAAATTCTCCTGTTCTATTACTTGTTTTTTCTGTTAGTGTTTCTTTGTGG
GGATGTTTGGTGGTGGTAACAGTGTTGACTGCTGTGGGAAATTGGGATAGTGGGTGTCAGGATT
ATGGTCAGTTGTGTTATTTCCCCTGGCTTCCGTGGGGTGGCTGCAGGCTGAGGCCTGACTGCAC
TTGTTGCTCATCCCACCATGCAGCCAGTCAGGCTCCTCCGGGCCTAGGCTGCTTGAGAATGCCA
TTGGGTAGCTTTTAAAGCTGGTGCCAGCTGCCGTGGGGCAGAGCCTCTGCCTGCAAAGCCCCTT
GATGTTTGGAAAAGCTGGTTTTACTCTTGAGAGAGTGGTGAAACGGTCTAAACGAGAGCTAGTG
TGGCCAGGCTCATGGGCTAACTGCTCTTCTGTGTGAGCTCAAGATGGTCCTATGATGTCTGCAA
GCACTGGCTGCCTCTAAGGGTCAGCTTCCCTGGGCCTTCCCAGACTCACCAACAAGACCTCTGT
GGCGACCCAAACCCTGGTCTCTGGGGTTCACAAACCCTGCTGAAGGGATCTGTTCCCTCTGTAG
AGGGTGTGCTGGGGGTGAGGGGGACACCCACCTGAAGGCCACCACTGAGCACTCAGTTGAGGGA
GCTGCCTCTGGACATGGTCTGGAAACCCAGACAGCCTCTTAATTTTTTTTCTTTTTTTGTTTCA
GGCTACATAAACTGTTAGCAGTAAATGAAAATGAGTATTTTACTGAGCTGCAGTTGAAAGAAGA
AATATTGTAGGAGAGAAAAGCAATTATTATTAAGAGAAGAAAGACATTCTTTTGTGGCTGAAAA
GCTGAACCTGGAATTCAGGAAATGGAATCTAAATCTAGAGATGTACCATGTAGAAAATCTGAAG
TGGGTGGGTTACAAATAATTAAGCACACTAATTTGAAGAAAACCATCCTTAAACATGTGTACAC
ATGGATTGCACTTAGTATCTGTCAGTGACTGGCCTTATTACTGTCCTCCCCCTTCCTCTTCTTG
TTCCCCCATCCCTCTTAACAGGGGCACCACAGTAGCAGTCAGTTTGCTCTTAAGCAGTGTAACT
CCGTTTTATGGTTACTAGGAGCTACAACTCTGGTTTCCATGTATGCTGAAGACCGTCTAGTTTC
CTGGACTGCATTGCCAGTTTTGCCTGGGATCCCGATTCTCAAGAATTGAGTATCTGAACTTCTG
ATCCGAAGCTCATTCCTCCAGTCAGACAACTGCCCTGCTAGTATTTCTGATCTGCCCTCTTCCT
GTGTTAGCCCAAAGTGTGGGCCCCATTTTCTGTTCAGTGCAGTAGGAAGATTTTGTTCACAGAT
CTTACTGGTTGTGTAGCTCGACAAGGCACTTTGGCTTCCTGAGCCTTAGTTGACTTCACTGCAA
ACTAAAGCCAATACCCTCAGTTCCTTCAACCCTGTAAGAATTTTGTCAACCTCAAAGGTTGTTT
CTGGAAATACTTTGCAAATTGTAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_017600882 ⟹ XP_017456371

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	70,145,119 - 70,159,744 (+)	NCBI
mRatBN7.2	18	67,869,870 - 67,884,501 (+)	NCBI
Rnor_6.0	18	70,248,570 - 70,263,190 (+)	NCBI

Sequence:

show sequence

ACCGCAATACGCAGGCGCGGAGCCTCCCCATTGAGGGCACGCGTGACAAGGCTGCACACACAGG
TGCTGGTCCTAGTCGGAGCCCCAAAGGCAAGCATTGGGTTTCCGGTTCCGGGACTAACCAACCG
CCGCAGAGGCGACAACTACTGTTTTGGAAGAGGCTGCGGTGGAAGAGGAGGAAGAAGAAGAGTA
GAACCGGCGGGTCGCGCAAGCGGGATCCTTCCCATGGGTCCACCGGCCTAGAGCCGAGGAAGCT
GCGAGCCTGGTGTCAAGCTGGCTTCTGAAGCATCTATGGCTGAGGCCTGGCAGGACTGCCCAGC
CCTGGGCCCTGGCTGGAAACGCCGAGAGGCCTTTCGAAAGTCAGGGGCCTCGTGTGGACGCTCA
GACATCTATTATCGGAGCCCCACAGGAGAAAAGATCCGAAGCAAAATTGAGCTGACTCGATACC
TGGGCCCTGCATGCGATCTTACCCTGTTTGACTTCAGACAAGGCATCTTATGCCACCCAGTTCC
CAAGACCCATCCCTTGGCTGTCCCCAGCAAGAAGAAAAAGAAGACTTCTAAACCAGCCAAGGCT
AAGAAACAGCAGGTTGGGCCACAGAGAAGTGAGGTCAGGAAAGAGACTCCACGGGAAGGAAATA
AGGTCGCTCCTGCCACAGCTTTATTACCTGTGACTGCGTCTGCGCCTGCACCTGTGCCTGTGCC
TGTGTCTGCACCTGCGCCTGCACCTGCACCTTTGTGCTGTGAGAATTGTGGAATCCACCTGTCA
TGGGATGGTATCAAAAGGGAGAGACGCAGGACATTGTGCAAAGACTGCCGAGCACAGAGAATTG
CCTTCAACCGAGAACAGCGAATGTTTAAGCGAGTTGGCTGTGGGGAGTGCACAGCTTGCCTGGT
GAAAGAAGACTGCGGGGTGTGCTCCATCTGCTGCCTGCAGCTGCCCAACGATGTGGCCTCAGGG
CTCTTCTGCAAGTGTGAGCAGAGACGCTGCCTGCGGATTGTGGAGAAGGGTAAATATGATCATA
GTAAGAGAGGCCCGAGGGTAGCTTCTCGACGTCACTCCCGAGCCCCGCCACTTCCTCCACACGC
TGCGTCACAGCATCCAGAGCCCACAGAACTGCACATCAGCGACCAAACGCCCACAGCACCTGCT
GAGTTCGTCTATGACTGTGTAGAGGAGGACGAGCTACAGCCCTATACGAACCAGCGGCAGAACC
GCAAGTGTGGGGCCTGTGCAGCCTGCCTACGGCGGATGGACTGTGGCCACTGCGACTTCTGCTG
TGACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCAGTGCCTG
CAGTTTGCCATGAAGCGGCTGCTGCCCAGTATTGGGCCAGGGTCTGAGGAGGAAGCAAGATTGC
TTCCACATCATACCCACCAAAAGAGGTCTGCTTCTACTCGACAGCTGCAACTGAGCTCTCCCTT
AAAGGCTCCTTTGGCTGTGGTCACAACCCCACCGGGCCCTGTCCAAGATTCAGGGAAGCGGCAA
GCAGGTAGTGGCTTTGTACTGCCCCAACCTGACACAGACCTTGTGTATTTACAAGAGGGTACCA
GCAGTCTCATGCAGGTGCCTGGCCCTGCTGCAGCTTCCACAGAAAACCCAGCACAGGAGACCCA
GGGCTCTGCCCCAGGTTGGGTTGTGGCCTTGCCCCAGGTGAAGCAAGAGAAGGCGGATGCCCCA
GAGGAGTGGACAGCAGTCACAACCTTCCTGACTTCTTCCACGGTGCAGCCTGGCTTCCTTAGCA
AGGCGTCAGGCCTGGACCCTCCACCTGTGAAACGAGAGCCCCCTGGCCCTGAGGAGGATGGAGA
AGAGAACAAAGAAGATGATGTCTCTGAATCAGCTCCAGCAGAAGAGATAGGAGGGATTGGCACC
CCAGTGATCACGGAGATTTTCAGCCTGGGTGGAACCCGCCTCCGGGATGCAGAAGCCTGGTTGC
CAAGGCTACATAAACTGTTAGCAGTAAATGAAAATGAGTATTTTACTGAGCTGCAGTTGAAAGA
AGAAATATTGTAGGAGAGAAAAGCAATTATTATTAAGAGAAGAAAGACATTCTTTTGTGGCTGA
AAAGCTGAACCTGGAATTCAGGAAATGGAATCTAAATCTAGAGATGTACCATGTAGAAAATCTG
AAGTGGGTGGGTTACAAATAATTAAGCACACTAATTTGAAGAAAACCATCCTTAAACATGTGTA
CACATGGATTGCACTTAGTATCTGTCAGTGACTGGCCTTATTACTGTCCTCCCCCTTCCTCTTC
TTGTTCCCCCATCCCTCTTAACAGGGGCACCACAGTAGCAGTCAGTTTGCTCTTAAGCAGTGTA
ACTCCGTTTTATGGTTACTAGGAGCTACAACTCTGGTTTCCATGTATGCTGAAGACCGTCTAGT
TTCCTGGACTGCATTGCCAGTTTTGCCTGGGATCCCGATTCTCAAGAATTGAGTATCTGAACTT
CTGATCCGAAGCTCATTCCTCCAGTCAGACAACTGCCCTGCTAGTATTTCTGATCTGCCCTCTT
CCTGTGTTAGCCCAAAGTGTGGGCCCCATTTTCTGTTCAGTGCAGTAGGAAGATTTTGTTCACA
GATCTTACTGGTTGTGTAGCTCGACAAGGCACTTTGGCTTCCTGAGCCTTAGTTGACTTCACTG
CAAACTAAAGCCAATACCCTCAGTTCCTTCAACCCTGTAAGAATTTTGTCAACCTCAAAGGTTG
TTTCTGGAAATACTTTGCAAATTGTAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_017600883 ⟹ XP_017456372

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	70,145,117 - 70,159,744 (+)	NCBI
mRatBN7.2	18	67,869,876 - 67,884,501 (+)	NCBI
Rnor_6.0	18	70,248,570 - 70,263,190 (+)	NCBI

Sequence:

show sequence

ACCGCAATACGCAGGCGCGGAGCCTCCCCATTGAGGGCACGCGTGACAAGGCTGCACACACAGG
TGCTGGTCCTAGTCGGAGCCCCAAAGGCAAGCATTGGGTTTCCGGTTCCGGGACTAACCAACCG
CCGCAGAGGCGACAACTACTGTTTTGGAAGAGGCTGCGGTGGAAGAGGAGGAAGAAGAAGAGTA
GAACCGGCGGGTCGCGCAAGCGGGATCCTTCCCATGGGTCCACCGGCCTAGAGCCGAGGAAGCT
GCGAGCCTGGTGTCAAGCTGGCTTCTGAAGCATCTATGGCTGAGGCCTGGCAGGACTGCCCAGC
CCTGGGCCCTGGCTGGAAACGCCGAGAGGCCTTTCGAAAGTCAGGGGCCTCGTGTGGACGCTCA
GACATCTATTATCGGAGCCCCACAGGAGAAAAGATCCGAAGCAAAATTGAGCTGACTCGATACC
TGGGCCCTGCATGCGATCTTACCCTGTTTGACTTCAGACAAGGCATCTTATGCCACCCAGTTCC
CAAGACCCATCCCTTGGCTGTCCCCAGCAAGAAGAAAAAGAAGACTTCTAAACCAGCCAAGGCT
AAGAAACAGCAGGTTGGGCCACAGAGAAGTGAGGTCAGGAAAGAGACTCCACGGGAAGGAAATA
AGGTCGCTCCTGCCACAGCTTTATTACCTGTGACTGCGTCTGCGCCTGCACCTGTGCCTGTGCC
TGTGTCTGCACCTGCGCCTGCACCTGCACCTTTGTGCTGTGAGAATTGTGGAATCCACCTGTCA
TGGGATGGTATCAAAAGGGAGAGACGCAGGACATTGTGCAAAGACTGCCGAGCACAGAGAATTG
CCTTCAACCGAGAACAGCGAATGTTTAAGCGAGTTGGCTGTGGGGAGTGCACAGCTTGCCTGGT
GAAAGAAGACTGCGGGGTGTGCTCCATCTGCTGCCTGCAGCTGCCCAACGATGTGGCCTCAGGG
CTCTTCTGCAAGTGTGAGCAGAGACGCTGCCTGCGGATTGTGGAGAAGAACCGAGGGTGTGGTG
TGTGTCGGGGTTGTCAGACCCAAGAGGACTGTGGCCATTGCCGCATCTGCCTTCGCTTTCCCCG
CCCTGGTCTCAAGCGCCAGTGGAGGTGTTTGCAACGGCGCTGTTTTTGGGGTAAATATGATCAT
AGTAAGAGAGGCCCGAGGGTAGCTTCTCGACGTCACTCCCGAGCCCCGCCACTTCCTCCACACG
CTGCGTCACAGCATCCAGAGCCCACAGAACTGCACATCAGCGACCAAACGCCCACAGCACCTGC
TGAGTTCGTCTATGACTGTGTAGAGGAGGACGAGCTACCCTATACGAACCAGCGGCAGAACCGC
AAGTGTGGGGCCTGTGCAGCCTGCCTACGGCGGATGGACTGTGGCCACTGCGACTTCTGCTGTG
ACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCAGTGCCTGCA
GTTTGCCATGAAGCGGCTGCTGCCCAGTATTGGGCCAGGGTCTGAGGAGGAAGCAAGATTGCTT
CCACATCATACCCACCAAAAGAGGTCTGCTTCTACTCGACAGCTGCAACTGAGCTCTCCCTTAA
AGGCTCCTTTGGCTGTGGTCACAACCCCACCGGGCCCTGTCCAAGATTCAGGGAAGCGGCAAGC
AGGTAGTGGCTTTGTACTGCCCCAACCTGACACAGACCTTGTGTATTTACAAGAGGGTACCAGC
AGTCTCATGCAGGTGCCTGGCCCTGCTGCAGCTTCCACAGAAAACCCAGCACAGGAGACCCAGG
GCTCTGCCCCAGGTTGGGTTGTGGCCTTGCCCCAGGTGAAGCAAGAGAAGGCGGATGCCCCAGA
GGAGTGGACAGCAGTCACAACCTTCCTGACTTCTTCCACGGTGCAGCCTGGCTTCCTTAGCAAG
GCGTCAGGCCTGGACCCTCCACCTGTGAAACGAGAGCCCCCTGGCCCTGAGGAGGATGGAGAAG
AGAACAAAGAAGATGATGTCTCTGAATCAGCTCCAGCAGAAGAGATAGGAGGGATTGGCACCCC
AGTGATCACGGAGATTTTCAGCCTGGGTGGAACCCGCCTCCGGGATGCAGAAGCCTGGTTGCCA
AGGTCCAAGGACCTTAAAAAACCCGGAGCTAAAATGCAGTAGACTGGAGGCCTCTGCTGACTGT
AGGCTGAAGGTGGTATTTGCAGACCGGCTTTGTGGAAACAACCCTGATCCTAAAGGGGCTGGGC
CCTGGCCCGGCTGCAGAGCTTGTGTGGGAACCAACTCTAGGAGGAAAACCTACAAGCACAACCA
AGGAGCAGGCCTGCTCAGTCCTTGGACCTTAGAGGAAGCAAGCTGGAGAGGAAGAGAAAGAGTA
GAAGGCTGGTGGAATGTCTGCTCCTCCGTGGATCTCGATGCAGTGAGAAGTTGGATGGTAGGGT
AGGGAAGGGTAGCTGAAGCCACTGCAGACAGCTCACACAAGCCACCTGCATAGCGTCCGTTGGT
GGCTTCTGGATGACCTGGCAGTGTGTCTGAACATTTTCTCAGGGAAACAGCAGTTGCAATGCTA
TGTGAATAAAGGGAGAAAGGAGTTGTTGTTTGCTGAGCTCCTGTGGAGCCAAGCGACTCTAGCC
CTCACAGTAGTCCTTAGGAACACACTGACGTTACGCACTTTTGCAGGCAGGAAATAGATTCAGA
AGAGACGAACTTTCCCGGTGTTACACAGCTAGTGTTGCTACATTCTAGAAACATGCCTAGGCTA
TAAAAGCTTTGTTCTTTAAGCCACTAAATTGTTAACTGCAGTCTTCTGTGCAATAATGTACGTT
ACAATAACAGTTTCAGTGACTTTGAAACAGCAGTGGGGCACTCTGAGCACTGTAAGATACCCGT
TCCACTTGGCCTCTGTGGTCTAGGAGATGCCCAGGCTGTGGGTGAACGGGTCACCTTCTCGTTA
GGCCCTGGATGCTGCATCCGTTCCCTTTGTTCTGAGTGTGCTCCCCACCGCTGGCCCACAGTTT
GCTATGCCCAGACGCTCTCACTTCAGGCAGAGCAGTGCATGGCACTAAAGCTGTCAGCCTGACC
CCTCTTTTCCTGACAGCTTCTCTCTGATGACCTCTGTGCTTGTTTCCTGCCCCCAGCCCAAACG
TTTGTTAGAAGACTGAGTGGATTTATGCACTGAGTCCTGCCCAGAGACCAGTCTCGACTCAGCC
GTACCTCATTTTCCATCCTTAAATGCCAAAAAGTGTGAAGTTTGTTACTTAGCCAGCTTTACGG
GCGAGGACTGGGCACCTCGTCATATGTGTGTTCTGTGCACCCCGTGTGTTAGCTTTGTCCCAGC
TCTGCTGCTTTAGTAATGCAGATATGGGTCACTCTGTTTCCAGTCCACAAGACAGAGGTCTGCC
ACCTTGTTTTCTGCCTTTGCCCTGCTTTGCTAGTTGTGTACTGGATCATTCTGCTCTTCAACCC
TAGAGCTCACCACTTGTCCCTAGTATCCTGGTAGTTCGGACAGTGGTGTATTAACTTGTCTTTG
GTTGGCATTTGACTTGTGAATGAAGATTCTGATTACTATATGTGTTTGACTAGGGGACAATCAA
AAGATCAGAACCACTACAACAAAGGCTGATGTGTGCATGTTAAGGATGTTTTATGTTATGTAAT
TTGCGGAGATGGCTTAGCCTCTAGGGCTGTCATTTGTATATAATACTAGGACTTAAAGTATTCA
GGACGGGGAGTCAGGAAGGGAAGGTGGAAGGACATGGAAACCTTGAACAAGAGTTGGAATTCAA
GAAGATGGCCTGGAACCCGTGCAGTGTCTCACCGCCTCCAGCTTCAATGATGTTTGTATCCTGC
AGAAGAAGCTAGTGTCCTTAGGAGCATCTGGCCTAGGACTAGAGAAGCTAAAGGAAGACCCAGG
GAAATTGTAGCCGCTGAAGGCCTGGCTGTAGGACTTGCTGTTTCCCCGTACCAAGGTGAGACAG
CAGACTAATGACAGCTTGTATGAACTGCAACATGCTTGCTGTCCCTGCACCAACCTTCCAAGTG
TTAAGAACAGCCTGCTGCTGCTGCTTCACTTCTACTAGCCACAGCCTTTCTGTGGATGTTCTTA
ACTGGAATGTATGGGGAAGGATCCCAGGAAGCATAGTCTAGTCAAGGTGACATGTTAGAAAGCC
ACCTTACCATGACTCAGCTCCATGAGGTCTCACCACTCACCTGAGGATAACGTAACAAAACTAC
ATTGCTGAAAAGGTAAAGCTGGAGACCATGGATTTCGTGATGGTCCCAGCAAGTAAAGAAATCA
TGTCCCGCTGATCCAGAACAGTCTTGCTGATCTCAGCTGTATTTGTGTTATTCATCCAAGTCTT
GAAAGCTTAGCTCACTGTACATAATACTGAGATTCAGAAGTGCAGTTTTATAAAATGCATCAAT
ATATATTACAAGTGATAAAATAGCTCCGGTTTACTATGGACTTCGATGCTGAAATATAGAATTG
AGTATACTGTGGAGAAGCCAGTCCTTTTTTGAGTTTTTTTTTCAAAGTAGTATAGTAGTTGGAA
ACAACTTAATCATTTCTATTTCTAAGGTGTTCTATTGTAAAGTTATTTTAAAACAAATTCTCCT
GTTCTATTACTTGTTTTTTCTGTTAGTGTTTCTTTGTGGGGATGTTTGGTGGTGGTAACAGTGT
TGACTGCTGTGGGAAATTGGGATAGTGGGTGTCAGGATTATGGTCAGTTGTGTTATTTCCCCTG
GCTTCCGTGGGGTGGCTGCAGGCTGAGGCCTGACTGCACTTGTTGCTCATCCCACCATGCAGCC
AGTCAGGCTCCTCCGGGCCTAGGCTGCTTGAGAATGCCATTGGGTAGCTTTTAAAGCTGGTGCC
AGCTGCCGTGGGGCAGAGCCTCTGCCTGCAAAGCCCCTTGATGTTTGGAAAAGCTGGTTTTACT
CTTGAGAGAGTGGTGAAACGGTCTAAACGAGAGCTAGTGTGGCCAGGCTCATGGGCTAACTGCT
CTTCTGTGTGAGCTCAAGATGGTCCTATGATGTCTGCAAGCACTGGCTGCCTCTAAGGGTCAGC
TTCCCTGGGCCTTCCCAGACTCACCAACAAGACCTCTGTGGCGACCCAAACCCTGGTCTCTGGG
GTTCACAAACCCTGCTGAAGGGATCTGTTCCCTCTGTAGAGGGTGTGCTGGGGGTGAGGGGGAC
ACCCACCTGAAGGCCACCACTGAGCACTCAGTTGAGGGAGCTGCCTCTGGACATGGTCTGGAAA
CCCAGACAGCCTCTTAATTTTTTTTCTTTTTTTGTTTCAGGCTACATAAACTGTTAGCAGTAAA
TGAAAATGAGTATTTTACTGAGCTGCAGTTGAAAGAAGAAATATTGTAGGAGAGAAAAGCAATT
ATTATTAAGAGAAGAAAGACATTCTTTTGTGGCTGAAAAGCTGAACCTGGAATTCAGGAAATGG
AATCTAAATCTAGAGATGTACCATGTAGAAAATCTGAAGTGGGTGGGTTACAAATAATTAAGCA
CACTAATTTGAAGAAAACCATCCTTAAACATGTGTACACATGGATTGCACTTAGTATCTGTCAG
TGACTGGCCTTATTACTGTCCTCCCCCTTCCTCTTCTTGTTCCCCCATCCCTCTTAACAGGGGC
ACCACAGTAGCAGTCAGTTTGCTCTTAAGCAGTGTAACTCCGTTTTATGGTTACTAGGAGCTAC
AACTCTGGTTTCCATGTATGCTGAAGACCGTCTAGTTTCCTGGACTGCATTGCCAGTTTTGCCT
GGGATCCCGATTCTCAAGAATTGAGTATCTGAACTTCTGATCCGAAGCTCATTCCTCCAGTCAG
ACAACTGCCCTGCTAGTATTTCTGATCTGCCCTCTTCCTGTGTTAGCCCAAAGTGTGGGCCCCA
TTTTCTGTTCAGTGCAGTAGGAAGATTTTGTTCACAGATCTTACTGGTTGTGTAGCTCGACAAG
GCACTTTGGCTTCCTGAGCCTTAGTTGACTTCACTGCAAACTAAAGCCAATACCCTCAGTTCCT
TCAACCCTGTAAGAATTTTGTCAACCTCAAAGGTTGTTTCTGGAAATACTTTGCAAATTGTAAA
AAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_039096640 ⟹ XP_038952568

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	70,145,117 - 70,159,744 (+)	NCBI
mRatBN7.2	18	67,869,877 - 67,884,501 (+)	NCBI

RefSeq Acc Id:

XM_063277170 ⟹ XP_063133240

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	70,145,119 - 70,159,744 (+)	NCBI

RefSeq Acc Id:

XM_063277171 ⟹ XP_063133241

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	70,145,119 - 70,159,744 (+)	NCBI

RefSeq Acc Id:

XM_063277172 ⟹ XP_063133242

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	70,145,119 - 70,159,744 (+)	NCBI

RefSeq Acc Id:

XR_361462

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	70,145,117 - 70,159,744 (+)	NCBI
mRatBN7.2	18	67,869,877 - 67,884,501 (+)	NCBI
Rnor_6.0	18	70,248,571 - 70,263,190 (+)	NCBI
Rnor_5.0	18	69,390,120 - 69,404,741 (+)	NCBI

Sequence:

show sequence

CCGCAATACGCAGGCGCGGAGCCTCCCCATTGAGGGCACGCGTGACAAGGCTGCACACACAGGT
GCTGGTCCTAGTCGGAGCCCCAAAGGCAAGCATTGGGTTTCCGGTTCCGGGACTAACCAACCGC
CGCAGAGGCGACAACTACTGTTTTGGAAGAGGCTGCGGTGGAAGAGGAGGAAGAAGAAGAGTAG
AACCGGCGGGTCGCGCAAGCGGGATCCTTCCCATGGGTCCACCGGCCTAGAGCCGAGGAAGCTG
CGAGCCTGGTGTCAAGCTGGCTTCTGAAGCATCTATGGCTGAGGCCTGGCAGGACTGCCCAGCC
CTGGGCCCTGGCTGGAAACGCCGAGAGGCCTTTCGAAAGTCAGGGGCCTCGTGTGGACGCTCAG
ACATCTATTATCGGAGCCCCACAGGAGAAAAGATCCGAAGCAAAATTGAGCTGACTCGATACCT
GGGCCCTGCATGCGATCTTACCCTGTTTGACTTCAGACAAGGCATCTTATGCCACCCAGTTCCC
AAGACCCATCCCTTGGCTGTCCCCAGCAAGAAGAAAAAGAAGACTTCTAAACCAGCCAAGGCTA
AGAAACAGCAGGTTGGGCCACAGAGAAGTGAGGTCAGGAAAGAGACTCCACGGGAAGGAAATAA
GGTCGCTCCTGCCACAGCTTTATTACCTGTGACTGCGTCTGCGCCTGCACCTGTGCCTGTGCCT
GTGTCTGCACCTGCGCCTGCACCTGCACCTTTGTGCTGTGAGAATTGTGGAATCCACCTGTCAT
GGGATGGTATCAAAAGGGAGAGACGCAGGACATTGTGCAAAGACTGCCGAGCACAGAGAATTGC
CTTCAACCGAGAACAGCGAATGTTTAAGCGAGTTGGCTGTGGGGAGTGCACAGCTTGCCTGGTG
AAAGAAGACTGCGGGGTGTGCTCCATCTGCTGCCTGCAGCTGCCCAACGATGTGGCCTCAGGGC
TCTTCTGCAAGTGTGAGCAGAGACGCTGCCTGCGGATTGTGGAGAAGAACCGAGGGTGTGGTGT
GTGTCGGGGTTGTCAGACCCAAGAGGACTGTGGCCATTGCCGCATCTGCCTTCGCTTTCCCCGC
CCTGGTCTCAAGCGCCAGTGGAGGTGTTTGCAACGGCGCTGTTTTTGGGGTAAATATGATCATA
GTAAGAGAGGCCCGAGGGTAGCTTCTCGACGTCACTCCCGAGCCCCGCCACTTCCTCCACACGC
TGCGTCACAGCATCCAGAGCCCACAGAACTGCACATCAGCGACCAAACGCCCACAGCACCTGCT
GAGTTCGTCTATGACTGTGTAGAGGAGGACGAGCTACAGCCCTATACGAACCAGCGGCAGAACC
GCAAGTGTGGGGCCTGTGCAGCCTGCCTACGGCGGATGGACTGTGGCCACTGCGACTTCTGCTG
TGACAAGCCCAAATTCGGGGGCAGCAACCAGAAGCGCCAGAAGTGTCGTTGGCGCCAGTGCCTG
CAGTTTGCCATGAAGCGGCTGCTGCCCAGTATTGGGCCAGGGTCTGAGGAGGAAGCAAGATTGC
TTCCACATCATACCCACCAAAAGAGGTCTGCTTCTACTCGACAGCTGCAACTGAGCTCTCCCTT
AAAGGCTCCTTTGGCTGTGGTCACAACCCCACCGGGCCCTGTCCAAGATTCAGGGAAGCGGCAA
GCAGGTAGTGGCTTTGTACTGCCCCAACCTGACACAGACCTTGTGTATTTACAAGAGGGTACCA
GCAGTCTCATGCAGGTGCCTGGCCCTGCTGCAGCTTCCACAGAAAACCCAGCACAGGAGACCCA
GGGCTCTGCCCCAGGTTGGGTTGTGGCCTTGCCCCAGGTGAAGCAAGAGAAGGCGGATGCCCCA
GAGGAGTGGACAGCAGTCACAACCTTCCTGACTTCTTCCACGGTGCAGCCTGGCTTCCTTAGCA
AGGCGTCAGGCCTGGACCCTCCACCTGTGAAACGAGAGCCCCCTGGCCCTGAGGAGGATGGAGA
AGAGAACAAAGAAGATGATGTCTCTGAATCAGCTCCAGCAGAAGAGATAGGAGGGATTGGCACC
CCAGTGATCACGGAGATTTTCAGCCTGGGTGGAACCCGCCTCCGGGATGCAGAAGCCTGGTTGC
CAAGGTCCAAGGACCTTAAAAAACCCGGAGCTAAAATGCAGTAGACTGGAGGCCTCTGCTGACT
GTAGGCTGAAGGTGGTATTTGCAGACCGGCTTTGTGGAAACAACCCTGATCCTAAAGGGGCTGG
GCCCTGGCCCGGCTGCAGAGCTTGTGTGGGAACCAACTCTAGGAGGAAAACCTACAAGCACAAC
CAAGGAGCAGGCCTGCTCAGTCCTTGGACCTTAGAGGAAGCAAGCTGGAGAGGAAGAGAAAGAG
TAGAAGGCTGGTGGAATGTCTGCTCCTCCGTGGATCTCGATGCAGTGAGAAGTTGGATGGTAGG
GTAGGGAAGGGTAGCTGAAGCCACTGCAGACAGCTCACACAAGCCACCTGCATAGCGTCCGTTG
GTGGCTTCTGGATGACCTGGCAGTGTGTCTGAACATTTTCTCAGGGAAACAGCAGTTGCAATGC
TATGTGAATAAAGGGAGAAAGGAGTTGTTGTTTGCTGAGCTCCTGTGGAGCCAAGCGACTCTAG
CCCTCACAGTAGTCCTTAGGAACACACTGACGTTACGCACTTTTGCAGGCAGGAAATAGATTCA
GAAGAGACGAACTTTCCCGGTGTTACACAGCTAGTGTTGCTACATTCTAGAAACATGCCTAGGC
TATAAAAGCTTTGTTCTTTAAGCCACTAAATTGTTAACTGCAGTCTTCTGTGCAATAATGTACG
TTACAATAACAGTTTCAGTGACTTTGAAACAGCAGTGGGGCACTCTGAGCACTGTAAGATACCC
GTTCCACTTGGCCTCTGTGGTCTAGGAGATGCCCAGGCTGTGGGTGAACGGGTCACCTTCTCGT
TAGGCCCTGGATGCTGCATCCGTTCCCTTTGTTCTGAGTGTGCTCCCCACCGCTGGCCCACAGT
TTGCTATGCCCAGACGCTCTCACTTCAGGCAGAGCAGTGCATGGCACTAAAGCTGTCAGCCTGA
CCCCTCTTTTCCTGACAGCTTCTCTCTGATGACCTCTGTGCTTGTTTCCTGCCCCCAGCCCAAA
CGTTTGTTAGAAGACTGAGTGGATTTATGCACTGAGTCCTGCCCAGAGACCAGTCTCGACTCAG
CCGTACCTCATTTTCCATCCTTAAATGCCAAAAAGTGTGAAGTTTGTTACTTAGCCAGCTTTAC
GGGCGAGGACTGGGCACCTCGTCATATGTGTGTTCTGTGCACCCCGTGTGTTAGCTTTGTCCCA
GCTCTGCTGCTTTAGTAATGCAGATATGGGTCACTCTGTTTCCAGTCCACAAGACAGAGGTCTG
CCACCTTGTTTTCTGCCTTTGCCCTGCTTTGCTAGTTGTGTACTGGATCATTCTGCTCTTCAAC
CCTAGAGCTCACCACTTGTCCCTAGTATCCTGGTAGTTCGGACAGTGGTGTATTAACTTGTCTT
TGGTTGGCATTTGACTTGTGAATGAAGATTCTGATTACTATATGTGTTTGACTAGGGGACAATC
AAAAGATCAGAACCACTACAACAAAGGCTGATGTGTGCATGTTAAGGATGTTTTATGTTATGTA
ATTTGCGGAGATGGCTTAGCCTCTAGGGCTGTCATTTGTATATAATACTAGGACTTAAAGTATT
CAGGACGGGGAGTCAGGAAGGGAAGGTGGAAGGACATGGAAACCTTGAACAAGAGTTGGAATTC
AAGAAGATGGCCTGGAACCCGTGCAGTGTCTCACCGCCTCCAGCTTCAATGATGTTTGTATCCT
GCAGAAGAAGCTAGTGTCCTTAGGAGCATCTGGCCTAGGACTAGAGAAGCTAAAGGAAGACCCA
GGGAAATTGTAGCCGCTGAAGGCCTGGCTGTAGGACTTGCTGTTTCCCCGTACCAAGGCTACAT
AAACTGTTAGCAGTAAATGAAAATGAGTATTTTACTGAGCTGCAGTTGAAAGAAGAAATATTGT
AGGAGAGAAAAGCAATTATTATTAAGAGAAGAAAGACATTCTTTTGTGGCTGAAAAGCTGAACC
TGGAATTCAGGAAATGGAATCTAAATCTAGAGATGTACCATGTAGAAAATCTGAAGTGGGTGGG
TTACAAATAATTAAGCACACTAATTTGAAGAAAACCATCCTTAAACATGTGTACACATGGATTG
CACTTAGTATCTGTCAGTGACTGGCCTTATTACTGTCCTCCCCCTTCCTCTTCTTGTTCCCCCA
TCCCTCTTAACAGGGGCACCACAGTAGCAGTCAGTTTGCTCTTAAGCAGTGTAACTCCGTTTTA
TGGTTACTAGGAGCTACAACTCTGGTTTCCATGTATGCTGAAGACCGTCTAGTTTCCTGGACTG
CATTGCCAGTTTTGCCTGGGATCCCGATTCTCAAGAATTGAGTATCTGAACTTCTGATCCGAAG
CTCATTCCTCCAGTCAGACAACTGCCCTGCTAGTATTTCTGATCTGCCCTCTTCCTGTGTTAGC
CCAAAGTGTGGGCCCCATTTTCTGTTCAGTGCAGTAGGAAGATTTTGTTCACAGATCTTACTGG
TTGTGTAGCTCGACAAGGCACTTTGGCTTCCTGAGCCTTAGTTGACTTCACTGCAAACTAAAGC
CAATACCCTCAGTTCCTTCAACCCTGTAAGAATTTTGTCAACCTCAAAGGTTGTTTCTGGAAAT
ACTTTGCAAATTGTAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001011924	(Get FASTA)	NCBI Sequence Viewer
	XP_006254971	(Get FASTA)	NCBI Sequence Viewer
	XP_006254972	(Get FASTA)	NCBI Sequence Viewer
	XP_006254973	(Get FASTA)	NCBI Sequence Viewer
	XP_006254975	(Get FASTA)	NCBI Sequence Viewer
	XP_006254976	(Get FASTA)	NCBI Sequence Viewer
	XP_017456371	(Get FASTA)	NCBI Sequence Viewer
	XP_017456372	(Get FASTA)	NCBI Sequence Viewer
	XP_038952568	(Get FASTA)	NCBI Sequence Viewer
	XP_063133240	(Get FASTA)	NCBI Sequence Viewer
	XP_063133241	(Get FASTA)	NCBI Sequence Viewer
	XP_063133242	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH81932	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000037640.4
	ENSRNOP00000078508.1
	ENSRNOP00000086562.1
	ENSRNOP00000097211.1
	ENSRNOP00000097486.1

RefSeq Acc Id:

NP_001011924 ⟸ NM_001011924

- UniProtKB:

Q66HB8 (UniProtKB/TrEMBL), A0A8I6GMJ2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAEAWQDCPALGPGWKRREAFRKSGASCGRSDIYYRSPTGEKIRSKIELTRYLGPACDLTLFDF
RQGILCHPVPKTHPLAVPSKKKKKTSKPAKAKKQQVGPQRSEVRKETPREGNKVAPATALLPVT
ASAPAPVPVPVSAPAPAPAPLCCENCGIHLSWDGIKRERRRTLCKDCRAQRIAFNREQRMFKRV
GCGECTACLVKEDCGVCSICCLQLPNDVASGLFCKCEQRRCLRIVEKGKYDHSKRGPRVASRRH
SRAPPLPPHAASQHPEPTELHISDQTPTAPAEFVYDCVEEDELKRLLPSIGPGSEEEARLLPHH
THQKRSASTRQLQLSSPLKAPLAVVTTPPGPVQDSGKRQAGSGFVLPQPDTDLVYLQEGTSSLM
QVPGPAAASTENPAQETQGSAPGWVVALPQVKQEKADAPEEWTAVTTFLTSSTVQPGFLSKASG
LDPPPVKREPPGPEEDGEENKEDDVSESAPAEEIGGIGTPVITEIFSLGGTRLRDAEAWLPRLH
KLLAVNENEYFTELQLKEEIL

hide sequence

RefSeq Acc Id:	XP_006254973 ⟸ XM_006254911
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6A3W5 (UniProtKB/TrEMBL), A0A8I6AS94 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEAWQDCPALGPGWKRREAFRKSGASCGRSDIYYRSPTGEKIRSKIELTRYLGPACDLTLFDF RQGILCHPVPKTHPLAVPSKKKKKTSKPAKAKKQQVGPQRSEVRKETPREGNKVAPATALLPVT ASAPAPVPVPVSAPAPAPAPLCCENCGIHLSWDGIKRERRRTLCKDCRAQRIAFNREQRMFKRV GCGECTACLVKEDCGVCSICCLQLPNDVASGLFCKCEQRRCLRIVEKNRGCGVCRGCQTQEDCG HCRICLRFPRPGLKRQWRCLQRRCFWGKYDHSKRGPRVASRRHSRAPPLPPHAASQHPEPTELH ISDQTPTAPAEFVYDCVEEDELQPYTNQRQNRKCGACAACLRRMDCGHCDFCCDKPKFGGSNQK RQKCRWRQCLQFAMKRLLPSIGPGSEEEARLLPHHTHQKRSASTRQLQLSSPLKAPLAVVTTPP GPVQDSGKRQAGSGFVLPQPDTDLVYLQEGTSSLMQVPGPAAASTENPAQETQGSAPGWVVALP QVKQEKADAPEEWTAVTTFLTSSTVQPGFLSKASGLDPPPVKREPPGPEEDGEENKEDDVSESA PAEEIGGIGTPVITEIFSLGGTRLRDAEAWLPRSKDLKKPGAKMQ hide sequence

RefSeq Acc Id:	XP_006254971 ⟸ XM_006254909
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6AS94 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEAWQDCPALGPGWKRREAFRKSGASCGRSDIYYRSPTGEKIRSKIELTRYLGPACDLTLFDF RQGILCHPVPKTHPLAVPSKKKKKTSKPAKAKKQQVGPQRSEVRKETPREGNKVAPATALLPVT ASAPAPVPVPVSAPAPAPAPLCCENCGIHLSWDGIKRERRRTLCKDCRAQRIAFNREQRMFKRV GCGECTACLVKEDCGVCSICCLQLPNDVASGLFCKCEQRRCLRIVEKNRGCGVCRGCQTQEDCG HCRICLRFPRPGLKRQWRCLQRRCFWGKYDHSKRGPRVASRRHSRAPPLPPHAASQHPEPTELH ISDQTPTAPAEFVYDCVEEDELQPYTNQRQNRKCGACAACLRRMDCGHCDFCCDKPKFGGSNQK RQKCRWRQCLQFAMKRLLPSIGPGSEEEARLLPHHTHQKRSASTRQLQLSSPLKAPLAVVTTPP GPVQDSGKRQAGSGFVLPQPDTDLVYLQEGTSSLMQVPGPAAASTENPAQETQGSAPGWVVALP QVKQEKADAPEEWTAVTTFLTSSTVQPGFLSKASGLDPPPVKREPPGPEEDGEENKEDDVSESA PAEEIGGIGTPVITEIFSLGGTRLRDAEAWLPRLHKLLAVNENEYFTELQLKEEIL hide sequence

RefSeq Acc Id:	XP_006254972 ⟸ XM_006254910
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AS94 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEAWQDCPALGPGWKRREAFRKSGASCGRSDIYYRSPTGEKIRSKIELTRYLGPACDLTLFDF RQGILCHPVPKTHPLAVPSKKKKKTSKPAKAKKQQVGPQRSEVRKETPREGNKVAPATALLPVT ASAPAPVPVPVSAPAPAPAPLCCENCGIHLSWDGIKRERRRTLCKDCRAQRIAFNREQRMFKRV GCGECTACLVKEDCGVCSICCLQLPNDVASGLFCKCEQRRCLRIVEKNRGCGVCRGCQTQEDCG HCRICLRFPRPGLKRQWRCLQRRCFWGKYDHSKRGPRVASRRHSRAPPLPPHAASQHPEPTELH ISDQTPTAPAEFVYDCVEEDELPYTNQRQNRKCGACAACLRRMDCGHCDFCCDKPKFGGSNQKR QKCRWRQCLQFAMKRLLPSIGPGSEEEARLLPHHTHQKRSASTRQLQLSSPLKAPLAVVTTPPG PVQDSGKRQAGSGFVLPQPDTDLVYLQEGTSSLMQVPGPAAASTENPAQETQGSAPGWVVALPQ VKQEKADAPEEWTAVTTFLTSSTVQPGFLSKASGLDPPPVKREPPGPEEDGEENKEDDVSESAP AEEIGGIGTPVITEIFSLGGTRLRDAEAWLPRLHKLLAVNENEYFTELQLKEEIL hide sequence

RefSeq Acc Id:	XP_006254975 ⟸ XM_006254913
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I6GMJ2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEAWQDCPALGPGWKRREAFRKSGASCGRSDIYYRSPTGEKIRSKIELTRYLGPACDLTLFDF RQGILCHPVPKTHPLAVPSKKKKKTSKPAKAKKQQVGPQRSEVRKETPREGNKVAPATALLPVT ASAPAPVPVPVSAPAPAPAPLCCENCGIHLSWDGIKRERRRTLCKDCRAQRIAFNREQRMFKRV GCGECTACLVKEDCGVCSICCLQLPNDVASGLFCKCEQRRCLRIVEKNRGCGVCRGCQTQEDCG HCRICLRFPRPGLKRQWRCLQRRCFWGKYDHSKRGPRVASRRHSRAPPLPPHAASQHPEPTELH ISDQTPTAPAEFVYDCVEEDELKRLLPSIGPGSEEEARLLPHHTHQKRSASTRQLQLSSPLKAP LAVVTTPPGPVQDSGKRQAGSGFVLPQPDTDLVYLQEGTSSLMQVPGPAAASTENPAQETQGSA PGWVVALPQVKQEKADAPEEWTAVTTFLTSSTVQPGFLSKASGLDPPPVKREPPGPEEDGEENK EDDVSESAPAEEIGGIGTPVITEIFSLGGTRLRDAEAWLPRLHKLLAVNENEYFTELQLKEEIL hide sequence

RefSeq Acc Id:	XP_006254976 ⟸ XM_006254914
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I5ZMU8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEAWQDCPALGPGWKRREAFRKSGASCGRSDIYYRSPTGEKIRSKIELTRYLGPACDLTLFDF RQGILCHPVPKTHPLAVPSKKKKKTSKPAKAKKQQVGPQRSEVRKETPREGNKVAPATALLPVT ASAPAPVPVPVSAPAPAPAPLCCENCGIHLSWDGIKRERRRTLCKDCRAQRIAFNREQRMFKRV GCGECTACLVKEDCGVCSICCLQLPNDVASGLFCKCEQRRCLRIVEKNRGCGVCRGCQTQEDCG HCRICLRFPRPGLKRQWRCLQRRCFWGKYDHSKRGPRVASRRHSRAPPLPPHAASQHPEPTELH ISDQTPTAPAEFVYDCVEEDELKRLLPSIGPGSEEEARLLPHHTHQKRSASTRQLQLSSPLKAP LAVVTTPPGPVQDSGKRQAGSGFVLPQPDTDLVYLQEGTSSLMQVPGPAAASTENPAQETQGSA PGWVVALPQVKQEKADAPEEWTAVTTFLTSSTVQPGFLSKASGLDPPPVKREPPGPEEDGEENK EDDVSESAPAEEIGGIGTPVITEIFSLGGTRLRDAEAWLPRSKDLKKPGAKMQ hide sequence

RefSeq Acc Id:	XP_017456372 ⟸ XM_017600883
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6AS94 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEAWQDCPALGPGWKRREAFRKSGASCGRSDIYYRSPTGEKIRSKIELTRYLGPACDLTLFDF RQGILCHPVPKTHPLAVPSKKKKKTSKPAKAKKQQVGPQRSEVRKETPREGNKVAPATALLPVT ASAPAPVPVPVSAPAPAPAPLCCENCGIHLSWDGIKRERRRTLCKDCRAQRIAFNREQRMFKRV GCGECTACLVKEDCGVCSICCLQLPNDVASGLFCKCEQRRCLRIVEKNRGCGVCRGCQTQEDCG HCRICLRFPRPGLKRQWRCLQRRCFWGKYDHSKRGPRVASRRHSRAPPLPPHAASQHPEPTELH ISDQTPTAPAEFVYDCVEEDELPYTNQRQNRKCGACAACLRRMDCGHCDFCCDKPKFGGSNQKR QKCRWRQCLQFAMKRLLPSIGPGSEEEARLLPHHTHQKRSASTRQLQLSSPLKAPLAVVTTPPG PVQDSGKRQAGSGFVLPQPDTDLVYLQEGTSSLMQVPGPAAASTENPAQETQGSAPGWVVALPQ VKQEKADAPEEWTAVTTFLTSSTVQPGFLSKASGLDPPPVKREPPGPEEDGEENKEDDVSESAP AEEIGGIGTPVITEIFSLGGTRLRDAEAWLPRSKDLKKPGAKMQ hide sequence

RefSeq Acc Id:	XP_017456371 ⟸ XM_017600882
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6AS94 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEAWQDCPALGPGWKRREAFRKSGASCGRSDIYYRSPTGEKIRSKIELTRYLGPACDLTLFDF RQGILCHPVPKTHPLAVPSKKKKKTSKPAKAKKQQVGPQRSEVRKETPREGNKVAPATALLPVT ASAPAPVPVPVSAPAPAPAPLCCENCGIHLSWDGIKRERRRTLCKDCRAQRIAFNREQRMFKRV GCGECTACLVKEDCGVCSICCLQLPNDVASGLFCKCEQRRCLRIVEKGKYDHSKRGPRVASRRH SRAPPLPPHAASQHPEPTELHISDQTPTAPAEFVYDCVEEDELQPYTNQRQNRKCGACAACLRR MDCGHCDFCCDKPKFGGSNQKRQKCRWRQCLQFAMKRLLPSIGPGSEEEARLLPHHTHQKRSAS TRQLQLSSPLKAPLAVVTTPPGPVQDSGKRQAGSGFVLPQPDTDLVYLQEGTSSLMQVPGPAAA STENPAQETQGSAPGWVVALPQVKQEKADAPEEWTAVTTFLTSSTVQPGFLSKASGLDPPPVKR EPPGPEEDGEENKEDDVSESAPAEEIGGIGTPVITEIFSLGGTRLRDAEAWLPRLHKLLAVNEN EYFTELQLKEEIL hide sequence

Ensembl Acc Id:

ENSRNOP00000037640 ⟸ ENSRNOT00000032202

RefSeq Acc Id:	XP_038952568 ⟸ XM_039096640
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6AS94 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000078508 ⟸ ENSRNOT00000102132

Ensembl Acc Id:

ENSRNOP00000097486 ⟸ ENSRNOT00000099489

Ensembl Acc Id:

ENSRNOP00000097211 ⟸ ENSRNOT00000113558

Ensembl Acc Id:

ENSRNOP00000086562 ⟸ ENSRNOT00000111311

RefSeq Acc Id:	XP_063133242 ⟸ XM_063277172
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_063133240 ⟸ XM_063277170
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063133241 ⟸ XM_063277171
- Peptide Label:	isoform X10

Protein Domains

CXXC-type MBD

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q66HB8-F1-model_v2	AlphaFold	Q66HB8	1-533	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13700865

Promoter ID:

EPDNEW_R11388

Type:

initiation region

Name:

Mbd1_1

Description:

methyl-CpG binding domain protein 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	18	70,248,700 - 70,248,760	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1305980	AgrOrtholog
BioCyc Gene	G2FUF-7032	BioCyc
Ensembl Genes	ENSRNOG00000024104	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000032202.5	UniProtKB/TrEMBL
	ENSRNOT00000099489.1	UniProtKB/TrEMBL
	ENSRNOT00000102132.1	UniProtKB/TrEMBL
	ENSRNOT00000111311.1	UniProtKB/TrEMBL
	ENSRNOT00000113558.1	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7114194	IMAGE-MGC_LOAD
InterPro	DNA-bd_integrase-typ	UniProtKB/TrEMBL
	Methyl_CpG_DNA-bd	UniProtKB/TrEMBL
	Znf_CXXC	UniProtKB/TrEMBL
KEGG Report	rno:291439	UniProtKB/TrEMBL
MGC_CLONE	MGC:93958	IMAGE-MGC_LOAD
NCBI Gene	291439	ENTREZGENE
PANTHER	METHYL-CPG BINDING DOMAIN PROTEIN-LIKE, ISOFORM C	UniProtKB/TrEMBL
	METHYL-CPG BINDING PROTEIN, MBD	UniProtKB/TrEMBL
	METHYL-CPG-BINDING DOMAIN PROTEIN 1	UniProtKB/TrEMBL
Pfam	MBD	UniProtKB/TrEMBL
	zf-CXXC	UniProtKB/TrEMBL
PhenoGen	Mbd1	PhenoGen
PROSITE	MBD	UniProtKB/TrEMBL
	ZF_CXXC	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000024104	RatGTEx
SMART	MBD	UniProtKB/TrEMBL
Superfamily-SCOP	DNA-binding_integrase-type	UniProtKB/TrEMBL
UniProt	A0A8I5ZMU8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A3W5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AS94	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6GMJ2	ENTREZGENE, UniProtKB/TrEMBL
	Q66HB8	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-12-06	Mbd1	methyl-CpG binding domain protein 1	Mbd1_predicted	methyl-CpG binding domain protein 1 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Mbd1_predicted	methyl-CpG binding domain protein 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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