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Gene: Igfbpl1 (insulin-like growth factor binding protein-like 1) Rattus norvegicus

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Symbol:

Igfbpl1

Name:

insulin-like growth factor binding protein-like 1

RGD ID:

1305656

Description:

Predicted to enable insulin-like growth factor binding activity. Predicted to be involved in cellular response to tumor cell and regulation of signal transduction. Predicted to be located in extracellular region. Predicted to be active in extracellular matrix and extracellular space. Orthologous to human IGFBPL1 (insulin like growth factor binding protein like 1); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 6-propyl-2-thiouracil; acrylamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

insulin-like growth factor-binding protein-like 1; LOC366366

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	64,872,056 - 64,887,461 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	64,872,057 - 64,887,461 (-)	Ensembl				GRCr8
mRatBN7.2	5	60,076,428 - 60,091,833 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	60,076,429 - 60,091,833 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	62,051,012 - 62,066,418 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	63,870,525 - 63,885,933 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	63,839,761 - 63,855,167 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	61,395,407 - 61,410,812 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	61,395,408 - 61,410,812 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	65,911,663 - 65,927,068 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	62,324,324 - 62,339,729 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	58,641,004 - 58,656,411 (-)	NCBI		Celera
RGSC_v3.1	5	62,324,510 - 62,339,761 (-)	NCBI
Cytogenetic Map	5	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-catechin (ISO)

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,4,4'-trichlorobiphenyl (ISO)

3-methylcholanthrene (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP)

all-trans-retinoic acid (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

butanal (ISO)

Butylbenzyl phthalate (ISO)

cadmium dichloride (EXP)

CGP 52608 (ISO)

clofibrate (ISO)

cobalt dichloride (EXP)

Cuprizon (EXP)

dorsomorphin (ISO)

entinostat (ISO)

ethanol (ISO)

fenamidone (ISO)

fenvalerate (EXP)

flusilazole (EXP)

ketamine (EXP)

lead diacetate (EXP)

lead(0) (ISO)

nickel dichloride (EXP)

okadaic acid (ISO)

paracetamol (ISO)

paraquat (EXP)

PCB138 (ISO)

resveratrol (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sodium dichromate (EXP)

sunitinib (ISO)

T-2 toxin (EXP)

tamoxifen (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to tumor cell (ISO)

regulation of cell growth (IEA)

regulation of signal transduction (IBA)

signal transduction (IEA)

Cellular Component

extracellular region (IEA)

extracellular space (IBA,ISO)

Molecular Function

insulin-like growth factor binding (IEA)

protein binding (ISO)

receptor ligand activity (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:15845387

Genomics

Comparative Map Data

Igfbpl1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	64,872,056 - 64,887,461 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	64,872,057 - 64,887,461 (-)	Ensembl				GRCr8
mRatBN7.2	5	60,076,428 - 60,091,833 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	60,076,429 - 60,091,833 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	62,051,012 - 62,066,418 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	63,870,525 - 63,885,933 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	63,839,761 - 63,855,167 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	61,395,407 - 61,410,812 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	61,395,408 - 61,410,812 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	65,911,663 - 65,927,068 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	62,324,324 - 62,339,729 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	58,641,004 - 58,656,411 (-)	NCBI		Celera
RGSC_v3.1	5	62,324,510 - 62,339,761 (-)	NCBI
Cytogenetic Map	5	q22	NCBI

IGFBPL1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	38,406,528 - 38,424,454 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	38,406,528 - 38,424,454 (-)	Ensembl			hg38	GRCh38
GRCh37	9	38,406,525 - 38,424,451 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	38,398,991 - 38,414,444 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	9	38,341,932 - 38,357,387 (-)	NCBI		Celera
Cytogenetic Map	9	p13.1	NCBI
HuRef	9	38,358,896 - 38,376,765 (-)	NCBI		HuRef
CHM1_1	9	38,408,294 - 38,426,200 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	38,430,707 - 38,448,634 (-)	NCBI		T2T-CHM13v2.0

Igfbpl1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	45,809,507 - 45,826,827 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	45,809,468 - 45,826,923 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	4	45,809,507 - 45,826,827 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	45,809,468 - 45,826,923 (-)	Ensembl			mm10	GRCm38
MGSCv37	4	45,822,379 - 45,839,699 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	4	45,819,642 - 45,847,915 (-)	NCBI		MGSCv36	mm8
Celera	4	45,834,027 - 45,851,532 (-)	NCBI		Celera
Cytogenetic Map	4	B1	NCBI
cM Map	4	24.36	NCBI

Igfbpl1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955419	28,133,527 - 28,144,578 (+)	Ensembl
ChiLan1.0	NW_004955419	28,133,512 - 28,148,462 (+)	NCBI	ChiLan1.0	ChiLan1.0

IGFBPL1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	86,166,129 - 86,184,177 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	86,172,063 - 86,190,119 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	38,253,300 - 38,271,260 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	39,175,131 - 39,192,684 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2

IGFBPL1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	54,586,337 - 54,596,218 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	53,014,367 - 53,031,635 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	55,697,563 - 55,714,916 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	55,697,572 - 55,714,990 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	54,195,261 - 54,212,589 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	54,225,342 - 54,242,612 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	54,921,804 - 54,939,126 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Igfbpl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	169,547,489 - 169,561,760 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936524	6,098,256 - 6,109,691 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936524	6,095,077 - 6,109,340 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

IGFBPL1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	239,120,618 - 239,136,369 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	239,120,617 - 239,136,387 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	267,174,650 - 267,190,426 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

IGFBPL1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	42,165,105 - 42,179,997 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	42,165,346 - 42,177,605 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666038	39,223,012 - 39,238,389 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Igfbpl1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624825	3,513,796 - 3,529,351 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624825	3,513,720 - 3,530,479 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Igfbpl1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	676,058 - 691,653 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Igfbpl1
137 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	46
Count of miRNA genes:	37
Interacting mature miRNAs:	44
Transcripts:	ENSRNOT00000015270
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578776	Stresp18	Stress response QTL 18	2.9		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	5	32751649	77751649	Rat
1298067	Scl15	Serum cholesterol level QTL 15	4.8	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	38011670	83011670	Rat
1300115	Hrtrt7	Heart rate QTL 7	2.76		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	5	52665372	94894052	Rat
6907115	Mcs29	Mammary carcinoma susceptibility QTL 29			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	38004331	83004331	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	44924861	153890773	Rat
1358353	Srcrtb2	Stress Responsive Cort Basal QTL 2	3.48	0.003	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	5	23671493	79046465	Rat
70212	Niddm25	Non-insulin dependent diabetes mellitus QTL 25	3.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	38207390	136631402	Rat
1331801	Rf33	Renal function QTL 33	4.149		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	48523123	134369373	Rat
1598807	Glom12	Glomerulus QTL 12	2.7		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	5	38011670	83011670	Rat
1302786	Kidm8	Kidney mass QTL 8	28.15		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	5	38011670	83011670	Rat
1331782	Rf36	Renal function QTL 36	3.296		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	39019942	102105896	Rat
6903292	Stl28	Serum triglyceride level QTL 28	2.6	0.0073	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	5	33311673	78311673	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	51657967	166600247	Rat
1578767	Stresp17	Stress response QTL 17	4.3	0.01	blood aldosterone amount (VT:0005346)	plasma aldosterone level (CMO:0000551)	5	32751649	77751649	Rat
1576312	Emca8	Estrogen-induced mammary cancer QTL 8	4.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	55124766	172190305	Rat
1641912	Alcrsp18	Alcohol response QTL 18			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	5	39985948	84985948	Rat
1576314	Eutr1	Estrogen induced uterine response QTL 1			uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	6922282	81330203	Rat
6903306	Scl35	Serum cholesterol QTL 35	2.6	0.0073	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	33311673	78311673	Rat
1576317	Eutr2	Estrogen induced uterine response QTL 2		0.01	uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	39526924	84526924	Rat
1331773	Scl26	Serum cholesterol level QTL 26	3.065		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	48523123	91770353	Rat
70189	Mcs5	Mammary carcinoma susceptibility QTL 5	10.51		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	60601597	137492949	Rat
1331771	Rf35	Renal function QTL 35	4.36965		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	10019064	91770353	Rat
61359	Eaex	Experimental allergic encephalomyelitis QTL x	3		nervous system integrity trait (VT:0010566)	post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)	5	60511627	105511627	Rat
8662454	Vetf3	Vascular elastic tissue fragility QTL 3	27.4		artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	5	7065535	74335773	Rat
2290448	Scl54	Serum cholesterol level QTL 54	2.93		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	36460764	136631402	Rat
61426	Scl2	Serum cholesterol level QTL 2	7.3	0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	64589016	109589016	Rat
1331756	Rf34	Renal function QTL 34	4.16275		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	10019064	87027358	Rat
8552954	Pigfal14	Plasma insulin-like growth factor 1 level QTL 14	9		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	26023211	71023211	Rat
2316954	Rf57	Renal function QTL 57	0		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	5	64589016	93503770	Rat
2316959	Gluco59	Glucose level QTL 59	4.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	56546393	101546393	Rat
1600358	Mamtr5	Mammary tumor resistance QTL 5			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	23671493	68671493	Rat
2316957	Pur21	Proteinuria QTL 21	6.2		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	5	64589016	91762830	Rat

Markers in Region

RH133986

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	60,076,472 - 60,076,681 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	61,395,452 - 61,395,660	NCBI	Rnor6.0
Rnor_5.0	5	65,911,708 - 65,911,916	UniSTS	Rnor5.0
RGSC_v3.4	5	62,324,369 - 62,324,577	UniSTS	RGSC3.4
Celera	5	58,641,049 - 58,641,257	UniSTS
RH 3.4 Map	5	387.1	UniSTS
Cytogenetic Map	5	q22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
13	4	49	130	55	58	27	26	27	176	87	1	120	46	75	31	10	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC133299	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC158647	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473962	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000015270 ⟹ ENSRNOP00000015270

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	64,872,057 - 64,887,461 (-)	Ensembl
mRatBN7.2 Ensembl	5	60,076,429 - 60,091,833 (-)	Ensembl
Rnor_6.0 Ensembl	5	61,395,408 - 61,410,812 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000103296 ⟹ ENSRNOP00000084230

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	60,076,464 - 60,091,833 (-)	Ensembl

RefSeq Acc Id:

NM_001108972 ⟹ NP_001102442

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	64,872,056 - 64,887,461 (-)	NCBI
mRatBN7.2	5	60,076,428 - 60,091,833 (-)	NCBI
Rnor_6.0	5	61,395,407 - 61,410,812 (-)	NCBI
Rnor_5.0	5	65,911,663 - 65,927,068 (-)	NCBI
RGSC_v3.4	5	62,324,324 - 62,339,729 (-)	RGD
Celera	5	58,641,004 - 58,656,411 (-)	RGD

Sequence:

show sequence

GTTGTTCTGGAGTCTTCTCGGCAGTTCCATGAGCCGGTAGGGCCGCGCTAGTCCCGGGCCGAGG
GGCGCCCCGCGGTGCGGGCCGGGCCAATCAGCGGGCGCGGGGCGGGCGCGGTGGCTTTGCACGC
ACCAAGCGCTAAGCGGAGCAGAGGCGCTGCTGCGGTCCGTCTGGGAGCCGGCCATGCCGCGCCT
GCTGCTGCTGCTTCTGCTCCTGCCGTCACTGGCCTGGGGCCTCGGGCTCCGCGACGCGGGTAGA
CGACACCCCGAGTGCAGCCCGTGCCAGCCAGATCGCTGCCCTGCGCCTACGCCTTGCCCAGCGC
CCTGGATCTCCGCGCGCGACGAGTGCGGCTGCTGCGCGCGCTGCCTGGGCGCCGAGGGCGCGGG
TTGCGGGGGAAGGGTGGGCGCACGCTGCGGCCCTGGCCTGGTGTGTGCGAGTCGCGCCTCGGAG
ACGGCTCCCGAGGGCACCGGGCTCTGCGTGTGTGCGCAACGCGGAGCCGTCTGCGGTTCCGACG
GCCGCTCCTACTCCAGCATCTGCGCGCTACGTCTGCGCGCCCGACTTGGAACCCGCGCGCACCA
CGGCCATCTGCACAAGGTTCGCGATGGGCCCTGCGAGTTCGCTCCTGTGGTCCTCATGCCCCCT
CGAGATATTCACAATGTCACTGGCACTCAAGTATTTCTTTCCTGTGAGGTGAAGGCTGTGCCCA
CCCCGGTCATCACCTGGAAGAAGGTCAAGCACTCTCCAGAGGGCACTGAGGGGTTGGAGGAGTT
GCCTGGAGACCACGTCAATATAGCTGTCCAGGTGCGAGGGGGCCCTTCTGACCACGAGACCACA
TCCTGGATTTTGATCAACCCTCTGAGAAAGGAAGATGAGGGAGTGTACCACTGTCACGCAGCCA
ATGCCATCGGAGAGGCTCAGTCCCACGGCACGGTGACAGTCCTCGATCTGAACAGATACAAAAG
CCTCTACTCCTCGGTTCCGGGTGACCTCCTGTGATGAACATGGCTTCCAGAGACACTGGTCACA
GAACAGCGGCTGTCAAGGAGTGGATCGTTTTACGCTGTGAAAATCTAGGGAAATTGCCTGTAGA
TGGCTGCTTTTTGTATGTTTGTTTTTAAGGAATGCAAACTAGATTCATATGCAGATGTAGTTTT
TAGCAGGGCAGACCTTAGGGGGATGGGGGAAATGTGCATGCAGGTTTTTTACACTTTTGGAATG
ACTCGTTTTAAAAACAATTCTTTTTCTAACTCTTCTGTCCCAAGAAAGGCCACACACTGTACGT
TTGTAATTCTAAAGGGCTCAAAACAAGGCACTTGCCGTCTGACTCGTGAAAAAAAAAAAAAAAA
AAAAAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001102442	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI58648	(Get FASTA)	NCBI Sequence Viewer
	EDL98823	(Get FASTA)	NCBI Sequence Viewer
	EDL98824	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000015270
	ENSRNOP00000015270.3

RefSeq Acc Id:	NP_001102442 ⟸ NM_001108972
- Peptide Label:	precursor
- UniProtKB:	B0BN16 (UniProtKB/TrEMBL), F7F674 (UniProtKB/TrEMBL), A0A8I5ZYQ4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPRLLLLLLLLPSLAWGLGLRDAGRRHPECSPCQPDRCPAPTPCPAPWISARDECGCCARCLGA EGAGCGGRVGARCGPGLVCASRASETAPEGTGLCVCAQRGAVCGSDGRSYSSICALRLRARLGT RAHHGHLHKVRDGPCEFAPVVLMPPRDIHNVTGTQVFLSCEVKAVPTPVITWKKVKHSPEGTEG LEELPGDHVNIAVQVRGGPSDHETTSWILINPLRKEDEGVYHCHAANAIGEAQSHGTVTVLDLN RYKSLYSSVPGDLL hide sequence

Ensembl Acc Id:

ENSRNOP00000015270 ⟸ ENSRNOT00000015270

Ensembl Acc Id:

ENSRNOP00000084230 ⟸ ENSRNOT00000103296

Protein Domains

Ig-like IGFBP N-terminal Kazal-like

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B0BN16-F1-model_v2	AlphaFold	B0BN16	1-270	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1305656	AgrOrtholog
BioCyc Gene	G2FUF-41435	BioCyc
Ensembl Genes	ENSRNOG00000011320	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000015270	ENTREZGENE
	ENSRNOT00000015270.6	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
	3.30.60.30	UniProtKB/TrEMBL
	4.10.40.20	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:8364465	IMAGE-MGC_LOAD
InterPro	Growth_fac_rcpt_N_dom	UniProtKB/TrEMBL
	Ig-like	UniProtKB/TrEMBL
	Ig-like_dom_sf	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Ig_I-set	UniProtKB/TrEMBL
	Ig_sub	UniProtKB/TrEMBL
	Ig_sub2	UniProtKB/TrEMBL
	IGFBP-like	UniProtKB/TrEMBL
	IGFBP_rP_mac25	UniProtKB/TrEMBL
	Kazal_dom_sf	UniProtKB/TrEMBL
	Prot_inh_Kazal	UniProtKB/TrEMBL
KEGG Report	rno:366366	UniProtKB/TrEMBL
MGC_CLONE	MGC:187600	IMAGE-MGC_LOAD
NCBI Gene	366366	ENTREZGENE
PANTHER	IGFBP_rP_mac25	UniProtKB/TrEMBL
	INSULIN-LIKE GROWTH FACTOR-BINDING PROTEIN-LIKE 1	UniProtKB/TrEMBL
Pfam	I-set	UniProtKB/TrEMBL
	IGFBP	UniProtKB/TrEMBL
	Kazal_2	UniProtKB/TrEMBL
PhenoGen	Igfbpl1	PhenoGen
PIRSF	IGFBP_rP_mac25	UniProtKB/TrEMBL
PROSITE	IG_LIKE	UniProtKB/TrEMBL
	IGFBP_N_2	UniProtKB/TrEMBL
	KAZAL_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000011320	RatGTEx
SMART	IGc2	UniProtKB/TrEMBL
	KAZAL	UniProtKB/TrEMBL
	SM00121	UniProtKB/TrEMBL
	SM00409	UniProtKB/TrEMBL
Superfamily-SCOP	SSF100895	UniProtKB/TrEMBL
	SSF48726	UniProtKB/TrEMBL
	SSF57184	UniProtKB/TrEMBL
UniProt	A0A8I5ZYQ4	ENTREZGENE
	B0BN16	ENTREZGENE, UniProtKB/TrEMBL
	F7F674	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Igfbpl1	insulin-like growth factor binding protein-like 1	Igfbpl1_predicted	insulin-like growth factor binding protein-like 1 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Igfbpl1_predicted	insulin-like growth factor binding protein-like 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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