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Gene: Mgat4a (alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A) Rattus norvegicus

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Symbol:

Mgat4a

Name:

alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A

RGD ID:

1305650

Description:

Predicted to enable alanine-glyoxylate transaminase activity; alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity; and protein homodimerization activity. Predicted to be involved in N-glycan processing; glyoxylate metabolic process; and protein glycosylation. Predicted to be located in peroxisome. Predicted to be active in Golgi stack; endoplasmic reticulum; and endoplasmic reticulum-Golgi intermediate compartment. Orthologous to human MGAT4A (alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A); PARTICIPATES IN N-linked glycan biosynthetic pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; amphetamine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

glcNAc-T IVa; gnT-IVa; LOC367252; mannoside acetylglucosaminyltransferase 4, isoenzyme A; mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A; N-acetylglucosaminyltransferase IVa; N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase IVa; UDP-N-acetylglucosamine: alpha-1,3-D-mannoside beta-1,4-N-acetylglucosaminyltransferase IVa

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Related Pseudogenes:

Mgat4a-ps1

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	47,169,229 - 47,282,577 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	47,169,232 - 47,282,574 (-)	Ensembl				GRCr8
mRatBN7.2	9	39,673,427 - 39,786,747 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	39,673,430 - 39,766,890 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	48,169,491 - 48,262,980 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	53,292,241 - 53,385,733 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	51,574,110 - 51,667,584 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	44,033,433 - 44,126,946 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	44,033,436 - 44,126,919 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	43,734,661 - 43,847,624 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	36,384,072 - 36,477,938 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	37,427,682 - 37,516,621 (-)	NCBI		Celera
RGSC_v3.1	9	36,390,707 - 36,474,910 (-)	NCBI
Cytogenetic Map	9	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

COVID-19 (ISO)

pancreatic cancer (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (EXP)

17beta-estradiol (ISO)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4-hydroxyphenyl retinamide (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

amiodarone (ISO)

amphetamine (EXP)

antirheumatic drug (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP)

Butylbenzyl phthalate (ISO)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

cobalt dichloride (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

dicrotophos (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

epoxiconazole (ISO)

flutamide (EXP)

FR900359 (ISO)

furan (EXP)

GSK-J4 (ISO)

lead(0) (ISO)

lipopolysaccharide (ISO)

methapyrilene (ISO)

methoxychlor (EXP)

methylmercury chloride (ISO)

N-nitrosodiethylamine (ISO)

nickel atom (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

paraquat (EXP)

phenylmercury acetate (ISO)

potassium chromate (ISO)

propanal (ISO)

resveratrol (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

SB 431542 (ISO)

sodium arsenite (EXP,ISO)

succimer (ISO)

sunitinib (ISO)

thioacetamide (EXP)

tributylstannane (ISO)

trichostatin A (ISO)

triphenyl phosphate (ISO)

triptonide (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vincristine (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

glycoprotein biosynthetic process (ISO)

glyoxylate metabolic process (ISS)

N-glycan processing (ISO,ISS)

protein N-linked glycosylation (IBA,ISO)

Cellular Component

endoplasmic reticulum (IBA)

endoplasmic reticulum-Golgi intermediate compartment (IBA)

extracellular region (IEA)

Golgi membrane (IEA)

Golgi stack (IBA)

peroxisome (ISS)

Molecular Function

acetylglucosaminyltransferase activity (IBA,IEA,ISO)

alanine-glyoxylate transaminase activity (ISS)

alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity (IEA,ISO,ISS)

glycosyltransferase activity (IEA,ISO)

metal ion binding (IEA)

protein homodimerization activity (ISS)

transferase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

N-linked glycan biosynthetic pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Aberrant expression of N-acetylglucosaminyltransferase-IVa and IVb (GnT-IVa and b) in pancreatic cancer.	Ide Y, etal., Biochem Biophys Res Commun. 2006 Mar 10;341(2):478-82. Epub 2006 Jan 11.
4.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
5.	GOA pipeline	RGD automated data pipeline
6.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
8.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:8889548	PMID:12477932	PMID:19199708	PMID:20015870	PMID:24619415	PMID:37962815

Genomics

Comparative Map Data

Mgat4a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	47,169,229 - 47,282,577 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	47,169,232 - 47,282,574 (-)	Ensembl				GRCr8
mRatBN7.2	9	39,673,427 - 39,786,747 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	39,673,430 - 39,766,890 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	48,169,491 - 48,262,980 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	53,292,241 - 53,385,733 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	51,574,110 - 51,667,584 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	44,033,433 - 44,126,946 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	44,033,436 - 44,126,919 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	43,734,661 - 43,847,624 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	36,384,072 - 36,477,938 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	37,427,682 - 37,516,621 (-)	NCBI		Celera
RGSC_v3.1	9	36,390,707 - 36,474,910 (-)	NCBI
Cytogenetic Map	9	q21	NCBI

MGAT4A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	98,619,106 - 98,731,132 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	98,619,106 - 98,732,639 (-)	Ensembl			hg38	GRCh38
GRCh37	2	99,235,569 - 99,347,595 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	98,602,001 - 98,714,021 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	2	98,700,174 - 98,801,448	NCBI
Celera	2	93,439,294 - 93,552,735 (-)	NCBI		Celera
Cytogenetic Map	2	q11.2	NCBI
HuRef	2	93,000,157 - 93,109,090 (-)	NCBI		HuRef
CHM1_1	2	99,239,892 - 99,347,374 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	99,077,498 - 99,189,568 (-)	NCBI		T2T-CHM13v2.0

Mgat4a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	37,478,421 - 37,580,599 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	37,478,421 - 37,580,097 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	37,439,340 - 37,541,060 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	37,439,340 - 37,541,016 (-)	Ensembl			mm10	GRCm38
MGSCv37	1	37,496,185 - 37,593,104 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	37,389,102 - 37,480,678 (-)	NCBI		MGSCv36	mm8
Celera	1	37,221,146 - 37,318,376 (-)	NCBI		Celera
Cytogenetic Map	1	B	NCBI
cM Map	1	15.46	NCBI

Mgat4a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955470	5,065,656 - 5,189,060 (-)	Ensembl
ChiLan1.0	NW_004955470	5,060,457 - 5,189,021 (-)	NCBI	ChiLan1.0	ChiLan1.0

MGAT4A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	29,705,970 - 29,825,506 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	29,708,732 - 29,828,268 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	100,573,320 - 100,692,840 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	99,527,418 - 99,641,579 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	99,533,831 - 99,641,579 (-)	Ensembl			panPan2	panpan1.1

MGAT4A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	43,931,642 - 44,057,156 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	43,931,673 - 44,080,347 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	43,852,998 - 43,979,153 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	44,803,200 - 44,929,672 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	44,803,793 - 44,954,046 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	44,513,960 - 44,640,091 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	44,804,708 - 44,926,859 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	44,980,550 - 45,106,776 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Mgat4a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	84,457,430 - 84,530,413 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936744	1,715,898 - 1,765,879 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936744	1,710,392 - 1,783,356 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MGAT4A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	55,560,118 - 55,666,193 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	3	55,560,076 - 55,667,221 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	58,112,175 - 58,214,742 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MGAT4A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	2,339,509 - 2,457,872 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	2,340,567 - 2,453,853 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666041	169,859,318 - 169,987,907 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mgat4a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624749	3,661,108 - 3,775,609 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624749	3,656,181 - 3,775,619 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Mgat4a
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	4	113,641,554 - 113,730,812 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Mgat4a
1170 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	1482
Count of miRNA genes:	357
Interacting mature miRNAs:	513
Transcripts:	ENSRNOT00000024701
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2303170	Bp332	Blood pressure QTL 332	3.73	0.027	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	6714888	84474983	Rat
631211	Bw4	Body weight QTL4	5.31		retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	9	5346479	50346479	Rat
7411571	Bw138	Body weight QTL 138	14.3	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	9	40029925	85029925	Rat
2303559	Gluco54	Glucose level QTL 54	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	9	8750492	53750492	Rat
1300180	Bw14	Body weight QTL 14	3.776		body mass (VT:0001259)	body weight (CMO:0000012)	9	31250432	68875676	Rat
8662828	Vetf6	Vascular elastic tissue fragility QTL 6	3.9		artery integrity trait (VT:0010639)	patent ductus arteriosus score (CMO:0002566)	9	44458256	99506504	Rat
61450	Ciaa3	CIA Autoantibody QTL 3	6.5		blood autoantibody amount (VT:0003725)	calculated serum anti-type 2 collagen antibody titer (CMO:0001279)	9	29567664	74567664	Rat
1598834	Memor11	Memory QTL 11	2.5		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	9	44458256	85262605	Rat
70186	Niddm26	Non-insulin dependent diabetes mellitus QTL 26	3.87		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	9	29567664	83835942	Rat
70218	Cm28	Cardiac mass QTL 28	8.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	9	41720295	86720295	Rat
1641911	Alcrsp13	Alcohol response QTL 13			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	6214995	51214995	Rat
1354650	Despr5	Despair related QTL 5	4.01	0.0017	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	9	8750492	53750492	Rat
2290450	Scl57	Serum cholesterol level QTL 57	4.15		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	9	44458256	121768150	Rat
7207805	Bmd88	Bone mineral density QTL 88	4		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	9	31250432	65651574	Rat
61425	Cia15	Collagen induced arthritis QTL 15	4.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	9	5346479	50416711	Rat
1581517	Bp284	Blood pressure QTL 284			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	39220186	84220186	Rat
1600365	Mcs20	Mammary carcinoma susceptibility QTL 20	3		mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	9	21031430	49025574	Rat
7411656	Foco26	Food consumption QTL 26	9.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	40029925	85029925	Rat
1298088	Edpm11	Estrogen-dependent pituitary mass QTL 11	2.5		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	9	6214995	51214995	Rat
1641894	Alcrsp12	Alcohol response QTL 12			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	34960590	79960590	Rat
1598823	Memor16	Memory QTL 16	1.9		exploratory behavior trait (VT:0010471)	difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	9	31456061	57460683	Rat

Markers in Region

RH127394

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_5.0	1	121,362,714 - 121,362,926	NCBI	Rnor5.0
Rnor_5.0	9	43,734,762 - 43,734,974	NCBI	Rnor5.0
Rnor_5.0	1	121,126,705 - 121,126,917	NCBI	Rnor5.0
RGSC_v3.4	9	36,384,174 - 36,384,385	UniSTS	RGSC3.4
RGSC_v3.4	1	114,399,573 - 114,399,784	UniSTS	RGSC3.4
Celera	9	37,427,784 - 37,427,995	UniSTS
Celera	1	106,037,082 - 106,037,293	UniSTS
Cytogenetic Map	9	q21	UniSTS

UniSTS:546862

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	113,862,738 - 113,863,632 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	120,228,785 - 120,229,678	NCBI	Rnor6.0
Rnor_6.0	1	119,993,021 - 119,993,914	NCBI	Rnor6.0
Rnor_5.0	1	121,132,017 - 121,132,910	UniSTS	Rnor5.0
Rnor_5.0	1	121,368,025 - 121,368,918	UniSTS	Rnor5.0
Celera	1	106,042,391 - 106,043,284	UniSTS
Cytogenetic Map	9	q21	UniSTS
Cytogenetic Map	1	q22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001012225	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001160155	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244840	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596573	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083971	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267509	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC133270	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC088215	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BM388934	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CV115746	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000024701 ⟹ ENSRNOP00000024701

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	47,169,232 - 47,262,713 (-)	Ensembl
mRatBN7.2 Ensembl	9	39,673,430 - 39,766,890 (-)	Ensembl
Rnor_6.0 Ensembl	9	44,033,436 - 44,126,919 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000097529 ⟹ ENSRNOP00000095476

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	47,169,232 - 47,262,713 (-)	Ensembl
mRatBN7.2 Ensembl	9	39,673,430 - 39,766,890 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000138713 ⟹ ENSRNOP00000101140

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	47,169,232 - 47,282,574 (-)	Ensembl

RefSeq Acc Id:

NM_001012225 ⟹ NP_001012225

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	47,169,229 - 47,262,713 (-)	NCBI
mRatBN7.2	9	39,673,427 - 39,766,890 (-)	NCBI
Rnor_6.0	9	44,033,433 - 44,126,919 (-)	NCBI
Rnor_5.0	9	43,734,661 - 43,847,624 (-)	NCBI
RGSC_v3.4	9	36,384,072 - 36,477,938 (-)	RGD
Celera	9	37,427,682 - 37,516,621 (-)	RGD

Sequence:

show sequence

GCTCCAGCTGCGTCGCCGGCGGCCGCGGTAGAAGCGCCCTGGCCCGCGGCAGAAAGAAGAAAAA
GAAACAGCAGCCCTTAGCCCTCAGCCTCTGAAAACCTCGAAGACAATCTGGAATAGCAATACCC
ACGCTTGCTTTGCTGCTTGACACCTTCTGCCCAGCATCTGAAGTGAACCTCAATCATCAATTGC
TTTGTTTTTGGCCCAGGTCCAAGGCGTTCTGCCTTCTGTTGACTTGAGGCTGGAGAGAGACTGG
TCTTGCTTGCTGTTGCCAACTTGTGAACCAGTGTGATGGTGAAATGAGATGAGGCTCCGAAATG
GAACTGTGGCCACTGCGCTGGTGTTTGTCACGTCCTTCCTTACCCTGTCCTGGTATACCACATG
GCAAAATGGGAAAGAAAAATTAATTGCTTACCAACGAGAATTCCTCGCTTTAAAAGAACGTCTT
CGAGTGGCCGAACATAGGATATCTCAGCGCTCCTCTGAGCTAAACACCATTGTCCAACAGTTCC
GCCGAGCTGGAGCGGAGACTAATGGAAATAATACCATAAAGCTTCTAAAAGAGTTGACAAGCAA
AAAATCACTTCAAGTGCCAAGTATTTATTATCATTTGCCTCATCTATTGCAAAATGAAAGAAGC
CTTCAGCCCGCCGTACAGATTGGCAGTGGAAGAACGGGAGTTTCAATAGTCATGGGGATTCCTA
CTGTGAAGAGAGAAGTTAAATCTTACCTCATAGAGACCCTTCACTCCCTTATTGATAATCTGTA
TCCTGAAGAGAAGCTGGACTGTGTTATAGTTGTCTTCATAGGAGAGACAGATCTTGATTATGTT
CACAGCGTTGTTGCCAACCTGGAGAAAGAATTTTCTAGAGAAATTAGTTCCGGCTTGCTAGAAG
TAATCTCTCCTCCTGAAAGCTATTACCCCGACTTAACAAACCTGAAGGAGACGTTCGGAGACTC
CAAGGAAAGAGTAAGATGGAGAACGAAGCAAAACCTGGACTATTGTTTTCTGATGATGTATGCT
CAGGAGAAGGGCATTTACTACATTCAGCTTGAAGATGATATTATTGTCAAGCAAAACTATTTTA
ATACCATAAAAAATTTTGCACTTCAACTTTCTTCTGAAGAATGGATGATTCTAGAGTTTTCCCA
GCTGGGCTTCATTGGGAAGATGTTCCAGGCGCCGGACCTAGCTCTGGTTGTGGAGTTCATTCTC
ATGTTCTATAAGGAGAAGCCCATTGACTGGCTCTTGGACCACATTCTCTGGGTGAAGGTCTGCA
ACCCCGAAAAAGATGCCAAACACTGCGACAGACAGAAGGCAAACCTACGAATCCGCTTCCGACC
CTCCCTCTTCCAGCACGTGGGTCTACACTCATCTCTGTCGGGGAAAATTCAGAAACTTACGGAT
AAAGATTACATGAAACCATTGCTTCTCAAGATCCACGTGAACCCGCCTGCAGAGGTCTCCACTT
CCCTGAAGGTGTACCAAGGGCACACACTGGAGAAGACCTACATGGGGGAAGACTTCTTTTGGGC
CATCACCCCCACAGCTGGAGACTACATCTTGTTTAAATTTGATAAACCGGTCAATGTGGAGAGT
TATTTGTTCCACAGCGGCAATCAAGAGCACCCAGGGGACATCCTGCTGAACACGACCGTGGAGG
TTCTGCCTCTTAAGAGCGACAGTTTGGAGATCAGCAAAGAAACCAAAGACAAACGATTAGAAGA
TGGCTATTTCAGAATAGGGAAATTTGAGTACGGAGTTGCAGAGGGAATTGTGGATCCTGGACTG
AACCCTATCTCAGCCTTTCGACTGTCGGTTATTCAGAACTCTGCTGTCTGGGCCATTCTCAATG
AGATTCATATTAAGAAAGTCACCAGTTGATCTGCTTAGAAACCAACACGTCCTTTCTTGTGACT
CTTGATTAAAGATACTGAGCACGCCGTCCTCTTCTGCTCTGACTTGAACACTACCTCTCGTGAA
GCCTACTGTAGATAAGATGATTACCATCTCCACTTGGGCAGGGACCCTTCCCACCGACAACTGC
ATTCATTTGAAACGAGGCTGTCCTCCAAATTTGAACTTGACACAAACATTTTACAATTCTGACA
GCCTGGTAACACGCCTGAGACTATTTTGGTATTATACTAATACACAAGAGTTGTACATATTGTT
ACATTCCTTAAAATTTGAGAAAACTGATGTTAAATACATTTTGTGAAGGGGGTACTTTTGAAGT
TCACTTATTTTACTATTATAGACCCTCTTTTATAGACGATCAGGGATGTTATATATATATAAAT
ATAAATATATAAATACACATGAAGATGTTATGAAGTTAATTTATTAGAAGTACTTAAGAAGTAC
ATATTTTTGTGCAGTAAAGTTTTGAATCAACACCTTTTTTTGAAGAAGCGGTTCCTGGCTTTTT
TAAGTTCCTTCTATATTTTTATTTGTAGATGCAGACATTCTAGATCAACGCCATTTTTTTCCAG
TGCACTGCCATTCCAGATTGGTTCTAGATGGGTTTCTTAACTTGAAGTACTTTTATAATCACAG
CAATTCTGAACAAAATATTTTCAGAGGCATTTGTCATTCCTAAAAAAACAATCAAGATTTTAAA
AGACCAGAGCCCTCTGGAGGGTTATATTACTGTACTGTGTGTGGTGTGTAGCCACAGAAACCCG
TGTGATTGTCAGTGTCGGGTGGGAGGCCCTGCCTCGTCTCCATACACTCCTTCACCCCCTCATA
GTTCCCTCCATGTGGGTGACGAGACTCCTTTCCCTTTTGCTCTGTCTTTAATCAGTAGTTAGAC
ACACTGTCTTCTTTTCTCCCTGGTCCTTTTATAGACCTGTGGTGGGTTTTGACGTTCAGATAAT
GTTTCCTGGGTAATGCTGTTGGATGAGTCATATTGGGTATAATTTTACAACCAACATTGTTATG
TGGGGCTCTGGTGAAAGACAACCGTAGCGCTTCTAGGTTTCCACAGCATGTTTGCTCTGCTATG
TCCTGAATGCAAGGGTGAACGCGTGTGCAGTCCCAAGAAGGGCTAGTTGGCAAACGTGCTTTAC
TCTTACACTTAGGAAGGCCGGGCAAGTTGCCAGTCTTCTCTGGCTCTCCAGGAGCTGCGCATGC
CCAGCAGGTGTGGGGGCCTAGGTGTGGAAGTTCCCAGCTGGTGGCCTCCACCCTGGAACTTTCT
CAGTTGCCCAGTGTATGGAACACAGTACAAAGCAGCAGCCATTTTGTATGTTCTGACTGGGGAA
ACGTAGATAAACACTACTGTGCATGTCAAAGCCCAGCTGAAGCTTTTCTTGGTGTTTTGTAAAC
TTTGTAAACATGGTGTTTTATTCAAGTTTTTAATTTCTTCTCTGATTTCCTTTGCCCTGTGCCC
ACAAGCACATCCTTAGAAAATTTAAGCACTATCTTCCCACACTCAAGTGTGCAGCAGGGTAACA
GACTGAAACCATGCGGATGGATGCAGGGGCCCTTTTAGGTCTCTGCTTTCTCAGTGGCTGCAAG
TTCAGAGCTTTGAAAATCCAGTGGGTCACTTGACTGTCTCCTGCGTGGGTCTTTGAGCTGTCCT
CCCGCCAGGCTCCTCTCATTTGTCTTGCCTGTAGGGACTCTTAGCCAAGTCCTTTCCTTCATTC
CAGGAATCCCTTTTCCCTTTGTGCGCTTACTCCCAGTGCCTAGAACATGCCTGAGCCTCGGCAG
GTTCTTTTAGCATCTGGATGAGTGGATTAACTAGCCAGGTTGCTCACATCTCTCTCCGAGCACT
ATTTGCCTGCTATCTTGTCATGCATGGGCACACACACTCCGTGTCTAGTCTTCATTCTGTGTGG
TGTGTGTTCTCCAACACACTCCGAGCTCTGGAGGCCAGCTCTCCTGTCTTCCACGTCAGGTGCT
CATTTGATCCATCAGTGTTAGTTGCTCTCACTTTTGTGCCCAGTTCAGCACTAGACTATCAGAA
ACAGTTTGGTTGGCCCAAGCAAGATTTTTGTGGGAGCCCTGGAGATTTGTGAAGGTAAAGACTA
GAGGAGGTGAAGCCAGAGTACTTAGAACTGCAAGGTGTCCACCTTGTGGGCAACCAACGGACCT
TCACCCACAGTGAATGGGAAAAGTGCCAAATACAGTACCAATTATTTCTGTGAAGTAGATGGTG
GTTGGTACCAGTGTATTTCAGATACTCCAGACTCTAGAGTGGTGCTGGCCTCTACAGAAGCCAC
ACATCTGTTGAAATGAAATGTTGAGTTCTGTGCCCATGTTGGCAGCATTTGGAGTGGTCAGCGG
CCACATGGCCAGCAGCCACCATATTGGATCCCAGAAATATGGGACACTGACATCATGGTTCTGC
TGGTCATAAATATAAGCATTCTAGAAAGGAGTGATGCATCCTGCTGCTGTGATTAAAAGTAGAC
CTATGGATTCATGGTAGTACAGGTGAAGGTGTGTATTTTGATGGGACGGCCAAAATTGCCTGGC
TACATGTTAGCATTATGATTCTTCCCAGCATGCATTGTTTCAGTGTCCCCAAGAGGTACATTTG
AAAAGCATGAGAAGTGAATACAGGTGGATGATTTAGTTTGTAGCCTAGATGTGTGTTATGTCCG
TCAGAGTGTGTTTGAACAAATGTCATTGGTTACATGCAAAAGATTATTTCAAAAGCTGTCAGGA
AAAGTTGAGAGATTAGAGTTCTTTTTAGTCTTTCAGAATTACAAGAACTATAGTTCTCAACAGT
GCTGTCTCTCAAGGAAGTTTGCTTATGTGGAAAGAGGTGTTGTTAGCAAAGGTTTTTCCAGTTA
ATAAGTGTGTATCTGTCATATGCAGGATTCTAAGAATGACCCCTCCCATGACTTTGTATAATAT
CCTCCTCCCCTTCTGAGTATAGCGACAACTGTGACCATGTCATGTCTTGTTACTTAACAAAAGG
GAGATTACCTGTCAGTGGCTGATCCAATGTTGAGAGTCATGTCAGGCTGGTACAAGTGAGAGAC
AGCAGCAGTAGAACTCTGAACAGCATTGCTGGGCCTGCCTTAAGGAGCCAGAGGCTTTGTTACC
CACTGAGTGGGAGCTGCAGACCTTTTGCCACAGGACCATTTGACCCAGACACTTAACCGGTTTG
GACATGGAAATGCTTGGGCGAGCAGTCAGCTGGGTAAACCTTCCCTGCAGCTTTGTAAGCGGGG
CCCTACCTAGGCTTCTGATGTGCAGCAGTGGGTAAGAAATTGGCAGTGCTGTACGTGGCTAGGT
TTGTGTTTTGTAAAAAGTAACAATCTCAGTCCTGAGAAGGCTTCATATGTGATTGCCTGCAGTG
ACTGGTTTTTAAGACAAGGTCTCATCTTGCACCCCAGGCTGGTTCTCCCAGTTCTGCCCCTCAA
GTGTCGATGTGCATCACCATGCCCAGTTGACTGATGGCTTTTGACATAAGAATAAACTTGTTCC
TAGCAAGCCCTATTCCTGGCTCTCTGCTAGGATGCTTGGTGCCAGGACCCGTCTCCACTACTAG
CCAGACTTGCGTTATTTTTTGTTGTGTAAAACTGGCAGGATGAAGCTGAAGGTGTGGGCTGTAG
GCATCTTCTCCTAGATACTCCTAAATTGTACTGACTTAAAGGCCTGCCGGAAGTAGGGGGAAGA
ATGAGGAACAGTATTTTAGATCAGATCAACAAGAAGAAAAATTCCCACCGTCATGTCGATTTGC
TGGTGTGTCCAACCTTCTGACAGTGCAGTGGGACACTGTTCTCTACAGAGTCCAGGCTCAAGAA
CCTCACGGTCCAGTTACAAAAACAACGAAACTGTTAAAAAGCTTTGAGTAAGTTTACAATTTTG
TATTGTGCCATTCATTGCTGTCCTGGGCCACAGGCTGAACATACCTGCAAGAGCTTCAGCTACG
ACAGCTGTAATTTTTAAAAGATCACTTAGCTGAGTAGCTCACGGGTCAAACCCTGTATGTTCCA
AGGTTTTGTATTTACATGTTTCCCAAAATACCATGCTTATTGTTGCTATTATTCAACCATGCTG
CTGTAGCCTTGAGGGAAATAAACAGAACTGAAGGAAAGGAACCCAGAGGTTAAACACTGTCGTC
ATCTTCGCATGGTGAGGGATCGAGTCCCAGTTCAAGACTTCAGGGAAGGGCATTCCCAAGCCAC
GTAGCAACATTTACGGCTTGTAAAACTTAAACTGTGATAGTTGTGAGGACTTAAATGATTAATA
TTAACATAGATGCTATGCTAATTAATATGCTAAATTTAATGCATGTGAACATATGATGCTACAA
AGATGACCACAGTCTTTACAAAGAGCAAAAGAATAAAACCAACCAACCCACCCAAGGGTTTTGT
TACTCGTGCCCCTGTACTCTATCACTAGCTAAACAGACCTTTGTTGTTTCTGAAATGCTCCCTT
TTCCAGTTTCTGCACTACCTAAGGATGCAAGTGTGAGAGCAGACAGGCAGCAGGTGGCCCTGTG
TGAGCAGGGGCCGGAGAAGGACTGGAAGTGTCCGTGCAGGCACACAGGCGGCCACTGCGAGTGC
AGCGGGAACCCCTGGACTGCAGAGGGATTCTTGCTGCTCTCAACACATGTGTTGTGGGAACAGC
TAGGTACTTGTGATACTAAGGAGGCTGCTTCTTGAAGCTGCTCTGCTGCTGAGTTAGCAATTAT
CCCAAAATACAGAGTGGGGTCCTTTAGCTTGCGTAGCATTCCACCCTTTATTGGAAATGCTCCA
GCGCTGTGTAAGAGGACCTGAAGCGCATTCTCTTGAGCCTTACAAAGAGCTGCTGGGACAGTAC
TGTCCAGTCCACTAAGCTCACACCTCTTTCCCCCAGTGGAGTCAAAGACGCTCAGTTGGTGCAC
GTCCTCCACAAGGCTGTCTTCACACTGGGGGACGTTCTGGAGTCTTGCTAGGTTGTACCAGGTC
CTCTTTTCCTCTGCTCACAATGTCTTTATGGGTTGAACATTAACTGCAGTAATATTTGAGGTAC
CTGTTGAATTTTTAAAGGCAGATTATTTATTTTTAAGTTTGCTGCTATAATCGAAACCTAATAA
TGTCCTGTTGACTGTGCCTTTCATAACTGTCTCTGTGCTACAACTGTCCATGTGTATTTGAAAT
AAAGATGTTTGAAAAGCTATGTTGAATCAAGATTCCTTCTAATAAAAATGGCTTAAACCAAAAA
AAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001160155 ⟹ NP_001153627

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	47,169,229 - 47,262,713 (-)	NCBI
mRatBN7.2	9	39,673,427 - 39,766,890 (-)	NCBI
Rnor_6.0	9	44,033,433 - 44,126,919 (-)	NCBI
Rnor_5.0	9	43,734,661 - 43,847,624 (-)	NCBI
RGSC_v3.4	9	36,384,072 - 36,477,938 (-)	RGD
Celera	9	37,427,682 - 37,516,621 (-)	RGD

Sequence:

show sequence

GCTCCAGCTGCGTCGCCGGCGGCCGCGGTAGAAGCGCCCTGGCCCGCGGCAGAAAGAAGAAAAA
GAAACAGCAGCCCTTAGCCCTCAGCCTCTGAAAACCTCGAAGACAATCTGGAATAGCAATACCC
ACGCTTGCTTTGCTGCTTGACACCTTCTGCCCAGCATCTGAAGTGAACCTCAATCATCAATTGC
TTTGTTTTTGGCCCAGGTCCAAGGCGTTCTGCCTTCTGTTGACTTGAGGCTGGAGAGAGACTGG
TCTTGCTTGCTGTTGCCAACTTGTGAACCAGTGTGATGGTGAAATGAGATGAGGCTCCGAAATG
GAACTGTGGCCACTGCGCTGGTGTTTGTCACGTCCTTCCTTACCCTGTCCTGGTATACCACATG
GCAAAATGGGAAAGAAAAATTAATTGCTTACCAACGAGAATTCCTCGCTTTAAAAGAACGTCTT
CGAGTGGCCGAACATAGGATATCTCAGCGCTCCTCTGAGCTAAACACCATTGTCCAACAGTTCC
GCCGAGCTGGAGCGGAGACTAATGGAAGTAAGGCTGGTCTGAGTACGTTCTCAGATAATACCAT
AAAGCTTCTAAAAGAGTTGACAAGCAAAAAATCACTTCAAGTGCCAAGTATTTATTATCATTTG
CCTCATCTATTGCAAAATGAAAGAAGCCTTCAGCCCGCCGTACAGATTGGCAGTGGAAGAACGG
GAGTTTCAATAGTCATGGGGATTCCTACTGTGAAGAGAGAAGTTAAATCTTACCTCATAGAGAC
CCTTCACTCCCTTATTGATAATCTGTATCCTGAAGAGAAGCTGGACTGTGTTATAGTTGTCTTC
ATAGGAGAGACAGATCTTGATTATGTTCACAGCGTTGTTGCCAACCTGGAGAAAGAATTTTCTA
GAGAAATTAGTTCCGGCTTGCTAGAAGTAATCTCTCCTCCTGAAAGCTATTACCCCGACTTAAC
AAACCTGAAGGAGACGTTCGGAGACTCCAAGGAAAGAGTAAGATGGAGAACGAAGCAAAACCTG
GACTATTGTTTTCTGATGATGTATGCTCAGGAGAAGGGCATTTACTACATTCAGCTTGAAGATG
ATATTATTGTCAAGCAAAACTATTTTAATACCATAAAAAATTTTGCACTTCAACTTTCTTCTGA
AGAATGGATGATTCTAGAGTTTTCCCAGCTGGGCTTCATTGGGAAGATGTTCCAGGCGCCGGAC
CTAGCTCTGGTTGTGGAGTTCATTCTCATGTTCTATAAGGAGAAGCCCATTGACTGGCTCTTGG
ACCACATTCTCTGGGTGAAGGTCTGCAACCCCGAAAAAGATGCCAAACACTGCGACAGACAGAA
GGCAAACCTACGAATCCGCTTCCGACCCTCCCTCTTCCAGCACGTGGGTCTACACTCATCTCTG
TCGGGGAAAATTCAGAAACTTACGGATAAAGATTACATGAAACCATTGCTTCTCAAGATCCACG
TGAACCCGCCTGCAGAGGTCTCCACTTCCCTGAAGGTGTACCAAGGGCACACACTGGAGAAGAC
CTACATGGGGGAAGACTTCTTTTGGGCCATCACCCCCACAGCTGGAGACTACATCTTGTTTAAA
TTTGATAAACCGGTCAATGTGGAGAGTTATTTGTTCCACAGCGGCAATCAAGAGCACCCAGGGG
ACATCCTGCTGAACACGACCGTGGAGGTTCTGCCTCTTAAGAGCGACAGTTTGGAGATCAGCAA
AGAAACCAAAGACAAACGATTAGAAGATGGCTATTTCAGAATAGGGAAATTTGAGTACGGAGTT
GCAGAGGGAATTGTGGATCCTGGACTGAACCCTATCTCAGCCTTTCGACTGTCGGTTATTCAGA
ACTCTGCTGTCTGGGCCATTCTCAATGAGATTCATATTAAGAAAGTCACCAGTTGATCTGCTTA
GAAACCAACACGTCCTTTCTTGTGACTCTTGATTAAAGATACTGAGCACGCCGTCCTCTTCTGC
TCTGACTTGAACACTACCTCTCGTGAAGCCTACTGTAGATAAGATGATTACCATCTCCACTTGG
GCAGGGACCCTTCCCACCGACAACTGCATTCATTTGAAACGAGGCTGTCCTCCAAATTTGAACT
TGACACAAACATTTTACAATTCTGACAGCCTGGTAACACGCCTGAGACTATTTTGGTATTATAC
TAATACACAAGAGTTGTACATATTGTTACATTCCTTAAAATTTGAGAAAACTGATGTTAAATAC
ATTTTGTGAAGGGGGTACTTTTGAAGTTCACTTATTTTACTATTATAGACCCTCTTTTATAGAC
GATCAGGGATGTTATATATATATAAATATAAATATATAAATACACATGAAGATGTTATGAAGTT
AATTTATTAGAAGTACTTAAGAAGTACATATTTTTGTGCAGTAAAGTTTTGAATCAACACCTTT
TTTTGAAGAAGCGGTTCCTGGCTTTTTTAAGTTCCTTCTATATTTTTATTTGTAGATGCAGACA
TTCTAGATCAACGCCATTTTTTTCCAGTGCACTGCCATTCCAGATTGGTTCTAGATGGGTTTCT
TAACTTGAAGTACTTTTATAATCACAGCAATTCTGAACAAAATATTTTCAGAGGCATTTGTCAT
TCCTAAAAAAACAATCAAGATTTTAAAAGACCAGAGCCCTCTGGAGGGTTATATTACTGTACTG
TGTGTGGTGTGTAGCCACAGAAACCCGTGTGATTGTCAGTGTCGGGTGGGAGGCCCTGCCTCGT
CTCCATACACTCCTTCACCCCCTCATAGTTCCCTCCATGTGGGTGACGAGACTCCTTTCCCTTT
TGCTCTGTCTTTAATCAGTAGTTAGACACACTGTCTTCTTTTCTCCCTGGTCCTTTTATAGACC
TGTGGTGGGTTTTGACGTTCAGATAATGTTTCCTGGGTAATGCTGTTGGATGAGTCATATTGGG
TATAATTTTACAACCAACATTGTTATGTGGGGCTCTGGTGAAAGACAACCGTAGCGCTTCTAGG
TTTCCACAGCATGTTTGCTCTGCTATGTCCTGAATGCAAGGGTGAACGCGTGTGCAGTCCCAAG
AAGGGCTAGTTGGCAAACGTGCTTTACTCTTACACTTAGGAAGGCCGGGCAAGTTGCCAGTCTT
CTCTGGCTCTCCAGGAGCTGCGCATGCCCAGCAGGTGTGGGGGCCTAGGTGTGGAAGTTCCCAG
CTGGTGGCCTCCACCCTGGAACTTTCTCAGTTGCCCAGTGTATGGAACACAGTACAAAGCAGCA
GCCATTTTGTATGTTCTGACTGGGGAAACGTAGATAAACACTACTGTGCATGTCAAAGCCCAGC
TGAAGCTTTTCTTGGTGTTTTGTAAACTTTGTAAACATGGTGTTTTATTCAAGTTTTTAATTTC
TTCTCTGATTTCCTTTGCCCTGTGCCCACAAGCACATCCTTAGAAAATTTAAGCACTATCTTCC
CACACTCAAGTGTGCAGCAGGGTAACAGACTGAAACCATGCGGATGGATGCAGGGGCCCTTTTA
GGTCTCTGCTTTCTCAGTGGCTGCAAGTTCAGAGCTTTGAAAATCCAGTGGGTCACTTGACTGT
CTCCTGCGTGGGTCTTTGAGCTGTCCTCCCGCCAGGCTCCTCTCATTTGTCTTGCCTGTAGGGA
CTCTTAGCCAAGTCCTTTCCTTCATTCCAGGAATCCCTTTTCCCTTTGTGCGCTTACTCCCAGT
GCCTAGAACATGCCTGAGCCTCGGCAGGTTCTTTTAGCATCTGGATGAGTGGATTAACTAGCCA
GGTTGCTCACATCTCTCTCCGAGCACTATTTGCCTGCTATCTTGTCATGCATGGGCACACACAC
TCCGTGTCTAGTCTTCATTCTGTGTGGTGTGTGTTCTCCAACACACTCCGAGCTCTGGAGGCCA
GCTCTCCTGTCTTCCACGTCAGGTGCTCATTTGATCCATCAGTGTTAGTTGCTCTCACTTTTGT
GCCCAGTTCAGCACTAGACTATCAGAAACAGTTTGGTTGGCCCAAGCAAGATTTTTGTGGGAGC
CCTGGAGATTTGTGAAGGTAAAGACTAGAGGAGGTGAAGCCAGAGTACTTAGAACTGCAAGGTG
TCCACCTTGTGGGCAACCAACGGACCTTCACCCACAGTGAATGGGAAAAGTGCCAAATACAGTA
CCAATTATTTCTGTGAAGTAGATGGTGGTTGGTACCAGTGTATTTCAGATACTCCAGACTCTAG
AGTGGTGCTGGCCTCTACAGAAGCCACACATCTGTTGAAATGAAATGTTGAGTTCTGTGCCCAT
GTTGGCAGCATTTGGAGTGGTCAGCGGCCACATGGCCAGCAGCCACCATATTGGATCCCAGAAA
TATGGGACACTGACATCATGGTTCTGCTGGTCATAAATATAAGCATTCTAGAAAGGAGTGATGC
ATCCTGCTGCTGTGATTAAAAGTAGACCTATGGATTCATGGTAGTACAGGTGAAGGTGTGTATT
TTGATGGGACGGCCAAAATTGCCTGGCTACATGTTAGCATTATGATTCTTCCCAGCATGCATTG
TTTCAGTGTCCCCAAGAGGTACATTTGAAAAGCATGAGAAGTGAATACAGGTGGATGATTTAGT
TTGTAGCCTAGATGTGTGTTATGTCCGTCAGAGTGTGTTTGAACAAATGTCATTGGTTACATGC
AAAAGATTATTTCAAAAGCTGTCAGGAAAAGTTGAGAGATTAGAGTTCTTTTTAGTCTTTCAGA
ATTACAAGAACTATAGTTCTCAACAGTGCTGTCTCTCAAGGAAGTTTGCTTATGTGGAAAGAGG
TGTTGTTAGCAAAGGTTTTTCCAGTTAATAAGTGTGTATCTGTCATATGCAGGATTCTAAGAAT
GACCCCTCCCATGACTTTGTATAATATCCTCCTCCCCTTCTGAGTATAGCGACAACTGTGACCA
TGTCATGTCTTGTTACTTAACAAAAGGGAGATTACCTGTCAGTGGCTGATCCAATGTTGAGAGT
CATGTCAGGCTGGTACAAGTGAGAGACAGCAGCAGTAGAACTCTGAACAGCATTGCTGGGCCTG
CCTTAAGGAGCCAGAGGCTTTGTTACCCACTGAGTGGGAGCTGCAGACCTTTTGCCACAGGACC
ATTTGACCCAGACACTTAACCGGTTTGGACATGGAAATGCTTGGGCGAGCAGTCAGCTGGGTAA
ACCTTCCCTGCAGCTTTGTAAGCGGGGCCCTACCTAGGCTTCTGATGTGCAGCAGTGGGTAAGA
AATTGGCAGTGCTGTACGTGGCTAGGTTTGTGTTTTGTAAAAAGTAACAATCTCAGTCCTGAGA
AGGCTTCATATGTGATTGCCTGCAGTGACTGGTTTTTAAGACAAGGTCTCATCTTGCACCCCAG
GCTGGTTCTCCCAGTTCTGCCCCTCAAGTGTCGATGTGCATCACCATGCCCAGTTGACTGATGG
CTTTTGACATAAGAATAAACTTGTTCCTAGCAAGCCCTATTCCTGGCTCTCTGCTAGGATGCTT
GGTGCCAGGACCCGTCTCCACTACTAGCCAGACTTGCGTTATTTTTTGTTGTGTAAAACTGGCA
GGATGAAGCTGAAGGTGTGGGCTGTAGGCATCTTCTCCTAGATACTCCTAAATTGTACTGACTT
AAAGGCCTGCCGGAAGTAGGGGGAAGAATGAGGAACAGTATTTTAGATCAGATCAACAAGAAGA
AAAATTCCCACCGTCATGTCGATTTGCTGGTGTGTCCAACCTTCTGACAGTGCAGTGGGACACT
GTTCTCTACAGAGTCCAGGCTCAAGAACCTCACGGTCCAGTTACAAAAACAACGAAACTGTTAA
AAAGCTTTGAGTAAGTTTACAATTTTGTATTGTGCCATTCATTGCTGTCCTGGGCCACAGGCTG
AACATACCTGCAAGAGCTTCAGCTACGACAGCTGTAATTTTTAAAAGATCACTTAGCTGAGTAG
CTCACGGGTCAAACCCTGTATGTTCCAAGGTTTTGTATTTACATGTTTCCCAAAATACCATGCT
TATTGTTGCTATTATTCAACCATGCTGCTGTAGCCTTGAGGGAAATAAACAGAACTGAAGGAAA
GGAACCCAGAGGTTAAACACTGTCGTCATCTTCGCATGGTGAGGGATCGAGTCCCAGTTCAAGA
CTTCAGGGAAGGGCATTCCCAAGCCACGTAGCAACATTTACGGCTTGTAAAACTTAAACTGTGA
TAGTTGTGAGGACTTAAATGATTAATATTAACATAGATGCTATGCTAATTAATATGCTAAATTT
AATGCATGTGAACATATGATGCTACAAAGATGACCACAGTCTTTACAAAGAGCAAAAGAATAAA
ACCAACCAACCCACCCAAGGGTTTTGTTACTCGTGCCCCTGTACTCTATCACTAGCTAAACAGA
CCTTTGTTGTTTCTGAAATGCTCCCTTTTCCAGTTTCTGCACTACCTAAGGATGCAAGTGTGAG
AGCAGACAGGCAGCAGGTGGCCCTGTGTGAGCAGGGGCCGGAGAAGGACTGGAAGTGTCCGTGC
AGGCACACAGGCGGCCACTGCGAGTGCAGCGGGAACCCCTGGACTGCAGAGGGATTCTTGCTGC
TCTCAACACATGTGTTGTGGGAACAGCTAGGTACTTGTGATACTAAGGAGGCTGCTTCTTGAAG
CTGCTCTGCTGCTGAGTTAGCAATTATCCCAAAATACAGAGTGGGGTCCTTTAGCTTGCGTAGC
ATTCCACCCTTTATTGGAAATGCTCCAGCGCTGTGTAAGAGGACCTGAAGCGCATTCTCTTGAG
CCTTACAAAGAGCTGCTGGGACAGTACTGTCCAGTCCACTAAGCTCACACCTCTTTCCCCCAGT
GGAGTCAAAGACGCTCAGTTGGTGCACGTCCTCCACAAGGCTGTCTTCACACTGGGGGACGTTC
TGGAGTCTTGCTAGGTTGTACCAGGTCCTCTTTTCCTCTGCTCACAATGTCTTTATGGGTTGAA
CATTAACTGCAGTAATATTTGAGGTACCTGTTGAATTTTTAAAGGCAGATTATTTATTTTTAAG
TTTGCTGCTATAATCGAAACCTAATAATGTCCTGTTGACTGTGCCTTTCATAACTGTCTCTGTG
CTACAACTGTCCATGTGTATTTGAAATAAAGATGTTTGAAAAGCTATGTTGAATCAAGATTCCT
TCTAATAAAAATGGCTTAAACCAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006244840 ⟹ XP_006244902

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	47,169,229 - 47,262,769 (-)	NCBI
mRatBN7.2	9	39,673,427 - 39,766,946 (-)	NCBI
Rnor_6.0	9	44,033,433 - 44,126,946 (-)	NCBI
Rnor_5.0	9	43,734,661 - 43,847,624 (-)	NCBI

Sequence:

show sequence

AGCGCGCGGCCGGCGGCGGCGGAGGCGGCTCCAGCTGCGTCGCCGGCGGCCGCGGTAGAAGCGC
CCTGGCCCGCGGCAGAAAGAAGAAAAAGAAACAGCAGCCCTTAGCCCTCAGCCTCTGAAAACCT
CGAAGACAATCTGGAATAGCAATACCCACGCTTGCTTTGCTGCTTGACACCTTCTGCCCAGCAT
CTGAAGTGAACCTCAATCATCAATTGCTTTGTTTTTGGCCCAGGTCCAAGGCGTTCTGCCTTCT
GTTGACTTGAGGCTGGAGAGAGACTGGTCTTGCTTGCTGTTGCCAACTTGTGAACCAGTGTGAT
GGTGAAATGAGATGAGGCTCCGAAATGGAACTGTGGCCACTGCGCTGGTGTTTGTCACGTCCTT
CCTTACCCTGTCCTGGTATACCACATGGCAAAATGGGAAAGAAAAATTAATTGCTTACCAACGA
GAATTCCTCGCTTTAAAAGAACGTCTTCGAGTGGCCGAACATAGGATATCTCAGCGCTCCTCTG
AGCTAAACACCATTGTCCAACAGTTCCGCCGAGCTGGAGCGGAGACTAATGGAAGTAAGGCTGG
TCTGAGTACGTTCTCAGATAATACCATAAAGCTTCTAAAAGAGTTGACAAGCAAAAAATCACTT
CAAGTGCCAAGTATTTATTATCATTTGCCTCATCTATTGCAAAATGAAAGAAGCCTTCAGCCCG
CCGTACAGATTGGCAGTGGAAGAACGGGAGTTTCAATAGTCATGGGGATTCCTACTGTGAAGAG
AGAAGTTAAATCTTACCTCATAGAGACCCTTCACTCCCTTATTGATAATCTGTATCCTGAAGAG
AAGCTGGACTGTGTTATAGTTGTCTTCATAGGAGAGACAGATCTTGATTATGTTCACAGCGTTG
TTGCCAACCTGGAGAAAGAATTTTCTAGAGAAATTAGTTCCGGCTTGCTAGAAGTAATCTCTCC
TCCTGAAAGCTATTACCCCGACTTAACAAACCTGAAGGAGACGTTCGGAGACTCCAAGGAAAGA
GTAAGATGGAGAACGAAGCAAAACCTGGACTATTGTTTTCTGATGATGTATGCTCAGGAGAAGG
GCATTTACTACATTCAGCTTGAAGATGATATTATTGTCAAGCAAAACTATTTTAATACCATAAA
AAATTTTGCACTTCAACTTTCTTCTGAAGAATGGATGATTCTAGAGTTTTCCCAGCTGGGCTTC
ATTGGGAAGATGTTCCAGGCGCCGGACCTAGCTCTGGTTGTGGAGTTCATTCTCATGTTCTATA
AGGAGAAGCCCATTGACTGGCTCTTGGACCACATTCTCTGGGTGAAGGTCTGCAACCCCGAAAA
AGATGCCAAACACTGCGACAGACAGAAGGCAAACCTACGAATCCGCTTCCGACCCTCCCTCTTC
CAGCACGTGGGTCTACACTCATCTCTGTCGGGGAAAATTCAGAAACTTACGGATAAAGATTACA
TGAAACCATTGCTTCTCAAGATCCACGTGAACCCGCCTGCAGAGGTCTCCACTTCCCTGAAGGT
GTACCAAGGGCACACACTGGAGAAGACCTACATGGGGGAAGACTTCTTTTGGGCCATCACCCCC
ACAGCTGGAGACTACATCTTGTTTAAATTTGATAAACCGGTCAATGTGGAGAGCGGCAATCAAG
AGCACCCAGGGGACATCCTGCTGAACACGACCGTGGAGGTTCTGCCTCTTAAGAGCGACAGTTT
GGAGATCAGCAAAGAAACCAAAGACAAACGATTAGAAGATGGCTATTTCAGAATAGGGAAATTT
GAGTACGGAGTTGCAGAGGGAATTGTGGATCCTGGACTGAACCCTATCTCAGCCTTTCGACTGT
CGGTTATTCAGAACTCTGCTGTCTGGGCCATTCTCAATGAGATTCATATTAAGAAAGTCACCAG
TTGATCTGCTTAGAAACCAACACGTCCTTTCTTGTGACTCTTGATTAAAGATACTGAGCACGCC
GTCCTCTTCTGCTCTGACTTGAACACTACCTCTCGTGAAGCCTACTGTAGATAAGATGATTACC
ATCTCCACTTGGGCAGGGACCCTTCCCACCGACAACTGCATTCATTTGAAACGAGGCTGTCCTC
CAAATTTGAACTTGACACAAACATTTTACAATTCTGACAGCCTGGTAACACGCCTGAGACTATT
TTGGTATTATACTAATACACAAGAGTTGTACATATTGTTACATTCCTTAAAATTTGAGAAAACT
GATGTTAAATACATTTTGTGAAGGGGGTACTTTTGAAGTTCACTTATTTTACTATTATAGACCC
TCTTTTATAGACGATCAGGGATGTTATATATATATAAATATAAATATATAAATACACATGAAGA
TGTTATGAAGTTAATTTATTAGAAGTACTTAAGAAGTACATATTTTTGTGCAGTAAAGTTTTGA
ATCAACACCTTTTTTTGAAGAAGCGGTTCCTGGCTTTTTTAAGTTCCTTCTATATTTTTATTTG
TAGATGCAGACATTCTAGATCAACGCCATTTTTTTCCAGTGCACTGCCATTCCAGATTGGTTCT
AGATGGGTTTCTTAACTTGAAGTACTTTTATAATCACAGCAATTCTGAACAAAATATTTTCAGA
GGCATTTGTCATTCCTAAAAAAACAATCAAGATTTTAAAAGACCAGAGCCCTCTGGAGGGTTAT
ATTACTGTACTGTGTGTGGTGTGTAGCCACAGAAACCCGTGTGATTGTCAGTGTCGGGTGGGAG
GCCCTGCCTCGTCTCCATACACTCCTTCACCCCCTCATAGTTCCCTCCATGTGGGTGACGAGAC
TCCTTTCCCTTTTGCTCTGTCTTTAATCAGTAGTTAGACACACTGTCTTCTTTTCTCCCTGGTC
CTTTTATAGACCTGTGGTGGGTTTTGACGTTCAGATAATGTTTCCTGGGTAATGCTGTTGGATG
AGTCATATTGGGTATAATTTTACAACCAACATTGTTATGTGGGGCTCTGGTGAAAGACAACCGT
AGCGCTTCTAGGTTTCCACAGCATGTTTGCTCTGCTATGTCCTGAATGCAAGGGTGAACGCGTG
TGCAGTCCCAAGAAGGGCTAGTTGGCAAACGTGCTTTACTCTTACACTTAGGAAGGCCGGGCAA
GTTGCCAGTCTTCTCTGGCTCTCCAGGAGCTGCGCATGCCCAGCAGGTGTGGGGGCCTAGGTGT
GGAAGTTCCCAGCTGGTGGCCTCCACCCTGGAACTTTCTCAGTTGCCCAGTGTATGGAACACAG
TACAAAGCAGCAGCCATTTTGTATGTTCTGACTGGGGAAACGTAGATAAACACTACTGTGCATG
TCAAAGCCCAGCTGAAGCTTTTCTTGGTGTTTTGTAAACTTTGTAAACATGGTGTTTTATTCAA
GTTTTTAATTTCTTCTCTGATTTCCTTTGCCCTGTGCCCACAAGCACATCCTTAGAAAATTTAA
GCACTATCTTCCCACACTCAAGTGTGCAGCAGGGTAACAGACTGAAACCATGCGGATGGATGCA
GGGGCCCTTTTAGGTCTCTGCTTTCTCAGTGGCTGCAAGTTCAGAGCTTTGAAAATCCAGTGGG
TCACTTGACTGTCTCCTGCGTGGGTCTTTGAGCTGTCCTCCCGCCAGGCTCCTCTCATTTGTCT
TGCCTGTAGGGACTCTTAGCCAAGTCCTTTCCTTCATTCCAGGAATCCCTTTTCCCTTTGTGCG
CTTACTCCCAGTGCCTAGAACATGCCTGAGCCTCGGCAGGTTCTTTTAGCATCTGGATGAGTGG
ATTAACTAGCCAGGTTGCTCACATCTCTCTCCGAGCACTATTTGCCTGCTATCTTGTCATGCAT
GGGCACACACACTCCGTGTCTAGTCTTCATTCTGTGTGGTGTGTGTTCTCCAACACACTCCGAG
CTCTGGAGGCCAGCTCTCCTGTCTTCCACGTCAGGTGCTCATTTGATCCATCAGTGTTAGTTGC
TCTCACTTTTGTGCCCAGTTCAGCACTAGACTATCAGAAACAGTTTGGTTGGCCCAAGCAAGAT
TTTTGTGGGAGCCCTGGAGATTTGTGAAGGTAAAGACTAGAGGAGGTGAAGCCAGAGTACTTAG
AACTGCAAGGTGTCCACCTTGTGGGCAACCAACGGACCTTCACCCACAGTGAATGGGAAAAGTG
CCAAATACAGTACCAATTATTTCTGTGAAGTAGATGGTGGTTGGTACCAGTGTATTTCAGATAC
TCCAGACTCTAGAGTGGTGCTGGCCTCTACAGAAGCCACACATCTGTTGAAATGAAATGTTGAG
TTCTGTGCCCATGTTGGCAGCATTTGGAGTGGTCAGCGGCCACATGGCCAGCAGCCACCATATT
GGATCCCAGAAATATGGGACACTGACATCATGGTTCTGCTGGTCATAAATATAAGCATTCTAGA
AAGGAGTGATGCATCCTGCTGCTGTGATTAAAAGTAGACCTATGGATTCATGGTAGTACAGGTG
AAGGTGTGTATTTTGATGGGACGGCCAAAATTGCCTGGCTACATGTTAGCATTATGATTCTTCC
CAGCATGCATTGTTTCAGTGTCCCCAAGAGGTACATTTGAAAAGCATGAGAAGTGAATACAGGT
GGATGATTTAGTTTGTAGCCTAGATGTGTGTTATGTCCGTCAGAGTGTGTTTGAACAAATGTCA
TTGGTTACATGCAAAAGATTATTTCAAAAGCTGTCAGGAAAAGTTGAGAGATTAGAGTTCTTTT
TAGTCTTTCAGAATTACAAGAACTATAGTTCTCAACAGTGCTGTCTCTCAAGGAAGTTTGCTTA
TGTGGAAAGAGGTGTTGTTAGCAAAGGTTTTTCCAGTTAATAAGTGTGTATCTGTCATATGCAG
GATTCTAAGAATGACCCCTCCCATGACTTTGTATAATATCCTCCTCCCCTTCTGAGTATAGCGA
CAACTGTGACCATGTCATGTCTTGTTACTTAACAAAAGGGAGATTACCTGTCAGTGGCTGATCC
AATGTTGAGAGTCATGTCAGGCTGGTACAAGTGAGAGACAGCAGCAGTAGAACTCTGAACAGCA
TTGCTGGGCCTGCCTTAAGGAGCCAGAGGCTTTGTTACCCACTGAGTGGGAGCTGCAGACCTTT
TGCCACAGGACCATTTGACCCAGACACTTAACCGGTTTGGACATGGAAATGCTTGGGCGAGCAG
TCAGCTGGGTAAACCTTCCCTGCAGCTTTGTAAGCGGGGCCCTACCTAGGCTTCTGATGTGCAG
CAGTGGGTAAGAAATTGGCAGTGCTGTACGTGGCTAGGTTTGTGTTTTGTAAAAAGTAACAATC
TCAGTCCTGAGAAGGCTTCATATGTGATTGCCTGCAGTGACTGGTTTTTAAGACAAGGTCTCAT
CTTGCACCCCAGGCTGGTTCTCCCAGTTCTGCCCCTCAAGTGTCGATGTGCATCACCATGCCCA
GTTGACTGATGGCTTTTGACATAAGAATAAACTTGTTCCTAGCAAGCCCTATTCCTGGCTCTCT
GCTAGGATGCTTGGTGCCAGGACCCGTCTCCACTACTAGCCAGACTTGCGTTATTTTTTGTTGT
GTAAAACTGGCAGGATGAAGCTGAAGGTGTGGGCTGTAGGCATCTTCTCCTAGATACTCCTAAA
TTGTACTGACTTAAAGGCCTGCCGGAAGTAGGGGGAAGAATGAGGAACAGTATTTTAGATCAGA
TCAACAAGAAGAAAAATTCCCACCGTCATGTCGATTTGCTGGTGTGTCCAACCTTCTGACAGTG
CAGTGGGACACTGTTCTCTACAGAGTCCAGGCTCAAGAACCTCACGGTCCAGTTACAAAAACAA
CGAAACTGTTAAAAAGCTTTGAGTAAGTTTACAATTTTGTATTGTGCCATTCATTGCTGTCCTG
GGCCACAGGCTGAACATACCTGCAAGAGCTTCAGCTACGACAGCTGTAATTTTTAAAAGATCAC
TTAGCTGAGTAGCTCACGGGTCAAACCCTGTATGTTCCAAGGTTTTGTATTTACATGTTTCCCA
AAATACCATGCTTATTGTTGCTATTATTCAACCATGCTGCTGTAGCCTTGAGGGAAATAAACAG
AACTGAAGGAAAGGAACCCAGAGGTTAAACACTGTCGTCATCTTCGCATGGTGAGGGATCGAGT
CCCAGTTCAAGACTTCAGGGAAGGGCATTCCCAAGCCACGTAGCAACATTTACGGCTTGTAAAA
CTTAAACTGTGATAGTTGTGAGGACTTAAATGATTAATATTAACATAGATGCTATGCTAATTAA
TATGCTAAATTTAATGCATGTGAACATATGATGCTACAAAGATGACCACAGTCTTTACAAAGAG
CAAAAGAATAAAACCAACCAACCCACCCAAGGGTTTTGTTACTCGTGCCCCTGTACTCTATCAC
TAGCTAAACAGACCTTTGTTGTTTCTGAAATGCTCCCTTTTCCAGTTTCTGCACTACCTAAGGA
TGCAAGTGTGAGAGCAGACAGGCAGCAGGTGGCCCTGTGTGAGCAGGGGCCGGAGAAGGACTGG
AAGTGTCCGTGCAGGCACACAGGCGGCCACTGCGAGTGCAGCGGGAACCCCTGGACTGCAGAGG
GATTCTTGCTGCTCTCAACACATGTGTTGTGGGAACAGCTAGGTACTTGTGATACTAAGGAGGC
TGCTTCTTGAAGCTGCTCTGCTGCTGAGTTAGCAATTATCCCAAAATACAGAGTGGGGTCCTTT
AGCTTGCGTAGCATTCCACCCTTTATTGGAAATGCTCCAGCGCTGTGTAAGAGGACCTGAAGCG
CATTCTCTTGAGCCTTACAAAGAGCTGCTGGGACAGTACTGTCCAGTCCACTAAGCTCACACCT
CTTTCCCCCAGTGGAGTCAAAGACGCTCAGTTGGTGCACGTCCTCCACAAGGCTGTCTTCACAC
TGGGGGACGTTCTGGAGTCTTGCTAGGTTGTACCAGGTCCTCTTTTCCTCTGCTCACAATGTCT
TTATGGGTTGAACATTAACTGCAGTAATATTTGAGGTACCTGTTGAATTTTTAAAGGCAGATTA
TTTATTTTTAAGTTTGCTGCTATAATCGAAACCTAATAATGTCCTGTTGACTGTGCCTTTCATA
ACTGTCTCTGTGCTACAACTGTCCATGTGTATTTGAAATAAAGATGTTTGAAAAGCTATGTTGA
ATCAAGATTCCTTCTAATAAAAATGGCTTAAACCAAA

hide sequence

RefSeq Acc Id:

XM_017596573 ⟹ XP_017452062

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	47,169,229 - 47,262,721 (-)	NCBI
mRatBN7.2	9	39,673,427 - 39,766,885 (-)	NCBI
Rnor_6.0	9	44,033,433 - 44,126,791 (-)	NCBI

Sequence:

show sequence

AGCGGAACCCGGGCATCCCGAGAAAGAAGAAAAAGAAACAGCAGCCCTTAGCCCTCAGCCTCTG
AAAACCTCGAAGACAATCTGGAATAGCAATACCCACGCTTGCTTTGCTGCTTGACACCTTCTGC
CCAGCATCTGAAGTGAACCTCAATCATCAATTGCTTTGTTTTTGGCCCAGGTCCAAGGCGTTCT
GCCTTCTGTTGACTTGAGGCTGGAGAGAGACTGGTCTTGCTTGCTGTTGCCAACTTGTGAACCA
GTGTGATGGTGAAATGAGATGAGGCTCCGAAATGGAACTGTGGCCACTGCGCTGGTGTTTGTCA
CGTCCTTCCTTACCCTGTCCTGGTATACCACATGGCAAAATGGGAAAGAAAAATTAATTGCTTA
CCAACGAGAATTCCTCGCTTTAAAAGAACGTCTTCGAGTGGCCGAACATAGGATATCTCAGCGC
TCCTCTGAGCTAAACACCATTGTCCAACAGTTCCGCCGAGCTGGAGCGGAGACTAATGGAAGTA
AGGCTGGTCTGAGTACGTTCTCAGATAATACCATAAAGCTTCTAAAAGAGTTGACAAGCAAAAA
ATCACTTCAAGTGCCAAGTATTTATTATCATTTGCCTCATCTATTGCAAAATGAAAGAAGCCTT
CAGCCCGCCGTACAGATTGGCAGTGGAAGAACGGGAGTTTCAATAGTCATGGGGATTCCTACTG
TGAAGAGAGAAGTTAAATCTTACCTCATAGAGACCCTTCACTCCCTTATTGATAATCTGTATCC
TGAAGAGAAGCTGGACTGTGTTATAGTTGTCTTCATAGGAGAGACAGATCTTGATTATGTTCAC
AGCGTTGTTGCCAACCTGGAGAAAGAATTTTCTAGAGAAATTAGTTCCGGCTTGCTAGAAGTAA
TCTCTCCTCCTGAAAGCTATTACCCCGACTTAACAAACCTGAAGGAGACGTTCGGAGACTCCAA
GGAAAGAGTAAGATGGAGAACGAAGCAAAACCTGGACTATTGTTTTCTGATGATGTATGCTCAG
GAGAAGGGCATTTACTACATTCAGCTTGAAGATGATATTATTGTCAAGCAAAACTATTTTAATA
CCATAAAAAATTTTGCACTTCAACTTTCTTCTGAAGAATGGATGATTCTAGAGTTTTCCCAGCT
GGGCTTCATTGGGAAGATGTTCCAGGCGCCGGACCTAGCTCTGGTTGTGGAGTTCATTCTCATG
TTCTATAAGGAGAAGCCCATTGACTGGCTCTTGGACCACATTCTCTGGGTGAAGGTCTGCAACC
CCGAAAAAGATGCCAAACACTGCGACAGACAGAAGGCAAACCTACGAATCCGCTTCCGACCCTC
CCTCTTCCAGCACGTGGGTCTACACTCATCTCTGTCGGGGAAAATTCAGAAACTTACGGATAAA
GATTACATGAAACCATTGCTTCTCAAGATCCACGTGAACCCGCCTGCAGAGGTCTCCACTTCCC
TGAAGGTGTACCAAGGGCACACACTGGAGAAGACCTACATGGGGGAAGACTTCTTTTGGGCCAT
CACCCCCACAGCTGGAGACTACATCTTGTTTAAATTTGATAAACCGGTCAATGTGGAGAGTTAT
TTGTTCCACAGCGGCAATCAAGAGCACCCAGGGGACATCCTGCTGAACACGACCGTGGAGGTTC
TGCCTCTTAAGAGCGACAGTTTGGAGATCAGCAAAGAAACCAAAGACAAACGATTAGAAGATGG
CTATTTCAGAATAGGGAAATTTGAGTACGGAGTTGCAGAGGGAATTGTGGATCCTGGACTGAAC
CCTATCTCAGCCTTTCGACTGTCGGTTATTCAGAACTCTGCTGTCTGGGCCATTCTCAATGAGA
TTCATATTAAGAAAGTCACCAGTTGATCTGCTTAGAAACCAACACGTCCTTTCTTGTGACTCTT
GATTAAAGATACTGAGCACGCCGTCCTCTTCTGCTCTGACTTGAACACTACCTCTCGTGAAGCC
TACTGTAGATAAGATGATTACCATCTCCACTTGGGCAGGGACCCTTCCCACCGACAACTGCATT
CATTTGAAACGAGGCTGTCCTCCAAATTTGAACTTGACACAAACATTTTACAATTCTGACAGCC
TGGTAACACGCCTGAGACTATTTTGGTATTATACTAATACACAAGAGTTGTACATATTGTTACA
TTCCTTAAAATTTGAGAAAACTGATGTTAAATACATTTTGTGAAGGGGGTACTTTTGAAGTTCA
CTTATTTTACTATTATAGACCCTCTTTTATAGACGATCAGGGATGTTATATATATATAAATATA
AATATATAAATACACATGAAGATGTTATGAAGTTAATTTATTAGAAGTACTTAAGAAGTACATA
TTTTTGTGCAGTAAAGTTTTGAATCAACACCTTTTTTTGAAGAAGCGGTTCCTGGCTTTTTTAA
GTTCCTTCTATATTTTTATTTGTAGATGCAGACATTCTAGATCAACGCCATTTTTTTCCAGTGC
ACTGCCATTCCAGATTGGTTCTAGATGGGTTTCTTAACTTGAAGTACTTTTATAATCACAGCAA
TTCTGAACAAAATATTTTCAGAGGCATTTGTCATTCCTAAAAAAACAATCAAGATTTTAAAAGA
CCAGAGCCCTCTGGAGGGTTATATTACTGTACTGTGTGTGGTGTGTAGCCACAGAAACCCGTGT
GATTGTCAGTGTCGGGTGGGAGGCCCTGCCTCGTCTCCATACACTCCTTCACCCCCTCATAGTT
CCCTCCATGTGGGTGACGAGACTCCTTTCCCTTTTGCTCTGTCTTTAATCAGTAGTTAGACACA
CTGTCTTCTTTTCTCCCTGGTCCTTTTATAGACCTGTGGTGGGTTTTGACGTTCAGATAATGTT
TCCTGGGTAATGCTGTTGGATGAGTCATATTGGGTATAATTTTACAACCAACATTGTTATGTGG
GGCTCTGGTGAAAGACAACCGTAGCGCTTCTAGGTTTCCACAGCATGTTTGCTCTGCTATGTCC
TGAATGCAAGGGTGAACGCGTGTGCAGTCCCAAGAAGGGCTAGTTGGCAAACGTGCTTTACTCT
TACACTTAGGAAGGCCGGGCAAGTTGCCAGTCTTCTCTGGCTCTCCAGGAGCTGCGCATGCCCA
GCAGGTGTGGGGGCCTAGGTGTGGAAGTTCCCAGCTGGTGGCCTCCACCCTGGAACTTTCTCAG
TTGCCCAGTGTATGGAACACAGTACAAAGCAGCAGCCATTTTGTATGTTCTGACTGGGGAAACG
TAGATAAACACTACTGTGCATGTCAAAGCCCAGCTGAAGCTTTTCTTGGTGTTTTGTAAACTTT
GTAAACATGGTGTTTTATTCAAGTTTTTAATTTCTTCTCTGATTTCCTTTGCCCTGTGCCCACA
AGCACATCCTTAGAAAATTTAAGCACTATCTTCCCACACTCAAGTGTGCAGCAGGGTAACAGAC
TGAAACCATGCGGATGGATGCAGGGGCCCTTTTAGGTCTCTGCTTTCTCAGTGGCTGCAAGTTC
AGAGCTTTGAAAATCCAGTGGGTCACTTGACTGTCTCCTGCGTGGGTCTTTGAGCTGTCCTCCC
GCCAGGCTCCTCTCATTTGTCTTGCCTGTAGGGACTCTTAGCCAAGTCCTTTCCTTCATTCCAG
GAATCCCTTTTCCCTTTGTGCGCTTACTCCCAGTGCCTAGAACATGCCTGAGCCTCGGCAGGTT
CTTTTAGCATCTGGATGAGTGGATTAACTAGCCAGGTTGCTCACATCTCTCTCCGAGCACTATT
TGCCTGCTATCTTGTCATGCATGGGCACACACACTCCGTGTCTAGTCTTCATTCTGTGTGGTGT
GTGTTCTCCAACACACTCCGAGCTCTGGAGGCCAGCTCTCCTGTCTTCCACGTCAGGTGCTCAT
TTGATCCATCAGTGTTAGTTGCTCTCACTTTTGTGCCCAGTTCAGCACTAGACTATCAGAAACA
GTTTGGTTGGCCCAAGCAAGATTTTTGTGGGAGCCCTGGAGATTTGTGAAGGTAAAGACTAGAG
GAGGTGAAGCCAGAGTACTTAGAACTGCAAGGTGTCCACCTTGTGGGCAACCAACGGACCTTCA
CCCACAGTGAATGGGAAAAGTGCCAAATACAGTACCAATTATTTCTGTGAAGTAGATGGTGGTT
GGTACCAGTGTATTTCAGATACTCCAGACTCTAGAGTGGTGCTGGCCTCTACAGAAGCCACACA
TCTGTTGAAATGAAATGTTGAGTTCTGTGCCCATGTTGGCAGCATTTGGAGTGGTCAGCGGCCA
CATGGCCAGCAGCCACCATATTGGATCCCAGAAATATGGGACACTGACATCATGGTTCTGCTGG
TCATAAATATAAGCATTCTAGAAAGGAGTGATGCATCCTGCTGCTGTGATTAAAAGTAGACCTA
TGGATTCATGGTAGTACAGGTGAAGGTGTGTATTTTGATGGGACGGCCAAAATTGCCTGGCTAC
ATGTTAGCATTATGATTCTTCCCAGCATGCATTGTTTCAGTGTCCCCAAGAGGTACATTTGAAA
AGCATGAGAAGTGAATACAGGTGGATGATTTAGTTTGTAGCCTAGATGTGTGTTATGTCCGTCA
GAGTGTGTTTGAACAAATGTCATTGGTTACATGCAAAAGATTATTTCAAAAGCTGTCAGGAAAA
GTTGAGAGATTAGAGTTCTTTTTAGTCTTTCAGAATTACAAGAACTATAGTTCTCAACAGTGCT
GTCTCTCAAGGAAGTTTGCTTATGTGGAAAGAGGTGTTGTTAGCAAAGGTTTTTCCAGTTAATA
AGTGTGTATCTGTCATATGCAGGATTCTAAGAATGACCCCTCCCATGACTTTGTATAATATCCT
CCTCCCCTTCTGAGTATAGCGACAACTGTGACCATGTCATGTCTTGTTACTTAACAAAAGGGAG
ATTACCTGTCAGTGGCTGATCCAATGTTGAGAGTCATGTCAGGCTGGTACAAGTGAGAGACAGC
AGCAGTAGAACTCTGAACAGCATTGCTGGGCCTGCCTTAAGGAGCCAGAGGCTTTGTTACCCAC
TGAGTGGGAGCTGCAGACCTTTTGCCACAGGACCATTTGACCCAGACACTTAACCGGTTTGGAC
ATGGAAATGCTTGGGCGAGCAGTCAGCTGGGTAAACCTTCCCTGCAGCTTTGTAAGCGGGGCCC
TACCTAGGCTTCTGATGTGCAGCAGTGGGTAAGAAATTGGCAGTGCTGTACGTGGCTAGGTTTG
TGTTTTGTAAAAAGTAACAATCTCAGTCCTGAGAAGGCTTCATATGTGATTGCCTGCAGTGACT
GGTTTTTAAGACAAGGTCTCATCTTGCACCCCAGGCTGGTTCTCCCAGTTCTGCCCCTCAAGTG
TCGATGTGCATCACCATGCCCAGTTGACTGATGGCTTTTGACATAAGAATAAACTTGTTCCTAG
CAAGCCCTATTCCTGGCTCTCTGCTAGGATGCTTGGTGCCAGGACCCGTCTCCACTACTAGCCA
GACTTGCGTTATTTTTTGTTGTGTAAAACTGGCAGGATGAAGCTGAAGGTGTGGGCTGTAGGCA
TCTTCTCCTAGATACTCCTAAATTGTACTGACTTAAAGGCCTGCCGGAAGTAGGGGGAAGAATG
AGGAACAGTATTTTAGATCAGATCAACAAGAAGAAAAATTCCCACCGTCATGTCGATTTGCTGG
TGTGTCCAACCTTCTGACAGTGCAGTGGGACACTGTTCTCTACAGAGTCCAGGCTCAAGAACCT
CACGGTCCAGTTACAAAAACAACGAAACTGTTAAAAAGCTTTGAGTAAGTTTACAATTTTGTAT
TGTGCCATTCATTGCTGTCCTGGGCCACAGGCTGAACATACCTGCAAGAGCTTCAGCTACGACA
GCTGTAATTTTTAAAAGATCACTTAGCTGAGTAGCTCACGGGTCAAACCCTGTATGTTCCAAGG
TTTTGTATTTACATGTTTCCCAAAATACCATGCTTATTGTTGCTATTATTCAACCATGCTGCTG
TAGCCTTGAGGGAAATAAACAGAACTGAAGGAAAGGAACCCAGAGGTTAAACACTGTCGTCATC
TTCGCATGGTGAGGGATCGAGTCCCAGTTCAAGACTTCAGGGAAGGGCATTCCCAAGCCACGTA
GCAACATTTACGGCTTGTAAAACTTAAACTGTGATAGTTGTGAGGACTTAAATGATTAATATTA
ACATAGATGCTATGCTAATTAATATGCTAAATTTAATGCATGTGAACATATGATGCTACAAAGA
TGACCACAGTCTTTACAAAGAGCAAAAGAATAAAACCAACCAACCCACCCAAGGGTTTTGTTAC
TCGTGCCCCTGTACTCTATCACTAGCTAAACAGACCTTTGTTGTTTCTGAAATGCTCCCTTTTC
CAGTTTCTGCACTACCTAAGGATGCAAGTGTGAGAGCAGACAGGCAGCAGGTGGCCCTGTGTGA
GCAGGGGCCGGAGAAGGACTGGAAGTGTCCGTGCAGGCACACAGGCGGCCACTGCGAGTGCAGC
GGGAACCCCTGGACTGCAGAGGGATTCTTGCTGCTCTCAACACATGTGTTGTGGGAACAGCTAG
GTACTTGTGATACTAAGGAGGCTGCTTCTTGAAGCTGCTCTGCTGCTGAGTTAGCAATTATCCC
AAAATACAGAGTGGGGTCCTTTAGCTTGCGTAGCATTCCACCCTTTATTGGAAATGCTCCAGCG
CTGTGTAAGAGGACCTGAAGCGCATTCTCTTGAGCCTTACAAAGAGCTGCTGGGACAGTACTGT
CCAGTCCACTAAGCTCACACCTCTTTCCCCCAGTGGAGTCAAAGACGCTCAGTTGGTGCACGTC
CTCCACAAGGCTGTCTTCACACTGGGGGACGTTCTGGAGTCTTGCTAGGTTGTACCAGGTCCTC
TTTTCCTCTGCTCACAATGTCTTTATGGGTTGAACATTAACTGCAGTAATATTTGAGGTACCTG
TTGAATTTTTAAAGGCAGATTATTTATTTTTAAGTTTGCTGCTATAATCGAAACCTAATAATGT
CCTGTTGACTGTGCCTTTCATAACTGTCTCTGTGCTACAACTGTCCATGTGTATTTGAAATAAA
GATGTTTGAAAAGCTATGTTGAATCAAGATTCCTTCTAATAAAAATGGCTTAAACCAAA

hide sequence

RefSeq Acc Id:

XM_039083970 ⟹ XP_038939898

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	47,169,229 - 47,282,574 (-)	NCBI
mRatBN7.2	9	39,673,427 - 39,786,747 (-)	NCBI

RefSeq Acc Id:

XM_039083971 ⟹ XP_038939899

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	47,169,229 - 47,262,439 (-)	NCBI
mRatBN7.2	9	39,673,427 - 39,766,689 (-)	NCBI

RefSeq Acc Id:

XM_063267508 ⟹ XP_063123578

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	47,169,229 - 47,282,577 (-)	NCBI

RefSeq Acc Id:

XM_063267509 ⟹ XP_063123579

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	47,169,229 - 47,282,576 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001012225	(Get FASTA)	NCBI Sequence Viewer
	NP_001153627	(Get FASTA)	NCBI Sequence Viewer
	XP_006244902	(Get FASTA)	NCBI Sequence Viewer
	XP_017452062	(Get FASTA)	NCBI Sequence Viewer
	XP_038939898	(Get FASTA)	NCBI Sequence Viewer
	XP_038939899	(Get FASTA)	NCBI Sequence Viewer
	XP_063123578	(Get FASTA)	NCBI Sequence Viewer
	XP_063123579	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH88215	(Get FASTA)	NCBI Sequence Viewer
	EDL99236	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000024701
	ENSRNOP00000095476
	ENSRNOP00000101140
GenBank Protein	Q5M854	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001012225 ⟸ NM_001012225
- Peptide Label:	isoform 2
- UniProtKB:	Q5M854 (UniProtKB/Swiss-Prot), A6INH4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRLRNGTVATALVFVTSFLTLSWYTTWQNGKEKLIAYQREFLALKERLRVAEHRISQRSSELNT IVQQFRRAGAETNGNNTIKLLKELTSKKSLQVPSIYYHLPHLLQNERSLQPAVQIGSGRTGVSI VMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDLDYVHSVVANLEKEFSREIS SGLLEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGIYYIQLEDDIIV KQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLALVVEFILMFYKEKPIDWLLDHIL WVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQKLTDKDYMKPLLLKIHVNPP AEVSTSLKVYQGHTLEKTYMGEDFFWAITPTAGDYILFKFDKPVNVESYLFHSGNQEHPGDILL NTTVEVLPLKSDSLEISKETKDKRLEDGYFRIGKFEYGVAEGIVDPGLNPISAFRLSVIQNSAV WAILNEIHIKKVTS hide sequence

RefSeq Acc Id:	NP_001153627 ⟸ NM_001160155
- Peptide Label:	isoform 1
- UniProtKB:	F1LMP1 (UniProtKB/TrEMBL), A6INH4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRLRNGTVATALVFVTSFLTLSWYTTWQNGKEKLIAYQREFLALKERLRVAEHRISQRSSELNT IVQQFRRAGAETNGSKAGLSTFSDNTIKLLKELTSKKSLQVPSIYYHLPHLLQNERSLQPAVQI GSGRTGVSIVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDLDYVHSVVANL EKEFSREISSGLLEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGIYY IQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLALVVEFILMFYKEKP IDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQKLTDKDYMKPL LLKIHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWAITPTAGDYILFKFDKPVNVESYLFHSGN QEHPGDILLNTTVEVLPLKSDSLEISKETKDKRLEDGYFRIGKFEYGVAEGIVDPGLNPISAFR LSVIQNSAVWAILNEIHIKKVTS hide sequence

RefSeq Acc Id:	XP_006244902 ⟸ XM_006244840
- Peptide Label:	isoform X2
- UniProtKB:	A6INH4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRLRNGTVATALVFVTSFLTLSWYTTWQNGKEKLIAYQREFLALKERLRVAEHRISQRSSELNT IVQQFRRAGAETNGSKAGLSTFSDNTIKLLKELTSKKSLQVPSIYYHLPHLLQNERSLQPAVQI GSGRTGVSIVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDLDYVHSVVANL EKEFSREISSGLLEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGIYY IQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLALVVEFILMFYKEKP IDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQKLTDKDYMKPL LLKIHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWAITPTAGDYILFKFDKPVNVESGNQEHPG DILLNTTVEVLPLKSDSLEISKETKDKRLEDGYFRIGKFEYGVAEGIVDPGLNPISAFRLSVIQ NSAVWAILNEIHIKKVTS hide sequence

RefSeq Acc Id:	XP_017452062 ⟸ XM_017596573
- Peptide Label:	isoform X1
- UniProtKB:	F1LMP1 (UniProtKB/TrEMBL), A6INH4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRLRNGTVATALVFVTSFLTLSWYTTWQNGKEKLIAYQREFLALKERLRVAEHRISQRSSELNT IVQQFRRAGAETNGSKAGLSTFSDNTIKLLKELTSKKSLQVPSIYYHLPHLLQNERSLQPAVQI GSGRTGVSIVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDLDYVHSVVANL EKEFSREISSGLLEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGIYY IQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLALVVEFILMFYKEKP IDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQKLTDKDYMKPL LLKIHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWAITPTAGDYILFKFDKPVNVESYLFHSGN QEHPGDILLNTTVEVLPLKSDSLEISKETKDKRLEDGYFRIGKFEYGVAEGIVDPGLNPISAFR LSVIQNSAVWAILNEIHIKKVTS hide sequence

Ensembl Acc Id:

ENSRNOP00000024701 ⟸ ENSRNOT00000024701

RefSeq Acc Id:	XP_038939898 ⟸ XM_039083970
- Peptide Label:	isoform X1
- UniProtKB:	F1LMP1 (UniProtKB/TrEMBL), A6INH4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038939899 ⟸ XM_039083971
- Peptide Label:	isoform X1
- UniProtKB:	F1LMP1 (UniProtKB/TrEMBL), A6INH4 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000095476 ⟸ ENSRNOT00000097529

RefSeq Acc Id:	XP_063123578 ⟸ XM_063267508
- Peptide Label:	isoform X3
- UniProtKB:	Q5M854 (UniProtKB/Swiss-Prot), A6INH4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123579 ⟸ XM_063267509
- Peptide Label:	isoform X4
- UniProtKB:	A6INH4 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000101140 ⟸ ENSRNOT00000138713

Protein Domains

MGAT4 A/B/C C-terminal MGAT4 conserved region

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5M854-F1-model_v2	AlphaFold	Q5M854	1-526	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13696614

Promoter ID:

EPDNEW_R7139

Type:

initiation region

Name:

Mgat4a_1

Description:

mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase,isozyme A

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	9	44,126,890 - 44,126,950	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1305650	AgrOrtholog
BioCyc Gene	G2FUF-27787	BioCyc
BioCyc Pathway	PWY-7426 [complex N-linked glycan biosynthesis (vertebrates)]	BioCyc
BioCyc Pathway Image	PWY-7426	BioCyc
Ensembl Genes	ENSRNOG00000018276	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000024701	ENTREZGENE
	ENSRNOT00000097529	ENTREZGENE
	ENSRNOT00000138713	ENTREZGENE
IMAGE_CLONE	IMAGE:7383944	IMAGE-MGC_LOAD
InterPro	Glyco_transf_54	UniProtKB/Swiss-Prot
	MGAT4_A/B/C_C	UniProtKB/Swiss-Prot
KEGG Report	rno:367252	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:108939	IMAGE-MGC_LOAD
NCBI Gene	367252	ENTREZGENE
PANTHER	ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 4-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE A	UniProtKB/Swiss-Prot
	PTHR12062	UniProtKB/Swiss-Prot
Pfam	Glyco_transf_54	UniProtKB/Swiss-Prot
	MGAT4A_C	UniProtKB/Swiss-Prot
PhenoGen	Mgat4a	PhenoGen
RatGTEx	ENSRNOG00000018276	RatGTEx
UniProt	A0A8I6GL59_RAT	UniProtKB/TrEMBL
	A0ABK0L9W4_RAT	UniProtKB/TrEMBL
	A6INH4	ENTREZGENE, UniProtKB/TrEMBL
	F1LMP1	ENTREZGENE, UniProtKB/TrEMBL
	MGT4A_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2018-07-05	Mgat4a	alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A	Mgat4a	mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-06	Mgat4a	mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	Mgat4a	mannoside acetylglucosaminyltransferase 4, isoenzyme A	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	Mgat4a	mannoside acetylglucosaminyltransferase 4, isoenzyme A	Mgat4a_predicted	mannoside acetylglucosaminyltransferase 4, isoenzyme A (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-12	Mgat4a_predicted	mannoside acetylglucosaminyltransferase 4, isoenzyme A (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Annotations - KEGG (archival)

BioCyc Pathways

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Imported Annotations - KEGG (archival)

BioCyc Pathways