Rgs17 (regulator of G-protein signaling 17) - Rat Genome Database

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Gene: Rgs17 (regulator of G-protein signaling 17) Rattus norvegicus
Analyze
Symbol: Rgs17
Name: regulator of G-protein signaling 17
RGD ID: 1305515
Description: Involved in response to amphetamine. Orthologous to human RGS17 (regulator of G protein signaling 17); INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 2,2',4,4'-Tetrabromodiphenyl ether.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC308118
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8144,627,583 - 44,729,957 (-)NCBIGRCr8
mRatBN7.2142,222,248 - 42,324,625 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl142,227,070 - 42,324,609 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx142,769,813 - 42,876,072 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0148,757,005 - 48,863,271 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0142,845,277 - 42,951,542 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0142,491,566 - 42,587,735 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl142,492,761 - 42,587,721 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0143,821,442 - 43,918,316 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4136,523,685 - 36,623,005 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1136,528,233 - 36,587,444 (-)NCBI
Celera137,894,908 - 37,992,338 (-)NCBICelera
Cytogenetic Map1q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
3. The brain gene expression profile of dopamine D2/D3 receptors and associated signaling proteins following amphetamine self-administration. Sun H, etal., Neuroscience. 2015 Oct 29;307:253-61. doi: 10.1016/j.neuroscience.2015.08.053. Epub 2015 Aug 28.
Additional References at PubMed
PMID:21620966   PMID:33854102  


Genomics

Comparative Map Data
Rgs17
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8144,627,583 - 44,729,957 (-)NCBIGRCr8
mRatBN7.2142,222,248 - 42,324,625 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl142,227,070 - 42,324,609 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx142,769,813 - 42,876,072 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0148,757,005 - 48,863,271 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0142,845,277 - 42,951,542 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0142,491,566 - 42,587,735 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl142,492,761 - 42,587,721 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0143,821,442 - 43,918,316 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4136,523,685 - 36,623,005 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1136,528,233 - 36,587,444 (-)NCBI
Celera137,894,908 - 37,992,338 (-)NCBICelera
Cytogenetic Map1q11NCBI
RGS17
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386153,004,459 - 153,131,282 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6153,004,459 - 153,131,282 (-)EnsemblGRCh38hg38GRCh38
GRCh376153,325,594 - 153,452,417 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 366153,373,719 - 153,494,082 (-)NCBINCBI36Build 36hg18NCBI36
Build 346153,424,147 - 153,544,503NCBI
Celera6154,065,698 - 154,186,885 (-)NCBICelera
Cytogenetic Map6q25.2NCBI
HuRef6150,894,828 - 151,015,916 (-)NCBIHuRef
CHM1_16153,595,948 - 153,716,160 (-)NCBICHM1_1
T2T-CHM13v2.06154,205,757 - 154,333,435 (-)NCBIT2T-CHM13v2.0
Rgs17
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39105,775,663 - 5,872,413 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl105,775,663 - 5,872,400 (-)EnsemblGRCm39 Ensembl
GRCm38105,825,663 - 5,922,412 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl105,825,663 - 5,922,400 (-)EnsemblGRCm38mm10GRCm38
MGSCv37104,424,141 - 4,520,878 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36104,424,200 - 4,513,768 (+)NCBIMGSCv36mm8
Celera105,759,665 - 5,856,182 (-)NCBICelera
Cytogenetic Map10A1NCBI
cM Map101.91NCBI
Rgs17
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554398,687,672 - 8,802,260 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554398,687,775 - 8,805,229 (+)NCBIChiLan1.0ChiLan1.0
RGS17
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25173,033,415 - 173,159,797 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16170,926,266 - 171,052,768 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06150,826,838 - 150,953,386 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16155,521,826 - 155,555,151 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6155,521,826 - 155,555,151 (-)Ensemblpanpan1.1panPan2
RGS17
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1143,170,815 - 43,264,277 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl143,174,861 - 43,264,233 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha144,006,019 - 44,101,969 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0143,351,937 - 43,448,218 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl143,356,366 - 43,448,494 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1143,219,387 - 43,315,030 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0143,082,813 - 43,179,038 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0143,570,545 - 43,666,573 (-)NCBIUU_Cfam_GSD_1.0
Rgs17
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946138,366,077 - 138,400,749 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364895,624,525 - 5,652,794 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364895,623,859 - 5,652,740 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RGS17
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl113,340,355 - 13,442,039 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1113,340,253 - 13,442,058 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2115,590,394 - 15,689,403 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RGS17
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11380,493,900 - 80,620,714 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604052,819,781 - 52,940,843 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rgs17
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247855,086,765 - 5,218,367 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247855,086,828 - 5,225,147 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rgs17
647 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:627
Count of miRNA genes:259
Interacting mature miRNAs:319
Transcripts:ENSRNOT00000025355
Prediction methods:Microtar, Miranda
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331732Srn4Serum renin concentration QTL 44.467renin activity (VT:0005581)plasma renin activity level (CMO:0000116)13523959878430678Rat
631688Hcas2Hepatocarcinoma susceptibility QTL 230.0001liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)15925874115540829Rat
1357397Bw41Body weight QTL 414.190.0001body mass (VT:0001259)body weight (CMO:0000012)12234064749361612Rat
1578650Bmd6Bone mineral density QTL 612.2femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)150910843284926Rat
1578651Bmd7Bone mineral density QTL 714.2femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)150910843284926Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)130882023123479925Rat
1331792Rf29Renal function QTL 294.589urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)13523959878430678Rat
2313062Bmd73Bone mineral density QTL 733.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)11148131282174945Rat
8552900Pigfal1Plasma insulin-like growth factor 1 level QTL 17.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)13483685879836858Rat
1554320Bmd1Bone mineral density QTL 112.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)150910886060548Rat
1354643Foco2Food consumption QTL 27.170.0001eating behavior trait (VT:0001431)food intake rate (CMO:0000427)13344984878449848Rat
2313065Bss67Bone structure and strength QTL 673.10.0001tibia area (VT:1000281)tibia total energy absorbed before break (CMO:0001736)11148131282174945Rat
7421626Bp360Blood pressure QTL 3600.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1439328949393289Rat
1357400Bw62Body weight QTL624.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)12234064767340647Rat
1357401Bw43Body weight QTL 433.75body mass (VT:0001259)body weight (CMO:0000012)12234064749361612Rat
2313069Bss68Bone structure and strength QTL 682.90.0001tibia size trait (VT:0100001)tibia total energy absorbed before break (CMO:0001736)11148131282174945Rat
631495Bp96Blood pressure QTL 964.52arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)122340647102268831Rat
631494Bp95Blood pressure QTL 95400.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)11620621049268520Rat
2313075Bss66Bone structure and strength QTL 663.40.0001tibia length (VT:0004357)tibia length (CMO:0000450)11148131282174945Rat
5684998Bss101Bone structure and strength QTL 1013.6tibia strength trait (VT:1000284)tibia ultimate force (CMO:0001734)11543162149361612Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132356093162846471Rat
5684999Bss102Bone structure and strength QTL 1025.57e-07tibia strength trait (VT:1000284)tibia stiffness (CMO:0001735)11543162149361612Rat
1300167Hrtrt2Heart rate QTL 24.35heart pumping trait (VT:2000009)heart rate (CMO:0000002)11148131275088344Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132737458199368955Rat
2313077Bss69Bone structure and strength QTL 693.50.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)11148131282174945Rat
1578756Iddm22Insulin dependent diabetes mellitus QTL 222.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)11183518156835181Rat
631508Sald1Serum aldosterone level QTL 13.7blood aldosterone amount (VT:0005346)serum aldosterone level (CMO:0000487)1985600154856001Rat
1331785Rf27Renal function QTL 274.643urine sodium amount (VT:0006274)urine sodium level (CMO:0000129)12887978078430678Rat
1300172Bp172Blood pressure QTL 1723.56arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)13273727390665040Rat
724520Bp145Blood pressure QTL 1452.10.0024arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)12078482865784828Rat
1558642Prcr2Prostate cancer resistance QTL 24.3prostate integrity trait (VT:0010571)area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)12076315844095856Rat
2313092Bmd72Bone mineral density QTL 722.50.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)11148131282174945Rat
2313097Bss70Bone structure and strength QTL 703.50.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)11148131282174945Rat
9589820Insglur3Insulin/glucose ratio QTL 310.750.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)13483685879836858Rat
738020Pia8Pristane induced arthritis QTL 84.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1165833076Rat
1600360Mcs16Mammary carcinoma susceptibility QTL 162.4mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1224439043433040Rat
1354599Bw29Body weight QTL 293.460.001body mass (VT:0001259)body weight (CMO:0000012)13344984878449848Rat
1578669Bss9Bone structure and strength QTL 96.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)150910843284926Rat
2302038Pia31Pristane induced arthritis QTL 315.50.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)11099206555992065Rat
8552948Pigfal11Plasma insulin-like growth factor 1 level QTL 114.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)13483685879836858Rat
634353Rends2Renal damage susceptibility QTL 20.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)11933357156983283Rat

Markers in Region
D1Rat16  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2142,236,821 - 42,236,969 (+)MAPPERmRatBN7.2
Rnor_6.0142,502,275 - 42,502,422NCBIRnor6.0
Rnor_5.0143,832,185 - 43,832,332UniSTSRnor5.0
RGSC_v3.4136,532,887 - 36,533,034UniSTSRGSC3.4
RGSC_v3.4136,532,886 - 36,533,034RGDRGSC3.4
RGSC_v3.1136,535,831 - 36,535,979RGD
SHRSP x BN Map120.49RGD
SHRSP x BN Map120.49UniSTS
Cytogenetic Map1p11UniSTS
RH132370  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2142,227,921 - 42,228,116 (+)MAPPERmRatBN7.2
Rnor_6.0142,493,063 - 42,493,257NCBIRnor6.0
Rnor_5.0143,822,973 - 43,823,167UniSTSRnor5.0
RGSC_v3.4136,523,987 - 36,524,181UniSTSRGSC3.4
Celera137,895,210 - 37,895,404UniSTS
Cytogenetic Map1p11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 10 49 113 58 57 26 19 26 6 167 90 93 34 53 31

Sequence


Ensembl Acc Id: ENSRNOT00000025355   ⟹   ENSRNOP00000025355
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl142,227,620 - 42,324,609 (-)Ensembl
Rnor_6.0 Ensembl142,492,761 - 42,587,721 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000083225   ⟹   ENSRNOP00000069353
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl142,494,166 - 42,587,666 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000105942   ⟹   ENSRNOP00000081513
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl142,227,070 - 42,320,253 (-)Ensembl
RefSeq Acc Id: NM_001107459   ⟹   NP_001100929
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8144,632,964 - 44,729,945 (-)NCBI
mRatBN7.2142,227,620 - 42,324,609 (-)NCBI
Rnor_6.0142,492,761 - 42,587,721 (-)NCBI
Rnor_5.0143,821,442 - 43,918,316 (-)NCBI
RGSC_v3.4136,523,685 - 36,623,005 (-)RGD
Celera137,894,908 - 37,992,338 (-)RGD
Sequence:
RefSeq Acc Id: XM_006227854   ⟹   XP_006227916
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8144,627,583 - 44,729,957 (-)NCBI
mRatBN7.2142,222,248 - 42,324,625 (-)NCBI
Rnor_6.0142,491,566 - 42,587,735 (-)NCBI
Rnor_5.0143,821,442 - 43,918,316 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006227855   ⟹   XP_006227917
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8144,627,583 - 44,729,547 (-)NCBI
mRatBN7.2142,222,248 - 42,324,235 (-)NCBI
Rnor_6.0142,491,566 - 42,587,368 (-)NCBI
Rnor_5.0143,821,442 - 43,918,316 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001100929 (Get FASTA)   NCBI Sequence Viewer  
  XP_006227916 (Get FASTA)   NCBI Sequence Viewer  
  XP_006227917 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL92837 (Get FASTA)   NCBI Sequence Viewer  
  EDL92838 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000025355.5
  ENSRNOP00000081513.1
RefSeq Acc Id: NP_001100929   ⟸   NM_001107459
- UniProtKB: F1M0G0 (UniProtKB/TrEMBL),   A6KIP2 (UniProtKB/TrEMBL),   A0A8I5ZV65 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006227916   ⟸   XM_006227854
- Peptide Label: isoform X1
- UniProtKB: F1M0G0 (UniProtKB/TrEMBL),   A6KIP2 (UniProtKB/TrEMBL),   A0A8I5ZV65 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006227917   ⟸   XM_006227855
- Peptide Label: isoform X1
- UniProtKB: F1M0G0 (UniProtKB/TrEMBL),   A6KIP2 (UniProtKB/TrEMBL),   A0A8I5ZV65 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000069353   ⟸   ENSRNOT00000083225
Ensembl Acc Id: ENSRNOP00000025355   ⟸   ENSRNOT00000025355
Ensembl Acc Id: ENSRNOP00000081513   ⟸   ENSRNOT00000105942
Protein Domains
RGS

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1M0G0-F1-model_v2 AlphaFold F1M0G0 1-210 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13689599
Promoter ID:EPDNEW_R117
Type:single initiation site
Name:Rgs17_1
Description:regulator of G-protein signaling 17
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0142,587,605 - 42,587,665EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305515 AgrOrtholog
BioCyc Gene G2FUF-61693 BioCyc
Ensembl Genes ENSRNOG00000018690 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000025355.8 UniProtKB/TrEMBL
  ENSRNOT00000105942.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.167.10 UniProtKB/TrEMBL
InterPro Regulat_G_prot_signal_superfam UniProtKB/TrEMBL
  RGS_sf UniProtKB/TrEMBL
  RGS_subdomain_2 UniProtKB/TrEMBL
KEGG Report rno:308118 UniProtKB/TrEMBL
NCBI Gene 308118 ENTREZGENE
PANTHER REGULATOR OF G PROTEIN SIGNALING UniProtKB/TrEMBL
  REGULATOR OF G-PROTEIN SIGNALING 17 UniProtKB/TrEMBL
Pfam RGS UniProtKB/TrEMBL
PhenoGen Rgs17 PhenoGen
PRINTS RGSPROTEIN UniProtKB/TrEMBL
PROSITE RGS UniProtKB/TrEMBL
RatGTEx ENSRNOG00000018690 RatGTEx
SMART RGS UniProtKB/TrEMBL
Superfamily-SCOP Regulat_G_prot_signal_superfam UniProtKB/TrEMBL
UniProt A0A8I5ZV65 ENTREZGENE, UniProtKB/TrEMBL
  A6KIP2 ENTREZGENE, UniProtKB/TrEMBL
  F1M0G0 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Rgs17  regulator of G-protein signaling 17   Rgs17_predicted  regulator of G-protein signaling 17 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Rgs17_predicted  regulator of G-protein signaling 17 (predicted)      Symbol and Name status set to approved 70820 APPROVED