Fam3d (FAM3 metabolism regulating signaling molecule D) - Rat Genome Database

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Gene: Fam3d (FAM3 metabolism regulating signaling molecule D) Rattus norvegicus
Analyze
Symbol: Fam3d
Name: FAM3 metabolism regulating signaling molecule D
RGD ID: 1305512
Description: Predicted to enable carbohydrate binding activity. Predicted to be involved in negative regulation of insulin secretion. Predicted to act upstream of or within several processes, including neutrophil homeostasis; neutrophil migration; and positive regulation of macrophage antigen processing and presentation. Predicted to be located in extracellular region and membrane. Predicted to be active in extracellular space. Orthologous to human FAM3D (FAM3 metabolism regulating signaling molecule D); INTERACTS WITH 17alpha-ethynylestradiol; 2,2',4,4'-Tetrabromodiphenyl ether; alpha-Zearalanol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: family with sequence similarity 3, member D; LOC289949; Oit1; oncoprotein induced transcript 1; oncoprotein induced transcript 1 homolog; oncoprotein induced transcript 1 homolog (mouse)
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81518,969,737 - 19,003,276 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1518,969,737 - 19,004,701 (+)EnsemblGRCr8
mRatBN7.21516,538,881 - 16,574,468 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1516,539,489 - 16,573,034 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1518,714,379 - 18,748,891 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01519,672,822 - 19,707,329 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01517,927,723 - 17,962,240 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01518,321,757 - 18,357,252 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1518,322,327 - 18,355,818 (+)Ensemblrn6Rnor6.0
Rnor_5.01522,298,428 - 22,332,832 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41518,520,414 - 18,554,410 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1516,500,332 - 16,533,427 (+)NCBICelera
RGSC_v3.11518,520,577 - 18,554,060 (+)NCBI
Cytogenetic Map15p14NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12160727  


Genomics

Comparative Map Data
Fam3d
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81518,969,737 - 19,003,276 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1518,969,737 - 19,004,701 (+)EnsemblGRCr8
mRatBN7.21516,538,881 - 16,574,468 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1516,539,489 - 16,573,034 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1518,714,379 - 18,748,891 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01519,672,822 - 19,707,329 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01517,927,723 - 17,962,240 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01518,321,757 - 18,357,252 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1518,322,327 - 18,355,818 (+)Ensemblrn6Rnor6.0
Rnor_5.01522,298,428 - 22,332,832 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41518,520,414 - 18,554,410 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1516,500,332 - 16,533,427 (+)NCBICelera
RGSC_v3.11518,520,577 - 18,554,060 (+)NCBI
Cytogenetic Map15p14NCBI
FAM3D
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38358,633,946 - 58,666,774 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl358,633,941 - 58,666,877 (-)Ensemblhg38GRCh38
GRCh37358,619,673 - 58,652,501 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36358,594,710 - 58,627,601 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34358,594,710 - 58,627,601NCBI
Celera358,633,095 - 58,666,026 (-)NCBICelera
Cytogenetic Map3p14.2NCBI
HuRef358,716,593 - 58,749,813 (-)NCBIHuRef
CHM1_1358,569,799 - 58,602,717 (-)NCBICHM1_1
T2T-CHM13v2.0358,674,325 - 58,707,258 (-)NCBIT2T-CHM13v2.0
Fam3d
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391414,091,010 - 14,120,836 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1414,091,019 - 14,120,836 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38148,348,937 - 8,378,763 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl148,348,937 - 8,378,754 (-)Ensemblmm10GRCm38
MGSCv37149,181,462 - 9,211,277 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36147,142,704 - 7,172,519 (-)NCBIMGSCv36mm8
Celera143,968,381 - 3,998,760 (-)NCBICelera
Cytogenetic Map14A1NCBI
cM Map144.83NCBI
Fam3d
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554301,541,751 - 1,571,654 (+)Ensembl
ChiLan1.0NW_0049554301,541,896 - 1,569,391 (+)NCBIChiLan1.0ChiLan1.0
FAM3D
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2258,596,316 - 58,621,822 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1358,602,988 - 58,626,597 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0358,564,083 - 58,685,370 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1359,973,276 - 60,005,003 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl359,973,612 - 59,993,727 (-)EnsemblpanPan2panpan1.1
FAM3D
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12032,013,920 - 32,040,599 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2032,013,974 - 32,040,490 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2031,929,663 - 31,965,753 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02032,248,054 - 32,284,155 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2032,257,503 - 32,284,042 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12031,728,849 - 31,764,900 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02032,084,664 - 32,120,720 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02032,256,886 - 32,292,967 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Fam3d
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118169,264,118 - 169,294,029 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364732,402,652 - 2,433,002 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364732,402,713 - 2,432,589 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FAM3D
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11340,375,536 - 40,456,057 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21344,466,780 - 44,516,712 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FAM3D
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12219,929,632 - 19,964,541 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2219,929,635 - 19,963,201 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666041146,869,133 - 146,891,600 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fam3d
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248225,628,074 - 5,652,414 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248225,630,511 - 5,652,267 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Fam3d
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11278,758,553 - 78,792,930 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Fam3d
248 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:241
Count of miRNA genes:161
Interacting mature miRNAs:180
Transcripts:ENSRNOT00000009650
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1641913Colcr2Colorectal carcinoma resistance QTL 26.570.0197intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)15231575947315759Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)15278592347785923Rat
5684946Bss98Bone structure and strength QTL 983.90.0026tibia strength trait (VT:1000284)tibia ultimate force (CMO:0001734)15139411584Rat
1354657Despr13Despair related QTL 130.0022locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)15132342855Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151492659471614418Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15144836456Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15231575953331089Rat
5685002Bss103Bone structure and strength QTL 1032.8tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)151691152132439851Rat

Markers in Region
RH134413  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21516,572,788 - 16,572,980 (+)MAPPERmRatBN7.2
Rnor_6.01518,355,573 - 18,355,764NCBIRnor6.0
Rnor_5.01522,331,153 - 22,331,344UniSTSRnor5.0
RGSC_v3.41518,554,165 - 18,554,356UniSTSRGSC3.4
Celera1516,533,182 - 16,533,373UniSTS
RH 3.4 Map15138.0UniSTS
Cytogenetic Map15p14UniSTS
AV067083  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21516,572,780 - 16,572,865 (+)MAPPERmRatBN7.2
Rnor_6.01518,355,565 - 18,355,649NCBIRnor6.0
Rnor_5.01522,331,145 - 22,331,229UniSTSRnor5.0
RGSC_v3.41518,554,157 - 18,554,241UniSTSRGSC3.4
Celera1516,533,174 - 16,533,258UniSTS
Cytogenetic Map15p14UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 8 60 73 81 80 49 32 49 6 266 113 56 81 91 31 7 7

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001106027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_197210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006251752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006251753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039093090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039093091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039093092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039093094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039093095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH474010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000009650   ⟹   ENSRNOP00000009650
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1518,969,737 - 19,003,276 (+)Ensembl
mRatBN7.2 Ensembl1516,539,489 - 16,573,034 (+)Ensembl
Rnor_6.0 Ensembl1518,322,327 - 18,355,818 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000085822   ⟹   ENSRNOP00000070295
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1518,980,323 - 19,003,267 (+)Ensembl
mRatBN7.2 Ensembl1516,539,489 - 16,573,034 (+)Ensembl
Rnor_6.0 Ensembl1518,332,910 - 18,355,785 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000132160   ⟹   ENSRNOP00000101390
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1518,980,415 - 19,004,701 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000141815   ⟹   ENSRNOP00000112624
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1518,994,636 - 19,004,701 (+)Ensembl
RefSeq Acc Id: NM_001106027   ⟹   NP_001099497
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81518,969,737 - 19,003,276 (+)NCBI
mRatBN7.21516,539,489 - 16,573,034 (+)NCBI
Rnor_6.01518,322,327 - 18,355,818 (+)NCBI
Rnor_5.01522,298,428 - 22,332,832 (+)NCBI
RGSC_v3.41518,520,414 - 18,554,410 (+)RGD
Celera1516,500,332 - 16,533,427 (+)RGD
Sequence:
RefSeq Acc Id: XM_006251752   ⟹   XP_006251814
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81518,969,743 - 19,003,268 (+)NCBI
mRatBN7.21516,538,881 - 16,574,468 (+)NCBI
Rnor_6.01518,321,757 - 18,357,252 (+)NCBI
Rnor_5.01522,298,428 - 22,332,832 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017599610   ⟹   XP_017455099
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81518,976,804 - 19,003,268 (+)NCBI
mRatBN7.21516,550,145 - 16,574,468 (+)NCBI
Rnor_6.01518,331,505 - 18,357,252 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017599611   ⟹   XP_017455100
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81518,992,265 - 19,003,268 (+)NCBI
mRatBN7.21516,562,020 - 16,574,468 (+)NCBI
Rnor_6.01518,344,808 - 18,357,252 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039093090   ⟹   XP_038949018
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81518,976,804 - 19,003,268 (+)NCBI
mRatBN7.21516,550,145 - 16,574,468 (+)NCBI
RefSeq Acc Id: XM_039093091   ⟹   XP_038949019
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81518,976,804 - 19,003,268 (+)NCBI
mRatBN7.21516,550,145 - 16,574,468 (+)NCBI
RefSeq Acc Id: XM_039093092   ⟹   XP_038949020
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81518,988,216 - 19,003,268 (+)NCBI
mRatBN7.21516,557,973 - 16,574,468 (+)NCBI
RefSeq Acc Id: XM_039093094   ⟹   XP_038949022
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81518,976,804 - 19,000,683 (+)NCBI
mRatBN7.21516,550,145 - 16,570,441 (+)NCBI
RefSeq Acc Id: XM_039093095   ⟹   XP_038949023
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81518,993,801 - 19,003,268 (+)NCBI
mRatBN7.21516,563,540 - 16,574,468 (+)NCBI
RefSeq Acc Id: XM_063274082   ⟹   XP_063130152
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81518,981,275 - 19,003,268 (+)NCBI
RefSeq Acc Id: NP_001099497   ⟸   NM_001106027
- Sequence:
RefSeq Acc Id: XP_006251814   ⟸   XM_006251752
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017455099   ⟸   XM_017599610
- Peptide Label: isoform X2
- UniProtKB: A0A0G2JXJ3 (UniProtKB/TrEMBL),   A6K0A8 (UniProtKB/TrEMBL),   D3ZZ49 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017455100   ⟸   XM_017599611
- Peptide Label: isoform X3
- UniProtKB: A6K0A8 (UniProtKB/TrEMBL),   D3ZZ49 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000070295   ⟸   ENSRNOT00000085822
Ensembl Acc Id: ENSRNOP00000009650   ⟸   ENSRNOT00000009650
RefSeq Acc Id: XP_038949019   ⟸   XM_039093091
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038949018   ⟸   XM_039093090
- Peptide Label: isoform X1
- UniProtKB: A6K0A8 (UniProtKB/TrEMBL),   D3ZZ49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038949022   ⟸   XM_039093094
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038949020   ⟸   XM_039093092
- Peptide Label: isoform X3
- UniProtKB: A6K0A8 (UniProtKB/TrEMBL),   D3ZZ49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038949023   ⟸   XM_039093095
- Peptide Label: isoform X5
- UniProtKB: A6K0B0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063130152   ⟸   XM_063274082
- Peptide Label: isoform X2
Ensembl Acc Id: ENSRNOP00000101390   ⟸   ENSRNOT00000132160
Ensembl Acc Id: ENSRNOP00000112624   ⟸   ENSRNOT00000141815
Protein Domains
ILEI/PANDER

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2JXJ3-F1-model_v2 AlphaFold A0A0G2JXJ3 1-223 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305512 AgrOrtholog
BioCyc Gene G2FUF-14303 BioCyc
Ensembl Genes ENSRNOG00000007320 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000009650.8 UniProtKB/TrEMBL
  ENSRNOT00000085822 ENTREZGENE
  ENSRNOT00000085822.3 UniProtKB/TrEMBL
  ENSRNOT00000132160 ENTREZGENE
  ENSRNOT00000132160.1 UniProtKB/TrEMBL
  ENSRNOT00000141815.1 UniProtKB/TrEMBL
InterPro FAM3 UniProtKB/TrEMBL
  ILEI/PANDER_dom UniProtKB/TrEMBL
  ILEI_FAM3C UniProtKB/TrEMBL
KEGG Report rno:289949 UniProtKB/TrEMBL
NCBI Gene 289949 ENTREZGENE
PANTHER PTHR14592 UniProtKB/TrEMBL
Pfam ILEI UniProtKB/TrEMBL
PhenoGen Fam3d PhenoGen
PROSITE GG_LECTIN UniProtKB/TrEMBL
RatGTEx ENSRNOG00000007320 RatGTEx
UniProt A0A0G2JXJ3 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0L0B7_RAT UniProtKB/TrEMBL
  A0ABK0M8X9_RAT UniProtKB/TrEMBL
  A6K0A8 ENTREZGENE, UniProtKB/TrEMBL
  A6K0B0 ENTREZGENE, UniProtKB/TrEMBL
  D3ZZ49 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-10-04 Fam3d  FAM3 metabolism regulating signaling molecule D  Fam3d  family with sequence similarity 3, member D  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-11-14 Fam3d  family with sequence similarity 3, member D  Oit1  oncoprotein induced transcript 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-06 Oit1  oncoprotein induced transcript 1  Oit1_predicted  oncoprotein induced transcript 1 homolog (mouse) (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-30 Oit1_predicted  oncoprotein induced transcript 1 homolog (mouse) (predicted)    oncoprotein induced transcript 1 (predicted)  Name updated 1299863 APPROVED
2005-01-12 Oit1_predicted  oncoprotein induced transcript 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED