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Gene: L3mbtl3 (L3MBTL histone methyl-lysine binding protein 3) Rattus norvegicus

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Symbol:

L3mbtl3

Name:

L3MBTL histone methyl-lysine binding protein 3

RGD ID:

1305474

Description:

Predicted to enable several functions, including histone binding activity; identical protein binding activity; and methylation-dependent protein binding activity. Predicted to be involved in negative regulation of DNA-templated transcription; negative regulation of transcription initiation-coupled chromatin remodeling; and positive regulation of ubiquitin-dependent protein catabolic process. Predicted to act upstream of or within erythrocyte maturation; granulocyte differentiation; and macrophage differentiation. Predicted to be active in nucleus. Orthologous to human L3MBTL3 (L3MBTL histone methyl-lysine binding protein 3); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

l(3)mbt-like 3; l(3)mbt-like 3 (Drosophila); L3MBTL3, histone methyl-lysine binding protein; lethal(3)malignant brain tumor-like protein 3; LOC309550

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	20,807,679 - 20,908,609 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	20,808,973 - 20,908,608 (+)	Ensembl				GRCr8
mRatBN7.2	1	18,988,763 - 19,089,247 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	18,990,618 - 19,089,263 (+)	Ensembl				mRatBN7.2
Rnor_6.0	1	19,998,776 - 20,097,298 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	20,022,793 - 20,097,099 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	21,485,938 - 21,584,635 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	19,444,845 - 19,545,412 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	17,383,083 - 17,480,930 (+)	NCBI		Celera
RGSC_v3.1	1	19,469,790 - 19,543,825 (+)	NCBI
Cytogenetic Map	1	p12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Breast Neoplasms (ISO)

medulloblastoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

(1->4)-beta-D-glucan (ISO)

17beta-estradiol (EXP)

17beta-hydroxy-5alpha-androstan-3-one (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-diaminotoluene (ISO)

2,6-dinitrotoluene (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

8-Br-cAMP (ISO)

acrylamide (EXP)

amitrole (EXP)

amphetamine (EXP)

atrazine (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (EXP,ISO)

calcitriol (ISO)

cobalt dichloride (EXP,ISO)

dexamethasone (ISO)

dimethylarsinic acid (ISO)

flutamide (EXP)

FR900359 (ISO)

gardiquimod (ISO)

gentamycin (EXP)

indometacin (ISO)

lipopolysaccharide (ISO)

methimazole (EXP)

methyl methanesulfonate (ISO)

methylarsonic acid (ISO)

nitrates (ISO)

okadaic acid (ISO)

oxaliplatin (EXP)

p-toluidine (EXP)

paracetamol (EXP,ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

potassium chromate (ISO)

protein kinase inhibitor (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

thioacetamide (EXP)

titanium dioxide (ISO)

topotecan (EXP)

trichloroethene (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

tungsten (ISO)

urethane (ISO)

valproic acid (ISO)

vinclozolin (EXP)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chromatin organization (IEA)

erythrocyte maturation (ISO)

granulocyte differentiation (ISO)

macrophage differentiation (ISO)

myeloid cell differentiation (ISO)

negative regulation of DNA-templated transcription (IBA,IEA,ISO)

negative regulation of transcription initiation-coupled chromatin remodeling (IEA,ISO)

positive regulation of ubiquitin-dependent protein catabolic process (IEA,ISO)

regulation of DNA-templated transcription (IEA)

regulation of ubiquitin-dependent protein catabolic process (IEA,ISO)

Cellular Component

nucleolus (IEA,ISO)

nucleoplasm (IEA,ISO)

nucleus (IBA,IEA,ISO)

Molecular Function

chromatin binding (IBA,IEA,ISO)

histone binding (IBA)

identical protein binding (IEA,ISO)

metal ion binding (IEA)

methylation-dependent protein binding (IEA,ISO)

protein binding (ISO)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:15889154	PMID:21516116	PMID:25416956	PMID:31515488

Genomics

Comparative Map Data

L3mbtl3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	20,807,679 - 20,908,609 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	20,808,973 - 20,908,608 (+)	Ensembl				GRCr8
mRatBN7.2	1	18,988,763 - 19,089,247 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	18,990,618 - 19,089,263 (+)	Ensembl				mRatBN7.2
Rnor_6.0	1	19,998,776 - 20,097,298 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	20,022,793 - 20,097,099 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	21,485,938 - 21,584,635 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	19,444,845 - 19,545,412 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	17,383,083 - 17,480,930 (+)	NCBI		Celera
RGSC_v3.1	1	19,469,790 - 19,543,825 (+)	NCBI
Cytogenetic Map	1	p12	NCBI

L3MBTL3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	130,018,581 - 130,141,438 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	130,013,699 - 130,141,449 (+)	Ensembl			hg38	GRCh38
GRCh37	6	130,339,726 - 130,462,583 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	130,381,427 - 130,504,278 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	6	131,086,140 - 131,209,005 (+)	NCBI		Celera
Cytogenetic Map	6	q23.1	NCBI
HuRef	6	127,920,637 - 128,043,565 (+)	NCBI		HuRef
CHM1_1	6	130,603,269 - 130,725,909 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	131,211,018 - 131,336,219 (+)	NCBI		T2T-CHM13v2.0

L3mbtl3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	26,150,361 - 26,252,426 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	26,150,366 - 26,251,967 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	10	26,274,461 - 26,376,036 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	26,274,468 - 26,375,971 (-)	Ensembl			mm10	GRCm38
MGSCv37	10	25,995,258 - 26,094,991 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	10	25,964,868 - 26,064,601 (-)	NCBI		MGSCv36	mm8
Celera	10	27,193,880 - 27,270,781 (-)	NCBI		Celera
Cytogenetic Map	10	A4	NCBI
cM Map	10	13.67	NCBI

L3mbtl3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955436	10,920,075 - 11,013,520 (+)	Ensembl
ChiLan1.0	NW_004955436	10,900,521 - 11,014,259 (+)	NCBI	ChiLan1.0	ChiLan1.0

L3MBTL3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	150,020,803 - 150,144,174 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	147,927,572 - 148,050,961 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	127,814,847 - 127,938,220 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	131,922,749 - 132,045,708 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	131,922,967 - 132,045,708 (+)	Ensembl			panPan2	panpan1.1

L3MBTL3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	68,538,014 - 68,655,173 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	68,540,051 - 68,654,414 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	69,285,438 - 69,406,207 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	68,750,223 - 68,871,355 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	68,750,220 - 68,871,355 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	68,672,285 - 68,792,952 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	68,453,457 - 68,574,266 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	69,099,478 - 69,220,430 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

L3mbtl3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	118,663,924 - 118,751,667 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936790	1,212,536 - 1,298,566 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936790	1,210,842 - 1,298,577 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

L3MBTL3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	33,198,301 - 33,319,399 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	33,198,295 - 33,319,477 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	36,632,452 - 36,730,862 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

L3MBTL3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	43,428,693 - 43,554,996 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	13	43,428,694 - 43,554,972 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666040	15,565,415 - 15,687,873 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

L3mbtl3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624753	4,326,748 - 4,414,957 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624753	4,304,787 - 4,415,684 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

L3mbtl3
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	2	212,300,236 - 212,400,607 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in L3mbtl3
739 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	173
Count of miRNA genes:	95
Interacting mature miRNAs:	102
Transcripts:	ENSRNOT00000015730, ENSRNOT00000061404
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2313090	Bmd69	Bone mineral density QTL 69	4.4	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	1	5293229	34184556	Rat
631688	Hcas2	Hepatocarcinoma susceptibility QTL 2	3	0.0001	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	7746118	52746118	Rat
4889451	Eae29	Experimental allergic encephalomyelitis QTL 29	5.51		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	1	7746121	52746121	Rat
70179	Xhs2	X-ray hypersensitivity QTL 2	3.2		intestine integrity trait (VT:0010554)	post-insult time to onset of moribundity (CMO:0001896)	1	1	43965634	Rat
1354647	Despr8	Despair related QTL 8		0.0000341	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	1	1	26564886	Rat
1558642	Prcr2	Prostate cancer resistance QTL 2	4.3		prostate integrity trait (VT:0010571)	area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)	1	10379492	55379492	Rat
7421626	Bp360	Blood pressure QTL 360		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	6941022	51941022	Rat
2313070	Bss52	Bone structure and strength QTL 52	4.4	0.0001	body length (VT:0001256)	body length (CMO:0000013)	1	5293229	34184556	Rat
1357401	Bw43	Body weight QTL 43	3.75		body mass (VT:0001259)	body weight (CMO:0000012)	1	6909353	51909353	Rat
631494	Bp95	Blood pressure QTL 95	40	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	17315378	51816258	Rat
1600360	Mcs16	Mammary carcinoma susceptibility QTL 16	2.4		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	1	1	26564886	Rat
5684998	Bss101	Bone structure and strength QTL 101	3.6		tibia strength trait (VT:1000284)	tibia ultimate force (CMO:0001734)	1	6909353	51909353	Rat
5684999	Bss102	Bone structure and strength QTL 102	5.5	7e-07	tibia strength trait (VT:1000284)	tibia stiffness (CMO:0001735)	1	6909353	51909353	Rat
2302038	Pia31	Pristane induced arthritis QTL 31	5.5	0.001	blood autoantibody amount (VT:0003725)	serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)	1	12820494	57820494	Rat
2317755	Glom22	Glomerulus QTL 22	3.8		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	1	1	34184556	Rat
634353	Rends2	Renal damage susceptibility QTL 2		0.05	kidney blood vessel morphology trait (VT:0000530)	organ lesion measurement (CMO:0000677)	1	20656420	65656420	Rat
1300170	Rf6	Renal function QTL 6	3.14		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	1	1	28483164	Rat
1578756	Iddm22	Insulin dependent diabetes mellitus QTL 22	2.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	20508326	65508326	Rat
631508	Sald1	Serum aldosterone level QTL 1	3.7		blood aldosterone amount (VT:0005346)	serum aldosterone level (CMO:0000487)	1	11684464	56684464	Rat
2313053	Bss51	Bone structure and strength QTL 51	3.8	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	1	5293229	34184556	Rat

Markers in Region

BF410282

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	18,991,731 - 18,991,922 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	20,000,842 - 20,001,032	NCBI	Rnor6.0
Rnor_5.0	1	21,488,734 - 21,488,924	UniSTS	Rnor5.0
RGSC_v3.4	1	19,447,182 - 19,447,372	UniSTS	RGSC3.4
Celera	1	17,383,437 - 17,383,627	UniSTS
RH 3.4 Map	1	178.9	UniSTS
Cytogenetic Map	1	p12	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
21	13	82	215	91	90	59	157	59	6	483	282	22	193	113	124	31	34	34

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001432316	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432318	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432319	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432320	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432321	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003748666	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003753137	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006227695	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006227696	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006227697	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006227698	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006227699	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008758644	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588106	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589838	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039098994	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039098995	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039098996	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039098998	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099000	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276392	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276402	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063276409	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473994	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ226752	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000061404 ⟹ ENSRNOP00000058121

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	20,808,973 - 20,908,607 (+)	Ensembl
mRatBN7.2 Ensembl	1	18,992,651 - 19,089,263 (+)	Ensembl
Rnor_6.0 Ensembl	1	20,022,793 - 20,097,099 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000107555 ⟹ ENSRNOP00000092290

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	20,810,025 - 20,908,608 (+)	Ensembl
mRatBN7.2 Ensembl	1	18,990,756 - 19,089,263 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000118212 ⟹ ENSRNOP00000083485

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	20,810,025 - 20,908,608 (+)	Ensembl
mRatBN7.2 Ensembl	1	18,990,618 - 19,089,263 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000118227 ⟹ ENSRNOP00000090170

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	20,810,025 - 20,908,608 (+)	Ensembl
mRatBN7.2 Ensembl	1	18,990,756 - 19,089,263 (+)	Ensembl

RefSeq Acc Id:

XM_003748666 ⟹ XP_003748714

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	20,810,257 - 20,908,609 (+)	NCBI
mRatBN7.2	1	18,990,613 - 19,089,247 (+)	NCBI
Rnor_6.0	1	19,999,759 - 20,097,298 (+)	NCBI
Rnor_5.0	1	21,485,938 - 21,584,635 (+)	NCBI

Sequence:

show sequence

CCAGCCAGCCGCCGGCCGGAGGAGGAGGCAAACTTGAGAGCGGCGGGGCCAGGGGCGCGCTTGA
GGAGGGAAAACTTTAATCGCCTTCTCGGGAAAAAAAAAAAAAGAAAAAATCCAAAAGACAAAAA
AGTGCGTGTGTATGTGTGTAGGGTTCTAGGATCCGAACCCCACGATCGGATCGGATCTGATCCG
ATCACGGCCCACCGCGGGGCCGTGAGAGAAAGTTGACCAGCGGGACGGCTTTCTCTGCGCCCGG
CTCGCGTCTGGCCGAGGTGTCTGTCTGTCAGTCCGCGCTCCGACACAACAGGGGTGGGAGATCC
AGCCGCACTGCCCGGTCGCGTGGGTCAGGGCTCTTGCCCCACCCTTCCACGGGGACACGAAGAT
CCTTAAAAGAAGTCTTGGGGGTACACAGCAGTTCTGAAGGCCACCAGGCAGTTCCGTCTTTCTT
CACCACGGCCTCGAGGCTACCAGGTAAATCATGACTGAATCTTCATCTACCACAAGTGGTCAAG
AGTTTGATGTGTTCAGTGTTATGGACTGGAAGGATGGCGTTGGTACCCTACCAGGAAGTGATTT
GAAGTTTAGGGTAAATGAATTCGGAGCTTTGGAAGTTATCACAGACGAAAGCGAGATGGAAAGT
GTGAAGAAAGCAACAGCCACTACCACGTGGATGGTCCCAACTGCTCAGGACGCCCCGCCCTCTC
CCCTGAGCTCCAGGCCCGCATTTCCACCTGCCTACTGGACATCTCCACCCGGATGTCCCACAGT
CTTTTCAGAGAAGACTGGGGTACCCTTCAGGCTGAAGGAGCAGTCGAAAGTAGATGGGCTCCAG
TTTTGTGAGAACTGTTGTCAGTATGGCAACGGAGAGGAGTGTCTTTCTGGAGGGAACTATTGCA
GCCAGAACTGTTCACGGCGTGCCAGAGACAAAGATCAGAAGGAAGACCGAGATGGAGGCGAGGA
CAATGACGAGGAGGATCCTAAGTGTAGTCGGAAGAAAAAACCAAAATTATCTCTGAAGGCTGAC
TCCAAGGAAGATGAAGAGAGAGATGATGAAATGGAGAACAAACAAGATGGAAGGATCCTGAGGG
GTTCTCAGAGAGCCAGAAGGAAAAGACGTGGGGATTCAGCCGTCTTAAAGCAGGGCTTGCCTCC
TAAAGGCAAGAAAACCTGGTGCTGGGCATCCTACCTAGAGGAGGAGAAAGCTGTGGCAGTGCCG
ACGAAGCTGTTCAAAGAGCACCAGTCCTTCCCATACAACAAAAATGGATTCAAAGTCGGCATGA
AGCTAGAAGGTGTGGACCCTGAGCACCAGTCTGTGTACTGTGTCCTCACTGTGGCTGAGGTTTG
TGGATATAGGATAAAGCTTCACTTTGATGGATATTCTGACTGCTACGACTTCTGGGTAAACGCC
GATGCTTTGGACATTCACCCCGTGGGCTGGTGTGAGAAGACTGGTCATAAGCTCCGCCCTCCTA
AAGGCTATAAAGAAGAAGAATTTAATTGGCAGTCCTACCTTAAGACGTGCAAAGCCCAGGCTGC
TCCCAAGTCATTATTTGAAAATCAGAACATAACAGTGATCCCGTCAGGTTTTCGAGTTGGAATG
AAGCTCGAGGCTGCAGACAAAAAGAGTCCTTCCATTATCTGCGTTGCTACGGTAACAGATATGG
TGGACAACCGTTTCCTGGTCCATTTTGACAACTGGGACGAGAGCTATGACTATTGGTGCGAATC
AAACAGCCCACATATTCATCCAGTCGGATGGTGTAAAGAACACAGAAGAACACTGATTACACCA
CCAGGCTATTCGCATGTGAAACACTTTTCCTGGGATAAATATCTAGAAGAGACCAATTCTTTAC
CTGCTCCTGCAAGAGCTTTCAAAGTGAAACCTCCACATGGATTCCAGAAAAAAATGAAGCTTGA
GGCTGTGGACAAAAGAAACCCACTGTTCATCAGAGTAGCAACGGTAGCAGACACGGATGATCAC
CGGATAAAAGTTCACTTTGATGGCTGGAGCAGTTGCTATGACTACTGGATTGACGCAGACTCTC
CGGATATTCACCCTGTAGGCTGGTGTTCCAAGACCGGACACCCTCTTCAGGCTCCGCTAAGCCC
TGCAGAATTAATGGAACCGTCAGAAACTGGGGGCTGTCCAACCCTAGGCTGTAGGGGAGTTGGT
CATTTTAAAAAATCGAGGTACCTGGGCACTCAGAGTGGTGCCAACTGTCCCTATTCAGAAATCA
ACTTGAGTAAAGACCGCATCTTCCCCGACCGTCTAAGTGGTGAGATAACCCCATCCAGTTTCTC
ATTCCCAAGAAGTAAAAGGACAGACACCAATGAAAGTTCATCATCCCCGGAAACCAGGGACCAG
CATGCCAATAATGTCAAAGAAGATTCTGAAAAGAAAAAAGAAAATGAAGTAAAGACATCAGCCG
AAGCCAAAGTTGTTCGGGAAGAGCCTACCCCCAGCGTACAGCAGACTCAGCCACCTCAGCAGGC
ACTAAAGGCTCCGCAAGCTCCACAGATCCAGCCAGCCCAGCAGGCCCCACAGGCACCGCAGGCT
CAGCCAACCCAGCAGCAGGCCCAGCAGGCTCAGCAGGCCCCACAGGCACCGCAGGCCCAGCCGG
CCCCACAGGCCCCGCAGACCCATCCAACCCAGCAGCAGGCCCAACAGGCCCAGCCAACCCAGCA
GCAGGCCCAGCAGGCCCAGCCAACCCAGCAGCAGCAGGCCCAGCAGCAGGCCCAGAGGCGCTCA
GCTGTATTTCTCTCCTTTAAGCCTCCAATTCCATGTCTGCCCCTGCGCTGGGAGCAACAGAGCA
AGCTTCTTCCAACTGTTGCTGGGATCCCGGCGAGTCGAGTTTCCAAGTGGAGCACAGACGAGGT
GTCAGAATTCATTCAGAGTTTGCCCGGATGTGAAGAACATGGAAAGGTGTTTAAGGATGAACAA
ATTGATGGAGAAGCATTTTTACTGATGACCCAGACAGACATTGTTAAAATTATGAGCATTAAGC
TGGGCCCAGCTCTCAAAATTTTCAATTCTATTCTGATGTTCAAAGCCGCGGAGAAGAATTCCCA
CAACGAACTGTGAAGACGGTGAATTCTGGCACCATCGGCTTCTGCTTTATAGCTCATTATGTTC
TTTCAAAGCACAAGGACAGCTCCGGCTCTGGAGTGAGGAGTCTTCGGAATTCCCAGGGGCAGCA
CTACAGGGCCCATGGGTCCCTCCAGCTGCAGACACATTCTTAGGGAATGCCCAAGCTTCTTACC
AGCAACTGGCCAACAGCAGTCACCTTTGGTTCCGCTCACCGAGCTAAACTTAACCTTTGTAAAT
TTTTTGGATGTGGGAGGAGGGTGGGGAGAGGGAGGCTTCGTTATTTATGGATGGGGCAAAAATC
AGAACTTTTGGCATTTTGTAAACATTGTCGGAGTCTCTTTCATGTACACTTTCTTTTTTTTTTT
TTTTTCAATATTTTCAGAAACCTTTT

hide sequence

RefSeq Acc Id:

XM_006227695 ⟹ XP_006227757

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	20,808,202 - 20,908,609 (+)	NCBI
mRatBN7.2	1	18,988,844 - 19,089,247 (+)	NCBI
Rnor_6.0	1	19,998,778 - 20,097,298 (+)	NCBI
Rnor_5.0	1	21,485,938 - 21,584,635 (+)	NCBI

Sequence:

show sequence

ACTCTACGCGCACATGCGCACTGCGCCCGCAGCCCTGGACCATTTGTCAGGACTACTCGTGAGA
CGGAGAAAAAAAAAAGAGAGAAAATTTGGGGATCCTTAAAAGAAGTCTTGGGGGTACACAGCAG
TTCTGAAGGCCACCAGGCAGTTCCGTCTTTCTTCACCACGGCCTCGAGGCTACCAGGTAAATCA
TGACTGAATCTTCATCTACCACAAGTGGTCAAGAGTTTGATGTGTTCAGTGTTATGGACTGGAA
GGATGGCGTTGGTACCCTACCAGGAAGTGATTTGAAGTTTAGGGTAAATGAATTCGGAGCTTTG
GAAGTTATCACAGACGAAAGCGAGATGGAAAGTGTGAAGAAAGCAACAGCCACTACCACGTGGA
TGGTCCCAACTGCTCAGGACGCCCCGCCCTCTCCCCTGAGCTCCAGGCCCGCATTTCCACCTGC
CTACTGGACATCTCCACCCGGATGTCCCACAGTCTTTTCAGAGAAGACTGGGGTACCCTTCAGG
CTGAAGGAGCAGTCGAAAGTAGATGGGCTCCAGTTTTGTGAGAACTGTTGTCAGTATGGCAACG
GAGAGGAGTGTCTTTCTGGAGGGAACTATTGCAGCCAGAACTGTTCACGGCGTGCCAGAGACAA
AGATCAGAAGGAAGACCGAGATGGAGGCGAGGACAATGACGAGGAGGATCCTAAGTGTAGTCGG
AAGAAAAAACCAAAATTATCTCTGAAGGCTGACTCCAAGGAAGATGAAGAGAGAGATGATGAAA
TGGAGAACAAACAAGATGGAAGGATCCTGAGGGGTTCTCAGAGAGCCAGAAGGAAAAGACGTGG
GGATTCAGCCGTCTTAAAGCAGGGCTTGCCTCCTAAAGGCAAGAAAACCTGGTGCTGGGCATCC
TACCTAGAGGAGGAGAAAGCTGTGGCAGTGCCGACGAAGCTGTTCAAAGAGCACCAGTCCTTCC
CATACAACAAAAATGGATTCAAAGTCGGCATGAAGCTAGAAGGTGTGGACCCTGAGCACCAGTC
TGTGTACTGTGTCCTCACTGTGGCTGAGGTTTGTGGATATAGGATAAAGCTTCACTTTGATGGA
TATTCTGACTGCTACGACTTCTGGGTAAACGCCGATGCTTTGGACATTCACCCCGTGGGCTGGT
GTGAGAAGACTGGTCATAAGCTCCGCCCTCCTAAAGGCTATAAAGAAGAAGAATTTAATTGGCA
GTCCTACCTTAAGACGTGCAAAGCCCAGGCTGCTCCCAAGTCATTATTTGAAAATCAGAACATA
ACAGTGATCCCGTCAGGTTTTCGAGTTGGAATGAAGCTCGAGGCTGCAGACAAAAAGAGTCCTT
CCATTATCTGCGTTGCTACGGTAACAGATATGGTGGACAACCGTTTCCTGGTCCATTTTGACAA
CTGGGACGAGAGCTATGACTATTGGTGCGAATCAAACAGCCCACATATTCATCCAGTCGGATGG
TGTAAAGAACACAGAAGAACACTGATTACACCACCAGGCTATTCGCATGTGAAACACTTTTCCT
GGGATAAATATCTAGAAGAGACCAATTCTTTACCTGCTCCTGCAAGAGCTTTCAAAGTGAAACC
TCCACATGGATTCCAGAAAAAAATGAAGCTTGAGGCTGTGGACAAAAGAAACCCACTGTTCATC
AGAGTAGCAACGGTAGCAGACACGGATGATCACCGGATAAAAGTTCACTTTGATGGCTGGAGCA
GTTGCTATGACTACTGGATTGACGCAGACTCTCCGGATATTCACCCTGTAGGCTGGTGTTCCAA
GACCGGACACCCTCTTCAGGCTCCGCTAAGCCCTGCAGAATTAATGGAACCGTCAGAAACTGGG
GGCTGTCCAACCCTAGGCTGTAGGGGAGTTGGTCATTTTAAAAAATCGAGGTACCTGGGCACTC
AGAGTGGTGCCAACTGTCCCTATTCAGAAATCAACTTGAGTAAAGACCGCATCTTCCCCGACCG
TCTAAGTGGTGAGATAACCCCATCCAGTTTCTCATTCCCAAGAAGTAAAAGGACAGACACCAAT
GAAAGTTCATCATCCCCGGAAACCAGGGACCAGCATGCCAATAATGTCAAAGAAGATTCTGAAA
AGAAAAAAGAAAATGAAGTAAAGACATCAGCCGAAGCCAAAGTTGTTCGGGAAGAGCCTACCCC
CAGCGTACAGCAGACTCAGCCACCTCAGCAGGCACTAAAGGCTCCGCAAGCTCCACAGATCCAG
CCAGCCCAGCAGGCCCCACAGGCACCGCAGGCTCAGCCAACCCAGCAGCAGGCCCAGCAGGCTC
AGCAGGCCCCACAGGCACCGCAGGCCCAGCCGGCCCCACAGGCCCCGCAGACCCATCCAACCCA
GCAGCAGGCCCAACAGGCCCAGCCAACCCAGCAGCAGGCCCAGCAGGCCCAGCCAACCCAGCAG
CAGCAGGCCCAGCAGCAGGCCCAGAGGCGCTCAGCTGTATTTCTCTCCTTTAAGCCTCCAATTC
CATGTCTGCCCCTGCGCTGGGAGCAACAGAGCAAGCTTCTTCCAACTGTTGCTGGGATCCCGGC
GAGTCGAGTTTCCAAGTGGAGCACAGACGAGGTGTCAGAATTCATTCAGAGTTTGCCCGGATGT
GAAGAACATGGAAAGGTGTTTAAGGATGAACAAATTGATGGAGAAGCATTTTTACTGATGACCC
AGACAGACATTGTTAAAATTATGAGCATTAAGCTGGGCCCAGCTCTCAAAATTTTCAATTCTAT
TCTGATGTTCAAAGCCGCGGAGAAGAATTCCCACAACGAACTGTGAAGACGGTGAATTCTGGCA
CCATCGGCTTCTGCTTTATAGCTCATTATGTTCTTTCAAAGCACAAGGACAGCTCCGGCTCTGG
AGTGAGGAGTCTTCGGAATTCCCAGGGGCAGCACTACAGGGCCCATGGGTCCCTCCAGCTGCAG
ACACATTCTTAGGGAATGCCCAAGCTTCTTACCAGCAACTGGCCAACAGCAGTCACCTTTGGTT
CCGCTCACCGAGCTAAACTTAACCTTTGTAAATTTTTTGGATGTGGGAGGAGGGTGGGGAGAGG
GAGGCTTCGTTATTTATGGATGGGGCAAAAATCAGAACTTTTGGCATTTTGTAAACATTGTCGG
AGTCTCTTTCATGTACACTTTCTTTTTTTTTTTTTTTTCAATATTTTCAGAAACCTTTT

hide sequence

RefSeq Acc Id:

XM_006227696 ⟹ XP_006227758

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	20,807,679 - 20,908,609 (+)	NCBI
mRatBN7.2	1	18,988,763 - 19,089,247 (+)	NCBI
Rnor_6.0	1	19,998,776 - 20,097,298 (+)	NCBI
Rnor_5.0	1	21,485,938 - 21,584,635 (+)	NCBI

Sequence:

show sequence

TGACTCTACGCGCACATGCGCACTGCGCCCGCAGCCCTGGACCATTTGTCAGGACTACTCGTGA
GACGGAGAAAAAAAAAAGAGAGAAAATTTGGGGGCTACCAGGTAAATCATGACTGAATCTTCAT
CTACCACAAGTGGTCAAGAGTTTGATGTGTTCAGTGTTATGGACTGGAAGGATGGCGTTGGTAC
CCTACCAGGAAGTGATTTGAAGTTTAGGGTAAATGAATTCGGAGCTTTGGAAGTTATCACAGAC
GAAAGCGAGATGGAAAGTGTGAAGAAAGCAACAGCCACTACCACGTGGATGGTCCCAACTGCTC
AGGACGCCCCGCCCTCTCCCCTGAGCTCCAGGCCCGCATTTCCACCTGCCTACTGGACATCTCC
ACCCGGATGTCCCACAGTCTTTTCAGAGAAGACTGGGGTACCCTTCAGGCTGAAGGAGCAGTCG
AAAGTAGATGGGCTCCAGTTTTGTGAGAACTGTTGTCAGTATGGCAACGGAGAGGAGTGTCTTT
CTGGAGGGAACTATTGCAGCCAGAACTGTTCACGGCGTGCCAGAGACAAAGATCAGAAGGAAGA
CCGAGATGGAGGCGAGGACAATGACGAGGAGGATCCTAAGTGTAGTCGGAAGAAAAAACCAAAA
TTATCTCTGAAGGCTGACTCCAAGGAAGATGAAGAGAGAGATGATGAAATGGAGAACAAACAAG
ATGGAAGGATCCTGAGGGGTTCTCAGAGAGCCAGAAGGAAAAGACGTGGGGATTCAGCCGTCTT
AAAGCAGGGCTTGCCTCCTAAAGGCAAGAAAACCTGGTGCTGGGCATCCTACCTAGAGGAGGAG
AAAGCTGTGGCAGTGCCGACGAAGCTGTTCAAAGAGCACCAGTCCTTCCCATACAACAAAAATG
GATTCAAAGTCGGCATGAAGCTAGAAGGTGTGGACCCTGAGCACCAGTCTGTGTACTGTGTCCT
CACTGTGGCTGAGGTTTGTGGATATAGGATAAAGCTTCACTTTGATGGATATTCTGACTGCTAC
GACTTCTGGGTAAACGCCGATGCTTTGGACATTCACCCCGTGGGCTGGTGTGAGAAGACTGGTC
ATAAGCTCCGCCCTCCTAAAGGCTATAAAGAAGAAGAATTTAATTGGCAGTCCTACCTTAAGAC
GTGCAAAGCCCAGGCTGCTCCCAAGTCATTATTTGAAAATCAGAACATAACAGTGATCCCGTCA
GGTTTTCGAGTTGGAATGAAGCTCGAGGCTGCAGACAAAAAGAGTCCTTCCATTATCTGCGTTG
CTACGGTAACAGATATGGTGGACAACCGTTTCCTGGTCCATTTTGACAACTGGGACGAGAGCTA
TGACTATTGGTGCGAATCAAACAGCCCACATATTCATCCAGTCGGATGGTGTAAAGAACACAGA
AGAACACTGATTACACCACCAGGCTATTCGCATGTGAAACACTTTTCCTGGGATAAATATCTAG
AAGAGACCAATTCTTTACCTGCTCCTGCAAGAGCTTTCAAAGTGAAACCTCCACATGGATTCCA
GAAAAAAATGAAGCTTGAGGCTGTGGACAAAAGAAACCCACTGTTCATCAGAGTAGCAACGGTA
GCAGACACGGATGATCACCGGATAAAAGTTCACTTTGATGGCTGGAGCAGTTGCTATGACTACT
GGATTGACGCAGACTCTCCGGATATTCACCCTGTAGGCTGGTGTTCCAAGACCGGACACCCTCT
TCAGGCTCCGCTAAGCCCTGCAGAATTAATGGAACCGTCAGAAACTGGGGGCTGTCCAACCCTA
GGCTGTAGGGGAGTTGGTCATTTTAAAAAATCGAGGTACCTGGGCACTCAGAGTGGTGCCAACT
GTCCCTATTCAGAAATCAACTTGAGTAAAGACCGCATCTTCCCCGACCGTCTAAGTGGTGAGAT
AACCCCATCCAGTTTCTCATTCCCAAGAAGTAAAAGGACAGACACCAATGAAAGTTCATCATCC
CCGGAAACCAGGGACCAGCATGCCAATAATGTCAAAGAAGATTCTGAAAAGAAAAAAGAAAATG
AAGTAAAGACATCAGCCGAAGCCAAAGTTGTTCGGGAAGAGCCTACCCCCAGCGTACAGCAGAC
TCAGCCACCTCAGCAGGCACTAAAGGCTCCGCAAGCTCCACAGATCCAGCCAGCCCAGCAGGCC
CCACAGGCACCGCAGGCTCAGCCAACCCAGCAGCAGGCCCAGCAGGCTCAGCAGGCCCCACAGG
CACCGCAGGCCCAGCCGGCCCCACAGGCCCCGCAGACCCATCCAACCCAGCAGCAGGCCCAACA
GGCCCAGCCAACCCAGCAGCAGGCCCAGCAGGCCCAGCCAACCCAGCAGCAGCAGGCCCAGCAG
CAGGCCCAGAGGCGCTCAGCTGTATTTCTCTCCTTTAAGCCTCCAATTCCATGTCTGCCCCTGC
GCTGGGAGCAACAGAGCAAGCTTCTTCCAACTGTTGCTGGGATCCCGGCGAGTCGAGTTTCCAA
GTGGAGCACAGACGAGGTGTCAGAATTCATTCAGAGTTTGCCCGGATGTGAAGAACATGGAAAG
GTGTTTAAGGATGAACAAATTGATGGAGAAGCATTTTTACTGATGACCCAGACAGACATTGTTA
AAATTATGAGCATTAAGCTGGGCCCAGCTCTCAAAATTTTCAATTCTATTCTGATGTTCAAAGC
CGCGGAGAAGAATTCCCACAACGAACTGTGAAGACGGTGAATTCTGGCACCATCGGCTTCTGCT
TTATAGCTCATTATGTTCTTTCAAAGCACAAGGACAGCTCCGGCTCTGGAGTGAGGAGTCTTCG
GAATTCCCAGGGGCAGCACTACAGGGCCCATGGGTCCCTCCAGCTGCAGACACATTCTTAGGGA
ATGCCCAAGCTTCTTACCAGCAACTGGCCAACAGCAGTCACCTTTGGTTCCGCTCACCGAGCTA
AACTTAACCTTTGTAAATTTTTTGGATGTGGGAGGAGGGTGGGGAGAGGGAGGCTTCGTTATTT
ATGGATGGGGCAAAAATCAGAACTTTTGGCATTTTGTAAACATTGTCGGAGTCTCTTTCATGTA
CACTTTCTTTTTTTTTTTTTTTTCAATATTTTCAGAAACCTTTT

hide sequence

RefSeq Acc Id:

XM_006227697 ⟹ XP_006227759

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	20,810,266 - 20,908,609 (+)	NCBI
mRatBN7.2	1	18,990,613 - 19,089,247 (+)	NCBI
Rnor_6.0	1	19,999,759 - 20,097,298 (+)	NCBI
Rnor_5.0	1	21,485,938 - 21,584,635 (+)	NCBI

Sequence:

show sequence

CCAGCCAGCCGCCGGCCGGAGGAGGAGGCAAACTTGAGAGCGGCGGGGCCAGGGGCGCGCTTGA
GGAGGGAAAACTTTAATCGCCTTCTCGGGAAAAAAAAAAAAAGAAAAAATCCAAAAGACAAAAA
AGTGCGTGTGTATGTGTGTAGGGTTCTAGGATCCGAACCCCACGATCGGATCGGATCTGATCCG
ATCACGGCCCACCGCGGGGCCGTGAGAGAAAGTTGACCAGCGGGACGGCTTTCTCTGCGCCCGG
CTCGCGTCTGGCCGAGGTGTCTGTCTGTCAGTCCGCGCTCCGACACAACAGGGGTGGGAGATCC
AGCCGCACTGCCCGGTCGCGTGGGTCAGGGCTCTTGCCCCACCCTTCCACGGGGACACGAAGGC
TACCAGGTAAATCATGACTGAATCTTCATCTACCACAAGTGGTCAAGAGTTTGATGTGTTCAGT
GTTATGGACTGGAAGGATGGCGTTGGTACCCTACCAGGAAGTGATTTGAAGTTTAGGGTAAATG
AATTCGGAGCTTTGGAAGTTATCACAGACGAAAGCGAGATGGAAAGTGTGAAGAAAGCAACAGC
CACTACCACGTGGATGGTCCCAACTGCTCAGGACGCCCCGCCCTCTCCCCTGAGCTCCAGGCCC
GCATTTCCACCTGCCTACTGGACATCTCCACCCGGATGTCCCACAGTCTTTTCAGAGAAGACTG
GGGTACCCTTCAGGCTGAAGGAGCAGTCGAAAGTAGATGGGCTCCAGTTTTGTGAGAACTGTTG
TCAGTATGGCAACGGAGAGGAGTGTCTTTCTGGAGGGAACTATTGCAGCCAGAACTGTTCACGG
CGTGCCAGAGACAAAGATCAGAAGGAAGACCGAGATGGAGGCGAGGACAATGACGAGGAGGATC
CTAAGTGTAGTCGGAAGAAAAAACCAAAATTATCTCTGAAGGCTGACTCCAAGGAAGATGAAGA
GAGAGATGATGAAATGGAGAACAAACAAGATGGAAGGATCCTGAGGGGTTCTCAGAGAGCCAGA
AGGAAAAGACGTGGGGATTCAGCCGTCTTAAAGCAGGGCTTGCCTCCTAAAGGCAAGAAAACCT
GGTGCTGGGCATCCTACCTAGAGGAGGAGAAAGCTGTGGCAGTGCCGACGAAGCTGTTCAAAGA
GCACCAGTCCTTCCCATACAACAAAAATGGATTCAAAGTCGGCATGAAGCTAGAAGGTGTGGAC
CCTGAGCACCAGTCTGTGTACTGTGTCCTCACTGTGGCTGAGGTTTGTGGATATAGGATAAAGC
TTCACTTTGATGGATATTCTGACTGCTACGACTTCTGGGTAAACGCCGATGCTTTGGACATTCA
CCCCGTGGGCTGGTGTGAGAAGACTGGTCATAAGCTCCGCCCTCCTAAAGGCTATAAAGAAGAA
GAATTTAATTGGCAGTCCTACCTTAAGACGTGCAAAGCCCAGGCTGCTCCCAAGTCATTATTTG
AAAATCAGAACATAACAGTGATCCCGTCAGGTTTTCGAGTTGGAATGAAGCTCGAGGCTGCAGA
CAAAAAGAGTCCTTCCATTATCTGCGTTGCTACGGTAACAGATATGGTGGACAACCGTTTCCTG
GTCCATTTTGACAACTGGGACGAGAGCTATGACTATTGGTGCGAATCAAACAGCCCACATATTC
ATCCAGTCGGATGGTGTAAAGAACACAGAAGAACACTGATTACACCACCAGGCTATTCGCATGT
GAAACACTTTTCCTGGGATAAATATCTAGAAGAGACCAATTCTTTACCTGCTCCTGCAAGAGCT
TTCAAAGTGAAACCTCCACATGGATTCCAGAAAAAAATGAAGCTTGAGGCTGTGGACAAAAGAA
ACCCACTGTTCATCAGAGTAGCAACGGTAGCAGACACGGATGATCACCGGATAAAAGTTCACTT
TGATGGCTGGAGCAGTTGCTATGACTACTGGATTGACGCAGACTCTCCGGATATTCACCCTGTA
GGCTGGTGTTCCAAGACCGGACACCCTCTTCAGGCTCCGCTAAGCCCTGCAGAATTAATGGAAC
CGTCAGAAACTGGGGGCTGTCCAACCCTAGGCTGTAGGGGAGTTGGTCATTTTAAAAAATCGAG
GTACCTGGGCACTCAGAGTGGTGCCAACTGTCCCTATTCAGAAATCAACTTGAGTAAAGACCGC
ATCTTCCCCGACCGTCTAAGTGGTGAGATAACCCCATCCAGTTTCTCATTCCCAAGAAGTAAAA
GGACAGACACCAATGAAAGTTCATCATCCCCGGAAACCAGGGACCAGCATGCCAATAATGTCAA
AGAAGATTCTGAAAAGAAAAAAGAAAATGAAGTAAAGACATCAGCCGAAGCCAAAGTTGTTCGG
GAAGAGCCTACCCCCAGCGTACAGCAGACTCAGCCACCTCAGCAGGCACTAAAGGCTCCGCAAG
CTCCACAGATCCAGCCAGCCCAGCAGGCCCCACAGGCACCGCAGGCTCAGCCAACCCAGCAGCA
GGCCCAGCAGGCTCAGCAGGCCCCACAGGCACCGCAGGCCCAGCCGGCCCCACAGGCCCCGCAG
ACCCATCCAACCCAGCAGCAGGCCCAACAGGCCCAGCCAACCCAGCAGCAGGCCCAGCAGGCCC
AGCCAACCCAGCAGCAGCAGGCCCAGCAGCAGGCCCAGAGGCGCTCAGCTGTATTTCTCTCCTT
TAAGCCTCCAATTCCATGTCTGCCCCTGCGCTGGGAGCAACAGAGCAAGCTTCTTCCAACTGTT
GCTGGGATCCCGGCGAGTCGAGTTTCCAAGTGGAGCACAGACGAGGTGTCAGAATTCATTCAGA
GTTTGCCCGGATGTGAAGAACATGGAAAGGTGTTTAAGGATGAACAAATTGATGGAGAAGCATT
TTTACTGATGACCCAGACAGACATTGTTAAAATTATGAGCATTAAGCTGGGCCCAGCTCTCAAA
ATTTTCAATTCTATTCTGATGTTCAAAGCCGCGGAGAAGAATTCCCACAACGAACTGTGAAGAC
GGTGAATTCTGGCACCATCGGCTTCTGCTTTATAGCTCATTATGTTCTTTCAAAGCACAAGGAC
AGCTCCGGCTCTGGAGTGAGGAGTCTTCGGAATTCCCAGGGGCAGCACTACAGGGCCCATGGGT
CCCTCCAGCTGCAGACACATTCTTAGGGAATGCCCAAGCTTCTTACCAGCAACTGGCCAACAGC
AGTCACCTTTGGTTCCGCTCACCGAGCTAAACTTAACCTTTGTAAATTTTTTGGATGTGGGAGG
AGGGTGGGGAGAGGGAGGCTTCGTTATTTATGGATGGGGCAAAAATCAGAACTTTTGGCATTTT
GTAAACATTGTCGGAGTCTCTTTCATGTACACTTTCTTTTTTTTTTTTTTTTCAATATTTTCAG
AAACCTTTT

hide sequence

RefSeq Acc Id:

XM_006227699 ⟹ XP_006227761

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	20,833,150 - 20,908,609 (+)	NCBI
mRatBN7.2	1	19,013,784 - 19,089,247 (+)	NCBI
Rnor_6.0	1	20,022,823 - 20,097,298 (+)	NCBI
Rnor_5.0	1	21,485,938 - 21,584,635 (+)	NCBI

Sequence:

show sequence

CTACCACAAGTGGTCAAGAGTTTGATGTGTTCAGTGTTATGGACTGGAAGGATGGCGTTGGTAC
CCTACCAGGAAGTGATTTGAAGGGTAAATGAATTCGGAGCTTTGGAAGTTATCACAGACGAAAG
CGAGATGGAAAGTGTGAAGAAAGCAACAGCCACTACCACGTGGATGGTCCCAACTGCTCAGGAC
GCCCCGCCCTCTCCCCTGAGCTCCAGGCCCGCATTTCCACCTGCCTACTGGACATCTCCACCCG
GATGTCCCACAGTCTTTTCAGAGAAGACTGGGGTACCCTTCAGGCTGAAGGAGCAGTCGAAAGT
AGATGGGCTCCAGTTTTGTGAGAACTGTTGTCAGTATGGCAACGGAGAGGAGTGTCTTTCTGGA
GGGAACTATTGCAGCCAGAACTGTTCACGGCGTGCCAGAGACAAAGATCAGAAGGAAGACCGAG
ATGGAGGCGAGGACAATGACGAGGAGGATCCTAAGTGTAGTCGGAAGAAAAAACCAAAATTATC
TCTGAAGGCTGACTCCAAGGAAGATGAAGAGAGAGATGATGAAATGGAGAACAAACAAGATGGA
AGGATCCTGAGGGGTTCTCAGAGAGCCAGAAGGAAAAGACGTGGGGATTCAGCCGTCTTAAAGC
AGGGCTTGCCTCCTAAAGGCAAGAAAACCTGGTGCTGGGCATCCTACCTAGAGGAGGAGAAAGC
TGTGGCAGTGCCGACGAAGCTGTTCAAAGAGCACCAGTCCTTCCCATACAACAAAAATGGATTC
AAAGTCGGCATGAAGCTAGAAGGTGTGGACCCTGAGCACCAGTCTGTGTACTGTGTCCTCACTG
TGGCTGAGGTTTGTGGATATAGGATAAAGCTTCACTTTGATGGATATTCTGACTGCTACGACTT
CTGGGTAAACGCCGATGCTTTGGACATTCACCCCGTGGGCTGGTGTGAGAAGACTGGTCATAAG
CTCCGCCCTCCTAAAGGCTATAAAGAAGAAGAATTTAATTGGCAGTCCTACCTTAAGACGTGCA
AAGCCCAGGCTGCTCCCAAGTCATTATTTGAAAATCAGAACATAACAGTGATCCCGTCAGGTTT
TCGAGTTGGAATGAAGCTCGAGGCTGCAGACAAAAAGAGTCCTTCCATTATCTGCGTTGCTACG
GTAACAGATATGGTGGACAACCGTTTCCTGGTCCATTTTGACAACTGGGACGAGAGCTATGACT
ATTGGTGCGAATCAAACAGCCCACATATTCATCCAGTCGGATGGTGTAAAGAACACAGAAGAAC
ACTGATTACACCACCAGGCTATTCGCATGTGAAACACTTTTCCTGGGATAAATATCTAGAAGAG
ACCAATTCTTTACCTGCTCCTGCAAGAGCTTTCAAAGTGAAACCTCCACATGGATTCCAGAAAA
AAATGAAGCTTGAGGCTGTGGACAAAAGAAACCCACTGTTCATCAGAGTAGCAACGGTAGCAGA
CACGGATGATCACCGGATAAAAGTTCACTTTGATGGCTGGAGCAGTTGCTATGACTACTGGATT
GACGCAGACTCTCCGGATATTCACCCTGTAGGCTGGTGTTCCAAGACCGGACACCCTCTTCAGG
CTCCGCTAAGCCCTGCAGAATTAATGGAACCGTCAGAAACTGGGGGCTGTCCAACCCTAGGCTG
TAGGGGAGTTGGTCATTTTAAAAAATCGAGGTACCTGGGCACTCAGAGTGGTGCCAACTGTCCC
TATTCAGAAATCAACTTGAGTAAAGACCGCATCTTCCCCGACCGTCTAAGTGGTGAGATAACCC
CATCCAGTTTCTCATTCCCAAGAAGTAAAAGGACAGACACCAATGAAAGTTCATCATCCCCGGA
AACCAGGGACCAGCATGCCAATAATGTCAAAGAAGATTCTGAAAAGAAAAAAGAAAATGAAGTA
AAGACATCAGCCGAAGCCAAAGTTGTTCGGGAAGAGCCTACCCCCAGCGTACAGCAGACTCAGC
CACCTCAGCAGGCACTAAAGGCTCCGCAAGCTCCACAGATCCAGCCAGCCCAGCAGGCCCCACA
GGCACCGCAGGCTCAGCCAACCCAGCAGCAGGCCCAGCAGGCTCAGCAGGCCCCACAGGCACCG
CAGGCCCAGCCGGCCCCACAGGCCCCGCAGACCCATCCAACCCAGCAGCAGGCCCAACAGGCCC
AGCCAACCCAGCAGCAGGCCCAGCAGGCCCAGCCAACCCAGCAGCAGCAGGCCCAGCAGCAGGC
CCAGAGGCGCTCAGCTGTATTTCTCTCCTTTAAGCCTCCAATTCCATGTCTGCCCCTGCGCTGG
GAGCAACAGAGCAAGCTTCTTCCAACTGTTGCTGGGATCCCGGCGAGTCGAGTTTCCAAGTGGA
GCACAGACGAGGTGTCAGAATTCATTCAGAGTTTGCCCGGATGTGAAGAACATGGAAAGGTGTT
TAAGGATGAACAAATTGATGGAGAAGCATTTTTACTGATGACCCAGACAGACATTGTTAAAATT
ATGAGCATTAAGCTGGGCCCAGCTCTCAAAATTTTCAATTCTATTCTGATGTTCAAAGCCGCGG
AGAAGAATTCCCACAACGAACTGTGAAGACGGTGAATTCTGGCACCATCGGCTTCTGCTTTATA
GCTCATTATGTTCTTTCAAAGCACAAGGACAGCTCCGGCTCTGGAGTGAGGAGTCTTCGGAATT
CCCAGGGGCAGCACTACAGGGCCCATGGGTCCCTCCAGCTGCAGACACATTCTTAGGGAATGCC
CAAGCTTCTTACCAGCAACTGGCCAACAGCAGTCACCTTTGGTTCCGCTCACCGAGCTAAACTT
AACCTTTGTAAATTTTTTGGATGTGGGAGGAGGGTGGGGAGAGGGAGGCTTCGTTATTTATGGA
TGGGGCAAAAATCAGAACTTTTGGCATTTTGTAAACATTGTCGGAGTCTCTTTCATGTACACTT
TCTTTTTTTTTTTTTTTTCAATATTTTCAGAAACCTTTT

hide sequence

RefSeq Acc Id:

XM_039098994 ⟹ XP_038954922

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	20,810,257 - 20,908,609 (+)	NCBI
mRatBN7.2	1	18,990,613 - 19,089,247 (+)	NCBI

RefSeq Acc Id:

XM_039098995 ⟹ XP_038954923

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	20,808,940 - 20,908,609 (+)	NCBI
mRatBN7.2	1	18,988,976 - 19,089,247 (+)	NCBI

RefSeq Acc Id:

XM_039098996 ⟹ XP_038954924

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	20,808,940 - 20,908,609 (+)	NCBI
mRatBN7.2	1	18,988,976 - 19,089,247 (+)	NCBI

RefSeq Acc Id:

XM_039098998 ⟹ XP_038954926

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	20,808,213 - 20,908,609 (+)	NCBI
mRatBN7.2	1	18,988,848 - 19,089,247 (+)	NCBI

RefSeq Acc Id:

XM_039099000 ⟹ XP_038954928

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	20,808,958 - 20,908,609 (+)	NCBI
mRatBN7.2	1	18,988,976 - 19,089,247 (+)	NCBI

RefSeq Acc Id:

XM_039099003 ⟹ XP_038954931

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	20,810,257 - 20,908,609 (+)	NCBI
mRatBN7.2	1	18,990,614 - 19,089,247 (+)	NCBI

RefSeq Acc Id:

XM_039099013 ⟹ XP_038954941

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	20,833,150 - 20,908,609 (+)	NCBI
mRatBN7.2	1	19,013,784 - 19,089,247 (+)	NCBI

RefSeq Acc Id:

XM_063276392 ⟹ XP_063132462

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	20,807,679 - 20,908,609 (+)	NCBI

RefSeq Acc Id:

XM_063276402 ⟹ XP_063132472

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	20,808,940 - 20,908,609 (+)	NCBI

RefSeq Acc Id:

XM_063276409 ⟹ XP_063132479

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	20,807,679 - 20,908,609 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001419245	(Get FASTA)	NCBI Sequence Viewer
	NP_001419247	(Get FASTA)	NCBI Sequence Viewer
	NP_001419248	(Get FASTA)	NCBI Sequence Viewer
	NP_001419249	(Get FASTA)	NCBI Sequence Viewer
	NP_001419250	(Get FASTA)	NCBI Sequence Viewer
	XP_003748714	(Get FASTA)	NCBI Sequence Viewer
	XP_006227757	(Get FASTA)	NCBI Sequence Viewer
	XP_006227758	(Get FASTA)	NCBI Sequence Viewer
	XP_006227759	(Get FASTA)	NCBI Sequence Viewer
	XP_006227761	(Get FASTA)	NCBI Sequence Viewer
	XP_038954922	(Get FASTA)	NCBI Sequence Viewer
	XP_038954923	(Get FASTA)	NCBI Sequence Viewer
	XP_038954924	(Get FASTA)	NCBI Sequence Viewer
	XP_038954926	(Get FASTA)	NCBI Sequence Viewer
	XP_038954928	(Get FASTA)	NCBI Sequence Viewer
	XP_038954931	(Get FASTA)	NCBI Sequence Viewer
	XP_038954941	(Get FASTA)	NCBI Sequence Viewer
	XP_063132462	(Get FASTA)	NCBI Sequence Viewer
	XP_063132472	(Get FASTA)	NCBI Sequence Viewer
	XP_063132479	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL93831	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000058121
	ENSRNOP00000058121.4
	ENSRNOP00000083485
	ENSRNOP00000083485.2
	ENSRNOP00000090170.1
	ENSRNOP00000092290.2

RefSeq Acc Id:	XP_003748714 ⟸ XM_003748666
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZZG3 (UniProtKB/TrEMBL), A0A8I6ADW7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTESSSTTSGQEFDVFSVMDWKDGVGTLPGSDLKFRVNEFGALEVITDESEMESVKKATATTTW MVPTAQDAPPSPLSSRPAFPPAYWTSPPGCPTVFSEKTGVPFRLKEQSKVDGLQFCENCCQYGN GEECLSGGNYCSQNCSRRARDKDQKEDRDGGEDNDEEDPKCSRKKKPKLSLKADSKEDEERDDE MENKQDGRILRGSQRARRKRRGDSAVLKQGLPPKGKKTWCWASYLEEEKAVAVPTKLFKEHQSF PYNKNGFKVGMKLEGVDPEHQSVYCVLTVAEVCGYRIKLHFDGYSDCYDFWVNADALDIHPVGW CEKTGHKLRPPKGYKEEEFNWQSYLKTCKAQAAPKSLFENQNITVIPSGFRVGMKLEAADKKSP SIICVATVTDMVDNRFLVHFDNWDESYDYWCESNSPHIHPVGWCKEHRRTLITPPGYSHVKHFS WDKYLEETNSLPAPARAFKVKPPHGFQKKMKLEAVDKRNPLFIRVATVADTDDHRIKVHFDGWS SCYDYWIDADSPDIHPVGWCSKTGHPLQAPLSPAELMEPSETGGCPTLGCRGVGHFKKSRYLGT QSGANCPYSEINLSKDRIFPDRLSGEITPSSFSFPRSKRTDTNESSSSPETRDQHANNVKEDSE KKKENEVKTSAEAKVVREEPTPSVQQTQPPQQALKAPQAPQIQPAQQAPQAPQAQPTQQQAQQA QQAPQAPQAQPAPQAPQTHPTQQQAQQAQPTQQQAQQAQPTQQQQAQQQAQRRSAVFLSFKPPI PCLPLRWEQQSKLLPTVAGIPASRVSKWSTDEVSEFIQSLPGCEEHGKVFKDEQIDGEAFLLMT QTDIVKIMSIKLGPALKIFNSILMFKAAEKNSHNEL hide sequence

RefSeq Acc Id:

XP_006227757 ⟸ XM_006227695

- Peptide Label:

isoform X1

- Sequence:

show sequence

MTESSSTTSGQEFDVFSVMDWKDGVGTLPGSDLKFRVNEFGALEVITDESEMESVKKATATTTW
MVPTAQDAPPSPLSSRPAFPPAYWTSPPGCPTVFSEKTGVPFRLKEQSKVDGLQFCENCCQYGN
GEECLSGGNYCSQNCSRRARDKDQKEDRDGGEDNDEEDPKCSRKKKPKLSLKADSKEDEERDDE
MENKQDGRILRGSQRARRKRRGDSAVLKQGLPPKGKKTWCWASYLEEEKAVAVPTKLFKEHQSF
PYNKNGFKVGMKLEGVDPEHQSVYCVLTVAEVCGYRIKLHFDGYSDCYDFWVNADALDIHPVGW
CEKTGHKLRPPKGYKEEEFNWQSYLKTCKAQAAPKSLFENQNITVIPSGFRVGMKLEAADKKSP
SIICVATVTDMVDNRFLVHFDNWDESYDYWCESNSPHIHPVGWCKEHRRTLITPPGYSHVKHFS
WDKYLEETNSLPAPARAFKVKPPHGFQKKMKLEAVDKRNPLFIRVATVADTDDHRIKVHFDGWS
SCYDYWIDADSPDIHPVGWCSKTGHPLQAPLSPAELMEPSETGGCPTLGCRGVGHFKKSRYLGT
QSGANCPYSEINLSKDRIFPDRLSGEITPSSFSFPRSKRTDTNESSSSPETRDQHANNVKEDSE
KKKENEVKTSAEAKVVREEPTPSVQQTQPPQQALKAPQAPQIQPAQQAPQAPQAQPTQQQAQQA
QQAPQAPQAQPAPQAPQTHPTQQQAQQAQPTQQQAQQAQPTQQQQAQQQAQRRSAVFLSFKPPI
PCLPLRWEQQSKLLPTVAGIPASRVSKWSTDEVSEFIQSLPGCEEHGKVFKDEQIDGEAFLLMT
QTDIVKIMSIKLGPALKIFNSILMFKAAEKNSHNEL

hide sequence

RefSeq Acc Id:

XP_006227758 ⟸ XM_006227696

- Peptide Label:

isoform X1

- Sequence:

show sequence

MTESSSTTSGQEFDVFSVMDWKDGVGTLPGSDLKFRVNEFGALEVITDESEMESVKKATATTTW
MVPTAQDAPPSPLSSRPAFPPAYWTSPPGCPTVFSEKTGVPFRLKEQSKVDGLQFCENCCQYGN
GEECLSGGNYCSQNCSRRARDKDQKEDRDGGEDNDEEDPKCSRKKKPKLSLKADSKEDEERDDE
MENKQDGRILRGSQRARRKRRGDSAVLKQGLPPKGKKTWCWASYLEEEKAVAVPTKLFKEHQSF
PYNKNGFKVGMKLEGVDPEHQSVYCVLTVAEVCGYRIKLHFDGYSDCYDFWVNADALDIHPVGW
CEKTGHKLRPPKGYKEEEFNWQSYLKTCKAQAAPKSLFENQNITVIPSGFRVGMKLEAADKKSP
SIICVATVTDMVDNRFLVHFDNWDESYDYWCESNSPHIHPVGWCKEHRRTLITPPGYSHVKHFS
WDKYLEETNSLPAPARAFKVKPPHGFQKKMKLEAVDKRNPLFIRVATVADTDDHRIKVHFDGWS
SCYDYWIDADSPDIHPVGWCSKTGHPLQAPLSPAELMEPSETGGCPTLGCRGVGHFKKSRYLGT
QSGANCPYSEINLSKDRIFPDRLSGEITPSSFSFPRSKRTDTNESSSSPETRDQHANNVKEDSE
KKKENEVKTSAEAKVVREEPTPSVQQTQPPQQALKAPQAPQIQPAQQAPQAPQAQPTQQQAQQA
QQAPQAPQAQPAPQAPQTHPTQQQAQQAQPTQQQAQQAQPTQQQQAQQQAQRRSAVFLSFKPPI
PCLPLRWEQQSKLLPTVAGIPASRVSKWSTDEVSEFIQSLPGCEEHGKVFKDEQIDGEAFLLMT
QTDIVKIMSIKLGPALKIFNSILMFKAAEKNSHNEL

hide sequence

RefSeq Acc Id:	XP_006227759 ⟸ XM_006227697
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZZG3 (UniProtKB/TrEMBL), A0A8I6ADW7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTESSSTTSGQEFDVFSVMDWKDGVGTLPGSDLKFRVNEFGALEVITDESEMESVKKATATTTW MVPTAQDAPPSPLSSRPAFPPAYWTSPPGCPTVFSEKTGVPFRLKEQSKVDGLQFCENCCQYGN GEECLSGGNYCSQNCSRRARDKDQKEDRDGGEDNDEEDPKCSRKKKPKLSLKADSKEDEERDDE MENKQDGRILRGSQRARRKRRGDSAVLKQGLPPKGKKTWCWASYLEEEKAVAVPTKLFKEHQSF PYNKNGFKVGMKLEGVDPEHQSVYCVLTVAEVCGYRIKLHFDGYSDCYDFWVNADALDIHPVGW CEKTGHKLRPPKGYKEEEFNWQSYLKTCKAQAAPKSLFENQNITVIPSGFRVGMKLEAADKKSP SIICVATVTDMVDNRFLVHFDNWDESYDYWCESNSPHIHPVGWCKEHRRTLITPPGYSHVKHFS WDKYLEETNSLPAPARAFKVKPPHGFQKKMKLEAVDKRNPLFIRVATVADTDDHRIKVHFDGWS SCYDYWIDADSPDIHPVGWCSKTGHPLQAPLSPAELMEPSETGGCPTLGCRGVGHFKKSRYLGT QSGANCPYSEINLSKDRIFPDRLSGEITPSSFSFPRSKRTDTNESSSSPETRDQHANNVKEDSE KKKENEVKTSAEAKVVREEPTPSVQQTQPPQQALKAPQAPQIQPAQQAPQAPQAQPTQQQAQQA QQAPQAPQAQPAPQAPQTHPTQQQAQQAQPTQQQAQQAQPTQQQQAQQQAQRRSAVFLSFKPPI PCLPLRWEQQSKLLPTVAGIPASRVSKWSTDEVSEFIQSLPGCEEHGKVFKDEQIDGEAFLLMT QTDIVKIMSIKLGPALKIFNSILMFKAAEKNSHNEL hide sequence

RefSeq Acc Id:	XP_006227761 ⟸ XM_006227699
- Peptide Label:	isoform X3
- UniProtKB:	D3ZJT9 (UniProtKB/TrEMBL), A0A8I6ADW7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MESVKKATATTTWMVPTAQDAPPSPLSSRPAFPPAYWTSPPGCPTVFSEKTGVPFRLKEQSKVD GLQFCENCCQYGNGEECLSGGNYCSQNCSRRARDKDQKEDRDGGEDNDEEDPKCSRKKKPKLSL KADSKEDEERDDEMENKQDGRILRGSQRARRKRRGDSAVLKQGLPPKGKKTWCWASYLEEEKAV AVPTKLFKEHQSFPYNKNGFKVGMKLEGVDPEHQSVYCVLTVAEVCGYRIKLHFDGYSDCYDFW VNADALDIHPVGWCEKTGHKLRPPKGYKEEEFNWQSYLKTCKAQAAPKSLFENQNITVIPSGFR VGMKLEAADKKSPSIICVATVTDMVDNRFLVHFDNWDESYDYWCESNSPHIHPVGWCKEHRRTL ITPPGYSHVKHFSWDKYLEETNSLPAPARAFKVKPPHGFQKKMKLEAVDKRNPLFIRVATVADT DDHRIKVHFDGWSSCYDYWIDADSPDIHPVGWCSKTGHPLQAPLSPAELMEPSETGGCPTLGCR GVGHFKKSRYLGTQSGANCPYSEINLSKDRIFPDRLSGEITPSSFSFPRSKRTDTNESSSSPET RDQHANNVKEDSEKKKENEVKTSAEAKVVREEPTPSVQQTQPPQQALKAPQAPQIQPAQQAPQA PQAQPTQQQAQQAQQAPQAPQAQPAPQAPQTHPTQQQAQQAQPTQQQAQQAQPTQQQQAQQQAQ RRSAVFLSFKPPIPCLPLRWEQQSKLLPTVAGIPASRVSKWSTDEVSEFIQSLPGCEEHGKVFK DEQIDGEAFLLMTQTDIVKIMSIKLGPALKIFNSILMFKAAEKNSHNEL hide sequence

Ensembl Acc Id:

ENSRNOP00000058121 ⟸ ENSRNOT00000061404

RefSeq Acc Id:	XP_038954926 ⟸ XM_039098998
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZZG3 (UniProtKB/TrEMBL), A0A8I6ADW7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038954924 ⟸ XM_039098996
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZZG3 (UniProtKB/TrEMBL), A0A8I6ADW7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038954923 ⟸ XM_039098995
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZZG3 (UniProtKB/TrEMBL), A0A8I6ADW7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038954928 ⟸ XM_039099000
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZZG3 (UniProtKB/TrEMBL), A0A8I6ADW7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038954922 ⟸ XM_039098994
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5ZZG3 (UniProtKB/TrEMBL), A0A8I6ADW7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038954931 ⟸ XM_039099003
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038954941 ⟸ XM_039099013
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6ADW7 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000092290 ⟸ ENSRNOT00000107555

Ensembl Acc Id:

ENSRNOP00000090170 ⟸ ENSRNOT00000118227

Ensembl Acc Id:

ENSRNOP00000083485 ⟸ ENSRNOT00000118212

RefSeq Acc Id:	XP_063132462 ⟸ XM_063276392
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063132479 ⟸ XM_063276409
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063132472 ⟸ XM_063276402
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AH98 (UniProtKB/TrEMBL), A0A8I6ADW7 (UniProtKB/TrEMBL)

Protein Domains

SAM

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZJT9-F1-model_v2	AlphaFold	D3ZJT9	1-843	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1305474	AgrOrtholog
BioCyc Gene	G2FUF-62151	BioCyc
Ensembl Genes	ENSRNOG00000011720	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000061404	ENTREZGENE
	ENSRNOT00000061404.6	UniProtKB/TrEMBL
	ENSRNOT00000107555.2	UniProtKB/TrEMBL
	ENSRNOT00000118212	ENTREZGENE
	ENSRNOT00000118212.2	UniProtKB/TrEMBL
	ENSRNOT00000118227.2	UniProtKB/TrEMBL
Gene3D-CATH	1.10.150.50	UniProtKB/TrEMBL
	2.30.30.140	UniProtKB/TrEMBL
InterPro	Mbt	UniProtKB/TrEMBL
	PcG_chromatin_remod_factors	UniProtKB/TrEMBL
	SAM	UniProtKB/TrEMBL
	SAM/pointed	UniProtKB/TrEMBL
	Znf_C2HC	UniProtKB/TrEMBL
KEGG Report	rno:309550	UniProtKB/TrEMBL
NCBI Gene	309550	ENTREZGENE
PANTHER	LETHAL(3)MALIGNANT BRAIN TUMOR-LIKE PROTEIN 3	UniProtKB/TrEMBL
	POLYCOMB GROUP PROTEIN	UniProtKB/TrEMBL
Pfam	MBT	UniProtKB/TrEMBL
	SAM_1	UniProtKB/TrEMBL
PhenoGen	L3mbtl3	PhenoGen
PROSITE	MBT	UniProtKB/TrEMBL
	SAM_DOMAIN	UniProtKB/TrEMBL
	ZF_CCHHC	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000011720	RatGTEx
SMART	MBT	UniProtKB/TrEMBL
	SAM	UniProtKB/TrEMBL
Superfamily-SCOP	SAM_homology	UniProtKB/TrEMBL
	Tudor/PWWP/MBT	UniProtKB/TrEMBL
UniProt	A0A8I5ZZG3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6ADW7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AH98	ENTREZGENE, UniProtKB/TrEMBL
	D3ZJT9	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-04-10	L3mbtl3	L3MBTL histone methyl-lysine binding protein 3	L3mbtl3	L3MBTL3, histone methyl-lysine binding protein	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2017-06-21	L3mbtl3	L3MBTL3, histone methyl-lysine binding protein	L3mbtl3	l(3)mbt-like 3 (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	L3mbtl3	l(3)mbt-like 3 (Drosophila)	L3mbtl3_predicted	l(3)mbt-like 3 (Drosophila) (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	L3mbtl3_predicted	l(3)mbt-like 3 (Drosophila) (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD