Cct8 (chaperonin containing TCP1 subunit 8) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Cct8 (chaperonin containing TCP1 subunit 8) Rattus norvegicus
Analyze
Symbol: Cct8
Name: chaperonin containing TCP1 subunit 8
RGD ID: 1305452
Description: Predicted to enable protein folding chaperone and unfolded protein binding activity. Predicted to be involved in protein folding and protein stabilization. Predicted to act upstream of or within binding activity of sperm to zona pellucida. Predicted to be located in cell body; cytoplasm; and microtubule cytoskeleton. Predicted to be part of chaperonin-containing T-complex and zona pellucida receptor complex. Orthologous to human CCT8 (chaperonin containing TCP1 subunit 8); INTERACTS WITH (+)-schisandrin B; 2,4-dibromophenyl 2,4,5-tribromophenyl ether; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: chaperonin containing Tcp1, subunit 8 (theta); chaperonin subunit 8 (theta); LOC288305; T-complex protein 1 subunit theta
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Cct8-ps2  
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81140,196,619 - 40,208,328 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1140,196,619 - 40,208,328 (-)EnsemblGRCr8
mRatBN7.21126,710,370 - 26,722,079 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1126,710,370 - 26,722,079 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1135,408,323 - 35,420,052 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01128,108,576 - 28,120,305 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01127,297,511 - 27,309,240 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01127,130,172 - 27,141,881 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1127,130,172 - 27,141,881 (-)Ensemblrn6Rnor6.0
Rnor_5.01130,755,620 - 30,767,329 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41127,233,711 - 27,245,369 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1126,462,714 - 26,474,420 (-)NCBICelera
RGSC_v3.11127,233,709 - 27,245,381 (-)NCBI
Cytogenetic Map11q11NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View
COVID-19  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
(-)-epigallocatechin 3-gallate  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (EXP)
2,4-dinitrotoluene  (EXP)
2,6-dimethoxyphenol  (ISO)
4,4'-sulfonyldiphenol  (ISO)
6-propyl-2-thiouracil  (EXP)
acrylamide  (ISO)
amitrole  (EXP)
aniline  (EXP)
antirheumatic drug  (ISO)
Aroclor 1254  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
benzatropine  (ISO)
benzo[a]pyrene  (ISO)
beta-naphthoflavone  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
bleomycin A2  (ISO)
Brodifacoum  (EXP)
Butylbenzyl phthalate  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
caffeine  (ISO)
cannabidiol  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chloropicrin  (ISO)
chromium(6+)  (ISO)
cisplatin  (ISO)
CU-O LINKAGE  (ISO)
Cuprizon  (ISO)
DDE  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dicrotophos  (ISO)
diethylstilbestrol  (ISO)
dioxygen  (ISO)
doxorubicin  (ISO)
enzyme inhibitor  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
etoposide  (ISO)
fenvalerate  (EXP)
finasteride  (EXP)
flutamide  (EXP)
folic acid  (ISO)
FR900359  (ISO)
furfural  (ISO)
glyphosate  (ISO)
haloperidol  (ISO)
hydroquinone O-beta-D-glucopyranoside  (ISO)
ivermectin  (ISO)
lipopolysaccharide  (ISO)
lovastatin  (ISO)
methimazole  (EXP)
miconazole  (ISO)
microcystin RR  (ISO)
N-ethyl-N-nitrosourea  (ISO)
N-nitrosomorpholine  (EXP)
nefazodone  (EXP)
nimesulide  (EXP)
nitrates  (ISO)
ochratoxin A  (ISO)
oxaliplatin  (EXP)
ozone  (ISO)
perfluorohexanesulfonic acid  (ISO)
phenobarbital  (EXP)
PhIP  (EXP)
resveratrol  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sodium chloride  (ISO)
sodium dichromate  (EXP)
Soman  (EXP)
sulfadimethoxine  (EXP)
sulforaphane  (ISO)
tanespimycin  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
topotecan  (EXP)
triptonide  (ISO)
valdecoxib  (EXP)
vinclozolin  (EXP)
warfarin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cell body  (IEA,ISO)
centrosome  (IEA,ISO)
chaperonin-containing T-complex  (IBA,IEA,ISO)
cytoplasm  (IEA,ISO)
cytosol  (IEA,ISO)
microtubule  (IEA,ISO)
zona pellucida receptor complex  (IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7828721   PMID:7890169   PMID:16780588   PMID:19056867   PMID:20080638   PMID:20193073   PMID:20458337   PMID:21525035   PMID:21880732   PMID:22871113   PMID:23011926   PMID:23376485  
PMID:23716698   PMID:24625528   PMID:25467444   PMID:25468996   PMID:33450132  


Genomics

Comparative Map Data
Cct8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81140,196,619 - 40,208,328 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1140,196,619 - 40,208,328 (-)EnsemblGRCr8
mRatBN7.21126,710,370 - 26,722,079 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1126,710,370 - 26,722,079 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1135,408,323 - 35,420,052 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01128,108,576 - 28,120,305 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01127,297,511 - 27,309,240 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01127,130,172 - 27,141,881 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1127,130,172 - 27,141,881 (-)Ensemblrn6Rnor6.0
Rnor_5.01130,755,620 - 30,767,329 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41127,233,711 - 27,245,369 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1126,462,714 - 26,474,420 (-)NCBICelera
RGSC_v3.11127,233,709 - 27,245,381 (-)NCBI
Cytogenetic Map11q11NCBI
CCT8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382129,056,326 - 29,073,648 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2129,055,805 - 29,073,797 (-)Ensemblhg38GRCh38
GRCh372130,428,647 - 30,445,969 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362129,350,518 - 29,367,881 (-)NCBIBuild 36Build 36hg18NCBI36
Build 342129,350,517 - 29,367,881NCBI
Celera2115,612,113 - 15,629,468 (-)NCBICelera
Cytogenetic Map21q21.3NCBI
HuRef2115,834,853 - 15,852,223 (-)NCBIHuRef
CHM1_12129,990,996 - 30,008,352 (-)NCBICHM1_1
T2T-CHM13v2.02127,419,768 - 27,437,088 (-)NCBIT2T-CHM13v2.0
Cct8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391687,280,213 - 87,292,757 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1687,280,214 - 87,292,761 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381687,483,325 - 87,495,869 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1687,483,326 - 87,495,873 (-)Ensemblmm10GRCm38
MGSCv371687,483,570 - 87,496,114 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361687,372,523 - 87,385,053 (-)NCBIMGSCv36mm8
Celera1687,677,894 - 87,690,438 (-)NCBICelera
Cytogenetic Map16C3.3NCBI
cM Map1649.57NCBI
Cct8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540728,414,583 - 28,428,215 (-)Ensembl
ChiLan1.0NW_00495540728,414,583 - 28,427,964 (-)NCBIChiLan1.0ChiLan1.0
CCT8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22225,240,125 - 25,258,138 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12120,098,602 - 20,116,554 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02115,489,698 - 15,507,292 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12128,878,113 - 28,895,912 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2128,878,113 - 28,895,912 (-)EnsemblpanPan2panpan1.1
CCT8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13124,061,185 - 24,075,002 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3124,061,252 - 24,075,364 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3124,054,512 - 24,068,293 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03124,174,970 - 24,188,795 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3124,174,967 - 24,189,157 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13124,125,427 - 24,139,220 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03124,127,229 - 24,141,032 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03124,598,553 - 24,612,366 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Cct8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440497124,505,117 - 24,518,165 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650012,949,563 - 12,965,064 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493650012,949,563 - 12,962,699 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CCT8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13192,407,735 - 192,423,568 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.113192,407,831 - 192,423,466 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213202,710,318 - 202,726,009 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CCT8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1263,151,783 - 63,169,249 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl263,151,481 - 63,169,098 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660715,736,497 - 5,754,304 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cct8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474517,030,539 - 17,043,637 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Cct8
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1456,367,464 - 56,378,934 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Cct8
85 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:211
Count of miRNA genes:153
Interacting mature miRNAs:169
Transcripts:ENSRNOT00000002169
Prediction methods:Microtar, Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)112252474682951192Rat
1598841Memor7Memory QTL 7exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)113330600878306008Rat
1598842Glom10Glomerulus QTL 103.4kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)11381815448818154Rat
1598811Bp291Blood pressure QTL 2911.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)113330600878306008Rat
634339Niddm50Non-insulin dependent diabetes mellitus QTL 503.32blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)111080612555806125Rat
634341Bw121Body weight QTL 1213.56abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)113532319955805892Rat
8694376Bw156Body weight QTL 1562.250.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)113674945981749459Rat
10755497Bp388Blood pressure QTL 3882.76arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)113294306789836615Rat
724517Uae18Urinary albumin excretion QTL 183.7urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)112995899657754989Rat
2290451Scl58Serum cholesterol level QTL 583.48blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)112631803155806125Rat
1300130Rf20Renal function QTL 204.44kidney glomerulus integrity trait (VT:0010546)kidney glomerulus diameter (CMO:0001166)113191546976915469Rat
10058952Gmadr6Adrenal mass QTL 62.290.0072adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)113642841681428416Rat
1600394Edcs1Endometrial carcinoma susceptibility QTL12.90.04uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)111282315257823152Rat
1558659Tescar1Testicular tumor resistance QTL 13.9testis integrity trait (VT:0010572)percentage of study population developing testis tumors during a period of time (CMO:0001261)113461876079618760Rat
724563Uae10Urinary albumin excretion QTL 106urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)112019354996351019Rat
9589032Epfw10Epididymal fat weight QTL 109.290.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)113674945981749459Rat
9590313Scort20Serum corticosterone level QTL 206.510.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)113674945981749459Rat
8694424Bw162Body weight QTL 1623.80.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)113674945981749459Rat
631510Spl2Serum phospholipid level QTL 24.1blood phospholipid amount (VT:0006084)serum phospholipid level (CMO:0001171)112755668572556685Rat

Markers in Region
RH130565  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21126,710,291 - 26,710,506 (+)MAPPERmRatBN7.2
Rnor_6.01127,130,094 - 27,130,308NCBIRnor6.0
Rnor_5.01130,755,542 - 30,755,756UniSTSRnor5.0
RGSC_v3.41127,233,632 - 27,233,846UniSTSRGSC3.4
Celera1126,462,636 - 26,462,850UniSTS
RH 3.4 Map11134.9UniSTS
Cytogenetic Map11q11UniSTS
RH133685  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21126,710,581 - 26,710,761 (+)MAPPERmRatBN7.2
Rnor_6.01127,130,384 - 27,130,563NCBIRnor6.0
Rnor_5.01130,755,832 - 30,756,011UniSTSRnor5.0
RGSC_v3.41127,233,922 - 27,234,101UniSTSRGSC3.4
Celera1126,462,926 - 26,463,105UniSTS
RH 3.4 Map11123.8UniSTS
Cytogenetic Map11q11UniSTS
AI072090  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81140,196,270 - 40,196,563 (+)Marker Load Pipeline
mRatBN7.21126,710,021 - 26,710,314 (+)MAPPERmRatBN7.2
Rnor_6.01127,129,824 - 27,130,116NCBIRnor6.0
Rnor_5.01130,755,272 - 30,755,564UniSTSRnor5.0
RGSC_v3.41127,233,362 - 27,233,654UniSTSRGSC3.4
Celera1126,462,366 - 26,462,658UniSTS
RH 3.4 Map11140.4UniSTS
Cytogenetic Map11q11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000002169   ⟹   ENSRNOP00000002169
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1140,196,619 - 40,208,328 (-)Ensembl
mRatBN7.2 Ensembl1126,710,370 - 26,722,079 (-)Ensembl
Rnor_6.0 Ensembl1127,130,172 - 27,141,881 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000099699   ⟹   ENSRNOP00000082722
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1126,711,524 - 26,722,079 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000110898   ⟹   ENSRNOP00000088403
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1140,196,619 - 40,208,328 (-)Ensembl
mRatBN7.2 Ensembl1126,710,370 - 26,722,079 (-)Ensembl
RefSeq Acc Id: NM_001105897   ⟹   NP_001099367
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81140,196,619 - 40,208,328 (-)NCBI
mRatBN7.21126,710,370 - 26,722,079 (-)NCBI
Rnor_6.01127,130,172 - 27,141,881 (-)NCBI
Rnor_5.01130,755,620 - 30,767,329 (-)NCBI
RGSC_v3.41127,233,711 - 27,245,369 (-)RGD
Celera1126,462,714 - 26,474,420 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001099367 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM10642 (Get FASTA)   NCBI Sequence Viewer  
  EDM10643 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000002169
  ENSRNOP00000002169.4
  ENSRNOP00000088403.1
RefSeq Acc Id: NP_001099367   ⟸   NM_001105897
- UniProtKB: D4ACB8 (UniProtKB/TrEMBL),   A6JL77 (UniProtKB/TrEMBL),   A6JL78 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000002169   ⟸   ENSRNOT00000002169
Ensembl Acc Id: ENSRNOP00000088403   ⟸   ENSRNOT00000110898
Ensembl Acc Id: ENSRNOP00000082722   ⟸   ENSRNOT00000099699

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4ACB8-F1-model_v2 AlphaFold D4ACB8 1-548 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698024
Promoter ID:EPDNEW_R8548
Type:initiation region
Name:Cct8_1
Description:chaperonin containing TCP1 subunit 8
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01127,141,825 - 27,141,885EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305452 AgrOrtholog
BioCyc Gene G2FUF-22051 BioCyc
Ensembl Genes ENSRNOG00000001592 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000002169 ENTREZGENE
  ENSRNOT00000002169.8 UniProtKB/TrEMBL
  ENSRNOT00000110898.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.560.10 UniProtKB/TrEMBL
  3.30.260.10 UniProtKB/TrEMBL
  3.50.7.10 UniProtKB/TrEMBL
InterPro Chap_CCT_theta UniProtKB/TrEMBL
  Chaperone_TCP-1 UniProtKB/TrEMBL
  Chaperonin_TCP-1_CS UniProtKB/TrEMBL
  Cpn60/TCP-1 UniProtKB/TrEMBL
  GroEL-like_apical_dom UniProtKB/TrEMBL
  GROEL-like_equatorial UniProtKB/TrEMBL
  TCP-1-like_intermed_sf UniProtKB/TrEMBL
KEGG Report rno:288305 UniProtKB/TrEMBL
NCBI Gene 288305 ENTREZGENE
PANTHER PTHR11353 UniProtKB/TrEMBL
Pfam Cpn60_TCP1 UniProtKB/TrEMBL
PhenoGen Cct8 PhenoGen
PRINTS TCOMPLEXTCP1 UniProtKB/TrEMBL
PROSITE TCP1_1 UniProtKB/TrEMBL
  TCP1_2 UniProtKB/TrEMBL
  TCP1_3 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000001592 RatGTEx
Superfamily-SCOP SSF48592 UniProtKB/TrEMBL
  SSF52029 UniProtKB/TrEMBL
  SSF54849 UniProtKB/TrEMBL
UniProt A0A8I6AAR4_RAT UniProtKB/TrEMBL
  A6JL77 ENTREZGENE, UniProtKB/TrEMBL
  A6JL78 ENTREZGENE, UniProtKB/TrEMBL
  D4ACB8 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-01-13 Cct8  chaperonin containing TCP1 subunit 8  Cct8  chaperonin containing Tcp1, subunit 8 (theta)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-09-29 Cct8  chaperonin containing Tcp1, subunit 8 (theta)  Cct8  chaperonin subunit 8 (theta)   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Cct8  chaperonin subunit 8 (theta)   Cct8_predicted  chaperonin subunit 8 (theta) (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Cct8_predicted  chaperonin subunit 8 (theta) (predicted)      Symbol and Name status set to approved 70820 APPROVED