Dazap1 (DAZ associated protein 1) - Rat Genome Database

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Gene: Dazap1 (DAZ associated protein 1) Rattus norvegicus
Analyze
Symbol: Dazap1
Name: DAZ associated protein 1
RGD ID: 1305280
Description: Orthologous to human DAZAP1 (DAZ associated protein 1); PARTICIPATES IN mRNA decay pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: DAZ-associated protein 1; LOC362836; MGC114376
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8710,074,342 - 10,098,810 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl710,074,849 - 10,095,599 (-)EnsemblGRCr8
mRatBN7.279,423,673 - 9,448,116 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl79,424,178 - 9,538,818 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx712,306,958 - 12,327,717 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0714,182,300 - 14,203,057 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0712,043,664 - 12,064,390 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0712,289,895 - 12,315,897 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl712,290,402 - 12,311,149 (-)Ensemblrn6Rnor6.0
Rnor_5.0712,459,595 - 12,484,021 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4710,935,537 - 10,956,289 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera77,600,951 - 7,621,631 (-)NCBICelera
RGSC_v3.1710,935,536 - 10,956,289 (-)NCBI
Cytogenetic Map7q11NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
1-Hydroxypyrene  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,6-dimethoxyphenol  (ISO)
2,6-dinitrotoluene  (EXP)
4,4'-sulfonyldiphenol  (ISO)
actinomycin D  (ISO)
allethrin  (EXP)
antimony(0)  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
benzatropine  (ISO)
benzo[a]pyrene  (ISO)
beta-lapachone  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
Butylbenzyl phthalate  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
caffeine  (ISO)
chlorpyrifos  (ISO)
cocaine  (EXP)
Cuprizon  (ISO)
cyhalothrin  (EXP)
cypermethrin  (EXP)
diarsenic trioxide  (ISO)
dimethyl sulfoxide  (ISO)
dipotassium bis[mu-tartrato(4-)]diantimonate(2-) trihydrate  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
enzyme inhibitor  (ISO)
fenvalerate  (EXP)
folic acid  (ISO)
formaldehyde  (ISO)
fulvestrant  (ISO)
furfural  (ISO)
ivermectin  (ISO)
josamycin  (ISO)
lead diacetate  (ISO)
lead(0)  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
nimesulide  (EXP)
Nutlin-3  (ISO)
oxaliplatin  (EXP)
paracetamol  (ISO)
pentanal  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenol  (ISO)
pyrethrins  (EXP)
SB 431542  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sodium chloride  (ISO)
Soman  (EXP)
tamoxifen  (ISO)
thiram  (ISO)
titanium dioxide  (ISO)
topotecan  (EXP)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA,ISO)
cytosol  (IEA,ISO)
nucleoplasm  (IEA,ISO)
nucleus  (IEA,ISO)
protein-containing complex  (IEA,ISO)
ribonucleoprotein complex  (IEA,ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. GOA pipeline RGD automated data pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10857750   PMID:11604102   PMID:12185095   PMID:12477932   PMID:15081113   PMID:15647502   PMID:15700540   PMID:16209998   PMID:18669443   PMID:22658674   PMID:22681889   PMID:23636947  


Genomics

Comparative Map Data
Dazap1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8710,074,342 - 10,098,810 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl710,074,849 - 10,095,599 (-)EnsemblGRCr8
mRatBN7.279,423,673 - 9,448,116 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl79,424,178 - 9,538,818 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx712,306,958 - 12,327,717 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0714,182,300 - 14,203,057 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0712,043,664 - 12,064,390 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0712,289,895 - 12,315,897 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl712,290,402 - 12,311,149 (-)Ensemblrn6Rnor6.0
Rnor_5.0712,459,595 - 12,484,021 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4710,935,537 - 10,956,289 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera77,600,951 - 7,621,631 (-)NCBICelera
RGSC_v3.1710,935,536 - 10,956,289 (-)NCBI
Cytogenetic Map7q11NCBI
DAZAP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38191,407,586 - 1,435,684 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl191,407,536 - 1,435,687 (+)Ensemblhg38GRCh38
GRCh37191,407,585 - 1,435,683 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36191,358,584 - 1,386,683 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34191,358,583 - 1,386,683NCBI
Celera191,341,862 - 1,369,681 (+)NCBICelera
Cytogenetic Map19p13.3NCBI
HuRef191,170,341 - 1,210,179 (+)NCBIHuRef
CHM1_1191,407,703 - 1,435,678 (+)NCBICHM1_1
T2T-CHM13v2.0191,377,586 - 1,405,688 (+)NCBIT2T-CHM13v2.0
Dazap1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391080,097,168 - 80,124,242 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1080,097,320 - 80,124,242 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381080,261,362 - 80,288,408 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1080,261,486 - 80,288,408 (+)Ensemblmm10GRCm38
MGSCv371079,727,736 - 79,751,158 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361079,668,226 - 79,691,203 (+)NCBIMGSCv36mm8
Celera1081,279,864 - 81,303,286 (+)NCBICelera
Cytogenetic Map10C1NCBI
cM Map1039.72NCBI
Dazap1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554956,497,890 - 6,524,462 (-)Ensembl
ChiLan1.0NW_0049554956,499,553 - 6,516,227 (-)NCBIChiLan1.0ChiLan1.0
DAZAP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2205,753,608 - 5,781,574 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1194,990,547 - 5,018,509 (+)NCBINHGRI_mPanPan1
PanPan1.1191,391,441 - 1,409,016 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl191,391,764 - 1,408,254 (+)EnsemblpanPan2panpan1.1
DAZAP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12057,411,249 - 57,435,852 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2057,411,825 - 57,435,799 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2057,202,656 - 57,227,082 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02058,141,946 - 58,166,379 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2058,141,947 - 58,166,420 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12057,197,932 - 57,222,358 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02057,677,585 - 57,702,032 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02057,879,614 - 57,904,050 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Dazap1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118217,076,561 - 217,093,531 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936588740,038 - 758,074 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936588730,626 - 758,074 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DAZAP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl277,048,896 - 77,070,453 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1277,048,890 - 77,070,565 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2277,941,175 - 77,962,866 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DAZAP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.161,181,416 - 1,208,784 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl61,181,408 - 1,208,838 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660817,644,771 - 7,684,540 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dazap1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248287,254,361 - 7,284,006 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248287,258,582 - 7,283,931 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Dazap1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11154,595,528 - 154,620,913 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Dazap1
81 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:45
Count of miRNA genes:40
Interacting mature miRNAs:45
Transcripts:ENSRNOT00000046886
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61410Bw19Body weight QTL 196.20.001body mass (VT:0001259)body weight (CMO:0000012)7166965846669658Rat
1300176Hrtrt10Heart rate QTL 103.19heart pumping trait (VT:2000009)heart rate (CMO:0000002)7123748937Rat
9590102Sffal5Serum free fatty acids level QTL 58.620.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)7721609752216097Rat
2290372Gluco33Glucose level QTL 332.71blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)7131777942Rat
1300149Cm6Cardiac mass QTL 64.09heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)71104117804Rat
631503Bp102Blood pressure QTL 1021.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7170952746709527Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)71509236116977875Rat
9590142Scort5Serum corticosterone level QTL 524.40.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)7132612984Rat
1582260Bw72Body weight QTL 723.20.0043body mass (VT:0001259)body weight (CMO:0000012)7139960528Rat
1582261Bw69Body weight QTL 693.20.0048body mass (VT:0001259)body weight (CMO:0000012)7139960528Rat
1582262Bw75Body weight QTL 7530.0038body mass (VT:0001259)body weight (CMO:0000012)7139960528Rat
10059592Kidm45Kidney mass QTL 453.950.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)7946087754460877Rat
2298550Neuinf6Neuroinflammation QTL 63.3nervous system integrity trait (VT:0010566)spinal cord RT1-B protein level (CMO:0002132)7129716167Rat
724560Plsm3Polydactyly-luxate syndrome (PLS) morphotypes QTL 30.0003tibia length (VT:0004357)tibia length (CMO:0000450)7134650782Rat
7411566Bw136Body weight QTL 13610.40.001body mass (VT:0001259)body weight gain (CMO:0000420)7132612984Rat

Markers in Region
RH140052  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.279,431,245 - 9,431,447 (+)MAPPERmRatBN7.2
Rnor_6.0712,297,468 - 12,297,669NCBIRnor6.0
Rnor_5.0712,467,168 - 12,467,369UniSTSRnor5.0
RGSC_v3.4710,942,608 - 10,942,809UniSTSRGSC3.4
Celera77,607,934 - 7,608,135UniSTS
Cytogenetic Map7q11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 161 91 90 59 92 59 6 356 192 11 140 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000021648   ⟹   ENSRNOP00000021648
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl79,535,009 - 9,538,818 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000046886   ⟹   ENSRNOP00000046032
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl79,424,180 - 9,444,929 (-)Ensembl
Rnor_6.0 Ensembl712,290,402 - 12,311,149 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000100123   ⟹   ENSRNOP00000090669
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl79,424,178 - 9,448,078 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000101444   ⟹   ENSRNOP00000088612
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl79,424,180 - 9,536,880 (-)Ensembl
RefSeq Acc Id: NM_001025742   ⟹   NP_001020913
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8710,074,844 - 10,095,599 (-)NCBI
mRatBN7.279,424,175 - 9,444,929 (-)NCBI
Rnor_6.0712,290,397 - 12,311,149 (-)NCBI
Rnor_5.0712,459,595 - 12,484,021 (-)NCBI
RGSC_v3.4710,935,537 - 10,956,289 (-)RGD
Celera77,600,951 - 7,621,631 (-)RGD
Sequence:
RefSeq Acc Id: XM_006240968   ⟹   XP_006241030
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8710,074,342 - 10,095,643 (-)NCBI
mRatBN7.279,423,673 - 9,444,970 (-)NCBI
Rnor_6.0712,289,895 - 12,311,201 (-)NCBI
Rnor_5.0712,459,595 - 12,484,021 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006240969   ⟹   XP_006241031
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8710,074,342 - 10,098,810 (-)NCBI
mRatBN7.279,423,673 - 9,448,116 (-)NCBI
Rnor_6.0712,289,895 - 12,314,327 (-)NCBI
Rnor_5.0712,459,595 - 12,484,021 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006240970   ⟹   XP_006241032
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8710,074,342 - 10,098,810 (-)NCBI
mRatBN7.279,423,673 - 9,448,116 (-)NCBI
Rnor_6.0712,289,895 - 12,314,326 (-)NCBI
Rnor_5.0712,459,595 - 12,484,021 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039079402   ⟹   XP_038935330
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8710,074,342 - 10,095,647 (-)NCBI
mRatBN7.279,423,673 - 9,444,971 (-)NCBI
RefSeq Acc Id: XM_063263744   ⟹   XP_063119814
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8710,074,342 - 10,095,644 (-)NCBI
RefSeq Acc Id: XM_063263745   ⟹   XP_063119815
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8710,074,342 - 10,084,962 (-)NCBI
RefSeq Acc Id: NP_001020913   ⟸   NM_001025742
- UniProtKB: Q4KLZ3 (UniProtKB/TrEMBL),   F2Z3S1 (UniProtKB/TrEMBL),   A0A8I6A8F6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006241032   ⟸   XM_006240970
- Peptide Label: isoform X3
- UniProtKB: A6K8N1 (UniProtKB/TrEMBL),   A0A8I6A8F6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006241031   ⟸   XM_006240969
- Peptide Label: isoform X2
- UniProtKB: A0A8I6ANV1 (UniProtKB/TrEMBL),   A0A8I6A8F6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006241030   ⟸   XM_006240968
- Peptide Label: isoform X1
- UniProtKB: A0A8J8XF56 (UniProtKB/TrEMBL),   A0A8I6A8F6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000046032   ⟸   ENSRNOT00000046886
RefSeq Acc Id: XP_038935330   ⟸   XM_039079402
- Peptide Label: isoform X4
- UniProtKB: A0A8I6A8F6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000088612   ⟸   ENSRNOT00000101444
Ensembl Acc Id: ENSRNOP00000021648   ⟸   ENSRNOT00000021648
Ensembl Acc Id: ENSRNOP00000090669   ⟸   ENSRNOT00000100123
RefSeq Acc Id: XP_063119814   ⟸   XM_063263744
- Peptide Label: isoform X5
- UniProtKB: A0A8I6A8F6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063119815   ⟸   XM_063263745
- Peptide Label: isoform X6
Protein Domains
RRM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q4KLZ3-F1-model_v2 AlphaFold Q4KLZ3 1-405 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13695027
Promoter ID:EPDNEW_R5551
Type:initiation region
Name:Dazap1_1
Description:DAZ associated protein 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0712,311,146 - 12,311,206EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305280 AgrOrtholog
BioCyc Gene G2FUF-34928 BioCyc
Ensembl Genes ENSRNOG00000031387 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000046886 ENTREZGENE
  ENSRNOT00000046886.6 UniProtKB/TrEMBL
  ENSRNOT00000100123 ENTREZGENE
  ENSRNOT00000100123.2 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.330 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7133110 IMAGE-MGC_LOAD
  IMAGE:7133199 IMAGE-MGC_LOAD
InterPro DAZAP1_RRM1 UniProtKB/TrEMBL
  DAZAP1_RRM2 UniProtKB/TrEMBL
  Nucleotide-bd_a/b_plait_sf UniProtKB/TrEMBL
  RBD_domain_sf UniProtKB/TrEMBL
  RRM_dom UniProtKB/TrEMBL
KEGG Report rno:362836 UniProtKB/TrEMBL
MGC_CLONE MGC:114376 IMAGE-MGC_LOAD
  MGC:94347 IMAGE-MGC_LOAD
NCBI Gene 362836 ENTREZGENE
PANTHER RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 UniProtKB/TrEMBL
  RRM DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
Pfam RRM_1 UniProtKB/TrEMBL
PhenoGen Dazap1 PhenoGen
PROSITE RRM UniProtKB/TrEMBL
RatGTEx ENSRNOG00000031387 RatGTEx
SMART RRM UniProtKB/TrEMBL
Superfamily-SCOP SSF54928 UniProtKB/TrEMBL
UniProt A0A8I6A8F6 ENTREZGENE
  A0A8I6ANV1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8J8XF56 ENTREZGENE, UniProtKB/TrEMBL
  A6K8N1 ENTREZGENE, UniProtKB/TrEMBL
  F2Z3S1 ENTREZGENE
  Q4KLZ3 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary F2Z3S1 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-12-06 Dazap1  DAZ associated protein 1  Dazap1_predicted  DAZ associated protein 1 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Dazap1_predicted  DAZ associated protein 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED