Kifap3 (kinesin-associated protein 3) - Rat Genome Database

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Gene: Kifap3 (kinesin-associated protein 3) Rattus norvegicus
Analyze
Symbol: Kifap3
Name: kinesin-associated protein 3
RGD ID: 1305191
Description: Predicted to enable intraciliary transport particle B binding activity; kinesin binding activity; and protein phosphatase binding activity. Predicted to be involved in anterograde dendritic transport of neurotransmitter receptor complex and cilium organization. Predicted to act upstream of or within several processes, including negative regulation of apoptotic process; negative regulation of neuroblast proliferation; and positive regulation of calcium-dependent cell-cell adhesion. Predicted to be located in several cellular components, including microtubule cytoskeleton; periciliary membrane compartment; and photoreceptor cell cilium. Predicted to be part of kinesin II complex. Predicted to be active in several cellular components, including axoneme; ciliary transition zone; and glutamatergic synapse. Orthologous to human KIFAP3 (kinesin associated protein 3); INTERACTS WITH 2,2',5,5'-tetrachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC289168
RGD Orthologs
Human
Mouse
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81378,660,849 - 78,797,821 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1378,660,871 - 78,797,820 (+)EnsemblGRCr8
mRatBN7.21376,127,702 - 76,264,654 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1376,127,696 - 76,264,650 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1378,756,196 - 78,882,717 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01380,065,273 - 80,187,049 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01377,319,837 - 77,441,633 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01382,072,497 - 82,217,256 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1382,072,497 - 82,217,252 (+)Ensemblrn6Rnor6.0
Rnor_5.01386,953,053 - 87,089,644 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41379,544,010 - 79,673,768 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1375,872,613 - 75,998,359 (+)NCBICelera
RGSC_v3.11379,558,313 - 79,686,817 (+)NCBI
Cytogenetic Map13q22NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. GOA pipeline RGD automated data pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8710890   PMID:10793158   PMID:12821668   PMID:15834408   PMID:16298999   PMID:18703627   PMID:19384852   PMID:21037580   PMID:23376485   PMID:24338362  


Genomics

Comparative Map Data
Kifap3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81378,660,849 - 78,797,821 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1378,660,871 - 78,797,820 (+)EnsemblGRCr8
mRatBN7.21376,127,702 - 76,264,654 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1376,127,696 - 76,264,650 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1378,756,196 - 78,882,717 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01380,065,273 - 80,187,049 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01377,319,837 - 77,441,633 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01382,072,497 - 82,217,256 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1382,072,497 - 82,217,252 (+)Ensemblrn6Rnor6.0
Rnor_5.01386,953,053 - 87,089,644 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41379,544,010 - 79,673,768 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1375,872,613 - 75,998,359 (+)NCBICelera
RGSC_v3.11379,558,313 - 79,686,817 (+)NCBI
Cytogenetic Map13q22NCBI
KIFAP3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381169,921,329 - 170,085,184 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1169,921,326 - 170,085,208 (-)Ensemblhg38GRCh38
GRCh371169,890,470 - 170,043,836 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361168,157,094 - 168,310,503 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341166,622,127 - 166,775,537NCBI
Celera1143,000,253 - 143,153,688 (-)NCBICelera
Cytogenetic Map1q24.2NCBI
HuRef1141,112,974 - 141,266,563 (-)NCBIHuRef
CHM1_11171,312,642 - 171,466,210 (-)NCBICHM1_1
T2T-CHM13v2.01169,277,046 - 169,441,099 (-)NCBIT2T-CHM13v2.0
Kifap3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391163,589,711 - 163,744,676 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1163,607,152 - 163,744,678 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381163,762,138 - 163,917,107 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1163,779,583 - 163,917,109 (+)Ensemblmm10GRCm38
MGSCv371165,709,810 - 165,847,231 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361165,616,354 - 165,753,775 (+)NCBIMGSCv36mm8
Celera1166,219,175 - 166,357,571 (+)NCBICelera
Cytogenetic Map1H2.1NCBI
cM Map171.08NCBI
KIFAP3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2179,677,007 - 79,841,101 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1179,349,883 - 79,513,734 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01145,410,755 - 145,564,248 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11149,127,544 - 149,280,831 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1149,127,548 - 149,280,831 (-)EnsemblpanPan2panpan1.1
KIFAP3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1728,581,855 - 28,739,327 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl728,593,425 - 28,739,272 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha728,113,580 - 28,271,198 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0728,383,601 - 28,541,435 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl728,395,164 - 28,542,155 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1728,232,563 - 28,390,147 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0728,267,598 - 28,425,374 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0728,504,316 - 28,661,873 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Kifap3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934498,789,040 - 98,930,697 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648116,663,974 - 16,779,428 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493648116,664,025 - 16,777,440 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIFAP3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl480,921,682 - 81,108,360 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1480,922,032 - 81,105,135 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2488,552,950 - 88,734,332 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KIFAP3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12558,983,180 - 59,130,431 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2558,983,207 - 59,130,074 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605560,638,540 - 60,786,174 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kifap3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462480510,416,095 - 10,504,234 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462480510,381,217 - 10,521,349 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Kifap3
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11043,011,944 - 43,134,689 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Kifap3
1186 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:167
Count of miRNA genes:123
Interacting mature miRNAs:146
Transcripts:ENSRNOT00000063810
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134863963493639634Rat
10755495Bp387Blood pressure QTL 3873.78arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133721624190057603Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1338975045103588154Rat
8655951Rf63Renal function QTL 6312.2blood urea nitrogen amount (VT:0005265)plasma urea nitrogen level (CMO:0000586)1371610804109350286Rat
70220Bp55Blood pressure QTL 555.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133992469384924693Rat
8655945Rf61Renal function QTL 613.6blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)137161080489333251Rat
71119Thym2Thymus enlargement QTL 23.8thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)134874981487285480Rat
4889861Pur29Proteinuria QTL 2913.80.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)133996821183286298Rat
1331783Bp221Blood pressure QTL 2213.72886arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)137161080489333251Rat
8655959Pur32Proteinuria QTL 328.4urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)137298450699745408Rat
1300166Kidm6Kidney mass QTL 63.93kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)137161080489333251Rat
2293687Bss26Bone structure and strength QTL 264.60.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1367635937109350286Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13742179187286911Rat
61340Bp25Blood pressure QTL 254.20.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133708798382087983Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13600200888706694Rat
1549897Stresp12Stress response QTL 123.35stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)134098358585983585Rat
724564Uae11Urinary albumin excretion QTL 115.7urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)134735425894285672Rat
738027Lnnr6Liver neoplastic nodule remodeling QTL 63.3liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)1365613454109350286Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1321120177109350286Rat
7387280Uae43Urinary albumin excretion QTL 435.690.4174urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1368983334109350286Rat
738026Lnnr5Liver neoplastic nodule remodeling QTL 53.29liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)136242459288113509Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133379409678794096Rat
2293702Bss34Bone structure and strength QTL 344.610.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1367635937109350286Rat
61349Bp31Blood pressure QTL 315.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133992469384924693Rat
1576318Schws5Schwannoma susceptibility QTL 50.0351nervous system integrity trait (VT:0010566)post-insult time to trigeminal nerve neurilemmoma formation (CMO:0002019)1364497900109350286Rat
2303563Bw89Body weight QTL 896body mass (VT:0001259)body weight (CMO:0000012)133483494779834947Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1311081740103588154Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13600200888706694Rat
12879477Bp401Blood pressure QTL 401arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133981472684814726Rat
1331750Bp220Blood pressure QTL 2202.98arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133996821184968211Rat
12879475Bp400Blood pressure QTL 400arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1364375743109350286Rat
11530006Niddm72Non-insulin dependent diabetes mellitus QTL 720.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)133828629883286298Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131103588154Rat
2293341Glom15Glomerulus QTL 159.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1367635937109350286Rat

Markers in Region
RH130610  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21376,264,454 - 76,264,654 (+)MAPPERmRatBN7.2
Rnor_6.01382,217,057 - 82,217,256NCBIRnor6.0
Rnor_5.01387,089,449 - 87,089,648UniSTSRnor5.0
RGSC_v3.41379,673,573 - 79,673,772UniSTSRGSC3.4
Celera1375,998,164 - 75,998,363UniSTS
RH 3.4 Map13477.1UniSTS
Cytogenetic Map13q22UniSTS
RH141990  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21376,263,577 - 76,263,770 (+)MAPPERmRatBN7.2
Rnor_6.01382,216,180 - 82,216,372NCBIRnor6.0
Rnor_5.01387,088,572 - 87,088,764UniSTSRnor5.0
RGSC_v3.41379,672,696 - 79,672,888UniSTSRGSC3.4
Celera1375,997,287 - 75,997,479UniSTS
RH 3.4 Map13481.4UniSTS
Cytogenetic Map13q22UniSTS
AA850497  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21376,263,866 - 76,264,046 (+)MAPPERmRatBN7.2
Rnor_6.01382,216,469 - 82,216,648NCBIRnor6.0
Rnor_5.01387,088,861 - 87,089,040UniSTSRnor5.0
RGSC_v3.41379,672,985 - 79,673,164UniSTSRGSC3.4
Celera1375,997,576 - 75,997,755UniSTS
RH 3.4 Map13475.8UniSTS
Cytogenetic Map13q22UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000063810   ⟹   ENSRNOP00000063896
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1378,671,301 - 78,797,820 (+)Ensembl
mRatBN7.2 Ensembl1376,137,978 - 76,264,650 (+)Ensembl
Rnor_6.0 Ensembl1382,072,497 - 82,217,252 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000085135   ⟹   ENSRNOP00000071523
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1378,660,879 - 78,796,688 (+)Ensembl
mRatBN7.2 Ensembl1376,127,696 - 76,263,916 (+)Ensembl
Rnor_6.0 Ensembl1382,072,596 - 82,212,157 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000095640   ⟹   ENSRNOP00000093594
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1378,660,871 - 78,797,820 (+)Ensembl
mRatBN7.2 Ensembl1376,140,727 - 76,238,102 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000102502   ⟹   ENSRNOP00000085155
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1378,671,497 - 78,797,820 (+)Ensembl
mRatBN7.2 Ensembl1376,145,245 - 76,238,102 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000112619   ⟹   ENSRNOP00000082498
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1378,671,272 - 78,797,820 (+)Ensembl
mRatBN7.2 Ensembl1376,138,171 - 76,264,647 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000127004   ⟹   ENSRNOP00000102601
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1378,671,285 - 78,797,820 (+)Ensembl
RefSeq Acc Id: NM_001401347   ⟹   NP_001388276
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81378,671,301 - 78,797,821 (+)NCBI
mRatBN7.21376,138,123 - 76,264,654 (+)NCBI
RefSeq Acc Id: XM_039090489   ⟹   XP_038946417
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81378,660,849 - 78,797,821 (+)NCBI
mRatBN7.21376,127,702 - 76,264,654 (+)NCBI
RefSeq Acc Id: XM_039090490   ⟹   XP_038946418
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81378,660,862 - 78,796,635 (+)NCBI
mRatBN7.21376,127,702 - 76,263,919 (+)NCBI
RefSeq Acc Id: XM_063272116   ⟹   XP_063128186
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81378,671,159 - 78,796,635 (+)NCBI
Ensembl Acc Id: ENSRNOP00000071523   ⟸   ENSRNOT00000085135
Ensembl Acc Id: ENSRNOP00000063896   ⟸   ENSRNOT00000063810
RefSeq Acc Id: XP_038946417   ⟸   XM_039090489
- Peptide Label: isoform X1
- UniProtKB: A0A0G2K0P1 (UniProtKB/TrEMBL),   A0A8I5ZXB9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038946418   ⟸   XM_039090490
- Peptide Label: isoform X2
- UniProtKB: A6IDC5 (UniProtKB/TrEMBL),   D3ZWA5 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000085155   ⟸   ENSRNOT00000102502
Ensembl Acc Id: ENSRNOP00000093594   ⟸   ENSRNOT00000095640
Ensembl Acc Id: ENSRNOP00000082498   ⟸   ENSRNOT00000112619
RefSeq Acc Id: NP_001388276   ⟸   NM_001401347
- UniProtKB: A0A8I5ZXB9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063128186   ⟸   XM_063272116
- Peptide Label: isoform X3
- UniProtKB: A0A8I5ZXB9 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000102601   ⟸   ENSRNOT00000127004

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K0P1-F1-model_v2 AlphaFold A0A0G2K0P1 1-773 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698959
Promoter ID:EPDNEW_R9474
Type:initiation region
Name:Kifap3_2
Description:kinesin-associated protein 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R9475  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01382,072,599 - 82,072,659EPDNEW
RGD ID:13698950
Promoter ID:EPDNEW_R9475
Type:multiple initiation site
Name:Kifap3_1
Description:kinesin-associated protein 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R9474  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01382,072,809 - 82,072,869EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305191 AgrOrtholog
BioCyc Gene G2FUF-17621 BioCyc
Ensembl Genes ENSRNOG00000002544 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000063810 ENTREZGENE
  ENSRNOT00000063810.5 UniProtKB/TrEMBL
  ENSRNOT00000085135 ENTREZGENE
  ENSRNOT00000085135.3 UniProtKB/TrEMBL
  ENSRNOT00000095640 ENTREZGENE
  ENSRNOT00000095640.2 UniProtKB/TrEMBL
  ENSRNOT00000102502.2 UniProtKB/TrEMBL
  ENSRNOT00000112619 ENTREZGENE
  ENSRNOT00000112619.2 UniProtKB/TrEMBL
  ENSRNOT00000127004.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.10.10 UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/TrEMBL
  Armadillo UniProtKB/TrEMBL
  KAP UniProtKB/TrEMBL
NCBI Gene 289168 ENTREZGENE
PANTHER KAP UniProtKB/TrEMBL
  KINESIN-ASSOCIATED PROTEIN 3 UniProtKB/TrEMBL
Pfam KAP UniProtKB/TrEMBL
PhenoGen Kifap3 PhenoGen
PROSITE ARM_REPEAT UniProtKB/TrEMBL
RatGTEx ENSRNOG00000002544 RatGTEx
SMART ARM UniProtKB/TrEMBL
  KAP UniProtKB/TrEMBL
Superfamily-SCOP ARM-type_fold UniProtKB/TrEMBL
UniProt A0A0G2K0P1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZXB9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A2N6_RAT UniProtKB/TrEMBL
  A0A8I6AJW9_RAT UniProtKB/TrEMBL
  A0ABK0LH25_RAT UniProtKB/TrEMBL
  A6IDC5 ENTREZGENE, UniProtKB/TrEMBL
  D3ZWA5 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Kifap3  kinesin-associated protein 3   Kifap3_predicted  kinesin-associated protein 3 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Kifap3_predicted  kinesin-associated protein 3 (predicted)      Symbol and Name status set to approved 70820 APPROVED