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Gene: Marchf1 (membrane associated ring-CH-type finger 1) Rattus norvegicus

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Symbol:

Marchf1

Name:

membrane associated ring-CH-type finger 1

RGD ID:

1305148

Description:

Predicted to enable MHC protein binding activity and ubiquitin protein ligase activity. Predicted to be involved in antigen processing and presentation of peptide antigen via MHC class II; immune response; and protein polyubiquitination. Predicted to be located in several cellular components, including endoplasmic reticulum membrane; lysosomal membrane; and trans-Golgi network membrane. Predicted to be active in early endosome membrane; late endosome membrane; and lysosome. Orthologous to human MARCHF1 (membrane associated ring-CH-type finger 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 4,4'-diaminodiphenylmethane.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

E3 ubiquitin-protein ligase MARCH1; E3 ubiquitin-protein ligase MARCH1-like; E3 ubiquitin-protein ligase MARCHF1; LOC100910061; LOC361135; March1; membrane-associated ring finger (C3HC4) 1; membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase; RGD1305148; similar to hypothetical protein FLJ20668

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	28,022,159 - 28,880,872 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	16	28,022,159 - 28,881,054 (-)	Ensembl				GRCr8
mRatBN7.2	16	23,255,551 - 24,114,290 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	23,258,799 - 24,114,277 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	16	26,618,960 - 27,482,348 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	30,053,672 - 30,917,036 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	25,992,293 - 26,875,346 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	24,998,709 - 25,856,327 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	25,001,666 - 25,192,675 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	16	24,882,375 - 25,407,999 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	16	24,971,361 - 25,496,590 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	16	23,375,326 - 23,888,905 (-)	NCBI		Celera
RGSC_v3.1	16	24,971,358 - 25,055,466 (-)	NCBI
Cytogenetic Map	16	p14-p13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

COVID-19 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

4,4'-diaminodiphenylmethane (EXP)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

antirheumatic drug (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

Benzo[k]fluoranthene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

bromobenzene (EXP)

Butylbenzyl phthalate (ISO)

calcitriol (ISO)

carbamazepine (ISO)

CGP 52608 (ISO)

chlordecone (ISO)

chloroprene (ISO)

choline (ISO)

cisplatin (ISO)

cobalt dichloride (ISO)

Cuprizon (EXP)

diclofenac (ISO)

dorsomorphin (ISO)

ethanol (ISO)

furan (EXP)

Licochalcone B (ISO)

lipopolysaccharide (ISO)

methapyrilene (ISO)

methylmercury chloride (ISO)

N-methyl-4-phenylpyridinium (ISO)

nickel atom (ISO)

O-methyleugenol (ISO)

okadaic acid (ISO)

ozone (ISO)

p-chloromercuribenzoic acid (ISO)

paracetamol (ISO)

potassium chromate (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

SB 431542 (ISO)

tetraphene (ISO)

thimerosal (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

trichloroethene (EXP)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

antigen processing and presentation of peptide antigen via MHC class II (ISO)

immune response (ISO)

immune system process (IEA)

protein polyubiquitination (ISO)

Cellular Component

cytoplasmic vesicle (IEA)

cytoplasmic vesicle membrane (IEA)

early endosome membrane (IEA,ISO)

endoplasmic reticulum membrane (ISO)

endosome (ISO)

late endosome membrane (ISO)

lysosomal membrane (IEA,ISO)

lysosome (ISO)

plasma membrane (ISO)

trans-Golgi network membrane (ISO)

Molecular Function

metal ion binding (IEA)

MHC protein binding (ISO)

ubiquitin protein ligase activity (ISO)

ubiquitin-protein transferase activity (ISO)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:14722266	PMID:17255932	PMID:18305173	PMID:18389477	PMID:19117940	PMID:19880452	PMID:19917682	PMID:27577745

Genomics

Comparative Map Data

Marchf1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	28,022,159 - 28,880,872 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	16	28,022,159 - 28,881,054 (-)	Ensembl				GRCr8
mRatBN7.2	16	23,255,551 - 24,114,290 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	23,258,799 - 24,114,277 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	16	26,618,960 - 27,482,348 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	30,053,672 - 30,917,036 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	25,992,293 - 26,875,346 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	24,998,709 - 25,856,327 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	25,001,666 - 25,192,675 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	16	24,882,375 - 25,407,999 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	16	24,971,361 - 25,496,590 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	16	23,375,326 - 23,888,905 (-)	NCBI		Celera
RGSC_v3.1	16	24,971,358 - 25,055,466 (-)	NCBI
Cytogenetic Map	16	p14-p13	NCBI

MARCHF1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	163,524,298 - 164,384,019 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	163,524,298 - 164,384,050 (-)	Ensembl			hg38	GRCh38
GRCh37	4	164,445,450 - 165,305,171 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	164,668,499 - 164,754,226 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	4	164,806,653 - 164,892,381	NCBI
Celera	4	161,777,720 - 162,636,895 (-)	NCBI		Celera
Cytogenetic Map	4	q32.2-q32.3	NCBI
HuRef	4	160,199,325 - 161,058,221 (-)	NCBI		HuRef
CHM1_1	4	164,421,900 - 165,280,873 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	4	166,872,170 - 167,731,735 (-)	NCBI		T2T-CHM13v2.0

Marchf1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	66,070,558 - 66,925,761 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	66,070,552 - 66,924,289 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	8	65,618,009 - 66,472,841 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	65,617,900 - 66,471,637 (+)	Ensembl			mm10	GRCm38
MGSCv37	8	68,141,939 - 68,995,536 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	8	68,547,514 - 69,399,416 (+)	NCBI		MGSCv36	mm8
Celera	8	68,174,462 - 69,027,711 (+)	NCBI		Celera
Cytogenetic Map	8	B3.1	NCBI
cM Map	8	33.06	NCBI

Marchf1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	41,060,246 - 41,484,734 (+)	Ensembl
ChiLan1.0	NW_004955403	41,187,039 - 41,484,734 (+)	NCBI	ChiLan1.0	ChiLan1.0

MARCHF1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	161,340,439 - 162,192,916 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	161,702,902 - 162,551,136 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	155,791,599 - 156,639,456 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	167,579,850 - 168,692,736 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	167,583,874 - 168,153,648 (-)	Ensembl			panPan2	panpan1.1

MARCHF1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	59,753,597 - 60,279,692 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	59,753,216 - 60,036,060 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	60,118,313 - 60,912,318 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	60,512,737 - 61,307,283 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	60,513,004 - 60,795,213 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	59,745,776 - 60,561,370 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	59,837,018 - 60,638,108 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	60,206,169 - 61,004,664 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Marchf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404943	16,472,621 - 17,186,316 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936555	1,610,268 - 2,097,985 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936555	1,810,896 - 2,097,870 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MARCHF1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	52,375,514 - 52,951,033 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	8	52,375,510 - 52,951,031 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	55,502,841 - 55,523,454 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MARCHF1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	7	109,978,620 - 110,783,623 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	7	109,979,056 - 110,063,661 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666037	89,799,273 - 90,615,833 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Marchf1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624758	12,878,810 - 13,319,814 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624758	12,528,242 - 13,321,851 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Marchf1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	13	22,787,840 - 23,291,759 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Marchf1
5790 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	146
Count of miRNA genes:	112
Interacting mature miRNAs:	122
Transcripts:	ENSRNOT00000032289
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
7411664	Foco30	Food consumption QTL 30	11	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	16	4354822	49354822	Rat
1600378	Arunc4	Aerobic running capacity QTL 4		0.03	exercise endurance trait (VT:0002332)	longest distance run on treadmill (CMO:0001406)	16	387123	45387123	Rat
1549842	Bp248	Blood pressure QTL 248		0.01	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	16	387123	45387123	Rat
70183	BpQTLcluster13	Blood pressure QTL cluster 13	3.654		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	16	4234212	49757901	Rat
2307172	Activ4	Activity QTL 4	3.71	0.00023	locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	16	1	33425095	Rat
737826	Alc11	Alcohol consumption QTL 11	3.2		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	16	4234212	66955197	Rat
2302057	Pia29	Pristane induced arthritis QTL 29	3.6	0.001	blood autoantibody amount (VT:0003725)	serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)	16	28468701	73468701	Rat
1354584	Despr6	Despair related QTL 6	3.1	0.0067	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	16	1	39568015	Rat
2303566	Bw90	Body weight QTL 90	2		body mass (VT:0001259)	body weight (CMO:0000012)	16	1	39568015	Rat
737819	Hcas4	Hepatocarcinoma susceptibility QTL 4	4.43		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	16	4234212	53708481	Rat
2312663	Slep9	Serum leptin concentration QTL 9		0.001	blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	16	839086	66195506	Rat
2306902	Bp339	Blood pressure QTL 339		0.01	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	16	3386790	49757901	Rat
1354625	Despr7	Despair related QTL 7	3.16	0.016	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	16	4744222	49744222	Rat
2312660	Bw95	Body weight QTL 95		0.05	inguinal fat pad mass (VT:0010424)	inguinal fat pad weight to body weight ratio (CMO:0001253)	16	839086	66195506	Rat
2312666	Insul16	Insulin level QTL 16		0.01	blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	16	839086	66195506	Rat
70205	Gcr3	Gastric cancer resistance QTL 3	2.3		stomach morphology trait (VT:0000470)	stomach tumor diameter (CMO:0001889)	16	17730818	72536785	Rat
2293343	Glom16	Glomerulus QTL 16	7.4		kidney glomerulus integrity trait (VT:0010546)	kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)	16	839086	52786090	Rat
2301406	Kidm39	Kidney mass QTL 39		0.002	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	16	15905802	60905802	Rat
2312669	Stl23	Serum triglyceride level QTL 23		0.01	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	16	839086	66195506	Rat
6903319	Bw114	Body weight QTL 114	2.7	0.0037	body mass (VT:0001259)	body weight (CMO:0000012)	16	3301683	48301683	Rat

Markers in Region

D16Got26

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	23,688,200 - 23,688,376 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	25,431,274 - 25,431,449	NCBI	Rnor6.0
Rnor_5.0	16	25,314,487 - 25,314,662	UniSTS	Rnor5.0
RGSC_v3.4	16	25,403,389 - 25,403,562	RGD	RGSC3.4
RGSC_v3.4	16	25,403,387 - 25,403,562	UniSTS	RGSC3.4
Celera	16	23,795,727 - 23,795,902	UniSTS
RGSC_v3.1	16	25,403,387 - 25,403,560	RGD
RH 3.4 Map	16	286.9	UniSTS
RH 3.4 Map	16	286.9	RGD
RH 2.0 Map	16	329.9	RGD
Cytogenetic Map	16	p14-p13	UniSTS

RH144480

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	23,610,577 - 23,610,709 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	25,353,878 - 25,354,009	NCBI	Rnor6.0
Rnor_5.0	16	25,237,091 - 25,237,222	UniSTS	Rnor5.0
RGSC_v3.4	16	25,324,990 - 25,325,121	UniSTS	RGSC3.4
Celera	16	23,718,102 - 23,718,233	UniSTS
RH 3.4 Map	16	285.3	UniSTS
Cytogenetic Map	16	p14-p13	UniSTS

BI301985

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	23,398,620 - 23,398,812 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	25,140,824 - 25,141,015	NCBI	Rnor6.0
Rnor_5.0	16	25,024,490 - 25,024,681	UniSTS	Rnor5.0
RGSC_v3.4	16	25,110,842 - 25,111,033	UniSTS	RGSC3.4
Celera	16	23,513,636 - 23,513,827	UniSTS
RH 3.4 Map	16	290.3	UniSTS
Cytogenetic Map	16	p14-p13	UniSTS

RH138482

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	23,257,973 - 23,258,120 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	26,077,239 - 26,077,385	NCBI	Rnor6.0
Rnor_6.0	16	24,999,993 - 25,000,139	NCBI	Rnor6.0
Rnor_5.0	16	25,962,945 - 25,963,091	UniSTS	Rnor5.0
Rnor_5.0	16	24,883,659 - 24,883,805	UniSTS	Rnor5.0
RGSC_v3.4	16	24,969,688 - 24,969,834	UniSTS	RGSC3.4
Celera	16	23,373,653 - 23,373,799	UniSTS
RH 3.4 Map	16	281.2	UniSTS
Cytogenetic Map	16	p14-p13	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	63	161	87	86	55	92	55	6	334	188	11	140	67	81	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001135838	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001401505	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008771133	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008771134	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600180	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017600181	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039094632	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039094633	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039094634	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039094635	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275512	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063275513	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ230739	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000032289 ⟹ ENSRNOP00000038896

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	16	23,258,799 - 23,781,405 (-)	Ensembl
Rnor_6.0 Ensembl	16	25,001,666 - 25,192,675 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000082578 ⟹ ENSRNOP00000096247

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	16	23,258,799 - 24,114,277 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000110592 ⟹ ENSRNOP00000092175

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	28,025,254 - 28,881,054 (-)	Ensembl
mRatBN7.2 Ensembl	16	23,258,799 - 24,114,277 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000148808 ⟹ ENSRNOP00000102883

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	28,022,159 - 28,577,292 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000157784 ⟹ ENSRNOP00000101945

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	28,022,159 - 28,548,113 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000160934 ⟹ ENSRNOP00000100848

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	28,022,159 - 28,548,113 (-)	Ensembl

RefSeq Acc Id:

NM_001135838 ⟹ NP_001129310

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	28,022,159 - 28,880,839 (-)	NCBI
mRatBN7.2	16	23,255,551 - 24,114,253 (-)	NCBI
Rnor_6.0	16	25,001,666 - 25,524,786 (-)	NCBI
Rnor_5.0	16	24,882,375 - 25,407,999 (-)	NCBI
RGSC_v3.4	16	24,971,361 - 25,496,590 (-)	RGD
Celera	16	23,375,326 - 23,888,905 (-)	RGD

Sequence:

show sequence

ATGCCCCTCCACCAGATTTCTGTAATCCCAGCCCGGGAGACAGCCAGCAATGGGAGAAGTTCAA
TGGGCAGAAACAAAGAGAAGAACAAGGAAGTTGAGAATGAAAAGTCCCCAGGGCGATCTGCAAG
TCGATCAAGTAACATATCAAAAGCAAGCAGCCCAACGACAGGGACAGCTCCCAGGAGCCAGTCA
AGGTTGTCTGTCTGTCCATCTACTCAAGACATCTGCAGGATCTGTCACTGCGAAGGAGATGAAG
AGAGCCCACTCATCACACCCTGTCGCTGCACAGGAACCTTGCGCTTTGTCCACCAGTCCTGTCT
CCACCAGTGGATCAAGAGCTCAGACACACGGTGCTGTGAGCTCTGCAAGTATGACTTCATAATG
GAAACCAAGCTCAAGCCCCTGCGGAAGTGGGAAAAGCTCCAGATGACCACGAGCGAAAGGAGGA
AAATATTCTGCTCTGTCACGTTCCACGTCATCGCCGTCACCTGCGTGGTGTGGTCCTTGTATGT
GTTGATAGACCGGACAGCGGAGGAAATCAAGCAAGGTAACGACAATGGTGTGCTGGAGTGGCCA
TTTTGGACAAAACTGGTTGTGGTGGCCATCGGCTTCACAGGAGGTCTCGTCTTCATGTATGTAC
AGTGTAAAGTCTACGTCCAGCTGTGGCGCAGGCTGAAGGCCTACAACCGTGTGATCTTTGTGCA
GAATTGCCCAGACACTGCCAACAAACTGGAGAAGAACTTCCCGTGTAATGTGAACACGGAAGGC
AAGGATGCTGTGGTTGTGCCTGTGCCACAGACAGGTTCGAATACACTGCCAACTGCAGAGGGGG
CCCCGCCTGAAGTTATACCAGTCTGA

hide sequence

RefSeq Acc Id:

NM_001401505 ⟹ NP_001388434

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	28,022,159 - 28,880,839 (-)	NCBI
mRatBN7.2	16	23,255,551 - 24,114,253 (-)	NCBI

RefSeq Acc Id:

XM_008771134 ⟹ XP_008769356

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	28,022,159 - 28,880,857 (-)	NCBI
mRatBN7.2	16	23,255,554 - 24,114,274 (-)	NCBI
Rnor_6.0	16	24,998,709 - 25,378,795 (-)	NCBI

Sequence:

show sequence

GTAGGAAACTCTTTTTGTATGTTAACAATGTATGCTTTGAAAAGATGCACTTTTTACACTATGC
AGTGGCTCTGGGACAAGATTATTAATAATTGGTAATCCTTATTTCTTCTCCATGATTTCTAGTT
AAAGTAAAACCTCTCCATTAGTATTTCATTCAAATTTGGGGATTAAAACATTTCAATTATATGT
ATTTTCCAGACCATAACTATGAGAAATGATGTGTTTCAGGGAATGTAAATTATTTTCAGAATTT
CAGGAATTGAAAGGGGAAAAGAGGAAGGAAACAATGCTGGGCTGGTGTGAAGCGATAGCCCGCA
ACCCTCACAGAATCCCAAACGCCACACGGACACCAGAGACTTCAGGGGATGTGGCGGATGCCTC
CCAAACCTCCACGCTGAATGAAAAGTCCCCAGGGCGATCTGCAAGTCGATCAAGTAACATATCA
AAAGCAAGCAGCCCAACGACAGGGACAGCTCCCAGGAGCCAGTCAAGGTTGTCTGTCTGTCCAT
CTACTCAAGACATCTGCAGGATCTGTCACTGCGAAGGAGATGAAGAGAGCCCACTCATCACACC
CTGTCGCTGCACAGGAACCTTGCGCTTTGTCCACCAGTCCTGTCTCCACCAGTGGATCAAGAGC
TCAGACACACGGTGCTGTGAGCTCTGCAAGTATGACTTCATAATGGAAACCAAGCTCAAGCCCC
TGCGGAAGTGGGAAAAGCTCCAGATGACCACGAGCGAAAGGAGGAAAATATTCTGCTCTGTCAC
GTTCCACGTCATCGCCGTCACCTGCGTGGTGTGGTCCTTGTATGTGTTGATAGACCGGACAGCG
GAGGAAATCAAGCAAGGTGTGCTGGAGTGGCCATTTTGGACAAAACTGGTTGTGGTGGCCATCG
GCTTCACAGGAGGTCTCGTCTTCATGTATGTACAGTGTAAAGTCTACGTCCAGCTGTGGCGCAG
GCTGAAGGCCTACAACCGTGTGATCTTTGTGCAGAATTGCCCAGACACTGCCAACAAACTGGAG
AAGAACTTCCCGTGTAATGTGAACACGGAAGGCAAGGATGCTGTGGTTGTGCCTGTGCCACAGA
CAGGTTCGAATACACTGCCAACTGCAGAGGGGGCCCCGCCTGAAGTTATACCAGTCTGATGGAA
CTGGACGGGAACTTCTTCACGGAAGGATCTCTGCAACCCCCAGCCACTACGAACAGAAGTGCGT
CTGCGCTGGTGGCTTCTTGAGCTTCTCGTTTCCCTTACTGACTTGTTTGTCCTGACTTGGAGCA
AAAAGGAAATGAGAAGAAAATAACACGTGACCAGGATCTCAAGAAGCAGAGCCTGCAGTGGGAC
CTGGAAAGGTGAAGAATCTTAGGGAAGGAGTTCATAAGGAATGGTTGGTACGAGCCAGTCTTCC
AAGGGGATGGACACGTGATACTCCGAGTAGTGCAGAGGAAATTCCTGAACAGACTTCAATTGCA
ATGTATGCTTCTTTGTAGGGTTCTGTAACGTTAGCCTTCTCCACTGGAAACGACACCCACCCAC
ACATTTGGTCTTAAGCCTGAAATTGTGTGCATCATCCCTAAGTCACACCAGAAGTAAACTTGGA
GGACCTGAGAGGTTTTTTTAAAAAATACTTTTGACAGCTGTTTTTTCTGGCTATTGTGAAGTCT
GGTTATTTTGACAGATGCATGTTTTTAAGTGGATGCAATACACATTTGGGGATAGAAATGTTTG
GAATTTTGTTTCAATGATGAAGAGATTTTCAGAGCATCGTGAAGTTTAGCTAGAACTGTTTTTT
GAGCAACTATCATGCTGTGGGGTTCTTTCTTGTTGTTGTTGTTGCTGTTGTTGTTTTTTCTGGT
CCCTCTTACACAGTGCTCAACAATAGACATATAACATGAGCTACAAATACAACCACAGTTGTAA
ATCTTAAATCTCCTAGTGTGCCCCATTAGGAAAAGTAAAAATAAATAGGTCAATCAATTTTTAT
AATTTACTTAACACTATTTATACAAGTTACTTTATGTCATCAATGGAAACAATTATAAAAATAG
CTTTCATTATTTTCTTGAACCAATTCTTCAAAATTCTGCATGGACACCTCAATATGAATGAAGT
GTGTTGGACAGGACCTAATTAAGAATATCAGCTGCCAGAGCCCTTGGATTAGAAACTGCATCTC
TGTTTCATTTAAGTTATTTTAAAACAGCAGTTTAATCCATCTTTCTGTTTTGCAGTTTCATCTA
AAGGTTACGATTTACAAGCACCAAACTCACCAAATTAAGTAACCTGGTTTGATTTCAACCAAGT
TTCAAAGGGGCGAAAAAATCTAAGGTATAGGAAGTCAGTAAAATGTGTAGCAATGTTATGAAGG
TAACTTCTGCATAGAAACTATAAAGTAACTATGATAGGGAAATAAACATTTATTTTGCTACTAA
ATCAGGTGTTAAGGATTTTAAATCCACATGAAGTATCAACGTGACACGGGTATCTTAAGGACCT
CAACCCCACGTTTGAACCTGACAGTATTTTCCTCACTCAGCTCATTCAATACATTCCATGGTGA
GTGATAAGCTGCGTTGTGGGCCCAACACCTGATTACAGCTCTACACAGATTCCAATAAACTGAT
ATGAGAACTACCATGAGTGGGTGAATACTCACAAACCGTGACCTGTCAAAACCAGACAGCCACC
TTGTTTTAAAGTGACTTTTGTTGTCGTTGTTAGCTGTCATTATTTATTATCCTGAAAAGGCAGA
GATGGCCATAAAAACCAAAGCATGGGCATCATGTTGCACAACTCTGGGTTCCATATCCATGCAC
TTTGTAATAATCAGTGTTTGTTCTTCGTGGATGATAAAGGAAAAGGAAAAACAAAAGGATCCTT
CAATGAGAAGAGTATTTGTGGTGATTGACACTGGATCCAAATAGTCCCACCCTTAGAAATAGAC
ATAGTAAACAATGTCAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
ACATGTATATTCATGTATATATGCAAGAGAAATGTTAAGGTCAAGCCAAGAAACAAAGGGTTAA
TACTCATCTTCCTTAAAAGTGTGCAGGAGGGACATGGCGTCAATAGACACAGACAAAGCAATGG
ACATGACTGATGTAGACCAGGCCTTCAGCACAAATAAGCAGAACCTTGCATTAACTTCCTGAAA
GGTTCCATTCTAAAGATTTAAGAACAGGAAGAGCAGAGGAAGGGCGGGTGCTCTGTAAGTTCAC
ACAAAGGCATTAACCATCGTTTAGTTTCTCTGTATAGTTCTCCGCGCGCTTCCTAGGATGGCAA
TTTGTTGTGGACCAGGACTGCACAAGAAGAGGTCTACATCTTCTTGCAAGTAAAGTGCAAAGTA
AAACTGATTTATCTTTTCCCCGCAGAAAATATACCTTACTTACCACAGAAAAAACTATCTAAAA
GCAAGATGGTTATTTGAATAGCTTGTTTCACAGAGGAAGGAGATTGGCTCCATCATATTTTTCA
AGGTGTATACCACCACTAAACTAAACAGAAAAGAGACAAGCTTTGCTACAATGGGGAAAGACAG
CATGCTGCTTTAAAAGTGACAGCTACATGCTGCAGGTTAACTACTGTAAGCTTTGCCTTTAAAT
GAGAATGATGGAATTCTACAGTGTATGCACCACTCAGTGATTATGCTGATATCCTCTGATGCTT
TAAAACTCACAAAAGTTTTTTCCTCTAAATTATTACCTGAATTTACTATTTATGATTCAAACAA
TCTGCCCTAACTATTCATGTATATAATAGAGATGTAGGACCCGTACTCCTAATATTTGAGAAGT
TTAGGACTTCAGGGGTATCCCAAATTAAAGCCAGCCCAGACTACATGAGACCTTTCTCCAAAAG
TAAAACAAAGATTTTAAACTCAATGAATAAAGCCAGTATTAAAAACATCTCTTCATATTGTGTG
GTAATGGTGTTTTCTCCTAATAACCATGAAAAGGTTTGGCATTGATGGCCTGACATACTGCTCA
AAGAGAAAAAAGAATGGCATTATCTTGAAGTGTGTTTACCTGCTTTCATGTAAAAAATAAAGTG
AAATTGAA

hide sequence

RefSeq Acc Id:

XM_017600175 ⟹ XP_017455664

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	28,022,159 - 28,548,043 (-)	NCBI
mRatBN7.2	16	23,255,554 - 23,781,400 (-)	NCBI
Rnor_6.0	16	24,998,709 - 25,378,797 (-)	NCBI

Sequence:

show sequence

GTGTAGGAAACTCTTTTTGTATGTTAACAATGTATGCTTTGAAAAGATGCACTTTTTACACTAT
GCAGTGGCTCTGGGACAAGATTATTAATAATTGGTAATCCTTATTTCTTCTCCATGATTTCTAG
TTAAAGTAAAACCTCTCCATTAGTATTTCATTCAAATTTGGGGATTAAAACATTTCAATTATAT
GTATTTTCCAGACCATAACTATGAGAAATGATGTGTTTCAGGGAATGTAAATTATTTTCAGAAT
TTCAGGAATTGAAAGGGGAAAAGAGGAAGGAAACAATGCTGGGCTGGTGTGAAGCGATAGCCCG
CAACCCTCACAGAATCCCAAACGCCACACGGACACCAGAGACTTCAGGGGATGTGGCGGATGCC
TCCCAAACCTCCACGCTGAATGAAAAGTCCCCAGGGCGATCTGCAAGTCGATCAAGTAACATAT
CAAAAGCAAGCAGCCCAACGACAGGGACAGCTCCCAGGAGCCAGTCAAGGTTGTCTGTCTGTCC
ATCTACTCAAGACATCTGCAGATCTTCCATCTTGCATGACATGTCAGAAGATGCATTTGAGCAC
TGCACCCCTGTCATGGTGCTGAGGCACACTAGAAAAGAATCTGGTAAGAAACCAGTAAGACAAA
ATCCTAGGAGGAGGAGAAGGGTCTCTCAGAGATATGAGCATGCAGAAGAGCAAGCCAAGGAGAG
AAGAAACGACTTTCACCTCCAGATCTCAAGTTCAAGGTGGAGAGAACTTGATATGGAGTCTTCA
GATTCATCTTCCACAGATGAGAGTCACGGGATTCAGGCAAAAAGACAAGCCCAGGTTAAAGTCA
GACTGTCTCGGCGAAGGAGAAATAATAAGCCATGTAGAAACTTGGCTGGGTCTTCCATTCCTGA
CAGAATTGGCCTTGTTGATCTGGAATCCAATGGTGCAAAGCACCAAGAGCTGACAGAATGTGGG
AGTCACACTTTAAACATCTGTAGAGGAAAAGTCATAAGGTACCAAGAATGCAGTCATCCACTGC
CAAGCGCATCCTTGGTGGAGAAGACACCCGCAGGGAACCACTCAGGGAGTAAAGGCAAATACTG
TCACAGAGATCCTCAGCCCTTGCATACACTTAGGCAAAAAGAAACAATCAAGAAAAGATTTTCA
GAAACTGATTTCCATACTGAAATCCTGGCAGCTGCAAATGGGAGAGGTTGTGTGGATGGCTCAG
GGCTCCAGCTGAATACCTCTACCCAGAAGTCTCCTGGTGCTGATGATGATGGCTCTGAAAATTT
CGAAGTGTGCAGGATCTGTCACTGCGAAGGAGATGAAGAGAGCCCACTCATCACACCCTGTCGC
TGCACAGGAACCTTGCGCTTTGTCCACCAGTCCTGTCTCCACCAGTGGATCAAGAGCTCAGACA
CACGGTGCTGTGAGCTCTGCAAGTATGACTTCATAATGGAAACCAAGCTCAAGCCCCTGCGGAA
GTGGGAAAAGCTCCAGATGACCACGAGCGAAAGGAGGAAAATATTCTGCTCTGTCACGTTCCAC
GTCATCGCCGTCACCTGCGTGGTGTGGTCCTTGTATGTGTTGATAGACCGGACAGCGGAGGAAA
TCAAGCAAGGTAACGACAATGGTGTGCTGGAGTGGCCATTTTGGACAAAACTGGTTGTGGTGGC
CATCGGCTTCACAGGAGGTCTCGTCTTCATGTATGTACAGTGTAAAGTCTACGTCCAGCTGTGG
CGCAGGCTGAAGGCCTACAACCGTGTGATCTTTGTGCAGAATTGCCCAGACACTGCCAACAAAC
TGGAGAAGAACTTCCCGTGTAATGTGAACACGGAAGGCAAGGATGCTGTGGTTGTGCCTGTGCC
ACAGACAGGTTCGAATACACTGCCAACTGCAGAGGGGGCCCCGCCTGAAGTTATACCAGTCTGA
TGGAACTGGACGGGAACTTCTTCACGGAAGGATCTCTGCAACCCCCAGCCACTACGAACAGAAG
TGCGTCTGCGCTGGTGGCTTCTTGAGCTTCTCGTTTCCCTTACTGACTTGTTTGTCCTGACTTG
GAGCAAAAAGGAAATGAGAAGAAAATAACACGTGACCAGGATCTCAAGAAGCAGAGCCTGCAGT
GGGACCTGGAAAGGTGAAGAATCTTAGGGAAGGAGTTCATAAGGAATGGTTGGTACGAGCCAGT
CTTCCAAGGGGATGGACACGTGATACTCCGAGTAGTGCAGAGGAAATTCCTGAACAGACTTCAA
TTGCAATGTATGCTTCTTTGTAGGGTTCTGTAACGTTAGCCTTCTCCACTGGAAACGACACCCA
CCCACACATTTGGTCTTAAGCCTGAAATTGTGTGCATCATCCCTAAGTCACACCAGAAGTAAAC
TTGGAGGACCTGAGAGGTTTTTTTAAAAAATACTTTTGACAGCTGTTTTTTCTGGCTATTGTGA
AGTCTGGTTATTTTGACAGATGCATGTTTTTAAGTGGATGCAATACACATTTGGGGATAGAAAT
GTTTGGAATTTTGTTTCAATGATGAAGAGATTTTCAGAGCATCGTGAAGTTTAGCTAGAACTGT
TTTTTGAGCAACTATCATGCTGTGGGGTTCTTTCTTGTTGTTGTTGTTGCTGTTGTTGTTTTTT
CTGGTCCCTCTTACACAGTGCTCAACAATAGACATATAACATGAGCTACAAATACAACCACAGT
TGTAAATCTTAAATCTCCTAGTGTGCCCCATTAGGAAAAGTAAAAATAAATAGGTCAATCAATT
TTTATAATTTACTTAACACTATTTATACAAGTTACTTTATGTCATCAATGGAAACAATTATAAA
AATAGCTTTCATTATTTTCTTGAACCAATTCTTCAAAATTCTGCATGGACACCTCAATATGAAT
GAAGTGTGTTGGACAGGACCTAATTAAGAATATCAGCTGCCAGAGCCCTTGGATTAGAAACTGC
ATCTCTGTTTCATTTAAGTTATTTTAAAACAGCAGTTTAATCCATCTTTCTGTTTTGCAGTTTC
ATCTAAAGGTTACGATTTACAAGCACCAAACTCACCAAATTAAGTAACCTGGTTTGATTTCAAC
CAAGTTTCAAAGGGGCGAAAAAATCTAAGGTATAGGAAGTCAGTAAAATGTGTAGCAATGTTAT
GAAGGTAACTTCTGCATAGAAACTATAAAGTAACTATGATAGGGAAATAAACATTTATTTTGCT
ACTAAATCAGGTGTTAAGGATTTTAAATCCACATGAAGTATCAACGTGACACGGGTATCTTAAG
GACCTCAACCCCACGTTTGAACCTGACAGTATTTTCCTCACTCAGCTCATTCAATACATTCCAT
GGTGAGTGATAAGCTGCGTTGTGGGCCCAACACCTGATTACAGCTCTACACAGATTCCAATAAA
CTGATATGAGAACTACCATGAGTGGGTGAATACTCACAAACCGTGACCTGTCAAAACCAGACAG
CCACCTTGTTTTAAAGTGACTTTTGTTGTCGTTGTTAGCTGTCATTATTTATTATCCTGAAAAG
GCAGAGATGGCCATAAAAACCAAAGCATGGGCATCATGTTGCACAACTCTGGGTTCCATATCCA
TGCACTTTGTAATAATCAGTGTTTGTTCTTCGTGGATGATAAAGGAAAAGGAAAAACAAAAGGA
TCCTTCAATGAGAAGAGTATTTGTGGTGATTGACACTGGATCCAAATAGTCCCACCCTTAGAAA
TAGACATAGTAAACAATGTCAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGACATGTATATTCATGTATATATGCAAGAGAAATGTTAAGGTCAAGCCAAGAAACAAAGG
GTTAATACTCATCTTCCTTAAAAGTGTGCAGGAGGGACATGGCGTCAATAGACACAGACAAAGC
AATGGACATGACTGATGTAGACCAGGCCTTCAGCACAAATAAGCAGAACCTTGCATTAACTTCC
TGAAAGGTTCCATTCTAAAGATTTAAGAACAGGAAGAGCAGAGGAAGGGCGGGTGCTCTGTAAG
TTCACACAAAGGCATTAACCATCGTTTAGTTTCTCTGTATAGTTCTCCGCGCGCTTCCTAGGAT
GGCAATTTGTTGTGGACCAGGACTGCACAAGAAGAGGTCTACATCTTCTTGCAAGTAAAGTGCA
AAGTAAAACTGATTTATCTTTTCCCCGCAGAAAATATACCTTACTTACCACAGAAAAAACTATC
TAAAAGCAAGATGGTTATTTGAATAGCTTGTTTCACAGAGGAAGGAGATTGGCTCCATCATATT
TTTCAAGGTGTATACCACCACTAAACTAAACAGAAAAGAGACAAGCTTTGCTACAATGGGGAAA
GACAGCATGCTGCTTTAAAAGTGACAGCTACATGCTGCAGGTTAACTACTGTAAGCTTTGCCTT
TAAATGAGAATGATGGAATTCTACAGTGTATGCACCACTCAGTGATTATGCTGATATCCTCTGA
TGCTTTAAAACTCACAAAAGTTTTTTCCTCTAAATTATTACCTGAATTTACTATTTATGATTCA
AACAATCTGCCCTAACTATTCATGTATATAATAGAGATGTAGGACCCGTACTCCTAATATTTGA
GAAGTTTAGGACTTCAGGGGTATCCCAAATTAAAGCCAGCCCAGACTACATGAGACCTTTCTCC
AAAAGTAAAACAAAGATTTTAAACTCAATGAATAAAGCCAGTATTAAAAACATCTCTTCATATT
GTGTGGTAATGGTGTTTTCTCCTAATAACCATGAAAAGGTTTGGCATTGATGGCCTGACATACT
GCTCAAAGAGAAAAAAGAATGGCATTATCTTGAAGTGTGTTTACCTGCTTTCATGTAAAAAATA
AAGTGAAATTGAA

hide sequence

RefSeq Acc Id:

XM_017600176 ⟹ XP_017455665

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	28,022,159 - 28,880,872 (-)	NCBI
mRatBN7.2	16	23,255,554 - 24,114,290 (-)	NCBI
Rnor_6.0	16	24,998,709 - 25,378,800 (-)	NCBI

Sequence:

show sequence

CTGGTGTAGGAAACTCTTTTTGTATGTTAACAATGTATGCTTTGAAAAGATGCACTTTTTACAC
TATGCAGTGGCTCTGGGACAAGATTATTAATAATTGGTAATCCTTATTTCTTCTCCATGATTTC
TAGTTAAAGTAAAACCTCTCCATTAGTATTTCATTCAAATTTGGGGATTAAAACATTTCAATTA
TATGTATTTTCCAGACCATAACTATGAGAAATGATGTGTTTCAGGGAATGTAAATTATTTTCAG
AATTTCAGGAATTGAAAGGGGAAAAGAGGAAGGAAACAATGCTGGGCTGGTGTGAAGCGATAGC
CCGCAACCCTCACAGAATCCCAAACGCCACACGGACACCAGAGACTTCAGGGGATGTGGCGGAT
GCCTCCCAAACCTCCACGCTGAATGAAAAGTCCCCAGGGCGATCTGCAAGTCGATCAAGTAACA
TATCAAAAGCAAGCAGCCCAACGACAGGGACAGCTCCCAGGAGCCAGTCAAGGTTGTCTGTCTG
TCCATCTACTCAAGACATCTGCAGATCTTCCATCTTGCATGACATGTCAGAAGATGCATTTGAG
CACTGCACCCCTGTCATGGTGCTGAGGCACACTAGAAAAGAATCTGGTAAGAAACCAGTAAGAC
AAAATCCTAGGAGGAGGAGAAGGGTCTCTCAGAGATATGAGCATGCAGAAGAGCAAGCCAAGGA
GAGAAGAAACGACTTTCACCTCCAGATCTCAAGTTCAAGGTGGAGAGAACTTGATATGGAGTCT
TCAGATTCATCTTCCACAGATGAGAGTCACGGGATTCAGGCAAAAAGACAAGCCCAGGTTAAAG
TCAGACTGTCTCGGCGAAGGAGAAATAATAAGCCATGTAGAAACTTGGCTGGGTCTTCCATTCC
TGACAGAATTGGCCTTGTTGATCTGGAATCCAATGGTGCAAAGCACCAAGAGCTGACAGAATGT
GGGAGTCACACTTTAAACATCTGTAGAGGAAAAGTCATAAGGTACCAAGAATGCAGTCATCCAC
TGCCAAGCGCATCCTTGGTGGAGAAGACACCCGCAGGGAACCACTCAGGGAGTAAAGGCAAATA
CTGTCACAGAGATCCTCAGCCCTTGCATACACTTAGGCAAAAAGAAACAATCAAGAAAAGATTT
TCAGAAACTGATTTCCATACTGAAATCCTGGCAGCTGCAAATGGGAGAGGTTGTGTGGATGGCT
CAGGGCTCCAGCTGAATACCTCTACCCAGAAGTCTCCTGGTGCTGATGATGATGGCTCTGAAAA
TTTCGAAGTGTGCAGGATCTGTCACTGCGAAGGAGATGAAGAGAGCCCACTCATCACACCCTGT
CGCTGCACAGGAACCTTGCGCTTTGTCCACCAGTCCTGTCTCCACCAGTGGATCAAGAGCTCAG
ACACACGGTGCTGTGAGCTCTGCAAGTATGACTTCATAATGGAAACCAAGCTCAAGCCCCTGCG
GAAGTGGGAAAAGCTCCAGATGACCACGAGCGAAAGGAGGAAAATATTCTGCTCTGTCACGTTC
CACGTCATCGCCGTCACCTGCGTGGTGTGGTCCTTGTATGTGTTGATAGACCGGACAGCGGAGG
AAATCAAGCAAGGTGTGCTGGAGTGGCCATTTTGGACAAAACTGGTTGTGGTGGCCATCGGCTT
CACAGGAGGTCTCGTCTTCATGTATGTACAGTGTAAAGTCTACGTCCAGCTGTGGCGCAGGCTG
AAGGCCTACAACCGTGTGATCTTTGTGCAGAATTGCCCAGACACTGCCAACAAACTGGAGAAGA
ACTTCCCGTGTAATGTGAACACGGAAGGCAAGGATGCTGTGGTTGTGCCTGTGCCACAGACAGG
TTCGAATACACTGCCAACTGCAGAGGGGGCCCCGCCTGAAGTTATACCAGTCTGATGGAACTGG
ACGGGAACTTCTTCACGGAAGGATCTCTGCAACCCCCAGCCACTACGAACAGAAGTGCGTCTGC
GCTGGTGGCTTCTTGAGCTTCTCGTTTCCCTTACTGACTTGTTTGTCCTGACTTGGAGCAAAAA
GGAAATGAGAAGAAAATAACACGTGACCAGGATCTCAAGAAGCAGAGCCTGCAGTGGGACCTGG
AAAGGTGAAGAATCTTAGGGAAGGAGTTCATAAGGAATGGTTGGTACGAGCCAGTCTTCCAAGG
GGATGGACACGTGATACTCCGAGTAGTGCAGAGGAAATTCCTGAACAGACTTCAATTGCAATGT
ATGCTTCTTTGTAGGGTTCTGTAACGTTAGCCTTCTCCACTGGAAACGACACCCACCCACACAT
TTGGTCTTAAGCCTGAAATTGTGTGCATCATCCCTAAGTCACACCAGAAGTAAACTTGGAGGAC
CTGAGAGGTTTTTTTAAAAAATACTTTTGACAGCTGTTTTTTCTGGCTATTGTGAAGTCTGGTT
ATTTTGACAGATGCATGTTTTTAAGTGGATGCAATACACATTTGGGGATAGAAATGTTTGGAAT
TTTGTTTCAATGATGAAGAGATTTTCAGAGCATCGTGAAGTTTAGCTAGAACTGTTTTTTGAGC
AACTATCATGCTGTGGGGTTCTTTCTTGTTGTTGTTGTTGCTGTTGTTGTTTTTTCTGGTCCCT
CTTACACAGTGCTCAACAATAGACATATAACATGAGCTACAAATACAACCACAGTTGTAAATCT
TAAATCTCCTAGTGTGCCCCATTAGGAAAAGTAAAAATAAATAGGTCAATCAATTTTTATAATT
TACTTAACACTATTTATACAAGTTACTTTATGTCATCAATGGAAACAATTATAAAAATAGCTTT
CATTATTTTCTTGAACCAATTCTTCAAAATTCTGCATGGACACCTCAATATGAATGAAGTGTGT
TGGACAGGACCTAATTAAGAATATCAGCTGCCAGAGCCCTTGGATTAGAAACTGCATCTCTGTT
TCATTTAAGTTATTTTAAAACAGCAGTTTAATCCATCTTTCTGTTTTGCAGTTTCATCTAAAGG
TTACGATTTACAAGCACCAAACTCACCAAATTAAGTAACCTGGTTTGATTTCAACCAAGTTTCA
AAGGGGCGAAAAAATCTAAGGTATAGGAAGTCAGTAAAATGTGTAGCAATGTTATGAAGGTAAC
TTCTGCATAGAAACTATAAAGTAACTATGATAGGGAAATAAACATTTATTTTGCTACTAAATCA
GGTGTTAAGGATTTTAAATCCACATGAAGTATCAACGTGACACGGGTATCTTAAGGACCTCAAC
CCCACGTTTGAACCTGACAGTATTTTCCTCACTCAGCTCATTCAATACATTCCATGGTGAGTGA
TAAGCTGCGTTGTGGGCCCAACACCTGATTACAGCTCTACACAGATTCCAATAAACTGATATGA
GAACTACCATGAGTGGGTGAATACTCACAAACCGTGACCTGTCAAAACCAGACAGCCACCTTGT
TTTAAAGTGACTTTTGTTGTCGTTGTTAGCTGTCATTATTTATTATCCTGAAAAGGCAGAGATG
GCCATAAAAACCAAAGCATGGGCATCATGTTGCACAACTCTGGGTTCCATATCCATGCACTTTG
TAATAATCAGTGTTTGTTCTTCGTGGATGATAAAGGAAAAGGAAAAACAAAAGGATCCTTCAAT
GAGAAGAGTATTTGTGGTGATTGACACTGGATCCAAATAGTCCCACCCTTAGAAATAGACATAG
TAAACAATGTCAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACAT
GTATATTCATGTATATATGCAAGAGAAATGTTAAGGTCAAGCCAAGAAACAAAGGGTTAATACT
CATCTTCCTTAAAAGTGTGCAGGAGGGACATGGCGTCAATAGACACAGACAAAGCAATGGACAT
GACTGATGTAGACCAGGCCTTCAGCACAAATAAGCAGAACCTTGCATTAACTTCCTGAAAGGTT
CCATTCTAAAGATTTAAGAACAGGAAGAGCAGAGGAAGGGCGGGTGCTCTGTAAGTTCACACAA
AGGCATTAACCATCGTTTAGTTTCTCTGTATAGTTCTCCGCGCGCTTCCTAGGATGGCAATTTG
TTGTGGACCAGGACTGCACAAGAAGAGGTCTACATCTTCTTGCAAGTAAAGTGCAAAGTAAAAC
TGATTTATCTTTTCCCCGCAGAAAATATACCTTACTTACCACAGAAAAAACTATCTAAAAGCAA
GATGGTTATTTGAATAGCTTGTTTCACAGAGGAAGGAGATTGGCTCCATCATATTTTTCAAGGT
GTATACCACCACTAAACTAAACAGAAAAGAGACAAGCTTTGCTACAATGGGGAAAGACAGCATG
CTGCTTTAAAAGTGACAGCTACATGCTGCAGGTTAACTACTGTAAGCTTTGCCTTTAAATGAGA
ATGATGGAATTCTACAGTGTATGCACCACTCAGTGATTATGCTGATATCCTCTGATGCTTTAAA
ACTCACAAAAGTTTTTTCCTCTAAATTATTACCTGAATTTACTATTTATGATTCAAACAATCTG
CCCTAACTATTCATGTATATAATAGAGATGTAGGACCCGTACTCCTAATATTTGAGAAGTTTAG
GACTTCAGGGGTATCCCAAATTAAAGCCAGCCCAGACTACATGAGACCTTTCTCCAAAAGTAAA
ACAAAGATTTTAAACTCAATGAATAAAGCCAGTATTAAAAACATCTCTTCATATTGTGTGGTAA
TGGTGTTTTCTCCTAATAACCATGAAAAGGTTTGGCATTGATGGCCTGACATACTGCTCAAAGA
GAAAAAAGAATGGCATTATCTTGAAGTGTGTTTACCTGCTTTCATGTAAAAAATAAAGTGAAAT
TGAA

hide sequence

RefSeq Acc Id:

XM_039094632 ⟹ XP_038950560

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	28,022,159 - 28,880,868 (-)	NCBI
mRatBN7.2	16	23,255,554 - 24,114,286 (-)	NCBI

RefSeq Acc Id:

XM_039094633 ⟹ XP_038950561

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	28,022,159 - 28,880,351 (-)	NCBI
mRatBN7.2	16	23,255,554 - 24,113,537 (-)	NCBI

RefSeq Acc Id:

XM_039094634 ⟹ XP_038950562

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	28,022,159 - 28,880,868 (-)	NCBI
mRatBN7.2	16	23,255,554 - 24,114,286 (-)	NCBI

RefSeq Acc Id:

XM_039094635 ⟹ XP_038950563

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	28,022,159 - 28,880,853 (-)	NCBI
mRatBN7.2	16	23,255,554 - 24,114,270 (-)	NCBI

RefSeq Acc Id:

XM_063275512 ⟹ XP_063131582

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	28,022,159 - 28,880,577 (-)	NCBI

RefSeq Acc Id:

XM_063275513 ⟹ XP_063131583

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	28,023,292 - 28,110,972 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001129310	(Get FASTA)	NCBI Sequence Viewer
	NP_001388434	(Get FASTA)	NCBI Sequence Viewer
	XP_008769356	(Get FASTA)	NCBI Sequence Viewer
	XP_017455664	(Get FASTA)	NCBI Sequence Viewer
	XP_017455665	(Get FASTA)	NCBI Sequence Viewer
	XP_038950560	(Get FASTA)	NCBI Sequence Viewer
	XP_038950561	(Get FASTA)	NCBI Sequence Viewer
	XP_038950562	(Get FASTA)	NCBI Sequence Viewer
	XP_038950563	(Get FASTA)	NCBI Sequence Viewer
	XP_063131582	(Get FASTA)	NCBI Sequence Viewer
	XP_063131583	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL75966	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000092175
	ENSRNOP00000092175.2
	ENSRNOP00000100848
	ENSRNOP00000100848.1
	ENSRNOP00000101945
	ENSRNOP00000101945.1
	ENSRNOP00000102883
	ENSRNOP00000102883.1

RefSeq Acc Id:	NP_001129310 ⟸ NM_001135838
- Peptide Label:	isoform 2
- UniProtKB:	D4A6K8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPLHQISVIPARETASNGRSSMGRNKEKNKEVENEKSPGRSASRSSNISKASSPTTGTAPRSQS RLSVCPSTQDICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDFIM ETKLKPLRKWEKLQMTTSERRKIFCSVTFHVIAVTCVVWSLYVLIDRTAEEIKQGNDNGVLEWP FWTKLVVVAIGFTGGLVFMYVQCKVYVQLWRRLKAYNRVIFVQNCPDTANKLEKNFPCNVNTEG KDAVVVPVPQTGSNTLPTAEGAPPEVIPV hide sequence

RefSeq Acc Id:

XP_008769356 ⟸ XM_008771134

- Peptide Label:

isoform X5

- Sequence:

show sequence

MMCFRECKLFSEFQELKGEKRKETMLGWCEAIARNPHRIPNATRTPETSGDVADASQTSTLNEK
SPGRSASRSSNISKASSPTTGTAPRSQSRLSVCPSTQDICRICHCEGDEESPLITPCRCTGTLR
FVHQSCLHQWIKSSDTRCCELCKYDFIMETKLKPLRKWEKLQMTTSERRKIFCSVTFHVIAVTC
VVWSLYVLIDRTAEEIKQGVLEWPFWTKLVVVAIGFTGGLVFMYVQCKVYVQLWRRLKAYNRVI
FVQNCPDTANKLEKNFPCNVNTEGKDAVVVPVPQTGSNTLPTAEGAPPEVIPV

hide sequence

RefSeq Acc Id:

XP_017455665 ⟸ XM_017600176

- Peptide Label:

isoform X2

- Sequence:

show sequence

MMCFRECKLFSEFQELKGEKRKETMLGWCEAIARNPHRIPNATRTPETSGDVADASQTSTLNEK
SPGRSASRSSNISKASSPTTGTAPRSQSRLSVCPSTQDICRSSILHDMSEDAFEHCTPVMVLRH
TRKESGKKPVRQNPRRRRRVSQRYEHAEEQAKERRNDFHLQISSSRWRELDMESSDSSSTDESH
GIQAKRQAQVKVRLSRRRRNNKPCRNLAGSSIPDRIGLVDLESNGAKHQELTECGSHTLNICRG
KVIRYQECSHPLPSASLVEKTPAGNHSGSKGKYCHRDPQPLHTLRQKETIKKRFSETDFHTEIL
AAANGRGCVDGSGLQLNTSTQKSPGADDDGSENFEVCRICHCEGDEESPLITPCRCTGTLRFVH
QSCLHQWIKSSDTRCCELCKYDFIMETKLKPLRKWEKLQMTTSERRKIFCSVTFHVIAVTCVVW
SLYVLIDRTAEEIKQGVLEWPFWTKLVVVAIGFTGGLVFMYVQCKVYVQLWRRLKAYNRVIFVQ
NCPDTANKLEKNFPCNVNTEGKDAVVVPVPQTGSNTLPTAEGAPPEVIPV

hide sequence

RefSeq Acc Id:	XP_017455664 ⟸ XM_017600175
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6AH31 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMCFRECKLFSEFQELKGEKRKETMLGWCEAIARNPHRIPNATRTPETSGDVADASQTSTLNEK SPGRSASRSSNISKASSPTTGTAPRSQSRLSVCPSTQDICRSSILHDMSEDAFEHCTPVMVLRH TRKESGKKPVRQNPRRRRRVSQRYEHAEEQAKERRNDFHLQISSSRWRELDMESSDSSSTDESH GIQAKRQAQVKVRLSRRRRNNKPCRNLAGSSIPDRIGLVDLESNGAKHQELTECGSHTLNICRG KVIRYQECSHPLPSASLVEKTPAGNHSGSKGKYCHRDPQPLHTLRQKETIKKRFSETDFHTEIL AAANGRGCVDGSGLQLNTSTQKSPGADDDGSENFEVCRICHCEGDEESPLITPCRCTGTLRFVH QSCLHQWIKSSDTRCCELCKYDFIMETKLKPLRKWEKLQMTTSERRKIFCSVTFHVIAVTCVVW SLYVLIDRTAEEIKQGNDNGVLEWPFWTKLVVVAIGFTGGLVFMYVQCKVYVQLWRRLKAYNRV IFVQNCPDTANKLEKNFPCNVNTEGKDAVVVPVPQTGSNTLPTAEGAPPEVIPV hide sequence

Ensembl Acc Id:

ENSRNOP00000038896 ⟸ ENSRNOT00000032289

RefSeq Acc Id:	XP_038950560 ⟸ XM_039094632
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6AH31 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038950562 ⟸ XM_039094634
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038950563 ⟸ XM_039094635
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6AQF1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038950561 ⟸ XM_039094633
- Peptide Label:	isoform X3

Ensembl Acc Id:

ENSRNOP00000092175 ⟸ ENSRNOT00000110592

Ensembl Acc Id:

ENSRNOP00000096247 ⟸ ENSRNOT00000082578

RefSeq Acc Id:	NP_001388434 ⟸ NM_001401505
- Peptide Label:	isoform 1

RefSeq Acc Id:	XP_063131582 ⟸ XM_063275512
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063131583 ⟸ XM_063275513
- Peptide Label:	isoform X6
- UniProtKB:	A6KFM4 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000102883 ⟸ ENSRNOT00000148808

Ensembl Acc Id:

ENSRNOP00000100848 ⟸ ENSRNOT00000160934

Ensembl Acc Id:

ENSRNOP00000101945 ⟸ ENSRNOT00000157784

Protein Domains

RING-CH-type RING-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A6K8-F1-model_v2	AlphaFold	D4A6K8	1-254	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1305148	AgrOrtholog
BioCyc Gene	G2FUF-11656	BioCyc
Ensembl Genes	ENSRNOG00000026310	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000110592	ENTREZGENE
	ENSRNOT00000110592.2	UniProtKB/TrEMBL
	ENSRNOT00000148808	ENTREZGENE
	ENSRNOT00000148808.1	UniProtKB/TrEMBL
	ENSRNOT00000157784	ENTREZGENE
	ENSRNOT00000157784.1	UniProtKB/TrEMBL
	ENSRNOT00000160934	ENTREZGENE
	ENSRNOT00000160934.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.40.10	UniProtKB/TrEMBL
InterPro	Znf_RING	UniProtKB/TrEMBL
	Znf_RING-CH	UniProtKB/TrEMBL
	Znf_RING/FYVE/PHD	UniProtKB/TrEMBL
NCBI Gene	361135	ENTREZGENE
PANTHER	LD02310P	UniProtKB/TrEMBL
Pfam	RINGv	UniProtKB/TrEMBL
PhenoGen	Marchf1	PhenoGen
PROSITE	ZF_RING_2	UniProtKB/TrEMBL
	ZF_RING_CH	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000026310	RatGTEx
SMART	RINGv	UniProtKB/TrEMBL
Superfamily-SCOP	RING/U-box	UniProtKB/TrEMBL
UniProt	A0A8I6AH31	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AQF1	ENTREZGENE
	A0ABK0LC28_RAT	UniProtKB/TrEMBL
	A0ABK0LNP1_RAT	UniProtKB/TrEMBL
	A0ABK0LR33_RAT	UniProtKB/TrEMBL
	A6KFM4	ENTREZGENE, UniProtKB/TrEMBL
	D4A6K8	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-03-09	Marchf1	membrane associated ring-CH-type finger 1	LOC100910061	E3 ubiquitin-protein ligase MARCH1-like	Data merged from RGD:6500479	737654	PROVISIONAL
2019-08-08	Marchf1	membrane associated ring-CH-type finger 1	March1	membrane associated ring-CH-type finger 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2015-12-02	March1	membrane associated ring-CH-type finger 1	March1	membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2012-10-05	March1	membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase	March1	membrane-associated ring finger (C3HC4) 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2012-07-05	LOC100910061	E3 ubiquitin-protein ligase MARCH1-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-04-30	March1	membrane-associated ring finger (C3HC4) 1	March1_predicted	membrane-associated ring finger (C3HC4) 1 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	March1_predicted	membrane-associated ring finger (C3HC4) 1 (predicted)	RGD1305148_predicted	similar to hypothetical protein FLJ20668 (predicted)	Symbol and Name updated	1299863	APPROVED
2005-01-20	RGD1305148_predicted	similar to hypothetical protein FLJ20668 (predicted)	LOC361135_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC361135_predicted	similar to hypothetical protein FLJ20668 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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